ID:

dvi_3946

 Coordinate:

scaffold_12855:4958394-4958544 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_10245:1]; CDS [Dvir\GJ10314-cds]; intron [Dvir\GJ10314-in]

Repeatable elements

NameClassFamilyStrand
(CATATA)nSimple_repeatSimple_repeat+

Sense Strand Reads

----------########################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AACACAGATAATGTCGGAAAGTATAACTATCAACGGCGATTGCTATGAAGGTATGCATACATATATGTATGTCTATATACATATGTATGACGACGTATTTTAAGTGTACTTAAATTGTTTAAAGTGGCAAATAGAGTTTTTACACATGCACACATATATACAAATATTATAGATATATATGTAATCATTAATAACATGTATGTACATTGTTAACGCATTTTATATAACTTAGAAGATAACAATCTATAGAA
**************************************************...........((((((((((((((((....((((((((.....((((.....((((((((...(((((......)))))...))))....))))))))...)))))))).......))))))))))))))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060664
9_males_carcasses_total
 V116
male body		 SRR060665
9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 M061
embryo
 SRR060671
9x160_males_carcasses_total
 M027
male body		 M028
head
 SRR060663
160_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 SRR060681
Argx9_testes_total
 SRR060684
140x9_0-2h_embryos_total
..CACAGATAATGTCGGAAAGT..................................................................................................................................................................................................................................... 20 0 1 5.00 5 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0
...ACAGATAATGTCGGAAAGT..................................................................................................................................................................................................................................... 19 0 1 5.00 5 2 2 0 0 0 0 0 0 0 0 1 0 0 0 0
..................AAGTATAACTATCAACGGC...................................................................................................................................................................................................................... 19 0 1 4.00 4 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....CAGATAATGTCGGAAAGT..................................................................................................................................................................................................................................... 18 0 1 3.00 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0
.................AAAGTATAACTATCAACGGC...................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...ACAGATAATGTCGGAAAGTATAACT............................................................................................................................................................................................................................... 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
AACACAGATAATGTCGGAAAGT..................................................................................................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0
.ACACAGATAATGTCGGAAAGT..................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1
.ACACAGATAATGTCGGAAAGTATAACT............................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATAACTATCAACGGCGATTGC................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AATGTCGGAAAGTATAACTAT............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................AACTATCAACGGCGATTGCT............................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................AGTATAACTATCAACGGCG..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................TCAACGGCGATTGCTATGAAGT........................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............GTAGGAAAGTATAACTATCAAC......................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........AATGTCGGAAAGTATAAC................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............GTCGGAAAGTATAACTATCAACGGC...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GTATAACTATCAACGGCGATT.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATAACTATCAACGGCGATT.................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGTATAACTATCAACGGC...................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GAAAGTATAACTATCAACGGC...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......ATAATGTCGGAAAGTATAAC................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................AACTATCAACGGCGATTGCTATGAA.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GATAATGTCGGAAAGTATAACT............................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................GCTATGAAGGTATGCATACATA............................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......GATAATGTCGGAAAGTATAACTATCAAC......................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........AATGTCGGAAAGTATAACTATCAAC......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..CACAGATAATGTCGGAAAGTAT................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................AACTATCAACGGCGATTGCTAT............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................ACTATCAACGGCGATTGCTATGAA.......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGTATAACTATCAACGGCGA.................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATAACTATCAACGGCGATTGCT............................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AGATAATGTCGGAAAGTAT................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATAACTATCAACGGCGAT................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TATCAACGGCGATTGCTAT............................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GTATAACTATCAACGGCGAT................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TATAACTATCAACGGCGATTGC................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................GTATAACTATCAACGGCGATTGCTATG............................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTGTGTCTATTACAGCCTTTCATATTGATAGTTGCCGCTAACGATACTTCCATACGTATGTATATACATACAGATATATGTATACATACTGCTGCATAAAATTCACATGAATTTAACAAATTTCACCGTTTATCTCAAAAATGTGTACGTGTGTATATATGTTTATAATATCTATATATACATTAGTAATTATTGTACATACATGTAACAATTGCGTAAAATATATTGAATCTTCTATTGTTAGATATCTT
**************************************************...........((((((((((((((((....((((((((.....((((.....((((((((...(((((......)))))...))))....))))))))...)))))))).......))))))))))))))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 V047
embryo
.............................AGTTGCCGCTAACGATACTTCT........................................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0
........ATTACAGCCTTTCATATTGAT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0
..................................................................................................................................TATCTGAAAAATTTGTCCG...................................................................................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:4958344-4958594 - dvi_3946 AACACAGATAATGTCGGAAAGTATAACTATCAACGGCGATTGCTATGAAGGTATGCATACA-----------------------TATATGTATGTCTATATACATATGTATG------------------------------------ACGA--CGTAT-----------TTTAAGTGTACTTAAATTG---TTTAAAGTGGCAAATA----GAG------TTTTTACACATGCACACATATAT----------------ACAAATATTATAGAT----------------------ATATATGTAATCATTAATAACATGTATGTACATTGTTAACGCA----------------TTTTATATA--A-CTTAGAAGATAACAATCTATAGAA
droMoj3 scaffold_6540:22257547-22257817 - AG---AGATAATGGTGGAAAGTATAACTATCAACGGTGTTAGCTATGAAGGTACGTTTACAGA-TAATTACATATGTATGTACT------TT--CAGACATTCATATGTACA------------------------------------TCGATACGTACATGTGAATATGTAGAAGTCTATTAAAATTA---TTTGTAGTGGACTGCCAAAGAAGGTAAAGA----------TTATA---------------------------------TGTACAAATACACTAACATGTTTACTTATATATGT-------------------------CGCCGTATCTAAGTAGTTTTAATAACTTTTATATA--A-CATCAAAGATAACAGTCTACAAAA
