ID:

dvi_3945

 Coordinate:

scaffold_12855:4963531-4963822 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.0 -28.7 -28.5

Flybase annnotation

exon [dvir_GLEANR_10244:5]; CDS [Dvir\GJ10313-cds]; exon [dvir_GLEANR_10244:4]; CDS [Dvir\GJ10313-cds]; intron [Dvir\GJ10313-in]

No Repeatable elements found

mature
  1. dvi_3945  scaffold_12855:4963605-4963629 -
  2. dvi_3951  scaffold_12855:4973506-4973530 -
star
  1. scaffold_12723:2428119-2428133 -
  2. scaffold_12726:1703229-1703243 -
  3. dvi_3945  scaffold_12855:4963725-4963739 -
  4. dvi_3951  scaffold_12855:4973626-4973640 -
  5. scaffold_12855:8214016-8214030 -
  6. scaffold_12855:8248145-8248159 -
  7. scaffold_12855:8257189-8257203 -
  8. scaffold_12875:1733335-1733349 -
  9. scaffold_12934:9035-9049 -
  10. scaffold_12954:1918824-1918838 -
  11. scaffold_12963:4284504-4284518 -
  12. scaffold_12970:9248392-9248406 -
  13. scaffold_12970:11432802-11432816 -
  14. scaffold_13047:3694287-3694301 -
  15. scaffold_13049:8767702-8767716 -
  16. scaffold_13049:11309129-11309143 -
  17. scaffold_13052:806240-806254 -
  18. scaffold_13324:1207935-1207949 -
  19. scaffold_13324:1283350-1283364 -
  20. scaffold_13324:1920934-1920948 -

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTTGCTACCCGCTTATCCCAAGGATAAGTACATATACGAATCATATAAGGTATTTATTTGTGTGCCCAAATTGGTAATGCAAATGTTCTCAACGGGCAGACGAATGTCCCTCTGACTCATTAAAGTATATATATATATATTCTTGGTCCGTCTGTTTCTTAATGTGGGTCCTCTTAGAATCCGCGCAGCACGTTTTCGCATCCGATGATCGACAACTTGTCAGGTTCGAGTTTTTCTCCAACAGTCAAGGAGAGCAACTGCCTCCTGGTTACTTTTAAGTTATTTCTCTAACCAACCACTAGATAGATTTTTCTCTAACTTTTTTCCTCAACCCGCTGCAGATTATGCCGCGTGCCCAGAATGCGCATGCCTATGTGAACGCTGCATTTCT
*************************************************************************************************************************************..............................(((((((.((...)).)))))))..(((.(((.(((.(((....)))))).))).)))((((....((((.((((((.........)))))).))))....))))**************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060686
Argx9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 M027
male body		 SRR060672
9x160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 V047
embryo
 SRR1106728
larvae
 SRR060680
 9xArg_testes_total
 GSM1528803
follicle cells		 SRR060671
9x160_males_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR1106729
mixed whole adult body
...........................................................................................................................................................................................AGCACCGTTTCCCATCCGAT......................................................................................................................................................................................... 20 3 4 0.75 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................ATGCGCATGCCTATGTGAACGCTGCA..... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................ACGAATCATATAAGGTATT................................................................................................................................................................................................................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................AGTCAAGGAGAGCAACTGCCTCCTG............................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GCACCTTTTCCCGTCCGAT......................................................................................................................................................................................... 19 3 8 0.38 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................GCCACGTGCCCAGAATGCGC......................... 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................CCACGTGCCCAGAATGCGC......................... 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GCACCGTTTCGCGTCCGAT......................................................................................................................................................................................... 19 3 11 0.18 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CTACGATCGCCAACTTGT........................................................................................................................................................................... 18 3 20 0.10 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................TCCTGGTCAGTTTTAAGT............................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................TATTCTTGGACCGTC............................................................