ID:

dvi_3904

 Coordinate:

scaffold_12855:4676304-4676368 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.7 -9.7 -9.4

Flybase annnotation

CDS [Dvir\GJ10832-cds]; CDS [Dvir\GJ10832-cds]; exon [dvir_GLEANR_10731:3]; exon [dvir_GLEANR_10731:4]; intron [Dvir\GJ10832-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------##################################################
TGGGCAAGCCGCTGTACATCAAATTCACCCGTCGCAACACCGTTGCACATGTAAGTAGAGCGTCTTCAGGTTGAGGGAAGCGCTATTGTTGATTTTTTTTTTATTTTCTGGACAGGTCAAGCACAATGGCGAGCTGACAGGCAACATGGAACTGGCCGAGGGGGA
**************************************************...(((((.((.((((((...))))))..)).)))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 V047
embryo
 SRR060672
9x160_females_carcasses_total
 M027
male body		 V116
male body		 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060681
Argx9_testes_total
 V053
head
 SRR060687
9_0-2h_embryos_total
 M028
head
 SRR060660
Argentina_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR1106714
embryo_2-4h
 SRR060658
140_ovaries_total
 SRR060659
Argentina_testes_total
.......................................................................................................................................GACAGGCAACATGGAACTGGCCGA...... 24 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GACAGGCAACATGGAACTG........... 19 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ATCAAATTCACCCGTCGCAACACC............................................................................................................................ 24 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................CAAATTCACCCGTCGCAACACCGTT......................................................................................................................... 25 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................CACCCGTCGCAACACCGTT......................................................................................................................... 19 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATTCACCCGTCGCAACACCGTTG........................................................................................................................ 23 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................AACATGGAACTGGCCGAG..... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CAAGCACAATGGCGAGCTGACAGGCAA..................... 27 0 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CACATGTCAAGCACAATGGCGAGCT.............................. 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GACAGGCAACATGGAACTGGC......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCTGTACATCAAATTCACCC....................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GCACAATGGCGAGCTGACA.......................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...GCAAGCCGCTGTACATCAAATTCACCCGT..................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AACATGGAACTGGCCGAGG.... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATTCACCCGTCGCAACACCGTT......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AACATGGAACTGGCCGAGGGG.. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACAATGGCGAGCTGACAGGCAACA................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CAAGCACAATGGCGAGCTGACAGGCA...................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCATATGTCAAGCACAATGGCGAGCTGAC........................... 29 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................CACCCGTCGCAACACCGTTGCACATG.................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ACATCAAATTCACCCGTCGC.................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................GTCAAGCACAATGGCGAGCTGA............................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................ATCAAATTCACCCGTCGCAACACCGT.......................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TGACAGGCAACATGGAACTGGCCGAG..... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GCACAATGGCGAGCTGACAGGCAACATGGAACTGGC......... 36 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................CAACATGGAACTGGCCGAGGGG.. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CAATGGCGAGCTGACAGGC....................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGCGAGCTGACAGGCAACATGGA............... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ACATGTCAAGCACAATGGCG.................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CAAGCACAATGGCGAGCTGACAGGCAAC.................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GACAGGCAACATGGAACT............ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................GTCAAGCACAATGGCGAGCT.............................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................CAACACCGTTGCACATGTCA............................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AATTCACCCGTCGCAACACCG........................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCACATGTCAAGCACAATGGCGAGCT.............................. 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AAGCCGCTGTACATCAAATTCACC........................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................AAATTCACCCGTCACAGCACC............................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCCGCTGTACATCAAATTCACCC....................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TACATCAAATTCACCCGTCGCAACACCGT.......................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................ATCAAATTCACCCGTCGCAAC............................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ATCAAATTCACCCGTCGCAACACCGTT......................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CATGGAACTGGCCGAGGG... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGCACATGTCAAGCACAATGGCGAGCT.............................. 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCACATGTCAAGCACAATGGCGAGCTGA............................ 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CGCTGTACATCAAATTCACCC....................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GCCGCTGTACATCAAATTCACCCGT..................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................AAATTCACCCGTCGCAACACCGT.......................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CAAATTCACCCGTCGCAACACC............................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATTCACCCGTCGCAACAC............................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GCACAATGGCGAGCTGACAGGC....................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................CGTCGCAACACCGTTGCACATGT................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................ACATGTCAAGCACAATGGCGAGC............................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCCGCTGTACATCAAATTCACCCGTC.................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GACAGGCAACATGGAACTGGCCGAG..... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CAAATTCACCCGTCGCAACACCG........................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CCGTCGCAACACCGTTGCACA.................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTAGAGCGTCTTCAG................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CATGGAACTGGCCGAGGGT.. 19 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTGGCGAGCTGACAGGCAACA................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATGGAACTGGCCGAGGGTG. 19 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGATCTCGAGCTGACAGGC....................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CGTCTTGAGGTTGAGGGG....................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................ATCGTCTTCAGGTTTAGAGA....................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................CAGGTTAAGGGGAGCGCTT................................................................................ 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................AAACTCACCCGTCCCAGCA.............................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACCCGTTCGGCGACATGTAGTTTAAGTGGGCAGCGTTGTGGCAACGTGTACATTCATCTCGCAGAAGTCCAACTCCCTTCGCGATAACAACTAAAAAAAAAATAAAAGACCTGTCCAGTTCGTGTTACCGCTCGACTGTCCGTTGTACCTTGACCGGCTCCCCCT
**************************************************...(((((.((.((((((...))))))..)).)))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 M047
female body
 SRR060679
140x9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060661
160x9_0-2h_embryos_total
 M061
embryo
 SRR060686
Argx9_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 M027
male body		 V047
embryo
 SRR060671
9x160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 M028
head
 V053
head
 SRR060664
9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060689
160x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060657
140_testes_total
 GSM1528803
follicle cells		 SRR060678
9x140_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060658
140_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060673
9_ovaries_total
 SRR060674
9x140_ovaries_total
....................................TGGGGCAACATGTAGATTC.............................................................................................................. 19 3 11 140.82 1549 502 193 116 110 71 55 28 81 73 65 4 29 41 39 33 13 1 13 14 11 1 9 11 9 2 6 5 2 8 0 0 2 0 1 0 1 0
.......................................GGCAACATGTAGATTCAGC........................................................................................................... 19 3 4 91.00 364 66 6 24 40 33 32 45 23 9 3 4 11 3 2 3 9 15 2 1 0 11 3 0 2 2 4 2 2 0 3 2 1 1 0 0 0 0
....................................TGGGGCAACATGTAGATTCA............................................................................................................. 20 3 5 38.80 194 53 25 37 5 2 11 4 3 7 16 2 1 1 7 6 2 0 0 0 4 0 0 4 0 0 0 0 2 2 0 0 0 0 0 0 0 0
.......................................GGCAACATGTAGATTCAG............................................................................................................ 18 3 20 11.50 230 4 7 15 30 35 37 38 19 6 0 2 19 0 0 1 6 0 2 0 1 0 0 0 3 0 1 2 0 0 0 0 0 1 0 0 0 1
........................................GCAACATGTAGATTCAGC........................................................................................................... 18 3 20 10.70 214 2 0 2 22 48 3 30 17 25 3 0 0 7 2 7 13 1 0 11 3 5 1 3 0 1 2 2 0 0 0 1 0 0 1 2 0 0
....................................TGGGGCAACATGTAGATTCATC........................................................................................................... 22 3 1 6.00 6 0 0 0 0 0 1 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GGGGCAACATGTAGATTCA............................................................................................................. 19 3 10 5.60 56 4 4 3 5 3 4 7 6 3 0 0 2 2 2 4 1 0 0 3 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................TGGGGCAACGTGTAGATTCAGC........................................................................................................... 22 3 1 5.00 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGTGGCAACATGTAGATTCAGC........................................................................................................... 22 3 1 5.00 5 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GGCAACATGTAGATTCAG........................................................................................................................................... 18 3 20 3.00 60 0 0 0 0 35 0 0 19 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGTGGCAACATGTAGATTC.............................................................................................................. 19 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GGGGCAACATGTAGATTCATC........................................................................................................... 21 3 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................GGGCAACATGTAGATTCATC........................................................................................................... 20 3 3 1.33 4 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GGCAACGTGTAGATTCAGC........................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................TTGGGGCAACATGTACATTC.............................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGGGGCAACATGTAGATTCAT............................................................................................................ 21 3 3 1.00 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GAAGTGGTCAGCGTTGTGGC........................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TGGCAACATGTAGATTCAGC........................................................................................................... 20 3 4 0.75 3 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGGGGCAACGTGTAGATTC.............................................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................GGGCAACGTGTAGATTCAGC........................................................................................................... 20 3 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GGGGCAACGTGTAGATTCAGC........................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGCGGCAACATGTAGATTC.............................................................................................................. 19 3 4 0.50 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGAAGTGGTCAGCGTTGTGGC........................................................................................................................... 21 3 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TTGGGGCAACATGTAGATTCA............................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGTGGCAACATGTAGATT............................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TGGCAACATGTAGATTCA............................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TGTAGTTTAGGGGGGCAGCCT................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GTGGCAACATGTAGATTCAG............................................................................................................ 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGGGGCAACATGTACATT............................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GTTGTGGCTACTTGTACAATC.............................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TGGCAACATGTAGATTCAG............................................................................................................ 19 3 6 0.33 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................GGGCAACATGTACATTCAG............................................................................................................ 19 3 10 0.20 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TGGCAACATGTATATTCAGC........................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GGCAACATGTAGATTCAGT.......................................................................................................................................... 19 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CGGCAACATGTAGATTCAG........................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................ATGTGGCAACATGTAGATT............................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................GGGCAACGTGTAGATTCAG............................................................................................................ 19 3 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................GCGTTAACAACTAAAAGAA.................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:4676254-4676418 + dvi_3904 TGGGCAAGCCGCTGTACATCAAATTCACCCGTCGCAACACCGT---TGCACA---TGTAAGTAGAGCGTCTTCAGG---TT-------GAGGGAAGCG---------------------CT-ATTGTTGAT-------------TTTT-----------TTTTTATTTTC--TGGACAGGTCAAGCACAATGG----CGAGCTGACAGGCAACATGGAACTGGCCGAGGGGGA-
