ID:

dvi_3871

 Coordinate:

scaffold_12855:4330765-4330915 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_10717:3]; CDS [Dvir\GJ10817-cds]; intron [Dvir\GJ10817-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAGATAATGAAATATGTGAACAGACGGCCGTTGAATAAGCTAATCAGCAAAAGAGGTCGGCGGTTCAATTCGCGGGTCAAACGATGGGCTTTGGCTTTGCTGCGACCTTACCTTATCACATTCTTTTCTATTTCAATTGAAAAGCCATTCCTTGTAATTATAATTAATTTAATTATTATTCTTATTATACTTTATGTTAGGGTCTCGCCTTTACACATGAGGAGCGCCAGGTGTTGGGCATTCATGGCCT
**************************************************...(((((((((((......))))((((((((........)))))))).....))))))).............((((((..........)))))).(((....((((((......((((......)))).....))))))....)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060666
160_males_carcasses_total
 M061
embryo
 SRR060659
Argentina_testes_total
 GSM1528803
follicle cells		 SRR060668
160x9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 M027
male body		 M028
head
 V047
embryo
 SRR060661
160x9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 V053
head
 SRR060672
9x160_females_carcasses_total
 M047
female body
 SRR060656
9x160_ovaries_total
 SRR060657
140_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060658
140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR1106728
larvae
 SRR060680
 9xArg_testes_total
 SRR1106727
larvae
...................................................AAGAGGTCATCGGTTCGATTC................................................................................................................................................................................... 21 3 3 40.33 121 72 8 0 2 1 4 0 10 6 0 0 3 0 1 0 3 0 0 0 0 2 2 2 1 1 1 1 1 0 0 0
.........................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTGGGC........... 23 0 1 6.00 6 1 0 2 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTGGGCA.......... 23 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTG.............. 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CACATGAGGAGCGCCAGGTGTTGGGC........... 26 0 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AAATGTGTGAACGGACGGCCGT........................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GGAGCGCCAGGTGTTGGG............ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GAGGAGCGCCAGGTGTTGGGC........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GAAGAGGTCGTCGGTTCGATTC................................................................................................................................................................................... 22 3 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGCGCCAGGTGTTGGGCATTCAT..... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTTGGGCA.......... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AAGAGGTCCTCGGTTCGATTC................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GAGGAGCGCCAGGTGTTGG............. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTTG.............. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CTTTACACATGAGGAGCGCCAGGTGT................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTGGGC........... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AGGAGCGCCAGGTGTTGGGCA.......... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CAGGTGTTGGGCATTCATGGC.. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGGTGTTGGGCATTCATGGC.. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GGTGTTGGGCATTCATGGCC. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGT................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTG.............. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTTGGGC........... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GAGCGCCAGGTGTTGGGCATTCATGGC.. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTT............... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTT............... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTGG............. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CATGAGGAGCGCCAGGTG................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CCAGGTGTTGGGCATTCATGGCC. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTCTCGCCTTTACACATGAGGAGCGCCA..................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTGGGCATTC....... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CACATGAGGAGCGCCAGGTGTT............... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGATGAGCGCCAGGTGTTGGGC........... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTGGG............ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGGGTCGGCGGTTCAAGTC................................................................................................................................................................................... 19 2 4 0.75 3 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GATGAGTGCTAGGTGTTGG............. 19 3 20 0.60 12 0 0 0 4 0 0 0 0 0 0 1 2 0 1 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0
..................................................AAAGAGGTCATCGGTTCGATTC................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AAACGATGGGCTTGGACT.......................................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AAGAGGTCATCGGTTCAATT.................................................................................................................................................................................... 20 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AGAGGTCGTCGGTTCGATTC................................................................................................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AGAGGTCGGGGGTTCGAT..................................................................................................................................................................................... 18 2 7 0.29 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................AGAGGTCATCGGTTCAATTC................................................................................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AGGAGGTCGGAGGTTCAA...................................................................................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGGGTCGGCGGTTCAAGT.................................................................................................................................................................................... 18 2 8 0.25 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GAGGTCGGCGGTTCTATCCC.................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AGGAGGTCGACGGTTCAAGTC................................................................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AAGAGGTCACCGGTTCGATTC................................................................................................................................................................................... 