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................TATTTATTTGTGGGACCAAAA................................................................................................................................................................................................................................................................................................................................ 21 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................GGTAATGCAAATGAGCTGAA........................................................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................ATATATATTCTTGGT.................................................................................................................................................................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................AGAGCACCTGCCACCTGGG.......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................GCAAATGGTCTCAAC.......................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AGAACGATGGGCGAATAGGGTTCCTATTCATGTATATGCTTAGTATATTCCATAAATAAACACACGGGTTTAACCATTACGTTTACAAGAGTTGCCCGTCTGCTTACAGGGAGACTGAGTAATTTCATATATATATATATAAGAACCAGGCAGACAAAGAATTACACCCAGGAGAATCTTAGGCGCGTCGTGCAAAAGCGTAGGCTACTAGCTGTTGAACAGTCCAAGCTCAAAAAGAGGTTGTCAGTTCCTCTCGTTGACGGAGGACCAATGAAAATTCAATAAAGAGATTGGTTGGTGATCTATCTAAAAAGAGATTGAAAAAAGGAGTTGGGCGACGTCTAATACGGCGCACGGGTCTTACGCGTACGGATACACTTGCGACGTAAAGA
****************************************************************************************************************************..............................(((((((.((...)).)))))))..(((.(((.(((.(((....)))))).))).)))((((....((((.((((((.........)))))).))))....))))************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 SRR060682
9x140_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060678
9x140_testes_total
 SRR060666
160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
 SRR060660
Argentina_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 M027
male body		 SRR060659
Argentina_testes_total
 SRR060687
9_0-2h_embryos_total
 V053
head
.......................................................................AACCATTGAGTTTACAAG............................................................................................................................................................................................................................................................................................................... 18 2 15 0.80 12 0 6 1 0 0 2 2 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................TCAAGAAGAGGTTGTCAGG................................................................................................................................................ 19 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................AAAAAAGGAGGTGGTCGAC..................................................... 19 2 3 0.67 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAAGAAGAGGTTGTCAGG................................................................................................................................................ 19 3 20 0.55 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCACGCTCAAAAAGAGC........................................................................................................................................................ 17 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................TACAATTGCGAAGTAAAGA 19 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TGGTTAGTGACCTAGCTAAAA................................................................................ 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................AAAAAAGGAGGTGGTCGA...................................................... 18 2 13 0.15 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................ACGACGCGCGGGTCTTACG........................... 19 2 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................AAAAAAGGAGGTGGTCGACC.................................................... 20 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0