droGri2 scaffold_14906:9540836-9541073 + AACACTGATAATGTCTAGAAGTATAACTATCAACGGTGATTGCCATGCAGGTATGTATGCTTACCAATTACATAAATACATACT------------------------TAGGCACAAACAAATT-------------------------------ATAC-----------GTTAAG------AACACTA---TTTCAAGTGGCTAATT----GAGG----------ACAGACTTATATACATACATTTGTACATATGTACATACATACTATCGAT----------------------G-------------------------------------G----AAAAAGCCAACTATACTATAATATACTACTTCTGAATATAATAATCTATA---
droWil2 scf2_1100000004909:2119074-2119298 + AACCAAAATAATAAATAAATATATATAAATACATACATACATATATGTATGT-------------------------------------------ATGTGTGTATATGTATGCACATATAACCAAAACGGAAAACCGAGTGGCTACCAAAAA--TGCAT-----------TGTGAAATTAATTAAATTTTCATTTAAAACCA--------------------TTTTACAAATTTATATATATGTATG-----------------------TGTGTATGTATGTGGGCATATATGTATGC-------------------------ATATATTGCTATAGCT----------------ACTTATATA----------------------------
droAna3 scaffold_13340:15976602-15976653 - GATATAGATAATGACTGGAAGCATTACAATCAACGGCACTAGGCATGAAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000298858:2342-2413 - ATTGA---------TTGAAAT-------------ATGTATAT----------------ATA-----------------------TATATATATATATTTATACAT------------------------------------------------------------------ATAAATAAATTATAAATA---TTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAT
droEug1 scf7180000409802:1177179-1177210 - AT--------------------------------------------------------ATA-----------------------TATATATATATACATATACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAT
dm3 chr3R:11362720-11362805 - C--ACAGATAATGGCTGGAAGAATTACAATCAACGGCACCAGCCACGAAGGTGTGTATGCA-----------------------TGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTTAATTGCCTATGGAT
droEre2 scaffold_4770:10890669-10890735 - GGAACAGATAATGGCTGGAAGCATTACAATCAACGGCACCAGCCACGCAGGTGTGTATCCG-----------------------TGTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AACACAGATAATGTCGGAAAGTATAACTATCAACGGCGATTGCTATGAAGGTATGCATACA-----------------------TATATGTATGTCTATATACATATGTATG------------------------------------ACGA--CGTAT-----------TTTAAGTGTACTTAAATTG---TTTAAAGTGGCAAATA----GAG------TTTTTACACATGCACACATATAT----------------ACAAATATTATAGAT----------------------ATATATGTAATCATTAATAACATGTATGTACATTGTTAACGCA----------------TTTTATATA--A-CTTAGAAGATAACAATCTATAGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..CACAGATAATGTCGGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................2015.005002000000000002000000000000000000000000000000000000000000000010
...ACAGATAATGTCGGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................1915.005002000000000012000000000000000000000000000000000000000000000000
..................AAGTATAACTATCAACGGC....................................................................................................................................................................................................................................................................................................................................................................1914.004003100000000000000000000000000000000000000000000000000000000000
....CAGATAATGTCGGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................1813.003001000000000000100000000000001000000000000000000000000000000000
.................AAAGTATAACTATCAACGGC....................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000000000000000001000000000000000000000000000000000
...ACAGATAATGTCGGAAAGTATAACT.............................................................................................................................................................................................................................................................................................................................................................................2512.002001000000000000000000000000000000000000000000000000000000000010
AACACAGATAATGTCGGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................2212.002100000000000000001000000000000000000000000000000000000000000000
.ACACAGATAATGTCGGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000010000000000000000000000000010
.ACACAGATAATGTCGGAAAGTATAACT.............................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................ATAACTATCAACGGCGATTGC..............................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........AATGTCGGAAAGTATAACTAT...........................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
........................AACTATCAACGGCGATTGCT.............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...................AGTATAACTATCAACGGCG...................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
.............................TCAACGGCGATTGCTATGAAGT......................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.........AATGTCGGAAAGTATAAC..............................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000100000000000000000000000000000000000000000
............GTCGGAAAGTATAACTATCAACGGC....................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................GTATAACTATCAACGGCGATT................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
......................ATAACTATCAACGGCGATT................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................AGTATAACTATCAACGGC....................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
................GAAAGTATAACTATCAACGGC....................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.......ATAATGTCGGAAAGTATAAC..............................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
........................AACTATCAACGGCGATTGCTATGAA........................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
......GATAATGTCGGAAAGTATAACT.............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.........................................GCTATGAAGGTATGCATACA-----------------------TA...................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000010000000000000000000000000000000
......GATAATGTCGGAAAGTATAACTATCAAC.......................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.........AATGTCGGAAAGTATAACTATCAAC.......................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
..CACAGATAATGTCGGAAAGTAT.................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
........................AACTATCAACGGCGATTGCTAT...........................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.........................ACTATCAACGGCGATTGCTATGAA........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...................AGTATAACTATCAACGGCGA..................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................ATAACTATCAACGGCGATTGCT.............................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....AGATAATGTCGGAAAGTAT.................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
......................ATAACTATCAACGGCGAT.................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................TATCAACGGCGATTGCTAT...........................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................GTATAACTATCAACGGCGAT.................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................TATAACTATCAACGGCGATTGC..............................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