21 3 12 0.17 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AGGAGGTCAGCGGTTCGAT..................................................................................................................................................................................... 19 3 20 0.15 3 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTACACCTGGGGGGCGCCA..................... 19 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AAGAGGTCAGCGGTTCGATC.................................................................................................................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GAGGTCTCCGGTTCGATTCG.................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GATGAGTGCTAGGTGTTGGG............ 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................GGGGTCGGCGGTTCTATCC................................................................................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AGAGGTCCGCGGTTC........................................................................................................................................................................................ 15 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................GCATTGCCGCGACCCTACC.......................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................AGAGGTCGGCAGTTCAAC..................................................................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GAGGTCTGCGGTTCGATTCC.................................................................................................................................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AGGTCCTCGGTTCAATTC................................................................................................................................................................................... 18 2 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CGGACGGTCGATGAATAAG................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GAGGTCTCCGGTTCTATTC................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................GAGGTCTCCGGTTCAATTC................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................GATGGGTATTGGCTCTGCT..................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................AGGAGGTCGGAGGTTC........................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................TAGGTCCTCGGTTCAATTC................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GTGGTCGGAGGTTCAAGTC................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AGAGGTCTCCGGTTCCATTC................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GAGGTCATCGGTTCTATTC................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGTCTATTACTTTATACACTTGTCTGCCGGCAACTTATTCGATTAGTCGTTTTCTCCAGCCGCCAAGTTAAGCGCCCAGTTTGCTACCCGAAACCGAAACGACGCTGGAATGGAATAGTGTAAGAAAAGATAAAGTTAACTTTTCGGTAAGGAACATTAATATTAATTAAATTAATAATAAGAATAATATGAAATACAATCCCAGAGCGGAAATGTGTACTCCTCGCGGTCCACAACCCGTAAGTACCGGA
**************************************************...(((((((((((......))))((((((((........)))))))).....))))))).............((((((..........)))))).(((....((((((......((((......)))).....))))))....)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060681
Argx9_testes_total
 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 M027
male body		 SRR060676
9xArg_ovaries_total
...........................................................................CCAGTTTGCTACCCGATAC............................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CCAGAGCGGCAAGGTGTA................................ 18 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATTATTAATAAGAATAATAT............................................................. 20 1 10 0.20 2 0 0 1 1 0 0 0 0 0 0
.......................................................................................................................GTAAGAAAAGAAGAAGTTA................................................................................................................. 19 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................TCCGGTAAGGAACTTTAA........................................................................................... 18 2 14 0.07 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................TTATTAATAAGAATAATAT............................................................. 19 1 15 0.07 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................AACCGAAAAGACCCCGGAAT............................................................................................................................................ 20 3 17 0.06 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................TAATTATTAATAAGAATAATAT............................................................. 22 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..........................................................GCCACCAAGTTAGGCCCC............................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:4330715-4330965 + dvi_3871 CCAGA--TAATGAAATATGTGAACAGACGGCCGTTGAATAAGCTAATCAGCAAAAGAGGTCG------GCGGTTCAATTCGCGGGT-----------------------CAAACGATGGGCTTTGGCTTTGCTGCGACCTTACCTTATCACATTCTTTTCTATTTCAATTGAAAAGCCATTCCTTGTAA--TTATAATTA---------------------------ATTT-AATT-ATTATT---CTTATT---ATACTTTATGTTAGGGTCTCGCCTTTACACATGAGGAGCGCCAGGTGTTGGGCATTCATGGCCT
droMoj3 scaffold_6540:8688571-8688658 + ATCAA--TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATC-CTCTT---CGATCTT---CTCTATGTTTTCAGGGTCTGGCCTTCACACATGAGGAACGTCAGTTGTTGGGCATTCACGGTCT
droGri2 scaffold_14906:6902475-6902527 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGGTCTAGCCTTCACACACGACGAGCGTCAGGTGTTGGGCATCCATGGCCT
droWil2 scf2_1100000004902:5377367-5377483 + AAGGA--ATTATTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATTTGT------GATGGAATTTTAA-------------TTG--------A-----T--AAG---GATTGTGT--TTTATCTTTTGCAGGGCTTGGCCTTTACACTAGAAGAACGTCAGGTATTGGGCATTCATGGCTT
dp5 2:11655185-11655402 + CAAAC--TTTTCCACCATTTCAACGAGCGCCAGAGTGATAGCCAGAGCCTCAGAGCAGATCATTATGCACTAATTAATTGTCGGGTGATCTTTTCAAATTCGAATTCTGCAAATCATAGGGTT-----------------------------------------------GAG-AGACATCTTTTGC--TAG------------------------------------TTA-----T--AATG---TACATA---TTCATCTCCTTCAGGGCCTGGCTTTCACACACGAGGAACGCCAGCAGTTGGGCATCCATGGCCT
droPer2 scaffold_0:8858706-8858923 - CAAAC--TTTTCCACCATTTCAGCGAACGCCAGAGTGATAGCCAGAGCCTCAGAGCAGATCATTGTGCACTAATTAATTGTCGGGTGATCTTTTCAAATTCGAACTCTGCAAATCATAGGTTT-----------------------------------------------GAG-AGACAACTTTTGC--TAG------------------------------------TTA-----T--AATG---TACATA---TTCATCTCCTTCAGGGTCTGGCTTTCACACACGAGGAACGCCAGCAGTTGGGCATCCATGGCCT
droAna3 scaffold_13340:9609977-9610064 + TTCAA--CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTG-GTATT---AATATTA---TTGCCTCCTTCCAGGGTCTGGCCTTCACCCACCAGGAGCGCCAGCAATTGGGCATCCATGGACT