droMoj3 scaffold_6540:9038824-9038990 + TCGGCAAGCCGCTGTACATCAAAATGACCCG---CAGCAAACAGGTCGCACA---CGTAAGTGGACCGAAG-----------------------TGAA-CTCATTGA-GTATCATTG------GGATTATT-------GCTGAGATTT-----------GA-----TTTGGT--TTTAGGTCAAGCACAATGG----CGAGCTGACTGGCAACATGGAACTGGCCGAGGGCGA-
droGri2 scaffold_14906:7193026-7193199 + TGGGCAAGCCGCTGTATATTTTAGCCACTCGTCGCAAGACTGT---CGCACA---TGTAAGTCGTCGTCAT-----ATGTTCTTTGCTTAAAGTAGAT---------------------TT-----TTAT-TATTTTTTA----------TTGATGTTC-----AATTCT--TGGGCAGGTCAAGCACAATGG----CGAGTTGACAGGCAACATGGAACTGGCCGAGGGAGA-
droWil2 scf2_1100000004902:1059802-1059962 - TGGGCAAGCCTTTGTATATCAAATTCACCCG---GAAGAACAC---TGCTCA---TGTGAGTACAAAGAAA---TA---AT-------GAAT------A------------TCTAAGGATTTATTATAAAT-------------TGTA-----------AAC--GTATTT--TGGACAGGCCAATCACAATGG----TGAACTGACAGGCAACATAGAGCTGGCCGAAGGTGA-
dp5 2:11989143-11989306 + TGGGCAAACCGCTCTACATCAAATTCACTCG---CAAGAGCAA---TGCCCA---CGTGAGTGCACACTCA-T---ATATCTTTCACT-A---------------------------------ATGTGAT-TACTTACTG----------TTTGTTCTC-----TGCTTT--TATTTAGTCCAAACACAATGG----CCAGTTGACCGGCAACATGGAGGTGGCCGAAGGCGA-
droPer2 scaffold_0:8512887-8513050 - TGGGCAAGCCGCTCTACATCAAATTCACTCG---CAAGAGCAA---TGCCCA---CGTGAGTGCACACTCA-T---ATATCTTTCACT-A---------------------------------ATGTGAT-TACTTACTG----------TTTGTTCTC-----TGCTTT--TATTTAGTCCAAACACAATGG----CCAGTTGACTGGCAACATGGAGGTGGCCGAAGGCGA-
droAna3 scaffold_13340:9887198-9887355 + TGGGCAAGCCCCTCTACATCAAATTCACACG---CAAGAACAA---AGCTCA---TGTAAGTGTGCTATAAAAATA-------------------CAT-CTG---------TATTCGG-TT-TTAAGTAAC-------------TCC--------------TT--CTCTT--CCAACAGGCCAACCACAATGG----TCAGTTGACTGGCAACATGGAGTTGGCTGAAGGCGA-
droBip1 scf7180000396691:2587793-2587946 + TGGGCAAGCCTCTCTACATCAAATTCACACG---AAAGAACAA---AGCTCA---CGTAAGTGTGTTGTAGAAATA---TG-------TAA--TTGG----------------------TT-GTTAGTAAG-------------TCTT-----------CA-----TATTCT--CACAGGCCAACCACAATGG----TCAGTTGACTGGCAACATGGAGTTGGCTGAAGGCGA-
droKik1 scf7180000302639:2535505-2535675 - TGGGCAAGCCCCTCTACATCAAGTTCACCCG---CAAGAACAA---TGCTCA---TGTAGGTCTCCCTCAA---CA---CT-------GAGA------TCCGCT------------CCTCTTAATATTAAT-ATTAATTT----------GTTATTCCC-----TTCTCC--TGGACAGGCCAAGCACAATGG----CCAGCTGACCGGCAACATGGAGCTGGCCGAAGGCGA-
droFic1 scf7180000453800:692810-692964 - TGGGCAAGCCCCTCTACATTAAGTTCACCCG---CAAGAACAA---GGCTCA---TGTAAGTCTCCTGAA---------------------A------GCTGCTTAATCTAAC------CTTGGGAATAAT----------------A-----------AATT---TTCTTT--GGTAGGCCAACCACAACGG----TCAGCTGACCGGCAACATTGAACTGGCCGAGGGCGA-
droEle1 scf7180000491008:2033024-2033191 + TGGGCAAACCCCTGTACATCAAGTTCACCCG---CAAAAACAA---CGATCA---TGTAGGTTTACTATGAGACTT---AC-------TTAGGTTGAG---------------------CT-TGTATTTAT-------------CACATTTTATTTA--TACT---TTTC--CCGGTAGGCCAAACACAATGG----TCAGCTGACCGGCAACATTGAGCTGGCCGAGGGTGA-
droRho1 scf7180000780017:16349-16516 - TGGGCAAGCCCCTGTACATCAAGTTCACCCG---CAAAAACAA---CGCTCA---TGTAGGTTTCCTATGAGGGTA---AA-------ATGACTTGAA---------------------CT-TGTATTAAT-------------AATATATTTATTTTA-----ATTTCC--CCGGTAGGCTAAGCACAATGG----TCAGTTGACCGGCAACATTGAGCTGGCCGAAGGCGA-
droBia1 scf7180000299102:1742079-1742237 + TGGGCAAGCCCCTGTACATCAAGTTCACCCG---CAAGAACAA---GGCTCA---TGTGGGTTTTCTGTAA--ATG---GT-------AAAA------GCTTTT------------GATCTTGGTATTAAT-------------CGTG-----------TA-----TTATTT--TGTAGGCCAACCACAATGG----TCAGCTGACCGGCAACATTGAACTGGCCGAGGGCGA-
droTak1 scf7180000415878:621866-621946 + T----------------------------------------------------------------------------------------------------------------------------ATTAAT-------CT----------TTGGTTCTT-----ATTCCC--CCGTTAGGTCAACCACAATGG----TCAGCTGACCGGCAACATTGAACTGGCCGAGGGCGA-
droEug1 scf7180000409802:1828347-1828443 + TGGGCAAGCCGCTGTACATCAAGTTCACCCG---CAAGAACAA---GGCTCA---T---------------------------------------------------------------------------------------------------------------------------GCCAACCACAATGG----TCAGCTGACCGGCAATATTGAACTGGCCGAAGGCGA-
dm3 chr3R:14216869-14217027 - TGGGCAAGCCCCTGTACATCAAGTTCACTCG---CAAAAACAA---GGCTCA---TGTGGGTTTATCATTTAATTA---TT-------TGAAGTTGGT---------------------CC-AGTATTAAT-------------TTCC-----------AATT---TTCTCT--CGCAGGCCAATCACAATGG----TCAGTTGACCGGCAACATTGAACTGGCCGAAGGCGA-
droSim2 3r:7059923-7060081 + TGGGCAAGCCCCTGTACATCAAATTCACCCG---CAAAAACAA---GGCTCA---TGTGGGTTTCTCATTTAATCA---TT-------TAAAGTTGAT---------------------CC-AGTATTAAT-------------TTCG-----------AATT---CTCTCT--CGCAGGCCAATCACAATGG----TCAGTTGACCGGCAACATGGAACTGGCCGAAGGCGA-
droSec2 scaffold_5:5678198-5678356 + TGGGCAAGCCACTGTACATCAAATTCACCCG---CAAAAACAA---GGCTCA---TGTGGGTTTCTCATTTAAATA---TT-------TTAAGCTGAT---------------------CC-AGTATTAAT-------------TGCC-----------AATT---CTCTCT--CGCAGGCCAATCACAATGG----TCAGTTGACCGGCAACATGGAACTAGCCGAAGGCGA-
droYak3 3R:2836621-2836779 - TGGGCAAGCCCCTGTACATTAAGTTCACCCG---CAAAAACAA---GGCTCA---TGTAGGTTTCTCATTTAATTG---TT-------TGGAATAGAT---------------------CC-GGTAATAAT-------------TACA-----------AATT---TTCTCT--CGCAGGCCAACCACAATGG----TCAGCTGACCGGCAACATGGAACTGGCAGAAGGCGA-
droEre2 scaffold_4770:7424601-7424761 + TTGGAAAACCTCTGTACATTAAATACCAACG---CCGCAACAG---GGTAAGTTAT-TGGGACTGGAATAA--TGA---TC-------CAA--TTG-C---------------------CT-AATAATATA-------------TCCA-----------CCTT---TAGCCT--GCTGGACCAGTGGTGGAGGTGGACGAGATCGTAGAGAAGATAGAGGTGACCACTGGCAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGGGCAAGCCGCTGTACATCAAATTCACCCGTCGCAACACCGT---TGCACA---TGTAAGTAGAGCGTCTTCAGG---TT-------GAGGGAAGCG---------------------CT-ATTGTTGAT-------------TTTT-----------TTTTTATTTTC--TGGACAGGTCAAGCACAATGG----CGAGCTGACAGGCAACATGGAACTGGCCGAGGGGGA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................GACAGGCAACATGGAACTGGCCGA.......2412.002001000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................GACAGGCAACATGGAACTG............1912.002000100000000000000000000000000000000000000000000000000000001000
.................ATCAAATTCACCCGTCGCAACACC.................................................................................................................................................................................................2412.002001000000000000000100000000000000000000000000000000000000000000
...................CAAATTCACCCGTCGCAACACCGT---T...........................................................................................................................................................................................2512.002000000000000000000010010000000000000000000000000000000000000000
.........................CACCCGTCGCAACACCGT---T...........................................................................................................................................................................................1912.002001000000000001000000000000000000000000000000000000000000000000
......................ATTCACCCGTCGCAACACCGT---TG..........................................................................................................................................................................................2312.002000000000000000000000110000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACATGGAACTGGCCGAG......1812.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAAGCACAATGG----CGAGCTGACAGGCAA......................2712.002000000000000000010000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................GACAGGCAACATGGAACTGGC..........2111.001000100000000000000000000000000000000000000000000000000000000000
..........GCTGTACATCAAATTCACCC............................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GCACAATGG----CGAGCTGACA...........................1911.001000000000000000000000000000001000000000000000000000000000000000
...GCAAGCCGCTGTACATCAAATTCACCCGT..........................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACATGGAACTGGCCGAGG.....1911.001000000000000000000000000000000000000000000000000000000000001000
......................ATTCACCCGTCGCAACACCGT---T...........................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACATGGAACTGGCCGAGGGG...2111.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................ACAATGG----CGAGCTGACAGGCAACA....................2411.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................CAAGCACAATGG----CGAGCTGACAGGCA.......................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................CACCCGTCGCAACACCGT---TGCACA---TG.................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
...............ACATCAAATTCACCCGTCGC.......................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................GTCAAGCACAATGG----CGAGCTGA.............................2211.001000000000000000000000000000000000000010000000000000000000000000
.................ATCAAATTCACCCGTCGCAACACCGT---............................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGACAGGCAACATGGAACTGGCCGAG......2611.001000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................GCACAATGG----CGAGCTGACAGGCAACATGGAACTGGC..........3611.001000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................CAACATGGAACTGGCCGAGGGG...2211.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CAATGG----CGAGCTGACAGGC........................1911.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GG----CGAGCTGACAGGCAACATGGA................2311.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................CAAGCACAATGG----CGAGCTGACAGGCAAC.....................2811.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GACAGGCAACATGGAACT.............1811.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GTCAAGCACAATGG----CGAGCT...............................2011.001000000000010000000000000000000000000000000000000000000000000000
.....................AATTCACCCGTCGCAACACCG................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.....AAGCCGCTGTACATCAAATTCACC.............................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
......AGCCGCTGTACATCAAATTCACCC............................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............TACATCAAATTCACCCGTCGCAACACCGT---............................................................................................................................................................................................2911.001000000000000000000000000001000000000000000000000000000000000000
.................ATCAAATTCACCCGTCGCAAC....................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................ATCAAATTCACCCGTCGCAACACCGT---T...........................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................CATGGAACTGGCCGAGGG....1811.001000000000000000000000000000000000000000000000000000000000000010
.........CGCTGTACATCAAATTCACCC............................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.......GCCGCTGTACATCAAATTCACCCGT..........................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
....................AAATTCACCCGTCGCAACACCGT---............................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
...................CAAATTCACCCGTCGCAACACC.................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
......................ATTCACCCGTCGCAACAC..................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GCACAATGG----CGAGCTGACAGGC........................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................CGTCGCAACACCGT---TGCACA---TGT................................................................................................................................................................................2311.001000000000000000000000000000000001000000000000000000000000000000
......AGCCGCTGTACATCAAATTCACCCGTC.........................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GACAGGCAACATGGAACTGGCCGAG......2511.001000000000000000010000000000000000000000000000000000000000000000
...................CAAATTCACCCGTCGCAACACCG................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
............................CCGTCGCAACACCGT---TGCACA---...................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
........................................................GTAAGTAGAGCGTCTTCAG...............................................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................CATGGAACTGGCCGAGGGT...1911.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TCGGCAAGCCGCTGTACATCAAAATGACCCG---CAGCAAACAGGTCGCACA---CGTAAGTGGACCGAAG-----------------------TGAA-CTCATTGA-GTATCATTG------GGATTATT-------GCTGAGATTT-----------GA-----TTTGGT--TTTAGGTCAAGCACAATGG----CGAGCTGACTGGCAACATGGAACTGGCCGAGGGCGA-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................CAATGG----CGAGCTGACTGGC........................1913.003000003