....................GTATAACTATCAACGGCGATTGCTATG..........................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AG---AGATAATGGTGGAAAGTATAACTATCAACGGTGTTAGCTATGAAGGTACGTTTACAGA-TAATTACATATGTATGTACT------TT--CAGACATTCATATGTACA------------------------------------TCGATACGTACATGTGAATATGTAGAAGTCTATTAAAATTA---TTTGTAGTGGACTGCCAAAGAAGGTAAAGA----------TTATA---------------------------------TGTACAAATACACTAACATGTTTACTTATATATGT-------------------------CGCCGTATCTAAGTAGTTTTAATAACTTTTATATA--A-CATCAAAGATAACAGTCTACAAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................ATAACTATCAACGGTGTTAGCT.............................................................................................................................................................................................................................................................................................................................................................2214.004300001
......................ATAACTATCAACGGTGTTAGCTAT...........................................................................................................................................................................................................................................................................................................................................................2413.003300000
....................GTATAACTATCAACGGTGTTAGCT.............................................................................................................................................................................................................................................................................................................................................................2412.002200000
......GATAATGGTGGAAAGTATAACTATC..........................................................................................................................................................................................................................................................................................................................................................................2512.002000002
.................AAAGTATAACTATCAACGGTGTTAGCT.............................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......ATAATGGTGGAAAGTATAACT.............................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...........................................................................................................................................................................................................CTGCCAAAGAAGGTAAAGA----------TTATA---------------------------------TGTA.......................................................................................................................2811.001100000
......GATAATGGTGGAAAGTAT.................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..............................CAACGGTGTTAGCTATGAA........................................................................................................................................................................................................................................................................................................................................................1911.001000100
.......ATAATGGTGGAAAGTATAACTATC..........................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................ACTATCAACGGTGTTAGCT.............................................................................................................................................................................................................................................................................................................................................................1911.001100000
............GGTGGAAAGTATAACTATCAACGGT....................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......GATAATGGTGGAAAGTATAACTATCAAC.......................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droGri2
AACACTGATAATGTCTAGAAGTATAACTATCAACGGTGATTGCCATGCAGGTATGTATGCTTACCAATTACATAAATACATACT------------------------TAGGCACAAACAAATT-------------------------------ATAC-----------GTTAAG------AACACTA---TTTCAAGTGGCTAATT----GAGG----------ACAGACTTATATACATACATTTGTACATATGTACATACATACTATCGAT----------------------G-------------------------------------G----AAAAAGCCAACTATACTATAATATACTACTTCTGAATATAATAATCTATA---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............GTCTAGAAGTATAACTATCAAC.......................................................................................................................................................................................................................................................................................................................................................................2211.00110
............GTCTAGAAGTATAACTATCAACGGTG...................................................................................................................................................................................................................................................................................................................................................................2611.00110
....................GTATAACTATCAACGGTGATTGCCA............................................................................................................................................................................................................................................................................................................................................................2511.00110
droWil2
AACCAAAATAATAAATAAATATATATAAATACATACATACATATATGTATGT-------------------------------------------ATGTGTGTATATGTATGCACATATAACCAAAACGGAAAACCGAGTGGCTACCAAAAA--TGCAT-----------TGTGAAATTAATTAAATTTTCATTTAAAACCA--------------------TTTTACAAATTTATATATATGTATG-----------------------TGTGTATGTATGTGGGCATATATGTATGC-------------------------ATATATTGCTATAGCT----------------ACTTATATA----------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................ATATATGTATGT-------------------------------------------ATGTGTGTA.................................................................................................................................................................................................................................................................................................21200.05100010
droAna3
GATATAGATAATGACTGGAAGCATTACAATCAACGGCACTAGGCATGAAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................ATTACAATCAACGGCACTAGGCAT...........................................................................................................................................................................................................................................................................................................................................................2415.005210020
.ATATAGATAATGACTGGAAGC...................................................................................................................................................................................................................................................................................................................................................................................2114.004010030
.ATATAGATAATGACTGGAAGCATT................................................................................................................................................................................................................................................................................................................................................................................2413.003010011