droBip1 scf7180000396567:169201-169321 - CATTG--CTTGGCAATAT---------------------------------------------AGTGAACCATTTAATT---------------------------------------------------------------------------------------------------------------------GGAATCCCCA-------------TTG-----AGTT-----T--ATTG---GTTATT---C---TTTTGATTAGGGCCTAGCTTTCACCATCGAAGAACGACAGCGGTTGGGCATCCTCGGACT
droKik1 scf7180000302699:223654-223766 - CGATC--GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACATTTTTTATAC--CTAATAATAATTTAC----------------------C-------T--AATA---TATATC---CTTCTGCCTTCTAGGGCCTGGCCTTTACGCATGAGGAACGTCAACAGCTGGGCATCCATGGCCT
droFic1 scf7180000453800:986793-986926 - TTATA--TT-C--TT--------------------------------------------------------------------------------------------------------------------------------------TGA------------------------TCATTCCCTTTTT--GTAAAAAC-------GCATTTCATTTTCTTCATAAAACTA-----A--ATTC---AATATC---TTTATCATTTCCAGGGTTTGGCTTTCACCCACGAGGAGCGCCAGCAGTTGGGCATCCATGGACT
droEle1 scf7180000491280:1026360-1026458 + AATGT--ATTC--AA--------------------------------------------------------------------------------------------------------------------------------------AGA------------------------------TTGC---CC----------------------------------------------GTATT---AATTATGTTTTCTTGCCTTTGCAGGGCCTGGCCTTCACCCTCGAGGAGCGCCAGACGCTGGGCATTCATGGACT
droRho1 scf7180000758339:114-250 - TATCC--TA-------------------------------------------------------------------------GG--------------------------------------------------------------------------------------------ATGTTCTTTTTTC--AAAAGATTTATTTATGTAATTTAAA---ATA-----GCTT-AAAT-AATGAATTCGACCTC---TTGATCAATTTTAGGGCCTGGCCTTCTCACACGAAGAGCGTCAACAGTTGGGCATCCATGGCAT
droBia1 scf7180000299102:1438988-1439070 + TTAAT--AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATT---TTCATATT-TTTATTCCTTTCAGGGCCTGGCTTTCACGCACGAGGAGCGCCAGCAGTTGGGCATCCATGGCCT
droTak1 scf7180000410579:288892-288991 - CTTTAACTTATCTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ACT-TAATC-ATACT---CATCCTG---TTTTCCTTTTCTAGGGCCTGGCCTTCACCCTGGAGGAGCGTCAGACTCTGGGCATCCATGGACT
droEug1 scf7180000409770:444382-444459 + AATTT--ACTAATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTT---C---ATTTTTCTAGGGCCTTGCCTTTACCCTCGAGGAGCGTCAGACTTTGGGCATCCATGGACT
dm3 chr3R:8540805-8540932 - CATGC--CATCCTAT-----------------------------------------------------------------------------------TACGAATC----------------------------------------------------------------CTACAGATATTAATAGTAG--GTATTGGTA---------------------------ACTA-----A--AATG---CATATC---CCTTTCAATTTCAGGGCCTGGCCTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCAT
droSim2 3r:12617746-12617859 + TTGAA--TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGATATTTTTAGTAG--GTATTAGTA---------------------------ACTA-----A--AATG---GATATC---CCTTTCGATTTCAGGGCCTGGCCTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCAT
droSec2 scaffold_0:13444480-13444593 + TTGAA--TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGATATTTTTAGTAG--GTATTAGCA---------------------------ACTA-----A--AATG---AATATC---CCTTTCGATTTCAGGGCCTGGCCTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCAT
droYak3 3R:12827755-12827814 - TTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCAGGGCCTGGCCTTCACTCACGAGGAGCGCCAGCAGTTGGGCATCCATGGCCT
droEre2 scaffold_4770:13107648-13107753 + ATTTA--T----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGTTATTGC---TAGTATTAGAT---------------------------ACT---------AATG---CATATT---CGTTTTGATTCTAGGGTCTGGCTTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CCAGA--TAATGAAATATGTGAACAGACGGCCGTTGAATAAGCTAATCAGCAAAAGAGGTCG------GCGGTTCAATTCGCGGGT-----------------------CAAACGATGGGCTTTGGCTTTGCTGCGACCTTACCTTATCACATTCTTTTCTATTTCAATTGAAAAGCCATTCCTTGTAA--TTATAATTA---------------------------ATTT-AATT-ATTATT---CTTATT---ATACTTTATGTTAGGGTCTCGCCTTTACACATGAGGAGCGCCAGGTGTTGGGCATTCATGGCCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTGGGC...........2316.006000200000200000000000000000000000000000000000000000000000001010
..............................................................................................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTGGGCA..........2313.003000000000000000000000000000000000000000000000000000000000000003
..............................................................................................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTG..............1912.002000000000001000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................CACATGAGGAGCGCCAGGTGTTGGGC...........2612.002000000000000000001100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGGTGTTGGG............1811.001000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GAGGAGCGCCAGGTGTTGGGC...........2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................AGCGCCAGGTGTTGGGCATTCAT.....2311.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTTGGGCA..........2511.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................GAGGAGCGCCAGGTGTTGG.............1911.001000000000001000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTTG..............2111.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTTTACACATGAGGAGCGCCAGGTGT................2611.001000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTGGGC...........2211.001000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGGTGTTGGGCA..........2111.001000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................CAGGTGTTGGGCATTCATGGC..2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGGTGTTGGGCATTCATGGC..2011.001000000000001000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GGTGTTGGGCATTCATGGCC.2011.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGT................1811.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTG..............2011.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTTGGGC...........2411.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GAGCGCCAGGTGTTGGGCATTCATGGC..2711.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CATGAGGAGCGCCAGGTGTT...............2011.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTT...............1811.001000000000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTGG.............2111.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CATGAGGAGCGCCAGGTG.................1811.001000000010000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CCAGGTGTTGGGCATTCATGGCC.2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTCTCGCCTTTACACATGAGGAGCGCCA.....................2811.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGAGGAGCGCCAGGTGTTGGGCATTC.......2611.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CACATGAGGAGCGCCAGGTGTT...............2211.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATGAGGAGCGCCAGGTGTTGGG............2211.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