.................................................................................................................................................................................................................................AGGCTCTAAAAGAGGCTGT.................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................AAGCTTGGGCGCGTAGTG........................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:4963481-4963872 - dvi_3945 TC--TTGCTACCCGCTTATCCCAAGGATAAGTACATATACGAATCATATAAGGTATTTA-----TTTGTGTGCCCAAATTGGTAATGCAAAT--------------------------------------------------------------------------------GTTCTCAAC------------------GGGCAGACGAATGTCCCTCT------GACT----CATTAAAGTATATATATATA------------------------TATTCTTGGTCCGTCTGTTTCTTAATGTGGGTCCTCTTAGAATCCGCGCAGCACGTTTT---------------------------------------------CGCAT-CCGATG----------------------------------------------ATCGACAAC-------------------TTGTCAGGTTCGAGTTTTTCTCC-AACAGTCAAGGAGAGCAACTGCCTCCTGGTTACTTTTAAG-TTATTTCTCTAACCAACCACTAGATAGAT-------TTTTCTCTA-ACTTTTTTC------------------CTC---------------AACCCG---CTGCAGATTATGCCGCGTGCCCAGAATGCGCATGCCTATGTGAACGCTGCATTTCT
droMoj3 scaffold_6540:22263651-22263733 - GA--C---AT-----GTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AATAT----------------------TATT--------------TTCATT---CCGCAGATTATGCCACGTGCCCAGAATGCGCATGCGTATGTGAACGCCGCCTTTCT
droGri2 scaffold_14906:9534811-9535242 + TC--CTGTTGCCTGCCTATCCCAAGGAAAAATACATTTACGAATCGTATAAGGTATCCAGGCATTCCACGTACACATATTAAGAGAGCATT------------ATTT-A------CATTTGACT----------------------------------CAGATACGCACTCATTTCCTAAC------------------AGACA-ACTTTTGTTCCTGT------GTAT----T--------------ATAAA------------------------TATCCTTGGG---GATTTTACTTAAAATAA--CCTCCTAATATCCCATAAAAACTTTATTCCAGGATACAATTTGAAGATTACTTTTATTTGAAATATTGTGTTCCCATTCTAATTACAGGGTATTAACCAGATTTCAAAGCATAGTTAAAAATACAATCAGATAAATGATATAGTAGCGAGATAGTTTTCTGTTA------AG--T-----------------------------------------------------------------------------ATCTGAATT----T-TGAATCT----------------------TCTG--------------TTGCCT---CCACAGATCATGCCACGTGCCCAGAATGCACATGCCTATGTGAATGCCGCATTTCT
droWil2 scf2_1100000004902:2546359-2546449 + AC--TTAATGGATTTTTTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-AACTC----------------------TTC--------------TCTTTTC---TTTTAGATATTACCCCGTGCTCAAAATGTTCATGCCTATGTGAATGCTGGATTCCT
dp5 2:30356627-30356696 - AA--C---CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTAC---CCTTAGATCATGCCTCGTGCCCAGAATGCCCATGCCTATGTCAATGCCGCTTTTCT
droPer2 scaffold_6:5749267-5749336 - AA--C---CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTAC---CCTTAGATCATGCCTCGTGCCCAGAATGCCCATGCCTATGTCAACGCCGCTTTTCT
droAna3 scaffold_13340:15980753-15980903 - TA--C---TTCCTGCTTATCCCAAGGATACTTATATTTACGACTCTTACAAGGTAAGG----------------------------GCACTTTCTT-------------------------------------------------------------------------------------------------TC------------------------GACCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTCCTTGAAAGCTTCTCTTT---CTTCAGATCATGCCACGTGCCCAGAACGCACACGCTTATGTAAACGCAGCTTTCCT
droBip1 scf7180000396708:4043120-4043198 + TT--TTATT-------------------------------CATTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC--------------AATCTAT---TAACAGATCCTTGCCAGAGCCCAGAACGTGCACGCCTACGTGAATGCAGGATTCCT
droKik1 scf7180000302639:1315205-1315507 + TCTGGTGCTGCCGGCGTATCCCAAGGAGCGTTTTGCGTTTGATTCCTACAAGGTGAGT--------------------TTTGAACTCCAAAT-ACTTTCTATATGTATAAGCTGAAAT-----AGAGCTTTTATATAATGCATTCCTTATTTATTAGTGGAGTCCAC--------------------------------A-------------------GACACTGTTA-----TCTTAAGATTTTA-AGATCAGAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATAAGATAACAGAAAAATCATTTT----------------------C-AGCTTTCAATAAGACAAACTCCT-----------------------------------------A-----ATCTGCACT---------------------------------------------------TTGACTCT---TCACAGATCATGCCGCGTGCCCAGAATGCCCATGCCTATGTCAACGCCGCCTTTCT
droFic1 scf7180000452523:734012-734118 - TG--TTA---C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACAAACTTCCAAG----A------------------------------AAATTCTTTTATATTAAA--------------CTTTTTGTAATGTAGATCATGCCTCGTGCCCAGAATGCCCACGCTTATGTAAACGCCGCATTTCT
droEle1 scf7180000491080:1132171-1132496 - TG--ATGCTGTCCGCGTACCCCAAGGAGCGCTTTGCATTCGACTCTTACAAGGTGAGT----------------------------TTTATTGACAGTCAACATGGAGTGAT----------------------------------------------GCAAGTGAATAGAGTGTCTTATCAATAAAAGTGCTAACAAGA---------------------GTTTAT--ATTGCTATTTAATATTCCTAAATGCAAAAAGAGTAT----TGAATGCAATCTATTGATCCCTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACT------TGATAAGCTTAAAGCAA---------G-----GCTTTCTAGCAGCATAGTAA--------------------------------------------------------------TTATTTTTTTTTTTTTTTTTTTAATGGTCTTTTTCT---CCACAGATTATGCCCCGTGCCCAGAACGCCCATGCCTATGTAAACGCGGCGTTTCT
droRho1 scf7180000779997:101459-101527 + TA--ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------------TTTTCT---AAACAGATTATGCCCCGTGCCCAGAACGCCCATGCCTATGTAAACGCGGCCTTCCT