........................................................................................................................................................................................GCACAATGG----CGAGCTGACTGGC........................2212.002200000
.....................................................................................................................................................................................................................ATGGAACTGGCCGAGGGC...1812.002200000
..................................................................................................................................................................................................................AACATGGAACTGGCCGAGGGC...2112.002000002
..................................................................................................................................................................................................................AACATGGAACTGGCCGAGGGCG..2212.002100001
..........................................................................................................................................................................................ACAATGG----CGAGCTGACTGGC........................2012.002101000
........................................................................................................................................................................................................GCTGACTGGCAACATGGAACTGGCCGA.......2711.001100000
.....................................................................................................................................................................................CAAGCACAATGG----CGAGCTGA.............................2011.001100000
.........................................................................................................................................................................................CACAATGG----CGAGCTGACTGGCA.......................2211.001100000
...............ACATCAAAATGACCCG---CAGC....................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................GTCAAGCACAATGG----CGAGCTGACTG..........................2511.001100000
...GCAAGCCGCTGTACATCAAAAT.................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................GACTGGCAACATGGAACTGGCC.........2211.001100000
...........................................................................................................................................CTGAGATTT-----------GA-----TTTGGT--TTTA........................................................2111.001000010
........................................................................................................................................................................................................GCTGACTGGCAACATGGAACTGGCCG........2611.001100000
.........................................................................................................................................................................................CACAATGG----CGAGCTGACTGGCAACATG..................2711.001100000
.................................................................................................................................................................................................................CAACATGGAACTGGCCGAGGGC...2211.001100000
.............GTACATCAAAATGACCCG---C.......................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................ACTGGCAACATGGAACTGGC..........2011.001100000
...........................................................................................................................................................................................CAATGG----CGAGCTGACTGGCAACATGGA................2711.001000001
............................................................................................................................................................................................AATGG----CGAGCTGACTGGC........................1811.001100000
..............................................................................................................................................................................................TGG----CGAGCTGACTGGCAACATGGAA...............2511.001000001
..........................ACCCG---CAGCAAACAGGTCGCACA---C..................................................................................................................................................................................2411.001100000
.............GTACATCAAAATGACCCG---CAGC....................................................................................................................................................................................................2211.001100000
.....................AAATGACCCG---CAGCAAACAGGTCGC.........................................................................................................................................................................................2511.001100000
......................................................................................................................................................................................AAGCACAATGG----CGAGCTGACTGGCA.......................2511.001100000
...................................................................................................................................................................................GTCAAGCACAATGG----CGAGCTG..............................2111.001100000
..................................................................................................................................................................................................................AACATGGAACTGGCCGAGGG....2011.001100000
.....................................................................................................................................................................................CAAGCACAATGG----CGAGCTG..............................1911.001100000
.............................................................................................................................................................................................ATGG----CGAGCTGACTGGCAACATGG.................2411.001100000
...............................................................................................................................................................................................GG----CGAGCTGACTGGCAACAT...................2011.001100000
.............................CG---CAGCAAACAGGTCGCACA---CGT................................................................................................................................................................................2311.001000100
............................................................................................................................................................................................AATGG----CGAGCTGACTGGCAACATGG.................2511.001000100
.............................CG---CAGCAAACAGGTCGCACA---...................................................................................................................................................................................2011.001000001
............................................................................................................................................................................................AATGG----CGAGCTGACTGGCAACATG..................2411.001000001
droGri2
TGGGCAAGCCGCTGTATATTTTAGCCACTCGTCGCAAGACTGT---CGCACA---TGTAAGTCGTCGTCAT-----ATGTTCTTTGCTTAAAGTAGAT---------------------TT-----TTAT-TATTTTTTA----------TTGATGTTC-----AATTCT--TGGGCAGGTCAAGCACAATGG----CGAGTTGACAGGCAACATGGAACTGGCCGAGGGAGA-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................ACATGGAACTGGCCGAGGGA...2011.00101
...................................................................................................................................................................................................................ACATGGAACTGGCCGAGGGAGA-2211.00110
.....................................................................................................................................................................................................................ATGGAACTGGCCGAGGGAGA-2011.00101
droWil2
TGGGCAAGCCTTTGTATATCAAATTCACCCG---GAAGAACAC---TGCTCA---TGTGAGTACAAAGAAA---TA---AT-------GAAT------A------------TCTAAGGATTTATTATAAAT-------------TGTA-----------AAC--GTATTT--TGGACAGGCCAATCACAATGG----TGAACTGACAGGCAACATAGAGCTGGCCGAAGGTGA-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................TGG----TGAACTGACAGGCAACATAGAGC..............26113.0013013000
........................................................................................................................................................................................TCACAATGG----TGAACTGACAGGCAACA....................2618.00808000
..................................................................................................................................................................................................................AACATAGAGCTGGCCGAAGGT...2115.00501220
..................TCAAATTCACCCG---GAAGAACAC---TGC.........................................................................................................................................................................................2515.00505000
...........................................................................................................................................................................................CAATGG----TGAACTGACAGG.........................1815.00503020
..............................................................................................................................................................................................TGG----TGAACTGACAGGCAACATAGAGCT.............2715.00505000
......................................................................................................................................................................................................GAACTGACAGGCAACATAGAGCTGGC..........2614.00411020
................TATCAAATTCACCCG---GAAGAACAC---TGC.........................................................................................................................................................................................2714.00404000
.....................................................................................................................................................................................................TGAACTGACAGGCAACATAGAGCT.............2413.00303000
.................................................................................................................................................................................................................CAACATAGAGCTGGCCGAAGGT...2213.00300120
......................ATTCACCCG---GAAGAACAC---TGCTCA---TGCC...............................................................................................................................................................................2813.00310020
..........................................................................................................................................................................................................TGACAGGCAACATAGAGCTGGCCGAAG.....2713.00303000
.....................................................................................................................................................................................................................ATAGAGCTGGCCGAAGGT...1813.00301020
................................................................................................................................................................................................................GCAACATAGAGCTGGCCGAAGGT...2313.00300030
...........................................................................................................................................................................................CAATGG----TGAACTGACAGGC........................1913.00301020
.................................................................................................................................................................................................................CAACATAGAGCTGGCCGAAGGTGA-2412.00210100
......................................................................................................................................................................................AATCACAATGG----TGAACTGACAGG.........................2312.00201010
............................CCG---GAAGAACAC---TGCTCA---TGCC...............................................................................................................................................................................2212.00220000
............TGTATATCAAATTCACCCG---GAAGAACAC---............................................................................................................................................................................................2812.00202000
...................................................................................................................................................................................GCCAATCACAATGG----TGAACTGACAGGC........................2712.00202000
...........................................................................................................................................................................................CAATGG----TGAACTGACAGGCAACAT...................2412.00211000
.........................................................................................................................................................................................CACAATGG----TGAACTGACAGGC........................2112.00201010