ATCAA--TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATC-CTCTT---CGATCTT---CTCTATGTTTTCAGGGTCTGGCCTTCACACATGAGGAACGTCAGTTGTTGGGCATTCACGGTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................GGCCTTCACACATGAGGAACGTCAGTTG.................2811.001000001
..........................................................................................................................................................................................................................................................................................CACATGAGGAACGTCAGTTGTTGG.............2411.001000001
.................................................................................................................................................................................................................................................................................................GGAACGTCAGTTGTTGGGCATTCACGGT..2811.001100000
........................................................................................................................................................................................................................................................................................CACACATGAGGAACGTCAGTTGTTGGGC...........2811.001000001
..........................................................................................................................................................................................................................................................................................................GTTGTTGGGCATTCACGGTC.2011.001000001
droGri2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGGTCTAGCCTTCACACACGACGAGCGTCAGGTGTTGGGCATCCATGGCCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................TCAGGTGTTGGGCATCCA......1811.00110
............................................................................................................................................................................................................................................................................................CACGACGAGCGTCAGGTGTTGGG............2311.00101
..............................................................................................................................................................................................................................................................................................CGACGAGCGTCAGGTGTTGGGC...........2211.00101
..........................................................................................................................................................................................................................................................................................CACACGACGAGCGTCAGGTGTTG..............2311.00101
.......................................................................................................................................................................................................................................................................................................TCAGGTGTTGGGCATCCATG....2011.00110
..........................................................................................................................................................................................................................................................................................CACACGACGAGCGTCAGGTGTTGGGC...........2611.00101
...........................................................................................................................................................................................................................................................................................ACACGACGAGCGTCAGGT..................1811.00110
droWil2
AAGGA--ATTATTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATTTGT------GATGGAATTTTAA-------------TTG--------A-----T--AAG---GATTGTGT--TTTATCTTTTGCAGGGCTTGGCCTTTACACTAGAAGAACGTCAGGTATTGGGCATTCATGGCTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................AGAAGAACGTCAGGTATTGGGC...........2212.00220000
................................................................................................................................................................................................................................................................................................AAGAACGTCAGGTATTGGGCATTC.......2411.00110000
...........................................................................................................................................................................................................................................................................................ACTAGAAGAACGTCAGGTATTGGGCA..........2611.00100100
........................................................................................................................................................................................................................................................................................TACACTAGAAGAACGTCAGGT..................2111.00100100
......................................................................................................................................................................................................................................................................................TTTACACTAGAAGAACGTCA.....................2011.00100100
.................................................................................................................................................................................................................................................................................................AGAACGTCAGGTATTGGGCATT........2211.00100100
..................................................................................................................................................................................................................................................................................................GAACGTCAGGTATTGGGC...........1811.00110000
................................................................................................................................................................................................................................................................................................AAGAACGTCAGGTATTGGGC...........2011.00100001
dp5
CAAAC--TTTTCCACCATTTCAACGAGCGCCAGAGTGATAGCCAGAGCCTCAGAGCAGATCATTATGCACTAATTAATTGTCGGGTGATCTTTTCAAATTCGAATTCTGCAAATCATAGGGTT-----------------------------------------------GAG-AGACATCTTTTGC--TAG------------------------------------TTA-----T--AATG---TACATA---TTCATCTCCTTCAGGGCCTGGCTTTCACACACGAGGAACGCCAGCAGTTGGGCATCCATGGCCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................GAGGAACGCCAGCAGTTGGGC...........2112.0020110000000