......................ATTACAATCAACGGCACTAGGC.............................................................................................................................................................................................................................................................................................................................................................2213.003200010
......................ATTACAATCAACGGCACTA................................................................................................................................................................................................................................................................................................................................................................1912.002020000
.ATATAGATAATGACTGGAAGCATTAC..............................................................................................................................................................................................................................................................................................................................................................................2612.002000020
...ATAGATAATGACTGGAAGC...................................................................................................................................................................................................................................................................................................................................................................................1912.002000020
.ATATAGATAATGACTGGAAGCAT.................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
............GACTGGAAGCATTACAATCAACGGCAC..................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.......................TTACAATCAACGGCACTAGGC.............................................................................................................................................................................................................................................................................................................................................................2111.001001000
...................AGCATTACAATCAACGGCACTA................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............ACTGGAAGCATTACAATC..........................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.................GAAGCATTACAATCAACGG.....................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................ATTACAATCAACGGCACTAGGCATGAAGT......................................................................................................................................................................................................................................................................................................................................................2911.001000010
............GACTGGAAGCATTACAATCAACGG.....................................................................................................................................................................................................................................................................................................................................................................2411.001000010
........................TACAATCAACGGCACTAGGC.............................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................CAACGGCACTAGGCATGAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.001010000
..............................CAACGGCACTAGGCATGAA........................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................TTACAATCAACGGCACTA................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..TATAGATAATGACTGGAAGC...................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..........ATGACTGGAAGCATTACAAT...........................................................................................................................................................................................................................................................................................................................................................................2011.001010000
GATATAGATAATGACTGGAAGCATTA...............................................................................................................................................................................................................................................................................................................................................................................2611.001000010
............GACTGGAAGCATTACAATCAACGGCACTA................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.................GAAGCATTACAATCAACGGCAC..................................................................................................................................................................................................................................................................................................................................................................2211.001010000
GATATAGATAATGACTGGAAGCA..................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................AACGGCACTAGGCATGAA........................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................ACAATCAACGGCACTAGGC.............................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................CAACGGCACTAGGCATGAAGT......................................................................................................................................................................................................................................................................................................................................................2111.001000010
GATATAGATAATGACTGGAAGCAT.................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.........AATGACTGGAAGCATTACAATCAACG......................................................................................................................................................................................................................................................................................................................................................................2611.001000010
...ATAGATAATGACTGGAAGCATT................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
droBia1
ATTGA---------TTGAAAT-------------ATGTATAT----------------ATA-----------------------TATATATATATATTTATACAT------------------------------------------------------------------ATAAATAAATTATAAATA---TTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATSizeHit CountTotal NormTotal
No Reads
droEug1
AT--------------------------------------------------------ATA-----------------------TATATATATATACATATACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATSizeHit CountTotal NormTotal
No Reads
dm3
C--ACAGATAATGGCTGGAAGAATTACAATCAACGGCACCAGCCACGAAGGTGTGTATGCA-----------------------TGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTTAATTGCCTATGGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..........ATGGCTGGAAGAATT................................................................................................................................................................................................................................................................................................................................................................................1515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AATGGCTGGAAGAATTACAAT...........................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000020000000