...................................................................................................................................................................................................................ACATAGAGCTGGCCGAAGGTGA-2212.00201010
.........................CACCCG---GAAGAACAC---TGCTCA---TG.................................................................................................................................................................................2312.00201010
.....................................................................................................................................................................................................TGAACTGACAGGCAACATAGAGCTGGCC.........2812.00201100
...........................CCCG---GAAGAACAC---TGCTCA---...................................................................................................................................................................................1912.00211000
.......................................................................................................................................................................................ATCACAATGG----TGAACTGACAGGC........................2312.00200020
......................................................................................................................................................................................................GAACTGACAGGCAACATAGAGCT.............2312.00200110
.......................................................................................................................................................................................ATCACAATGG----TGAACTGACAGG.........................2211.00100010
.....................................................................................................................................................................................................TGAACTGACAGGCAACATAGAA...............2211.00110000
................................................................................................................................................................................................G----TGAACTGACAGGCAACATAGAGCTGG...........2711.00100100
.......................................................................................................................................................................................................AACTGACAGGCAACATAGA................1911.00100010
........................................................................................................................................................................................................ACTGACAGGCAACATAGAGCTGGCC.........2511.00101000
.........................................................................................................................................................................................CACAATGG----TGAACTGACA...........................1811.00100010
..............................G---GAAGAACAC---TGCTCA---TGCC...............................................................................................................................................................................2011.00110000
...................................................................................................................................................................................................................ACATAGAGCTGGCCGAAGGT...2011.00100010
...........................................................................................................................................................................................................GACAGGCAACATAGAGCTG............1911.00101000
...............................................................................................................................................................................................GG----TGAACTGACAGGCAACA....................1911.00101000
.....................................................................................................................................................................................................................ATAGAGCTGGCCGAAGGTGA-2011.00101000
..............................................................................................................................................................................................................AGGCAACATAGAGCTGGC..........1811.00100010
....................................................................................................................................................................................................................CATAGAGCTGGCCGAAGGT...1911.00100010
.......................................................................................................................................................................................................................AGAGCTGGCCGAAGGTGA-1811.00100010
............TGTATATCAAATTCACCCG---GAAGAA..................................................................................................................................................................................................2511.00100100
......................................................................................................................................................................................AATCACAATGG----TGAACTGACAGGCA.......................2511.00100010
.........................CACCCG---GAAGAACAC---TGCT........................................................................................................................................................................................1911.00100010
.............GTATATCAAATTCACCCG---GAA.....................................................................................................................................................................................................2111.00100010
......AGCCTTTGTATATCAAATTCACCCG---GA......................................................................................................................................................................................................2711.00101000
....................................................................................................................................................................................................................CATAGAGCTGGCCGAAGGTGA-2111.00101000
......................ATTCACCCG---GAAGAACAC---TGCT........................................................................................................................................................................................2211.00100100
...........................................................................................................................................................................................................GACAGGCAACATAGAGCTGGCCGAAG.....2611.00100010
.....................AATTCACCCG---GAAGAACAC---TGCT........................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................AACTGACAGGCAACATAGAGCT.............2211.00101000
...............ATATCAAATTCACCCG---GAAGAACAC---T...........................................................................................................................................................................................2611.00100100
.............GTATATCAAATTCACCCG---GAAGA...................................................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................CAATCACAATGG----TGAACTGACAGGCAACA....................2911.00101000
.....................AATTCACCCG---GAAGAACAC---TGCTCA---TGCC...............................................................................................................................................................................2911.00100100
...............ATATCAAATTCACCCG---GAAGAACAC---TGCT........................................................................................................................................................................................2911.00100100
.....................................................................................................................................................................................................TGAACTGACAGGCAACATAGAGCTGG...........2611.00101000
..........................................................................................................................................................................................................TGACAGGCAACATAGAGC..............1811.00101000
.........................CACCCG---GAAGAACAC---TGCTCA---TGTGA..............................................................................................................................................................................2611.00100010
.........................................................................................................................................................................................CACAATGG----TGAACTGACAGGCAACA....................2511.00101000
.........................CACCCG---GAAGAACAC---TGCTCA---TGCC...............................................................................................................................................................................2511.00110000
.............................................................................................................................................................................................ATGG----TGAACTGACAGGCAACATAGAGC..............2711.00101000
..........................................................................................................................................................................................................TGACAGGCAACATAGAGCTGGCCGAAGG....2811.00101000
......................................................................................................................................................................................................GAACTGACAGGCAACATAGAGCTGG...........2511.00100010
...................CAAATTCACCCG---GAAGAACAC---TGCTCA---...................................................................................................................................................................................2711.00110000
.....................................................................................................................................................................................................TGAACTGACAGGCAACATAGAGC..............2311.00101000
........................................................................................................................................................................................................ACTGACAGGCAACATAGAGCT.............2111.00100010
...........................................................................................................................................................................................................GACAGGCAACATAGAGCTGGCC.........2211.00100100
......................................................................................................................................................................................AATCACAATGG----TGAACTGACAGGC........................2411.00101000
...................................................................................................................................................................................................................ACATAGAGCTGGCCGAAGG....1911.00100100
............................................................................................................................................................................................AATGG----TGAACTGACAGGCAACATAGAG...............2711.00101000
...............................................................................................................................................................................................GG----TGAACTGACAGGCAACATAGAGCT.............2611.00100010
..................................................................................................................................................................................................................AACATAGAGCTGGCCGAAGGTGA-2311.00100100
...........................................................................................................................................................................................CAATGG----TGAACTGACAGGCAAC.....................2211.00101000
...................CAAATTCACCCG---GAAGAACAC---TG..........................................................................................................................................................................................2311.00101000
..........................ACCCG---GAAGAACAC---TGCTCA---...................................................................................................................................................................................2011.00101000
.............................CG---GAAGAACAC---TGCTCA---TGC................................................................................................................................................................................2011.00100010
................TATCAAATTCACCCG---GAAGAACAC---TGCT........................................................................................................................................................................................2811.00101000
............TGTATATCAAATTCACCCG---GAAG....................................................................................................................................................................................................2311.00100100
..................................GAAGAACAC---TGCTCA---TGCC...............................................................................................................................................................................1911.00110000
................TATCAAATTCACCCG---GAAGAACAC---TGCTC.......................................................................................................................................................................................2911.00101000
