ID:

dvi_4037

 Coordinate:

scaffold_12855:5582059-5582209 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.9 -10.9 -10.7

Flybase annnotation

exon [dvir_GLEANR_10212:4]; CDS [Dvir\GJ10278-cds]; intron [Dvir\GJ10278-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_4578:1824-1843 -
  2. scaffold_11473:64-83 -
  3. scaffold_12472:369353-369372 -
  4. scaffold_12822:2039635-2039654 -
  5. scaffold_12823:2209480-2209499 -
  6. scaffold_12855:3613075-3613094 -
  7. scaffold_12928:3573740-3573759 -
  8. scaffold_12928:5088981-5089000 -
  9. scaffold_12963:15580369-15580388 -
  10. scaffold_12970:3748382-3748401 -
  11. scaffold_12970:6410195-6410214 -
  12. scaffold_12970:7173446-7173465 -
  13. scaffold_13042:758799-758818 -
  14. scaffold_13042:4495296-4495315 -
  15. scaffold_13047:5501333-5501352 -
  16. scaffold_13047:18528360-18528379 -
  17. scaffold_13049:8954173-8954192 -
  18. scaffold_13049:10318764-10318783 -
  19. scaffold_13246:677385-677404 -
  20. scaffold_13324:2886594-2886613 -
  21. scaffold_598:77-96 -
  22. scaffold_9851:3811-3830 -
  23. scaffold_9851:4586-4605 -
  24. scaffold_10174:646-665 -
  25. scaffold_12723:1368467-1368486 -
  26. scaffold_12726:1139926-1139945 -
  27. scaffold_12766:3402-3421 -
  28. scaffold_12815:512562-512581 -
  29. scaffold_12855:3006969-3006988 -
  30. dvi_4037  scaffold_12855:5582137-5582156 -
  31. scaffold_12855:6120053-6120072 -
  32. scaffold_12875:10476451-10476470 -
  33. scaffold_12970:4299713-4299732 -
  34. scaffold_12970:10242529-10242548 -
  35. scaffold_13042:2506098-2506117 -
  36. scaffold_13047:6133832-6133851 -
  37. scaffold_13047:8046685-8046704 -
  38. scaffold_13049:20447190-20447209 -
  39. scaffold_13323:94336-94355 -
  40. scaffold_13324:1580477-1580496 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAATAGCCAATTTTTGGTTTATTTGTTGGCACGCGGATTATCGGGGATTTATTCCACTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACGCACACACGATTGACTGACAGGCCTTGAGGGTATTGGTAATTGAATATTTTGGTTGAATTCTCTTCCCTAATTTATTCAGATACTGTGGCGTCATCGATGCCAAGAATATTGGCCTGGTCACATCCATAG
**************************************************....................................................................................(((((...((((...)))).)))))..(((((((..((((..(((.....))).))))..)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 SRR060672
9x160_females_carcasses_total
 SRR060655
9x160_testes_total
 V047
embryo
 M028
head
 M047
female body
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
.....................................................................................................................................................................................................................CATCGATGCCAAGGATATGAGCC............... 23 3 2 1.00 2 2 0 0 0 0 0 0 0
.............................................................................................................................ACACGGTTGTCTGACAGACC.......................................................................................................... 20 3 2 0.50 1 0 0 1 0 0 0 0 0
............................................................................................................................................CGGCCCTGATGGTATTGGTA........................................................................................... 20 3 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................................................................ATTGACGGAAAGGCCTTGGG..................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................ATTCAGATACTCTGTCTTCAT................................... 21 3 9 0.11 1 0 0 0 1 0 0 0 0
.......................................................................................................ACACACACACACACACACGC................................................................................................................................ 20 0 20 0.05 1 0 0 0 0 0 0 1 0
..................................................................................................................................CTTGGCGGACAGGCCTTG....................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1
................................................................................................................................................................ATTTAGGATTTTGGTTGAATT...................................................................... 21 3 20 0.05 1 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................CAGTTCCTGTGGAGTCATC.................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

CTTATCGGTTAAAAACCAAATAAACAACCGTGCGCCTAATAGCCCCTAAATAAGGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCTAACTGACTGTCCGGAACTCCCATAACCATTAACTTATAAAACCAACTTAAGAGAAGGGATTAAATAAGTCTATGACACCGCAGTAGCTACGGTTCTTATAACCGGACCAGTGTAGGTATC
**************************************************....................................................................................(((((...((((...)))).)))))..(((((((..((((..(((.....))).))))..)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 SRR1106721
embryo_10-12h
 SRR060662
9x160_0-2h_embryos_total
 V047
embryo
 SRR060666
160_males_carcasses_total
 SRR060658
140_ovaries_total
 SRR060657
140_testes_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 V053
head
 SRR060660
Argentina_ovaries_total
 GSM1528803
follicle cells		 M061
embryo
 SRR060655
9x160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060679
140x9_testes_total
 SRR1106715
embryo_4-6h
 V116
male body
.................................................................................................................................CTAACTGACTGTCTCGAACTC..................................................................................................... 21 2 2 1.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CTAAATAAGGTGAGT............................................................................................................................................................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TGAAGGGAAGGCATTAAATAAG.................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AGGGAAGGGATTGAATAAG.................................................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCTATGACTCCGGAGTG................................... 18 3 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGTGTGTGTGTGTGTGTGTGT....................................................................................................................................................... 21 0 20 0.30 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTAACAGACTGTCTCGAACTC..................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CCGGAGTAGCTACAGTTCT........................ 19 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAGAGCAGGGATTAAGTCAG.................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................ATAAGCTGAGTGTCTGTGT....................................................................................................................................................................................... 19 2 11 0.18 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................CTAAATAAGGTTAGT............................................................................................................................................................................................... 15 1 20 0.15 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................GTGTGTGTGTGTGTGTGTGTG.......................................................................................................................................... 21 0 20 0.15 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