droBia1 scf7180000302136:959054-959362 - GG---TGCTATCTGCTTATCCCAAGGAGCGTTTTGCATTTGATTCCTATAAGGTGAGT----------------------------ATT--------------TGCTGT------AATTTGTAA----------------------------------GAGGTACGATATCATTTCTTATCAATGATAGTGCAGTCAAGAGGTATAT---TATCTGCCAGACATTCTTAAATGCTTGTAAATACTCCTTAATTCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATATAAAA-AGTAATTTAAAACTGTTACGATG-G----------------------TTAATTTTTTTATAGACAGAT-ACC-AA----A-------------------------A------TTAATTTAAT---TTA--------------TTTCGT---ATACAGATCATGCCCCGTGCCCAGAATGCCCATGCCTATGTAAATGCTGCCTTCCT
droTak1 scf7180000415769:1787919-1787981 + CG--AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT---CTACAGATAATGCCCCGTGCCCAGAATGCCCATGCTTATGTCAATGCTGCTTTTCT
droEug1 scf7180000409797:2247966-2248050 + TA--A---AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTTTAATTTTGAT--------------TTTCTT---GAACAGATCATGCCTCGCGCCCAGAATGCCCATGCCTATGTGAACGCTGCCTTCCT
dm3 chr3R:11360735-11361053 - TG--C---TGCGCGCGTATCCCAAGGAGCGGTTTGCATTTGACTCCTACAAGGTGAGT----------------------------GCAAATTATGGAGTATTCGAAGTAGT----------------------------------------------GAAGTGCAGTACAATTTCTTATCAACGAAAGTAATGC------------------------GACTTTACAAATGTCTTGTAAGTTTTTAGAAATGCGAAAAAAACGAGCAATTACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGGG------TGATTATCTCAAAGCTGATAAGATA-G----------------------CCA-TTCTTTCATTTACAAATCATTTAA----A-------------------------ATTGAATATATTTTAAT--TTTA--------------CTCTTT---TAACAGATTATGCCCCGTGCGCAGAATGCCCATGCCTATGTGAACGCTGCTTTCCT
droSim2 3r:9867799-9868120 + dsi_7098 TG--GTGCTGCGCGCGTATCCGAAGGAGCGGTTTGCATTTGACTCCTACAAGGTGAGT----------------------------GCAAATTATTGTGTATGCGAAGTAGT----------------------------------------------GAAGTGCAGTATAATTTCTTATCAACGAAAGTAATGC------------------------GACTTTGTCAATAGCTTGTAAGTTTTTACAAATGCGAAATAAGCGAGTAAGTACGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTCG------TGATTATCGCAAAGCAGATAAGATA-G----------------------TCG-TTCTTTCATTTACAAATTATTTAA----A-------------------------ATTTAAAACACTTAAAT--TGTA--------------CTCTTT---TAACAGATTATGCCCCGTGCGCAGAATGCCCATGCCTATGTGAATGCTGCTTTCCT
droSec2 scaffold_0:10575260-10575573 + TT--GTGCTGCGCGCGTATCCCAAGGAGCGGTTTGCATTTGACTCCTACAAGGTGAGT----------------------------GCAAATTATAGTGTATACGAAGT-------------------------------------------------GAAGTGCAGTATAATTTCTTATCAACGAAAGTAATGC------------------------GACTTTGACAATAGCTTGTAAGTTTTTAGATATGCGATATAGGCGAGTAAGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTCG------TGATTATCTCAAAGCAGATAAGATA-G----------------------CCG-TTCTTTCATTTACAAATTATTTAA----A-------------------------ATTTAAAACACTTAAAT--TGTA--------------CTCTTT---TAACAGATTATGCCCCGTGCGCAGAATGCCCATGCCTATGTGAATGCTGCTTTCCT
droYak3 3R:15055203-15055297 + TA--A---GT---------------------------------------------------------------------------------------------------------------------------------------------------------ACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCGTTTACA--TTTCCTAA----T-------------------------ACTT---------------------------------GAACCT---TTACAGATCATGCCTCGTGCCCAAAATGCCCATGCCTATGTCAACGCCGCTTTTCT
droEre2 scaffold_4770:10905138-10905226 - AA--ATA---TATTCATTTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----A-------------------------ACTA---------------T---------------TCACTAAC---CCTTAGATCATGCCACGGGCTCAAAATGCCCATGCCTATGTCAATGCGGGATTTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TC--TTGCTACCCGCTTATCCCAAGGATAAGTACATATACGAATCATATAAGGTATTTA-----TTTGTGTGCCCAAATTGGTAATGCAAAT--------------------------------------------------------------------------------GTTCTCAAC------------------GGGCAGACGAATGTCCCTCT------GACT----CATTAAAGTATATATATATA------------------------TATTCTTGGTCCGTCTGTTTCTTAATGTGGGTCCTCTTAGAATCCGCGCAGCACGTTTT---------------------------------------------CGCAT-CCGATG----------------------------------------------ATCGACAAC-------------------TTGTCAGGTTCGAGTTTTTCTCC-AACAGTCAAGGAGAGCAACTGCCTCCTGGTTACTTTTAAG-TTATTTCTCTAACCAACCACTAGATAGAT-------TTTTCTCTA-ACTTTTTTC------------------CTC---------------AACCCG---CTGCAGATTATGCCGCGTGCCCAGAATGCGCATGCCTATGTGAACGCTGCATTTCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCATGCCTATGTGAACGCTGCA.....2620.501000000000000001000000000000000000000000000000000000000000000000
......................................ACGAATCATATAAGGTATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAGGAGAGCAACTGCCTCCTG.........................................................................................................................................................................2520.501000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................ATATA------------------------TATTCTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................15200.051000000000000000000000000000000000000000000000000000000000000001
droMoj3