.........................................................................................................................................................................................................CTGACAGGCAACATAGAGCTGGC..........2311.00100010
.......................................................................................................................................................................................ATCACAATGG----TGAACTGACAGGCAACA....................2711.00101000
..................................GAAGAACAC---TGCTCA---TGC................................................................................................................................................................................1811.00100010
..................TCAAATTCACCCG---GAAGAACAC---TGCTC.......................................................................................................................................................................................2711.00101000
..................TCAAATTCACCCG---GAAGAACAC---TGG.........................................................................................................................................................................................2511.00101000
...........................................................................................................................................................................................................GACAGGCAACATAGAGCT.............1811.00100010
........................TCACCCG---GAAGAACAC---TGCTCA---TGC................................................................................................................................................................................2511.00101000
........................................................................................................................................................................................TCACAATGG----TGAACTGACAGGCAACATAG.................2911.00101000
.GGGCAAGCCTTTGTATATCAAATTCACC.............................................................................................................................................................................................................2811.00101000
.................................................................................................................................................................................................................CAACATAGAGCTGGCCGAAGGTG..2311.00100100
.............................................................................................................................................................................................................CAGGCAACATAGAGCTGGCC.........2011.00110000
..............................................................................................................................................................................................TGG----TGAACTGACAGGCAACA....................2011.00101000
.........................................................................................................................................................................................CACAATGG----TGAACTGACAGG.........................2011.00100010
dp5
TGGGCAAACCGCTCTACATCAAATTCACTCG---CAAGAGCAA---TGCCCA---CGTGAGTGCACACTCA-T---ATATCTTTCACT-A---------------------------------ATGTGAT-TACTTACTG----------TTTGTTCTC-----TGCTTT--TATTTAGTCCAAACACAATGG----CCAGTTGACCGGCAACATGGAGGTGGCCGAAGGCGA-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................GG----CCAGTTGACCGGCAACATGGAGGT.............2611.0010000100000
...............................................................................................................................................................................................................GGCAACATGGAGGTGGCCGAA......2111.0010100000000
..................................................................................................................................................................................................................AACATGGAGGTGGCCGAAG.....1911.0010100000000
........................................................................................................................................................................................................GTTGACCGGCAACATGGAGGTG............2211.0010100000000
..............................................................................................................................................................................................TGG----CCAGTTGACCGGCAACA....................2011.0010100000000
.........................CACTCG---CAAGAGCAA---TGCCCA---CTCC...............................................................................................................................................................................2511.0010100000000
.....................AATTCACTCG---CAAGAGCAA---TGCC........................................................................................................................................................................................2311.0010010000000
.................ATCAAATTCACTCG---CAAGAGC.................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................CAACATGGAGGTGGCCGAAGGC...2211.0010100000000
......................................................................................................................................................................................AAACACAATGG----CCAGTTGACCGG.........................2311.0010100000000
......................................................................................................................................................................................................CAGTTGACCGGCAACATGGAGGTGGC..........2611.0010000100000
.....................................................................................................................................................................................................................ATGGAGGTGGCCGAAGGC...1811.0010000100000
.............CTACATCAAATTCACTCG---CAAGA...................................................................................................................................................................................................2311.0010100000000
........CCGCTCTACATCAAATTCACT.............................................................................................................................................................................................................2111.0010010000000
...........CTCTACATCAAATTCACTCG---CAAGAG..................................................................................................................................................................................................2611.0010000100000
...........................................................................................................................................................................................................GACCGGCAACATGGAGGTGGCC.........2211.0010010000000
..................................................................................................................................................................................................................AACATGGAGGTGGCCGAAGGCGA-2311.0010010000000
..........................................................................................................................................................................................ACAATGG----CCAGTTGACCGG.........................1911.0010001000000
droPer2
TGGGCAAGCCGCTCTACATCAAATTCACTCG---CAAGAGCAA---TGCCCA---CGTGAGTGCACACTCA-T---ATATCTTTCACT-A---------------------------------ATGTGAT-TACTTACTG----------TTTGTTCTC-----TGCTTT--TATTTAGTCCAAACACAATGG----CCAGTTGACTGGCAACATGGAGGTGGCCGAAGGCGA-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................AAACACAATGG----CCAGTTGACTG..........................2215.005500000
.......................................................................................................................................................................................................AGTTGACTGGCAACATGGAGGT.............2213.003200001
...................................................................................................................................................................................................................ACATGGAGGTGGCCGAAGGCG..2112.002020000
.....................................................................................................................................................................................CAAACACAATGG----CCAGTTGACTG..........................2311.001100000
........................................................................................................................................................................................................GTTGACTGGCAACATGGAGGT.............2111.001010000
.............................................................................................................................................................................................................CTGGCAACATGGAGGTGGCCGAAGG....2511.001010000
......................................................................................................................................................................................AAACACAATGG----CCAGTTGACT...........................2111.001010000
..................................................................................................................................................................................................................AACATGGAGGTGGCCGAAGGC...2111.001001000
.............CTACATCAAATTCACTCG---CAAG....................................................................................................................................................................................................2211.001010000
.....AAGCCGCTCTACATCAAATT.................................................................................................................................................................................................................2011.001001000
.........................................................................................................................................................................................................TTGACTGGCAACATGGAGGT.............2011.001001000
......................................................................................................................................................................................................CAGTTGACTGGCAACATGGA................2011.001010000
droAna3
TGGGCAAGCCCCTCTACATCAAATTCACACG---CAAGAACAA---AGCTCA---TGTAAGTGTGCTATAAAAATA-------------------CAT-CTG---------TATTCGG-TT-TTAAGTAAC-------------TCC--------------TT--CTCTT--CCAACAGGCCAACCACAATGG----TCAGTTGACTGGCAACATGGAGTTGGCTGAAGGCGA-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................AGTTGACTGGCAACATGGAGT..............2113.003110010
..................................................................................................................................................................................................................AACATGGAGTTGGCTGAAGGCGA-2313.003201000
.......................................................................................................................................................................................................AGTTGACTGGCAACATGGAGTT.............2212.002101000
........................................................................................................................................................................................................GTTGACTGGCAACATGGAGT..............2012.002011000
........................................................................................................................................................................................................GTTGACTGGCAACATGGAGTTGGCT.........2511.001010000
.......................................................................................................................................................................................ACCACAATGG----TCAGTTGACTGGCAACAT...................2811.001100000
................................................................................................................................................................................................................GCAACATGGAGTTGGCTGAAGGCG..2411.001000010
..............................................................................................................................................................................................TGG----TCAGTTGACTGGCAACATGGAGT..............2611.001100000
................CATCAAATTCACACG---CAAGA...................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................AATGG----TCAGTTGACTGGCAAC.....................2111.001010000
......................ATTCACACG---CAAGAACAA---AGCTCA---TGCC...............................................................................................................................................................................2811.001010000
..........CCTCTACATCAAATTCACACG---CAAGAACA................................................................................................................................................................................................2911.001100000
......................ATTCACACG---CAAGAACAA---AGCT........................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................TTGACTGGCAACATGGAGTTGGCTG........2511.001010000
......................................................................................................................................................................................AACCACAATGG----TCAGTTGACTGGC........................2411.001001000
.............................................................................................................................................................................................ATGG----TCAGTTGACTGGCAACATGGAGTT.............2811.001010000