..............................................................GTGTGTGTGTGTGTGTGTGTGTG...................................................................................................................................................................... 23 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................AGGGAATGGATTAAATAAG.................................................... 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................TGTGTGTGTGTGTGTGTG.................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................GTGTGTGTGTGTGTGTGTGTGTG.......................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................TGTGTGTGTGTGTGCGTGTGTTCTA....................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................GTGTGTGTGTGTGTGTGTGTGTGC................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................GAGTGTGTGTGTGTGTGTGT............................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................GTGTGTGTGTGCGTGTGTGC......................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................GTGTGTGTGAGTGCGTGTGTGC......................................................................................................................... 22 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AAAAGGGATTAAATAAGTGC................................................. 20 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:5582009-5582259 - dvi_4037 GAATAGCCAATTTTTGGTTTATTTGTTGGCACGCGGATTATCGGGG----ATTTATTCCA---C----TCACA--CAC--------------------------ACAC--A----------------------CACACAC------ACACACAC------ACAC--ACAC------AC------------ACAC-------------------------------------------AC------ACAC--------------------AC------AC----AC------AC----ACACACACGCAC------------AC--AC-------------GATTGACTGACAGG-------------CCTTGAGGGTATTGGTAATTGAATAT--------TT------------------TGG--------T---TGAATT-------------CTCTTCC-----C----T------AATTTA-------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------C----AGATACT-GTGGCGTCATCGATGCCAAGAATATTGGCCTGGTCACATCCATAG
droMoj3 scaffold_6540:5904774-5904981 - GAATAGCCAATTTAAGGTTTATTTGTTGGCACATGGATTATCGGGG----ATTTATGCAA-----------------------------------------------T--G--------------------CACACACTTCC----ACACCCACAC----------ATATAT----AA--------AT-------------------------------------------------TC------C--------------------------------------C------------------------ATCC------AC---------------------------C-----CTGC-----------TGGAGGGTATTGGTAATTGAATAT--------TTT---------------CGC----------C---TGCCGT-------------CTCGT------------T------CATTCG-------------------------------------------------------------------------------------------------------AA---------------------------------------------------------------------T----AGATACT-GTGGCGTCATCGATGCCAAGAATATTGGCCTGGTCACCTCCATCG
droGri2 scaffold_14906:8416704-8416936 + GAATATCCAATTTTCGGTTTATTTGTTAGCACGCGGATTATCGGGG----ATTTT---GTTCT-----TCACA--TACTC---------------TC-----------------TCTGTAT--------------C----------ACGTACACAC----------ACACAC----ACACACACAAAC--GG---------------------------------------------ACAGACATG----------------------------------CACCT-------TTG----TG----------------------------------------ACTGACTGACAGGA---ACTGC--------GAGGGTATTGGTAATTGAATAT--------TT----------------CTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC--TT----C--TT--------------------T----AGATATT-GTGGGGTCATCGATGCCAAAAATATTGGCCTGGTCACCTCCATCG
droWil2 scf2_1100000013754:884-1064 + CCC-------------------------------------------------------CA-----------CA----------------------------------GTCA----------------CACACACACACACAC--------ACACAC--ACAC----ACACAC----AC----AC--AC--AC---------------------------------------------ACAGAC----------------------------------------T---------------------------------------------------------------CGGGAAAA---AGTGC--------GGACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCCTTCGTCTG------------------TGTT------------TTTTTCAAGTTTGAACGTTTTCCCTCCTGAAATTTAGGA--AC------------------------------------------TTTTGGTATCGCCGGTGTCAAGTGCAAGTGTCTACTCACG------T
dp5 XL_group1a:1608871-1609041 + GCC-------------------------------------------------------CA-----------CA--GGTAAACGGTGAATGAAC-----------ACAC--G--------------------CACGCACACAC----ACATACACAC----------ACACAC----ACACACTAAAACGCAT----------------GAGTAAGCTAAGGAAAC--------ACACACACACAAA----------------------------------TAA-C------ACTC----AC--ACG------------------------------------------------C---ACAGG--------GAGGG-------------------------------------------------------GGGGC---CTT---------------------------------------------------------------------------------------------------------GGGCAATTTCATTTTCCGCTTAG----CTCT-T------------------------------------------AC---------------------------------------------------------------------------------------ACAATT
droPer2 scaffold_15:1026262-1026437 + TTC-------------------------------------------------------CC---CACACACAC--------------------------------ACAC--A----------------------CACACAC----------ACACAC----------ACACAC----AG--------AT--ACACAGACCACAAACCACAAATAAACGAGAAAAAGTTAGATACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT-----------A----------------------A-----G----C------CATAA-C----GAAGTTGAGAGCAGAAAACACAAATA-----ATTTT---------TATTAAATTTCGTTTC------------------AGTT------------TTATC---------------------------------------------------------------------C----AAGCGAT-GCGGCATCGTC----------------------------------
droAna3 scaffold_13248:664839-665022 + GGA-------------------------------------------------------CC-----------CA-----------------------TTCATGTCACAC--A--------------------CACACACACACAAATACCAACACAA----------ACACAC----ACACAAACACTC-------------------------------------------------ACAC------------------------------------------------------------------------------AC---------------------------C-----AATT---TC--------GTAATCACTCAAAAT-----------------T---------------GTTTG--------G---CAA--------------ACATTTCAA-----G----C------TATTT-T----GAAGC--------------------A-----ATTTT---------TAGCCAATTTTTGGGCAATTTTTATTCCCAAAAAA----CTCA-C------------------------------------------AA--AC------------------------------------------TT-TTACTTCA-----------------------------------T