GA--C---AT-----GTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AATAT----------------------TATT--------------TTCATT---CCGCAGATTATGCCACGTGCCCAGAATGCGCATGCGTATGTGAACGCCGCCTTTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTATGCCACGTGCCCAGAATG............................2320.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGCCACGTGCCCAGA...............................1920.501100000
droGri2
TC--CTGTTGCCTGCCTATCCCAAGGAAAAATACATTTACGAATCGTATAAGGTATCCAGGCATTCCACGTACACATATTAAGAGAGCATT------------ATTT-A------CATTTGACT----------------------------------CAGATACGCACTCATTTCCTAAC------------------AGACA-ACTTTTGTTCCTGT------GTAT----T--------------ATAAA------------------------TATCCTTGGG---GATTTTACTTAAAATAA--CCTCCTAATATCCCATAAAAACTTTATTCCAGGATACAATTTGAAGATTACTTTTATTTGAAATATTGTGTTCCCATTCTAATTACAGGGTATTAACCAGATTTCAAAGCATAGTTAAAAATACAATCAGATAAATGATATAGTAGCGAGATAGTTTTCTGTTA------AG--T-----------------------------------------------------------------------------ATCTGAATT----T-TGAATCT----------------------TCTG--------------TTGCCT---CCACAGATCATGCCACGTGCCCAGAATGCACATGCCTATGTGAATGCCGCATTTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCACATGCCTATGTG..............1940.25110
droWil2
AC--TTAATGGATTTTTTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-AACTC----------------------TTC--------------TCTTTTC---TTTTAGATATTACCCCGTGCTCAAAATGTTCATGCCTATGTGAATGCTGGATTCCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
AA--C---CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTAC---CCTTAGATCATGCCTCGTGCCCAGAATGCCCATGCCTATGTCAATGCCGCTTTTCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCCTCGTGCCCAGAATGCC..........................2221.5030300000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGCCTCGTGCCCAGAATGCC..........................2420.5010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATGCCTCGTGCCCAGA...............................2020.5010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCCTCGTGCCCAGAATGCCCATGC.....................2720.5010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGAATGCCCATGCCTATGT...............2250.4020000200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTCAATGCCGCTTTT..1940.2510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTCAATGCCGCTTTTCT2140.2510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAATGCCCATGCCTATGTC..............2240.2510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAATGCCCATGCCTATGTCAAT...........2540.2510010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGCCCATGCCTATGT...............1950.2010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCCATGCCTATGT...............1850.2010100000000
droPer2
AA--C---CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTAC---CCTTAGATCATGCCTCGTGCCCAGAATGCCCATGCCTATGTCAACGCCGCTTTTCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGCCTCGTGCCCAGAATGC...........................2220.501001000
droAna3
TA--C---TTCCTGCTTATCCCAAGGATACTTATATTTACGACTCTTACAAGGTAAGG----------------------------GCACTTTCTT-------------------------------------------------------------------------------------------------TC------------------------GACCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTCCTTGAAAGCTTCTCTTT---CTTCAGATCATGCCACGTGCCCAGAACGCACACGCTTATGTAAACGCAGCTTTCCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TT--TTATT-------------------------------CATTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC--------------AATCTAT---TAACAGATCCTTGCCAGAGCCCAGAACGTGCACGCCTACGTGAATGCAGGATTCCTSizeHit CountTotal NormTotal
No Reads
droKik1
TCTGGTGCTGCCGGCGTATCCCAAGGAGCGTTTTGCGTTTGATTCCTACAAGGTGAGT--------------------TTTGAACTCCAAAT-ACTTTCTATATGTATAAGCTGAAAT-----AGAGCTTTTATATAATGCATTCCTTATTTATTAGTGGAGTCCAC--------------------------------A-------------------GACACTGTTA-----TCTTAAGATTTTA-AGATCAGAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGATAAGATAACAGAAAAATCATTTT----------------------C-AGCTTTCAATAAGACAAACTCCT-----------------------------------------A-----ATCTGCACT---------------------------------------------------TTGACTCT---TCACAGATCATGCCGCGTGCCCAGAATGCCCATGCCTATGTCAACGCCGCCTTTCTSizeHit CountTotal NormTotal
No Reads
droFic1
TG--TTA---C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACAAACTTCCAAG----A------------------------------AAATTCTTTTATATTAAA--------------CTTTTTGTAATGTAGATCATGCCTCGTGCCCAGAATGCCCACGCTTATGTAAACGCCGCATTTCTSizeHit CountTotal NormTotal
No Reads
droEle1