..................TCAAATTCACACG---CAAGAACAA---AG..........................................................................................................................................................................................2411.001100000
..........................................................................................................................................................................................................TGACTGGCAACATGGAGT..............1811.001000010
.....................................................................................................................................................................................................................ATGGAGTTGGCTGAAGGCGA-2011.001010000
...........................................................................................................................................................................................................GACTGGCAACATGGAGTTGGCT.........2211.001100000
......................................................................................................................................................................................................CAGTTGACTGGCAACATGGAGTTGGCC.........2711.001010000
........................................................................................................................................................................................................GTTGACTGGCAACATGGAGTT.............2111.001000010
................CATCAAATTCACACG---CAAG....................................................................................................................................................................................................1911.001010000
.............CTACATCAAATTCACACG---CAAGA...................................................................................................................................................................................................2311.001001000
..........................................................................................................................................................................................ACAATGG----TCAGTTGACTGGCAAC.....................2311.001010000
................................................................................................................................................................................................................GCAACATGGAGTTGGCTGAAGGCGA-2511.001001000
......................................................................................................................................................................................AACCACAATGG----TCAGTTGACTG..........................2211.001000001
.............................................................................................................................................................................................................CTGGCAACATGGAGTTGGCT.........2011.001010000
...............................................................................................................................................................................................GG----TCAGTTGACTGGCAACATGGAGTTG............2711.001000010
.....................................................................................................................................................................................CAACCACAATGG----TCAGTTGACT...........................2211.001010000
...............ACATCAAATTCACACG---CAAG....................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................TGGAGTTGGCTGAAGGCGA-1911.001010000
droBip1
TGGGCAAGCCTCTCTACATCAAATTCACACG---AAAGAACAA---AGCTCA---CGTAAGTGTGTTGTAGAAATA---TG-------TAA--TTGG----------------------TT-GTTAGTAAG-------------TCTT-----------CA-----TATTCT--CACAGGCCAACCACAATGG----TCAGTTGACTGGCAACATGGAGTTGGCTGAAGGCGA-SizeHit CountTotal NormTotal
No Reads
droKik1
TGGGCAAGCCCCTCTACATCAAGTTCACCCG---CAAGAACAA---TGCTCA---TGTAGGTCTCCCTCAA---CA---CT-------GAGA------TCCGCT------------CCTCTTAATATTAAT-ATTAATTT----------GTTATTCCC-----TTCTCC--TGGACAGGCCAAGCACAATGG----CCAGCTGACCGGCAACATGGAGCTGGCCGAAGGCGA-SizeHit CountTotal NormTotal
No Reads
droFic1
TGGGCAAGCCCCTCTACATTAAGTTCACCCG---CAAGAACAA---GGCTCA---TGTAAGTCTCCTGAA---------------------A------GCTGCTTAATCTAAC------CTTGGGAATAAT----------------A-----------AATT---TTCTTT--GGTAGGCCAACCACAACGG----TCAGCTGACCGGCAACATTGAACTGGCCGAGGGCGA-SizeHit CountTotal NormTotal
No Reads
droEle1
TGGGCAAACCCCTGTACATCAAGTTCACCCG---CAAAAACAA---CGATCA---TGTAGGTTTACTATGAGACTT---AC-------TTAGGTTGAG---------------------CT-TGTATTTAT-------------CACATTTTATTTA--TACT---TTTC--CCGGTAGGCCAAACACAATGG----TCAGCTGACCGGCAACATTGAGCTGGCCGAGGGTGA-SizeHit CountTotal NormTotal
No Reads
droRho1
TGGGCAAGCCCCTGTACATCAAGTTCACCCG---CAAAAACAA---CGCTCA---TGTAGGTTTCCTATGAGGGTA---AA-------ATGACTTGAA---------------------CT-TGTATTAAT-------------AATATATTTATTTTA-----ATTTCC--CCGGTAGGCTAAGCACAATGG----TCAGTTGACCGGCAACATTGAGCTGGCCGAAGGCGA-SizeHit CountTotal NormTotal
No Reads
droBia1
TGGGCAAGCCCCTGTACATCAAGTTCACCCG---CAAGAACAA---GGCTCA---TGTGGGTTTTCTGTAA--ATG---GT-------AAAA------GCTTTT------------GATCTTGGTATTAAT-------------CGTG-----------TA-----TTATTT--TGTAGGCCAACCACAATGG----TCAGCTGACCGGCAACATTGAACTGGCCGAGGGCGA-SizeHit CountTotal NormTotal
No Reads
droTak1
T----------------------------------------------------------------------------------------------------------------------------ATTAAT-------CT----------TTGGTTCTT-----ATTCCC--CCGTTAGGTCAACCACAATGG----TCAGCTGACCGGCAACATTGAACTGGCCGAGGGCGA-SizeHit CountTotal NormTotal
No Reads
droEug1
TGGGCAAGCCGCTGTACATCAAGTTCACCCG---CAAGAACAA---GGCTCA---T---------------------------------------------------------------------------------------------------------------------------GCCAACCACAATGG----TCAGCTGACCGGCAATATTGAACTGGCCGAAGGCGA-SizeHit CountTotal NormTotal
No Reads
dm3
TGGGCAAGCCCCTGTACATCAAGTTCACTCG---CAAAAACAA---GGCTCA---TGTGGGTTTATCATTTAATTA---TT-------TGAAGTTGGT---------------------CC-AGTATTAAT-------------TTCC-----------AATT---TTCTCT--CGCAGGCCAATCACAATGG----TCAGTTGACCGGCAACATTGAACTGGCCGAAGGCGA-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................TCAAGTTCACTCG---CAAAAACAA---GGCT........................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000200000
..........................................................................................................................................................................................ACAATGG----TCAGTTGACCGGCAAC.....................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GGCAACATTGAACTGGCCGAAGGC...2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TGG----TCAGTTGACCGGCAACATTGAACT.............2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................CATCAAGTTCACTCG---CAAAAACAA---GGC.........................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TGG----TCAGTTGACCGGCAACATTGAAC..............2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TCAGTTGACCGGCAACATTGAACTGGCC.........2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000002110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CAGTTGACCGGCAACATT..................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAATCACAATGG----TCAGTTGACCGGC........................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCAAGTTCACTCG---CAAAAA..................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................ACATTGAACTGGCCGAAG.....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................TCAAGTTCACTCG---CAAAAACAA---GGC.........................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACATTGAACTGGCCGAA......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AATGG----TCAGTTGACCGGCAAC.....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ATTGAACTGGCCGAAGGCGA-2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCACAATGG----TCAGTTGACCGGCA.......................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................ATGG----TCAGTTGACCGGCAACATTGAACTG............2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACATCAAGTTCACTCG---CAAAAACAA---GGC.........................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GACCGGCAACATTGAACTGGCCGAAG.....2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCACAATGG----TCAGTTGACCGGCAA......................2411.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................ACATTGAACTGGCCGAAGG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................ACAATGG----TCAGTTGACCGGC........................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCTGTACATCAAGTTCACTCG---CAAAAA..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CATTGAACTGGCCGAAGGCGA-2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................CAGTTGACCGGCAACATTGAACT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGACCGGCAACATTGAACT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCACTCG---CAAAAACAA---GGCTCA---TGCC...............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGACCGGCAACATTGAAC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TACATCAAGTTCACTCG---CAAAAACAA---GGC.........................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TAAT-------------TTCC-----------AATT---TTCTCT--CGCA........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GACCGGCAACATTGAACTGGCC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TACATCAAGTTCACTCG---CAAAAACAA---GGCT........................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CACAATGG----TCAGTTGACCGGCAACATT..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CATCAAGTTCACTCG---CAAAAACAA---GGCT........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................CAATCACAATGG----TCAGTTGACCGGCA.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCAAGCCCCTGTACATCAAGTTC................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTACATCAAGTTCACTCG---C.......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CTGTACATCAAGTTCACTC............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................GGCAACATTGAACTGGCCGAA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCAAGCCCCTGTACATCAA....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACATTGAACTGGCCGAAGGC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCAAGCCCCTGTACATCAAGTTCACT.............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCACAATGG----TCAGTTGACCGGCAACA....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................TGACCGGCAACATTGAACTGGCCGAAGG....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AATCACAATGG----TCAGTTGACCA..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................GCCAATCACAATGG----TCAGTTGACCGGC........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CATCAAGTTCACTCG---CAAC....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCAAGCCCCTGTACATCAAGTTCAC..............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGACCGGCAACATTGAACTGGCCGAA......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCACAATGG----TCAGTTGACCGGC........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTCACTCG---CAAAAACAA---GGCTCA---TGC................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCAAGCCCCTGTACATCAAGTT.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACATTGAACTGGCCGAAGGCGA-2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CAGTTGACCGGCAACATTGAACTGGCC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTGAACTGGCCGAAGGCGA-1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGCAAGCCCCTGTACATCAA....................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................T-------TGAAGTTGGT---------------------CC-AGTATTAAT-------------TTC.......................................................................................2511.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CAACATTGAACTGGCCGAAGGCGA-2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............TGTACATCAAGTTCACTCG---CAAAAACAA---............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAGCCCCTGTACATCAAGTTC................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TT---TTCTCT--CGCAGGCCAATCACAATGG----.....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GTTGACCGGCAACATTG.................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCG---CAAAAACAA---GGCTCA---TGCC...............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGACCGGCAACATTGAACTGGCCGAAGGC...2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCAAGCCCCTGTACATCAAGTTCACTC............................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AGTTGGT---------------------CC-AGTATTAAT-------------TTCC-----------A..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTCACTCG---CAAAAACAA---GGCTCA---...................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GTTCACTCG---CAAAAACAA---GG..........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAAGTTCACTCG---CAAAAACAA---GGCTCA---...................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAAGCCCCTGTACATCAAGTTCACTCG---C.......................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTGAACTGGCCGAAGGCG..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AGTTGACCGGCAACATTGAACTGGCCGA.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GTTGACCGGCAACATTGAACT.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................ATGG----TCAGTTGACCGGCAACA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................TCACTCG---CAAAAACAA---GGCTCA---TGTGGG.............................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CAACATTGAACTGGCCGAA......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CATCAAGTTCACTCG---CAAAAACAA---GGCTC.......................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAATCACAATGG----TCAGTTG..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................AAGTTCACTCG---CAAAAACAA---GGCTC.......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAAGTTCACTCG---CAAAAACAA---GGCTC.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTACATCAAGTTCACTCG---CAAA....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................ACATTGAACTGGCCGAAGGC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............GTACATCAAGTTCACTCG---CA......................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CAACATTGAACTGGCCGAAGG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CCAATCACAATGG----TCAGTTGACCGGC........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CG---CAAAAACAA---GGCTCA---TGCCA..............................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCAAGTTCACTCG---CAAAAACAA---AAA.........................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGGCAAGCCCCTGTACATCAAATTCACCCG---CAAAAACAA---GGCTCA---TGTGGGTTTCTCATTTAATCA---TT-------TAAAGTTGAT---------------------CC-AGTATTAAT-------------TTCG-----------AATT---CTCTCT--CGCAGGCCAATCACAATGG----TCAGTTGACCGGCAACATGGAACTGGCCGAAGGCGA-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................CAGTTGACCGGCAACATGGAACT.............2316.00602400000000000000