droBip1 scf7180000394714:115394-115578 - TTG----------TTGTTTTTTTTTGTGGCATGTTGTTGTTTGA---------------------------TA--TGTCAAGGTTA----AGCA-----------CAC--G--------------------CACACCTACAC----CT--ACACAC----------ACACAC----AC-----------------------------------------------------------------------ACTCGTACAAAAATATACACAC------GC----AT------------------------------------ACACAC---TAATA------------CA-----GGTT---T-------------------------ATGTATCTTTATAATTT---------------CTTGT--------T---TTAATT-------------TTTTTAT-----T----T------TATTT-T------TCC--------------------G-----ATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCG
droKik1 scf7180000302808:423753-423929 + ACA-------------------------------------------------------AA-----------TA--------------------------------CAC--A--------------------CACACACACAC----ACACACACAC----------ACACAC----ACACACAC--AC--AC---------------------------------------------ACAGACAAT----------------------------------CCA-C------AATC----AC----------------------------------------AC----TGGC---------AAACACTCA--------------------------------------------------------------------------------------------------------------TTCTG-T----GAGTGTAATTG---------TGTCTTTGTTATGT---ATT-------------CTTATTTT------------------TATTTTG------------CT-----------------------TACAT----------TTGCAACATTTTTGACTGCCGCCTTTGTTG-----------------GCCCCG-----------------------------------T
droFic1 scf7180000453201:281317-281473 - TTT-------------------------------------------------------CA---C----TCACA---------------------------AGC-AAAC--G----------------------CACTCTT----------ACACAC--ACACAC--AAGT--------------------ACAA--------AC---------------------------------AC------ACAC--------------------TC------AC----AC------AC----ACAA-----------------------------TAACG------------AAGAAA----------------------------------------------------------------------A-TTGTGTCGTGG---CCTTGCTGAGGCTAACAATTGTTGT---------------T-----------------------------------------ATTGTT---------GTTAAGTTTC-------------------------------------------------------------CCCCCTTGTATT----------------------------------------TAGTT---------CGCCACTA-----------------------------------T
droEle1 scf7180000491087:213661-213826 + TTT-----------CTG-----------ACA---------------------------C---------ACACA----------------------------------CACA----------------------CACACACAC----AC--ACACAC----AC----ACACAC----ACACACAC--AC--AC---------------------------------------------ACACAC------------------------ACACACACACA------C------AC----ACAC------AC--ACACACACA---------------------------CA-----C--------------------------------------C---ACGGAT-CCAGAGTGTACAAAAGCAAA-TTTTCTGGTTT---CATTG-------------CAA------------C------CATTCA------------------------------------------------------------------------------------------A------------AC-----------------------TGTAA----------T------------------------------C----AG---------ATACTA-----------------------------------T
droRho1 scf7180000777097:180973-181128 + TTT-----------CGGTTCATTT-TTGGCAAAGGGCAACTTAAAA---AGTTTGCCCCA---G----CTAAACAAGTTG----------------------------------ATGCCAACAAACATACGCACACACGTAC----ACTAACTCAC----------ACACAC----ACACACAC--AC--ACACATGCTTAAAAGTAAGGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAGAGGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------C------------------------------------------TT-TTGGTTGA-----------------------------------A
droBia1 scf7180000301506:3077803-3077942 - CAC-----------------------------------------------------------------GCATA----------------------------------CACACCCACACCAA--------------C----------ACCAACACCA----------ACACAC----ACATGAACACAC-------------------------------------------------ACAC--------AG--------AAAC------A--------------C------AA----ACACAC----AC------------AC--AC---GAG--------------CG------------------------------------------------------------------------------GTGTTGGGC---CCTGGTTGACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACTCTTTTTGATTGACCTCTCTGGTTGCAGTT---------------CC-----------------------------------T
droTak1 scf7180000415262:134637-134789 - CAC-----------------------------------------------------------------TCACA--CAGCCACATAG----AACCCACACAAG---------------------------------------------------CAC----AC----GCACAC----ACACACACCCAGACAC--------CGAG--------A-------------------------C------AC--------------------ACAC------ACACACCC------------------------ACACACCCACA---------------------------CC-----C--------------------------------------C---ACGAACACCACAA---GGACAAGCAAATTT-----------AA-----------------------------------------C---------------------------------------GTTATC---------ATTTAATTTC---------------------------------CCATTTT--------------------------------------------------------------------------GATA---------------CA-----------------------------------T
droEug1 scf7180000408176:673488-673644 + CAC-----------------------------------------------------------------ACACA----------------------------------CACA----------------------CACACACAC--------ACACAC--ACAC----ACATAC----AC-----------------------------------------------------------AT------GCAC------ACAAACAC------AC------------AA------AAAC----GC------AC------------ACATAT---TA-------------------------------------------------ATAGCTAAATATCTGGATAAATACTCTCG---GAACTTTTGGATTT-----------AA-----------------------------------------T--------------------------------------ATTCGATACGAATTCG-----------GT-------------------------TGCTCCAATTTG--AT---------------------------------------------------------------------T----ATAT------------------------------------------------A
dm3 chr3L:11247754-11247915 + TTT-------------------------------------------------------AA-----------TA--------------------------------CAC--A--------------------CATACATACAC----ACAAACACAC----------ACACAC----ACACACACATACACAT--------TAGG--------T--------TACGCCAACCACAC------------------------------------------------TC------------------------------------TCATAC---TAATA------------CT--------------------------------------ATATA-------------------------------------------------------------------------------------------------------TGGGACCGTAAGGCCCGATTTTTGTAATTGTGACT-------------CTCACCAC------------------CATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCTA-----------------------------------T
droSim2 x:8384411-8384579 + ACT-------------------------------------------------------CA-----------CA--CGTTC----------------------------------ACATCAG--------------CA----C----A--CACACACATAGACAC--ACGC------AC------------ACTC-------------------------------------------AC------AC--AC------------------TC------AT----AC------AA----ACACATACGCACACT--------------T-------------GA---------CC----------------------------------------------------------------------T-TTGCTTCTTTG---CTTAGATGGCATGAATAATTGAAGTAGAAGTGTACAGTGGAGTTTAATCAGGAAATGTGCCCTAAAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTA-----------------------------------A