TG--ATGCTGTCCGCGTACCCCAAGGAGCGCTTTGCATTCGACTCTTACAAGGTGAGT----------------------------TTTATTGACAGTCAACATGGAGTGAT----------------------------------------------GCAAGTGAATAGAGTGTCTTATCAATAAAAGTGCTAACAAGA---------------------GTTTAT--ATTGCTATTTAATATTCCTAAATGCAAAAAGAGTAT----TGAATGCAATCTATTGATCCCTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACT------TGATAAGCTTAAAGCAA---------G-----GCTTTCTAGCAGCATAGTAA--------------------------------------------------------------TTATTTTTTTTTTTTTTTTTTTAATGGTCTTTTTCT---CCACAGATTATGCCCCGTGCCCAGAACGCCCATGCCTATGTAAACGCGGCGTTTCTSizeHit CountTotal NormTotal
No Reads
droRho1
TA--ACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------------TTTTCT---AAACAGATTATGCCCCGTGCCCAGAACGCCCATGCCTATGTAAACGCGGCCTTCCTSizeHit CountTotal NormTotal
No Reads
droBia1
GG---TGCTATCTGCTTATCCCAAGGAGCGTTTTGCATTTGATTCCTATAAGGTGAGT----------------------------ATT--------------TGCTGT------AATTTGTAA----------------------------------GAGGTACGATATCATTTCTTATCAATGATAGTGCAGTCAAGAGGTATAT---TATCTGCCAGACATTCTTAAATGCTTGTAAATACTCCTTAATTCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATATAAAA-AGTAATTTAAAACTGTTACGATG-G----------------------TTAATTTTTTTATAGACAGAT-ACC-AA----A-------------------------A------TTAATTTAAT---TTA--------------TTTCGT---ATACAGATCATGCCCCGTGCCCAGAATGCCCATGCCTATGTAAATGCTGCCTTCCTSizeHit CountTotal NormTotal
No Reads
droTak1
CG--AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT---CTACAGATAATGCCCCGTGCCCAGAATGCCCATGCTTATGTCAATGCTGCTTTTCTSizeHit CountTotal NormTotal
No Reads
droEug1
TA--A---AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTTTAATTTTGAT--------------TTTCTT---GAACAGATCATGCCTCGCGCCCAGAATGCCCATGCCTATGTGAACGCTGCCTTCCTSizeHit CountTotal NormTotal
No Reads
dm3
TG--C---TGCGCGCGTATCCCAAGGAGCGGTTTGCATTTGACTCCTACAAGGTGAGT----------------------------GCAAATTATGGAGTATTCGAAGTAGT----------------------------------------------GAAGTGCAGTACAATTTCTTATCAACGAAAGTAATGC------------------------GACTTTACAAATGTCTTGTAAGTTTTTAGAAATGCGAAAAAAACGAGCAATTACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGGG------TGATTATCTCAAAGCTGATAAGATA-G----------------------CCA-TTCTTTCATTTACAAATCATTTAA----A-------------------------ATTGAATATATTTTAAT--TTTA--------------CTCTTT---TAACAGATTATGCCCCGTGCGCAGAATGCCCATGCCTATGTGAACGCTGCTTTCCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................GTTTGCATTTGACTCCTACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCGTATCCCAAGGAGCGGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000
.................ATCCCAAGGAGCGGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCCATGCCTATGTGAACGCTG.......2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGCCTATGTGAACGCT........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.G--C---TGCGCGCGTATCCCAAGGAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................AACGAGCAATTACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT.............................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...............GTATCCCAAGGAGCGGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCCATGCCTATGTGAAC...........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCATGCCTATGTGAACGCT........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTGAACGCTGCTTTCCT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATGCCCATGCCTATGTGA.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCCCAAGGAGCGGTTTGCATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........GCGCGCGTATCCCAAGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................GAGCGGTTTGCATTTGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCCCATGCCTATGTGAACGCT........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAAGGAGCGGTTTGCATTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....C---TGCGCGCGTATCCCAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGGAGCGGTTTGCATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTATGTGAACGCTGCT.....2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAGAATGCCCATGCCTATGTGA.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCCCATGCCTATGTGAC............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAAGGAGCGGTTTGCATTTGACTCCTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATGTGAACGCTGCTTTC..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGCCCATGCCTATGTGAAC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAAAGCTGATAAGATA-G----------------------C...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.G--C---TGCGCGCGTATCCCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GGAGCGGTTTGCATTTGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GTATCCCAAGGAGCGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCCCCGTGCGCAGAA..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGCGTATCCCAAGGAGCGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGCGTATCCCAAGGAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................GTAATGC------------------------GACTTTACAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATGTGAACGCTGCTTT...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCCTATGTGAACGCTGCT.....2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAGCGGTTTGCATTTGACTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCCATGCCTATGTGAAT...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGCCTATGTGAACGCTGC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTGCATTTGACTCCTACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TCGAAGTAGT----------------------------------------------GAAGTGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................AGGAGCGGTTTGCATTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCATGCCTATGTGAAC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GTATCCCAAGGAGCGGTTTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........GCGCGTATCCCAAGGAGCGGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAATGCCCATGCCTATGTGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCATGCCTATGTGAACGCTGC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GTATCCCAAGGAGCGGTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................GTTTGCATTTGACTCCTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.G--C---TGCGCGCGTATCCCAAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCCATGCCTATGTGAACGCT........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTTGACTCCTACAAGGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGCGTATCCCAAGGAGCGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GGTTTGCATTTGACTCCTACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCGTATCCCAAGGAGCGGTTTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTATGCCCCGTGCGCA.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TATCCCAAGGAGCGGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.............GCGTATCCCAAGGAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TG--C---TGCGCGCGTATCCCAAGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................GGTTTGCATTTGACTCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TATCCCAAGGAGCGGTTTGCATTTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCATGCCTATGTGAA............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCGTATCCCAAGGAGCGGTTTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGCCCATGCCTATGTGA.............2111.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGCCTATGTGAACGC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCATGCCTATGTGAACGCTGCTTT...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAGCGGTTTGCATTTGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCCCAAGGAGCGGTTTGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........TGCGCGCGTATCCCAAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTGCGCAGAATGCCC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCATGCCTATGTGAACGC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCATGCCTATGTGAACGCTG.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........GCGCGTATCCCAAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGCCTATGTGAACGCT........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................GTTTGCATTTGACTCCTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................ATCCCAAGGAGCGGTTTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................CTCCTACAAGGTGAGT----------------------------GCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGCGCGTATCCCAAGGAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............GTATCCCAAGGAGCGGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................GAGCGGTTTGCATTTGACTCCTACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TG--GTGCTGCGCGCGTATCCGAAGGAGCGGTTTGCATTTGACTCCTACAAGGTGAGT----------------------------GCAAATTATTGTGTATGCGAAGTAGT----------------------------------------------GAAGTGCAGTATAATTTCTTATCAACGAAAGTAATGC------------------------GACTTTGTCAATAGCTTGTAAGTTTTTACAAATGCGAAATAAGCGAGTAAGTACGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTCG------TGATTATCGCAAAGCAGATAAGATA-G----------------------TCG-TTCTTTCATTTACAAATTATTTAA----A-------------------------ATTTAAAACACTTAAAT--TGTA--------------CTCTTT---TAACAGATTATGCCCCGTGCGCAGAATGCCCATGCCTATGTGAATGCTGCTTTCCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........GCGCGTATCCGAAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
.............................GGTTTGCATTTGACTCCTACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020000000000000