.......................................................................................................................................................................................................AGTTGACCGGCAACATGGAACT.............2213.00302100000000000000
.............................................................................................................................................................................................ATGG----TCAGTTGACCGGCAACATGGAACT.............2813.00300000000000030000
.................................................................................................................................................................................................................CAACATGGAACTGGCCGAAGGCG..2312.00200200000000000000
...........................................................................................................................................................................................................GACCGGCAACATGGAACT.............1812.00200200000000000000
............TGTACATCAAATTCACCCG---C.......................................................................................................................................................................................................2012.00200200000000000000
.....................................................................................................................................................................................................................ATGGAACTGGCCGAAGGC...1812.00200200000000000000
..............................................................................................................................................................................................TGG----TCAGTTGACCGGCAACATGGAACT.............2712.00200000001000010000
..........................................................................................................................................................................................................TGACCGGCAACATGGAACTGGCC.........2312.00201100000000000000
........................................................................................................................................................................................................GTTGACCGGCAACATGGAACTGGCC.........2512.00202000000000000000
...........CTGTACATCAAATTCACCC............................................................................................................................................................................................................1912.00200200000000000000
....................AAATTCACCCG---CAAAAACAA---GGCT........................................................................................................................................................................................2411.00100010000000000000
............................................................................................................................................................................................AATGG----TCAGTTGACCGGCAACATGG.................2511.00100000000000100000
..................................................................................................................................................................................................................AACATGGAACTGGCCGAAG.....1911.00100000000000100000
............TGTACATCAAATTCACCCG---CAA.....................................................................................................................................................................................................2211.00100001000000000000
........................................................................................................................................................................................TCACAATGG----TCAGTTGACCG..........................2011.00100001000000000000
.....................................................................................................................................................................................CAATCACAATGG----TCAGTTGA.............................2011.00100010000000000000
...............................................................................................................................................................................................GG----TCAGTTGACCGGCAACATGGAA...............2411.00100010000000000000
.............................................................................................................................................................................................ATGG----TCAGTTGACCGGCAACATGGA................2511.00100000000001000000
........................................................................................................................................................................................................GTTGACCGGCAACATGGAACT.............2111.00101000000000000000
..................................................................................................................................................................................................................AACATGGAACTGGCCGAAGGC...2111.00101000000000000000
..............................................................................................................................................................................................TGG----TCAGTTGACCGGCAACATGGAA...............2511.00100000001000000000
...........CTGTACATCAAATTCACCCG---C.......................................................................................................................................................................................................2111.00100100000000000000
........................................................................................................................................................................................................GTTGACCGGCAACATGGAACTGGC..........2411.00100000000000100000
.......................................................................................................................................................................................................AGTTGACCGGCAACATGGAACTT............2311.00100000000000001000
......................................................................................................................................................................................................CAGTTGACCGGCAACATGGAACC.............2311.00100100000000000000
........................................................................................................................................................................................................GTTGACCGGCAACATGGAACTG............2211.00101000000000000000
droSec2
TGGGCAAGCCACTGTACATCAAATTCACCCG---CAAAAACAA---GGCTCA---TGTGGGTTTCTCATTTAAATA---TT-------TTAAGCTGAT---------------------CC-AGTATTAAT-------------TGCC-----------AATT---CTCTCT--CGCAGGCCAATCACAATGG----TCAGTTGACCGGCAACATGGAACTAGCCGAAGGCGA-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................AACATGGAACTAGCCGAAGGC...2119.0091521
..................................................................................................................................................................................................................AACATGGAACTAGCCGAAGGCGA-2313.0030120
..................................................................................................................................................................................................................AACATGGAACTAGCCGAAGGCG..2212.0020020
......................................................................................................................................................................................................CAGTTGACCGGCAACATG..................1812.0021010
....................................................................................................................................................................................................................CATGGAACTAGCCGAAGGC...1912.0020110
.................................................................................................................................................................................................................CAACATGGAACTAGCCGAAGGC...2212.0020020
.......................................................................................................................................................................................................AGTTGACCGGCAACATGG.................1812.0020020
..............................................................................................................................................................................................................CGGCAACATGGAACTAGC..........1812.0020020
......................................................................................................................................................................................................CAGTTGACCGGCAACATGGAACT.............2312.0020020
......................................................................................................................................................................................................CAGTTGACCGGCAACATGGAA...............2112.0021010
...........................................................................................................................................................................................................GACCGGCAACATGGAACT.............1812.0020020
......................................................................................................................................................................................AATCACAATGG----TCAGTTGACCGGCAACA....................2812.0022000
..................................................................................................................................................................................................................AACATGGAACTAGCCGAAG.....1912.0020020
...............................................................................................................................................................................................................GGCAACATGGAACTAGCCGAAGG....2311.0010100
..................................................................................................................................................................................................................AACATGGAACTAGCCGAAGG....2011.0010010
......................................................................................................................................................................................................CAGTTGACCGGCAACATGGAACTAGC..........2611.0010010
...............................................................................................................................................................................................................GGCAACATGGAACTAGCCGAAGGC...2411.0010010
............................................................................................................................................................................................AATGG----TCAGTTGACCGGCAACATGGAACT.............2911.0010010
.......................................................................................................................................................................................................AGTTGACCGGCAACATGGAAC..............2111.0010010
......................................................................................................................................................................................AATCACAATGG----TCAGTTGACC...........................2111.0010010
......................................................................................................................................................................................................CAGTTGACCGGCAACATGG.................1911.0011000
.......................................................................................................................................................................................................AGTTGACCGGCAACATGGAACTAGCC.........2611.0010010
......................................................................................................................................................................................................CAGTTGACCGGCAACATGGA................2011.0010100
....................................................................................................................................................................................................................CATGGAACTAGCCGAAGGCGA-2111.0010100
.................................................................................................................................................................................................................CAACATGGAACTAGCCGAAGGCGA-2411.0011000
....................................................................................................................................................................................................................CATGGAACTAGCCGAAGGCG..2011.0010001