droSec2 scaffold_27:534974-535136 + CAAGTTCC---------------------------------CTGGGAACCACTCGACTGCACT-----CCACA--CACCC----------------------------------ACATCCA--------------CA----T----A--CACACGCACACACAC--ACAC------AC--------ATCTAC--------TAAA--------A-------------------------C------------------------------AC------AC----AC------AAACACAC----GCGGGC----------GTAC--TCGAACAACA------------AAGA---------------------------------------------------------------------------------------------------------------GTAAGGTCAATCATTGGAATTTTGC---------------------------------------C---------AGTTAA--------------------------------TTCA-C------------------------------------------AT--------------------------------------------------------A-----------------------------------C
droYak3 X:12787627-12787765 + CAA-----------------------------------------------------------------TCACA----------------------------------CTCA----------------------CACACACAC----ACACACTC------AC----ACATAACGACAA--------AACAAC---------------------------------------------AT------AC--------------------ACAC------AC----ACACACACAGAC----AC------AC----------ACTC--ATAAA-----------------GGAC--------------------------------------------------------------------------------------AA--------------GCAT-----GTAAGGAAAATCGAAGAATATTTAG---------------------------------------C---------ATTTAA--------------------------------TTCA-C------------------------------------------CT---------------------------------------------------------------------------------------AATCTA
droEre2 scaffold_4690:2716868-2717046 - CAC-----------------------------------------------------------------CCACA----------------------------------CACA----------------------CCCACGCAC--------ACCCACAC--ACACCCACGC------AC------------ACCC-------------------------------------------AC------AC--AC----------AC------CC------AC----AC------------ACAC------------------ACTC---------AAAGGGTCGAC----GGAC---------GAAGCGGCC--------------------------------------------------------------------------------------------------------------TGAAG-T----GAAGTGAATAT---------CGCGTTTGGTAATCGTGACAAATTCC-----------GTCG------------------AATGATGCG-C------------------------------------------ACAC--TT----C--AT--------------------T----GAA-----GCGTCGCCATCGATGCC---------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GAATAGCCAATTTTTGGTTTATTTGTTGGCACGCGGATTATCGGGG----ATTTATTCCA---C----TCACA--CAC--------------------------ACAC--A----------------------CACACAC------ACACACAC------ACAC--ACAC------AC------------ACAC-------------------------------------------AC------ACAC--------------------AC------AC----AC------AC----ACACACACGCAC------------AC--AC-------------GATTGACTGACAGG-------------CCTTGAGGGTATTGGTAATTGAATAT--------TT------------------TGG--------T---TGAATT-------------CTCTTCC-----C----T------AATTTA-------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------C----AGATACT-GTGGCGTCATCGATGCCAAGAATATTGGCCTGGTCACATCCATAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................AC--------------------AC------AC----AC------AC----ACACACACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000001000000000000000000000000000000000000000000000000
droMoj3
GAATAGCCAATTTAAGGTTTATTTGTTGGCACATGGATTATCGGGG----ATTTATGCAA-----------------------------------------------T--G--------------------CACACACTTCC----ACACCCACAC----------ATATAT----AA--------AT-------------------------------------------------TC------C--------------------------------------C------------------------ATCC------AC---------------------------C-----CTGC-----------TGGAGGGTATTGGTAATTGAATAT--------TTT---------------CGC----------C---TGCCGT-------------CTCGT------------T------CATTCG-------------------------------------------------------------------------------------------------------AA---------------------------------------------------------------------T----AGATACT-GTGGCGTCATCGATGCCAAGAATATTGGCCTGGTCACCTCCATCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GAATATCCAATTTTCGGTTTATTTGTTAGCACGCGGATTATCGGGG----ATTTT---GTTCT-----TCACA--TACTC---------------TC-----------------TCTGTAT--------------C----------ACGTACACAC----------ACACAC----ACACACACAAAC--GG---------------------------------------------ACAGACATG----------------------------------CACCT-------TTG----TG----------------------------------------ACTGACTGACAGGA---ACTGC--------GAGGGTATTGGTAATTGAATAT--------TT----------------CTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC--TT----C--TT--------------------T----AGATATT-GTGGGGTCATCGATGCCAAAAATATTGGCCTGGTCACCTCCATCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CCC-------------------------------------------------------CA-----------CA----------------------------------GTCA----------------CACACACACACACAC--------ACACAC--ACAC----ACACAC----AC----AC--AC--AC---------------------------------------------ACAGAC----------------------------------------T---------------------------------------------------------------CGGGAAAA---AGTGC--------GGACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCCTTCGTCTG------------------TGTT------------TTTTTCAAGTTTGAACGTTTTCCCTCCTGAAATTTAGGA--AC------------------------------------------TTTTGGTATCGCCGGTGTCAAGTGCAAGTGTCTACTCACG------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGTTTGAACGTTTTCCCTCC.........................................................................................................25101.1011010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGTTTGAACGTTTTCCCTC..........................................................................................................24100.80808000
.................................................................................................................................................................................................................................................................................................................................................................AA---AGTGC--------GGACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCCT.............................................................................................................................................................................25120.58725000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGTTTGAACGTTTTCCCT...........................................................................................................23100.40404000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAACGTTTTCCCTCCTGAAATT..................................................................................................2590.33312000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTGCAAGTGTCTACTCACG------.24130.31403010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGTTTGAACGTTTTCCC............................................................................................................22100.20202000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGCCTTCGTCTG------------------TGTT------------T...................................................................................................................................21100.20201010