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..........ATGGCTGGAAGAATTACAATC..........................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
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...............................AACGGCACCAGCCACGAAGTC.....................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATCAACGGCACCAGCCACGA.........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AATTACAATCAACGGCACCA................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................GTATGCA-----------------------TGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTT..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
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.......ATAATGGCTGGAAGAATTACA.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................ACCAGCCACGAAGGTGTGTA................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
C--ACAGATAATGGCTGGAAGAATTAC..............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
C--ACAGATAATGGCTGGAAGAATT................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATCAACGGCACCAGCCACGAAG.......................................................................................................................................................................................................................................................................................................................................................2211.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAGATAATGGCTGGAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........TGGCTGGAAGAATTACAAT...........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................GCACCAGCCACGAAGGTGT...................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............GCTGGAAGAATTACAATCAACGGC....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........AATGGCTGGAAGAATTAAC.............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..............................CAACGGCACCAGCCACGAAG.......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGCTGGAAGAATTACAATC..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..........................................CCACGAAGGTGTGTATGCA-----------------------.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AATGGCTGGAAGAATTACA.............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
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..............................CAACGGCACCAGCCACGAAGT......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CGAAGGTGTGTATGCA-----------------------TGTGT................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......ATAATGGCTGGAAGAATT................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
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......GATAATGGCTGGAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................ACGGCACCAGCCACGAAGGTGT...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGTGTATGCA-----------------------TGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGT...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGGCACCAGCCACGAAGGTGT...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GATAATGGCTGGAAGAAA.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................................GCCACGAAGGTGTGTATGCA-----------------------TGTG.................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AACGGCACCAGCCACGAAGT......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGCTGGAAGAATTACAAT...........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................ATCAACGGCACCAGCCACGAAGT......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AATGGCTGGAAGAATTAC..............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATCAACGGCACCAGCCACGAA........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
........................TACAATCAACGGCACCAGC..............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATGGCTGGAAGAATTACAAT...........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............GCTGGAAGAATTACAATCAAC.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................CCACGAAGGTGTGTATGCA-----------------------TGTG.................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGCTGGAAGAATTACAATCAACGGCAATC................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTACAATCAACGGCACCAGCCACGA.........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTGGAAGAATTACAATCAACGG.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................AATCAACGGCACCAGCCACGA.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGCCACGAAGGTGTGTATG..............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATAATGGCTGGAAGAATTACAATC..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....AGATAATGGCTGGAAGAATTACAATC..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGATAATGGCTGGAAGAA..................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................TCAACGGCACCAGCCACGG.........................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........AATGGCTGGAAGAATTCA..............................................................................................................................................................................................................................................................................................................................................................................18130.3140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..........ATGGCTGGAAGAATA................................................................................................................................................................................................................................................................................................................................................................................15200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGAACAGATAATGGCTGGAAGCATTACAATCAACGGCACCAGCCACGCAGGTGTGTATCCG-----------------------TGTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................ATTACAATCAACGGCACCAGC..............................................................................................................................................................................................................................................................................................................................................................2111.0011000000
GGAACAGATAATGGCTGGA......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.....................CATTACAATCAACGGCACCAGCCACGC.........................................................................................................................................................................................................................................................................................................................................................2711.0010100000
.....................................ACCAGCCACGCAGGTGTGTAT...............................................................................................................................................................................................................................................................................................................................................2111.0010000010
...ACAGATAATGGCTGGAAGCATTAC..............................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
................GGAAGCATTACAATCAACGGCACCA................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
...ACAGATAATGGCTGGAAGCA..................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 05/17/2015 at 04:27 AM