...................................................................................................................................................................................................................ACATGGAACTAGCCGAAGGCGA-2211.0011000
.............................................................................................................................................................................................ATGG----TCAGTTGACCGGCAACATGGAACT.............2811.0010010
................CATCAAATTCACCCG---CAAAAACAA---GG..........................................................................................................................................................................................2611.0010010
..........................................................................................................................................................................................................TGACCGGCAACATGGAACTAGCCGAA......2611.0010010
................CATCAAATTCACCCG---CAAAAACAA---GGCT........................................................................................................................................................................................2811.0010010
......................................................................................................................................................................................AATCACAATGG----TCAGTTGA.............................1911.0010010
................................................................................................................................................................................................G----TCAGTTGACCGGCAACATGGAA...............2311.0010010
...................................................................................................................................................................................................................ACATGGAACTAGCCGAAGGC...2011.0010010
..........................................................................................................................................................................................ACAATGG----TCAGTTGACCGG.........................1911.0011000
..................................................................................................................................................................................................................AACATGGAACTAGCCGAA......1811.0010010
droYak3
TGGGCAAGCCCCTGTACATTAAGTTCACCCG---CAAAAACAA---GGCTCA---TGTAGGTTTCTCATTTAATTG---TT-------TGGAATAGAT---------------------CC-GGTAATAAT-------------TACA-----------AATT---TTCTCT--CGCAGGCCAACCACAATGG----TCAGCTGACCGGCAACATGGAACTGGCAGAAGGCGA-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................CAGCTGACCGGCAACATGGAACTGGC..........2613.00301100010000
..................................................................................................................................................................................................................AACATGGAACTGGCAGAAGG....2012.00201000010000
......................................................................................................................................................................................................CAGCTGACCGGCAACATGG.................1912.00202000000000
.................................................................................................................................................................................................................CAACATGGAACTGGCAGAAGGC...2212.00200200000000
...............................................................................................................................................................................................GG----TCAGCTGACCGGCAACATG..................2112.00202000000000
........................................................................................................................................................................................CCACAATGG----TCAGCTGACCGGC........................2211.00101000000000
...................................................................................................................................................................................GCCAACCACAATGG----TCAGCTGACCGGC........................2711.00101000000000
................................................................................................................................................................................................G----TCAGCTGACCGGCAACATGGAAC..............2411.00101000000000
...........................................................................................................................................................................................CAATGG----TCAGCTGACCGGCAACATG..................2511.00101000000000
...............................................................................................................................................................................................GG----TCAGCTGACCGGCAACATGGA................2311.00101000000000
......................................................................................................................................................................................................CAGCTGACCGGCAACATGGAAC..............2211.00100100000000
......................................................................................................................................................................................................CAGCTGACCGGCAACATGGAACT.............2311.00110000000000
........CCCCTGTACATTAAGTTCACCCG---C.......................................................................................................................................................................................................2411.00101000000000
...............................................................................................................................................................................................GG----TCAGCTGACCGGCAACATGG.................2211.00101000000000
.............................................................................................................................................................................................................CCGGCAACATGGAACTGG...........1811.00101000000000
..............................................................................................................................................................................................TGG----TCAGCTGACCGGCAACATGG.................2311.00101000000000
..............................................................................................................................................................................................................CGGCAACATGGAACTGGCAGAAGGC...2511.00101000000000
.........................CACCCG---CAAAAACAA---GGCTCA---TGC................................................................................................................................................................................2411.00100100000000
...........................................................................................................................................................................................................GACCGGCAACATGGAACTGGCAGAAGG....2711.00101000000000
................CATTAAGTTCACCCG---CAAAAAC.................................................................................................................................................................................................2211.00100100000000
.....................AGTTCACCCG---CAAAAACAA---GGCTCA---TG.................................................................................................................................................................................2711.00101000000000
................CATTAAGTTCACCCG---CAAAAACAA---G...........................................................................................................................................................................................2511.00101000000000
..GGCAAGCCCCTGTACATTAAGTT.................................................................................................................................................................................................................2311.00101000000000
...............................................................................................................................................................................................................GGCAACATGGAACTGGCAGAAGGC...2411.00100100000000
..............................G---CAAAAACAA---GGCTCA---TGCC...............................................................................................................................................................................2011.00100100000000
................................................................................................................................................................................................G----TCAGCTGACCGGCAACATG..................2011.00100010000000
......................................................................................................................................................................................................CAGCTGACCGGCAACATGGAACTGGCA.........2711.00100000010000
...GCAAGCCCCTGTACATTAA....................................................................................................................................................................................................................1911.00101000000000
................................................................................................................................................................................................G----TCAGCTGACCGGCAACATC..................2011.00101000000000
.........CCCTGTACATTAAGTTCACCCG---C.......................................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................AGCTGACCGGCAACATGGAACT.............2211.00100000010000
......AGCCCCTGTACATTAAGT..................................................................................................................................................................................................................1811.00101000000000
droEre2
TTGGAAAACCTCTGTACATTAAATACCAACG---CCGCAACAG---GGTAAGTTAT-TGGGACTGGAATAA--TGA---TC-------CAA--TTG-C---------------------CT-AATAATATA-------------TCCA-----------CCTT---TAGCCT--GCTGGACCAGTGGTGGAGGTGGACGAGATCGTAGAGAAGATAGAGGTGACCACTGGCAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................GGACGAGATCGTAGAGAAGATA..................2212.0022000000
..............................................................................................................................................................................................................AGAGAAGATAGAGGTGACCACTG.....2311.0010100000
..........................................................................................................................................................................CT--GCTGGACCAGTGGTGGAGGT........................................2211.0010001000
.................................................................................................................................................................................................TGGACGAGATCGTAGAGAAGAT...................2211.0010000100
........................................................................................................................................................................................................GATCGTAGAGAAGATAGA................1811.0011000000
....AAAACCTCTGTACATTAAATACCAACG---C.......................................................................................................................................................................................................2811.0011000000
...........CTGTACATTAAATACCAACG---CC......................................................................................................................................................................................................2211.0011000000
................................................................................................................................................................................................GTGGACGAGATCGTAGAGAAG.....................2111.0010000100
.............................................................................................................................................................................................GAGGTGGACGAGATCGTAGA.........................2011.0011000000
...............................................................................................................................................................................................GGTGGACGAGATCGTAGA.........................1811.0010001000
.............GTACATTAAATACCAACG---CCGCAAC.................................................................................................................................................................................................2511.0010100000
...............................................................................................................................................................................................GGTGGACGAGATCGTAGAG........................1911.0010000100
......................ATACCAACG---CCGCAACAG---GCC.........................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................GACGAGATCGTAGAGAAGATAGA................2311.0010000100
.................................................................................................................................................................................GGACCAGTGGTGGAGGTGGACGAG.................................2411.0011000000
...............ACATTAAATACCAACG---CCGC....................................................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................GGACGAGATCGTAGAGAAGATAGAG...............2511.0011000000

Generated: 05/17/2015 at 03:52 AM