....................................................................................................................................................................................................................................................................................................................................................................................GACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCCTTCGTCTG------------------....................................................................................................................................................24110.18202000
........................................................................................................................................................................ACAC----AC----AC--AC--AC---------------------------------------------ACAGAC----------------------------------------T---------------------------------------------------------------CG................................................................................................................................................................................................................................................................................................................................................................................2180.13100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATCGCCGGTGTCAAGTGCAAGTG.................2780.13100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAACGTTTTCCCTCCTGAAAT...................................................................................................2490.11101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAACGTTTTCCCTCCTGAAATTTAG...............................................................................................2790.11101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------------------TTTTGGTATCGCCGGTGTCAAGTG.......................2690.11101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------TACTTGCCTTCGTCTG------------------TGTT------------TTT.................................................................................................................................24100.10101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTTTGAACGTTTTCCCTCC.........................................................................................................23100.10101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------TTTTGGTATCGCCGGTGTCAA..........................22100.10101000
....................................................................................................................................................................................................................................................................................................................................................................................GACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCCTTCGTCTG------------------TGT.................................................................................................................................................27100.10101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAAGTTTGAACGTTTTCCCTCC.........................................................................................................26100.10100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAGGA--AC------------------------------------------TTTTGGTATCGCCGG................................26100.10101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGTTTGAACGTTTTCCCTCCTG.......................................................................................................27100.10101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGTTTGAACGTTTTCCCTCC.........................................................................................................24100.10101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGA--AC------------------------------------------TTTTGGTATCGCCGGTGTCAAG.........................27100.10101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGTTTGAACGTTTTCCCT...........................................................................................................22100.10101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGA--AC------------------------------------------TTTTGGTATCGCCGGTG..............................25100.10100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------------------TTTTGGTATCGCCGGTGTCAA..........................23100.10101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAAGTTTGAACGTTTTCCCTCCT........................................................................................................27100.10101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAAGTTTGAACGTTTT...............................................................................................................20110.09101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGTGTCAAGTGCAAGTGTCT..............23110.09100010
.................................................................................................................................................................................................................................................................................................................................................................AA---AGTGC--------GGACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCCTT............................................................................................................................................................................26110.09101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGCCGGTGTCAAGTGCAAGTGTC...............26110.09101000
....................................................................................................................................................................................................................................................................................................................................................................................GACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCCTTCGTCA.......................................................................................................................................................................23110.09101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTAGGA--AC------------------------------------------TTTTGGTATCGC...................................25120.08100010