.....................GAAGGAGCGGTTTGCATTTGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTGAATGCTGCTTTCCT2111.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCCCATGCCTATGTGAATGCTGCTT....2811.00100010000000000000
.....................GAAGGAGCGGTTTGCATTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTATGTGAATGCTGCTTTCC.2411.00100010000000000000
............................CGGTTTGCATTTGACTCCTACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGTGCGCAGAATGCCCATGC.....................2311.00100000000000100000
................................................................................................................................................................................................TGC------------------------GACTTTGTCAATAGCTTGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
................TATCCGAAGGAGCGGTTTGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGCCCATGCCTATGTGAATGCT........2611.00100010000000000000
.............GCGTATCCGAAGGAGCGGTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
........................GGAGCGGTTTGCATTTGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.........................GAGCGGTTTGCATTTGACTCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..................................GCATTTGACTCCTACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
........................................................................................AAATTATTGTGTATGCGAAGTAGT----------------------------------------------GAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
droSec2
TT--GTGCTGCGCGCGTATCCCAAGGAGCGGTTTGCATTTGACTCCTACAAGGTGAGT----------------------------GCAAATTATAGTGTATACGAAGT-------------------------------------------------GAAGTGCAGTATAATTTCTTATCAACGAAAGTAATGC------------------------GACTTTGACAATAGCTTGTAAGTTTTTAGATATGCGATATAGGCGAGTAAGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTCG------TGATTATCTCAAAGCAGATAAGATA-G----------------------CCG-TTCTTTCATTTACAAATTATTTAA----A-------------------------ATTTAAAACACTTAAAT--TGTA--------------CTCTTT---TAACAGATTATGCCCCGTGCGCAGAATGCCCATGCCTATGTGAATGCTGCTTTCCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............GTATCCCAAGGAGCGGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040310
....GTGCTGCGCGCGTATCCCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021010
.................ATCCCAAGGAGCGGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.......................AGGAGCGGTTTGCATTTGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGCCCATGCCTATGTGAAT...........2311.0010100
....GTGCTGCGCGCGTATCCCAAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAATGCCCATGCCTATGT...............2011.0010010
.............GCGTATCCCAAGGAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
........TGCGCGCGTATCCCAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
............CGCGTATCCCAAGGAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTGAATGCTGCTTTCC.2011.0011000
....................................................GTGAGT----------------------------GCAAATTATAGTGTATACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.........GCGCGCGTATCCCAAGGAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGCCCCGTGCGCAGAAT.............................2111.0010100
..............................................................................................................................................................................................AATGC------------------------GACTTTGACAATAGCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
....GTGCTGCGCGCGTATCCCAAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
...............GTATCCCAAGGAGCGGTTTGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
......................AAGGAGCGGTTTGCATTTGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...............................TTTGCATTTGACTCCTACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
droYak3
TA--A---GT---------------------------------------------------------------------------------------------------------------------------------------------------------ACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCGTTTACA--TTTCCTAA----T-------------------------ACTT---------------------------------GAACCT---TTACAGATCATGCCTCGTGCCCAAAATGCCCATGCCTATGTCAACGCCGCTTTTCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCAAAATGCCCATGCCTATGT...............2511.00101000000000
droEre2
AA--ATA---TATTCATTTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----A-------------------------ACTA---------------T---------------TCACTAAC---CCTTAGATCATGCCACGGGCTCAAAATGCCCATGCCTATGTCAATGCGGGATTTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/17/2015 at 04:41 AM