.................................................................................................................................................................................................................................................................................................................................................................AA---AGTGC--------GGACGCG--------------------------------------------------------------------------------------------------------------------------------------------------TT---------TACTTGCC..............................................................................................................................................................................24130.08101000
dp5
GCC-------------------------------------------------------CA-----------CA--GGTAAACGGTGAATGAAC-----------ACAC--G--------------------CACGCACACAC----ACATACACAC----------ACACAC----ACACACTAAAACGCAT----------------GAGTAAGCTAAGGAAAC--------ACACACACACAAA----------------------------------TAA-C------ACTC----AC--ACG------------------------------------------------C---ACAGG--------GAGGG-------------------------------------------------------GGGGC---CTT---------------------------------------------------------------------------------------------------------GGGCAATTTCATTTTCCGCTTAG----CTCT-T------------------------------------------AC---------------------------------------------------------------------------------------ACAATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTC-------------------------------------------------------CC---CACACACAC--------------------------------ACAC--A----------------------CACACAC----------ACACAC----------ACACAC----AG--------AT--ACACAGACCACAAACCACAAATAAACGAGAAAAAGTTAGATACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT-----------A----------------------A-----G----C------CATAA-C----GAAGTTGAGAGCAGAAAACACAAATA-----ATTTT---------TATTAAATTTCGTTTC------------------AGTT------------TTATC---------------------------------------------------------------------C----AAGCGAT-GCGGCATCGTC----------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GGA-------------------------------------------------------CC-----------CA-----------------------TTCATGTCACAC--A--------------------CACACACACACAAATACCAACACAA----------ACACAC----ACACAAACACTC-------------------------------------------------ACAC------------------------------------------------------------------------------AC---------------------------C-----AATT---TC--------GTAATCACTCAAAAT-----------------T---------------GTTTG--------G---CAA--------------ACATTTCAA-----G----C------TATTT-T----GAAGC--------------------A-----ATTTT---------TAGCCAATTTTTGGGCAATTTTTATTCCCAAAAAA----CTCA-C------------------------------------------AA--AC------------------------------------------TT-TTACTTCA-----------------------------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTG----------TTGTTTTTTTTTGTGGCATGTTGTTGTTTGA---------------------------TA--TGTCAAGGTTA----AGCA-----------CAC--G--------------------CACACCTACAC----CT--ACACAC----------ACACAC----AC-----------------------------------------------------------------------ACTCGTACAAAAATATACACAC------GC----AT------------------------------------ACACAC---TAATA------------CA-----GGTT---T-------------------------ATGTATCTTTATAATTT---------------CTTGT--------T---TTAATT-------------TTTTTAT-----T----T------TATTT-T------TCC--------------------G-----ATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCGSizeHit CountTotal NormTotal
No Reads
droKik1
ACA-------------------------------------------------------AA-----------TA--------------------------------CAC--A--------------------CACACACACAC----ACACACACAC----------ACACAC----ACACACAC--AC--AC---------------------------------------------ACAGACAAT----------------------------------CCA-C------AATC----AC----------------------------------------AC----TGGC---------AAACACTCA--------------------------------------------------------------------------------------------------------------TTCTG-T----GAGTGTAATTG---------TGTCTTTGTTATGT---ATT-------------CTTATTTT------------------TATTTTG------------CT-----------------------TACAT----------TTGCAACATTTTTGACTGCCGCCTTTGTTG-----------------GCCCCG-----------------------------------TSizeHit CountTotal NormTotal
No Reads
droFic1
TTT-------------------------------------------------------CA---C----TCACA---------------------------AGC-AAAC--G----------------------CACTCTT----------ACACAC--ACACAC--AAGT--------------------ACAA--------AC---------------------------------AC------ACAC--------------------TC------AC----AC------AC----ACAA-----------------------------TAACG------------AAGAAA----------------------------------------------------------------------A-TTGTGTCGTGG---CCTTGCTGAGGCTAACAATTGTTGT---------------T-----------------------------------------ATTGTT---------GTTAAGTTTC-------------------------------------------------------------CCCCCTTGTATT----------------------------------------TAGTT---------CGCCACTA-----------------------------------TSizeHit CountTotal NormTotal
No Reads
droEle1
TTT-----------CTG-----------ACA---------------------------C---------ACACA----------------------------------CACA----------------------CACACACAC----AC--ACACAC----AC----ACACAC----ACACACAC--AC--AC---------------------------------------------ACACAC------------------------ACACACACACA------C------AC----ACAC------AC--ACACACACA---------------------------CA-----C--------------------------------------C---ACGGAT-CCAGAGTGTACAAAAGCAAA-TTTTCTGGTTT---CATTG-------------CAA------------C------CATTCA------------------------------------------------------------------------------------------A------------AC-----------------------TGTAA----------T------------------------------C----AG---------ATACTA-----------------------------------TSizeHit CountTotal NormTotal
No Reads
droRho1
TTT-----------CGGTTCATTT-TTGGCAAAGGGCAACTTAAAA---AGTTTGCCCCA---G----CTAAACAAGTTG----------------------------------ATGCCAACAAACATACGCACACACGTAC----ACTAACTCAC----------ACACAC----ACACACAC--AC--ACACATGCTTAAAAGTAAGGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAGAGGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------C------------------------------------------TT-TTGGTTGA-----------------------------------ASizeHit CountTotal NormTotal
No Reads
droBia1
CAC-----------------------------------------------------------------GCATA----------------------------------CACACCCACACCAA--------------C----------ACCAACACCA----------ACACAC----ACATGAACACAC-------------------------------------------------ACAC--------AG--------AAAC------A--------------C------AA----ACACAC----AC------------AC--AC---GAG--------------CG------------------------------------------------------------------------------GTGTTGGGC---CCTGGTTGACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACTCTTTTTGATTGACCTCTCTGGTTGCAGTT---------------CC-----------------------------------TSizeHit CountTotal NormTotal
No Reads
droTak1
CAC-----------------------------------------------------------------TCACA--CAGCCACATAG----AACCCACACAAG---------------------------------------------------CAC----AC----GCACAC----ACACACACCCAGACAC--------CGAG--------A-------------------------C------AC--------------------ACAC------ACACACCC------------------------ACACACCCACA---------------------------CC-----C--------------------------------------C---ACGAACACCACAA---GGACAAGCAAATTT-----------AA-----------------------------------------C---------------------------------------GTTATC---------ATTTAATTTC---------------------------------CCATTTT--------------------------------------------------------------------------GATA---------------CA-----------------------------------TSizeHit CountTotal NormTotal
No Reads
droEug1
CAC-----------------------------------------------------------------ACACA----------------------------------CACA----------------------CACACACAC--------ACACAC--ACAC----ACATAC----AC-----------------------------------------------------------AT------GCAC------ACAAACAC------AC------------AA------AAAC----GC------AC------------ACATAT---TA-------------------------------------------------ATAGCTAAATATCTGGATAAATACTCTCG---GAACTTTTGGATTT-----------AA-----------------------------------------T--------------------------------------ATTCGATACGAATTCG-----------GT-------------------------TGCTCCAATTTG--AT---------------------------------------------------------------------T----ATAT------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
dm3
TTT-------------------------------------------------------AA-----------TA--------------------------------CAC--A--------------------CATACATACAC----ACAAACACAC----------ACACAC----ACACACACATACACAT--------TAGG--------T--------TACGCCAACCACAC------------------------------------------------TC------------------------------------TCATAC---TAATA------------CT--------------------------------------ATATA-------------------------------------------------------------------------------------------------------TGGGACCGTAAGGCCCGATTTTTGTAATTGTGACT-------------CTCACCAC------------------CATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCTA-----------------------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCAC------------------CATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTA..........................................26125.002500000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000700000100010000000000000001200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCT.....................................23116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000003010001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCTA-----------------------------------T25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010403000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTAAGGCCCGATTTTTGTAA...................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGC......................................2118.0080000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000200000000001000000010000
.........................................................................................................................................................................................TACACAT--------TAGG--------T--------TACGCCAACCACAC------------------------------------------------TC------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------CTCACCAC------------------CATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------G............................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000100110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------------------TGGGACCGTAAGGCCCGATTTTTGTAA...................................................................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCAC------------------CATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------G............................................2416.0060000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000
...................................................................................................................................................................................CACACATACACAT--------TAGG--------T--------TACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAATTGTGACT-------------CTCACCAC------------------CATTT...............................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000100000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTAATTGTGACT-------------CTCACCAC------------------C...................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTAATTGTGACT-------------CTCACCAC------------------CA..................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCT.....................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCT.....................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000001000000000000000
.......................................................................................................................................................................................CATACACAT--------TAGG--------T--------TACGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTAATTGTGACT-------------CTCACCAC------------------CA..................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC------------------CATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGC......................................2614.0040000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCT.....................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000
............................................................................................................................................................................................ACAT--------TAGG--------T--------TACGCCAACCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCT.....................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCTA-----------------------------------T2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................T--------TAGG--------T--------TACGCCAACCACAC------------------------------------------------TC------------------------------------TCA.........................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCTA-----------------------------------T2414.0040000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTAATTGTGACT-------------CTCACCAC------------------CATT................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CACATACACAT--------TAGG--------T--------TACGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TAC---TAATA------------CT--------------------------------------ATATA-------------------------------------------------------------------------------------------------------TGGGACCGTA....................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................CACACACATACACAT--------TAGG--------T--------TACGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTA..........................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTAATTGTGACT-------------CTCACCAC------------------CAT.................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTAATTGTGACT-------------CTCACCAC------------------CAT.................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TACGCCAACCACAC------------------------------------------------TC------------------------------------TCATAC---TAATA------------C.................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGCTA-----------------------------------T2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGACT-------------CTCACCAC------------------CATTTTA------------CT-----------------------........................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CATACACAT--------TAGG--------T--------TACGCCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTAATTGTGACT-------------CTCACCAC------------------C...................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................T--------TAGG--------T--------TACGCCAACCACAC------------------------------------------------TC------------------------------------TCATA.......................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CACAC------------------------------------------------TC------------------------------------TCATAC---TAATA------------CT--------------------------------------ATATA-------------------------------------------------------------------------------------------------------TGG...........................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAC------------------CATTTTA------------CT-----------------------TAGAT----------GC------------------------------------------GTAGTGC......................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
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...........................................................................................................................................................................C----ACACACACATACACAT--------TAGG--------T--------TACGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTGACT-------------CTCACCAC------------------C...................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGACT-------------CTCACCAC------------------CAT.................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
ACT-------------------------------------------------------CA-----------CA--CGTTC----------------------------------ACATCAG--------------CA----C----A--CACACACATAGACAC--ACGC------AC------------ACTC-------------------------------------------AC------AC--AC------------------TC------AT----AC------AA----ACACATACGCACACT--------------T-------------GA---------CC----------------------------------------------------------------------T-TTGCTTCTTTG---CTTAGATGGCATGAATAATTGAAGTAGAAGTGTACAGTGGAGTTTAATCAGGAAATGTGCCCTAAAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTA-----------------------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................CACACATAGACAC--ACGC------AC------------AC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200002000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTAGAAGTGTACAGTGGAGTTTA........................................................................................................................................................................................................................................2711.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTAGAAGTGTACAGTGGAGTT..........................................................................................................................................................................................................................................2511.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAAGTAGAAGTGTACAG.................................................................................................................................................................................................................................................2111.00100000100000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCATGAATAATTGAAGTA............................................................................................................................................................................................................................................................2211.00100000000000010000
droSec2
CAAGTTCC---------------------------------CTGGGAACCACTCGACTGCACT-----CCACA--CACCC----------------------------------ACATCCA--------------CA----T----A--CACACGCACACACAC--ACAC------AC--------ATCTAC--------TAAA--------A-------------------------C------------------------------AC------AC----AC------AAACACAC----GCGGGC----------GTAC--TCGAACAACA------------AAGA---------------------------------------------------------------------------------------------------------------GTAAGGTCAATCATTGGAATTTTGC---------------------------------------C---------AGTTAA--------------------------------TTCA-C------------------------------------------AT--------------------------------------------------------A-----------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CAA-----------------------------------------------------------------TCACA----------------------------------CTCA----------------------CACACACAC----ACACACTC------AC----ACATAACGACAA--------AACAAC---------------------------------------------AT------AC--------------------ACAC------AC----ACACACACAGAC----AC------AC----------ACTC--ATAAA-----------------GGAC--------------------------------------------------------------------------------------AA--------------GCAT-----GTAAGGAAAATCGAAGAATATTTAG---------------------------------------C---------ATTTAA--------------------------------TTCA-C------------------------------------------CT---------------------------------------------------------------------------------------AATCTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................C----ACACACACAGAC----AC------AC----------ACTC--........................................................................................................................................................................................................................................................................................................................................................................................................2160.17100100000000
droEre2
CAC-----------------------------------------------------------------CCACA----------------------------------CACA----------------------CCCACGCAC--------ACCCACAC--ACACCCACGC------AC------------ACCC-------------------------------------------AC------AC--AC----------AC------CC------AC----AC------------ACAC------------------ACTC---------AAAGGGTCGAC----GGAC---------GAAGCGGCC--------------------------------------------------------------------------------------------------------------TGAAG-T----GAAGTGAATAT---------CGCGTTTGGTAATCGTGACAAATTCC-----------GTCG------------------AATGATGCG-C------------------------------------------ACAC--TT----C--AT--------------------T----GAA-----GCGTCGCCATCGATGCC---------------------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 05:16 AM