........................................................................................................................................................................................................................................................................................CACACACGAGGAACGCCAGCAGTTGGGC...........2812.0020010100000
..................................................................................................................................................................................................................................................................................................GAACGCCAGCAGTTGGGCATCC.......2211.0010100000000
...............................................................................................................................................................................................................................................................................................GAGGAACGCCAGCAGTTGGGCATC........2411.0010000000100
........................................................................................................................................................................................................................................................................................CACACACGAGGAACGCCAGCAGTTGGG............2711.0010000100000
................................................................................................................................................................................................................................................................................................AGGAACGCCAGCAGTTGGGCATC........2311.0010000000010
...........................................................................................................................................................................................................................................................................................ACACGAGGAACGCCAGCAGTTGGG............2411.0010000001000
...................................................................................................................................................................................................................................................................................................AACGCCAGCAGTTGGGCATCCAT.....2311.0010100000000
.......................................................................................................................................................................................................................................................................................TCACACACGAGGAACGCCAGCAGTTGGGC...........2911.0010000000001
...........................................................................................................................................................................................................................................................................................ACACGAGGAACGCCAGCAGTTGGGC...........2511.0010000100000
..........................................................................................................................................................................................................................................................................................CACACGAGGAACGCCAGCAGTTGGGC...........2611.0010000000001
droPer2
CAAAC--TTTTCCACCATTTCAGCGAACGCCAGAGTGATAGCCAGAGCCTCAGAGCAGATCATTGTGCACTAATTAATTGTCGGGTGATCTTTTCAAATTCGAACTCTGCAAATCATAGGTTT-----------------------------------------------GAG-AGACAACTTTTGC--TAG------------------------------------TTA-----T--AATG---TACATA---TTCATCTCCTTCAGGGTCTGGCTTTCACACACGAGGAACGCCAGCAGTTGGGCATCCATGGCCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................CACACACGAGGAACGCCAGCAGTTGGGC...........2812.002002000
..................................................................GCACTAATTAATTGTCGGGTG........................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................GCCAGCAGTTGGGCATCCATGGCC.2411.001001000
..........................................................................................................................................................................................................................................................................................CACACGAGGAACGCCAGCAGTTGGG............2511.001001000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAACGCC......................1911.001010000
..................................................................................................................................................................................................................................................................................................GAACGCCAGCAGTTGGGC...........1811.001100000
.........................................................................................................................................................................................................................................................ATA---TTCATCTCCTTCAGGGTCTGGCT.........................................2611.001100000
droAna3
TTCAA--CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTG-GTATT---AATATTA---TTGCCTCCTTCCAGGGTCTGGCCTTCACCCACCAGGAGCGCCAGCAATTGGGCATCCATGGACTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................CTTCACCCACCAGGAGCGCCAGC...................2312.002110000
...........................................................................................................................................................................................................................................................................................CCACCAGGAGCGCCAGCAATTGGGC...........2511.001000010
.....................................................................................................................................................................................................................................................................................CTTCACCCACCAGGAGCGCC......................2011.001000010
...........................................................................................................................................................................................................................................................................................................CAATTGGGCATCCATGGACT2011.001100000
............................................................................................................................................................................................................................................................................................................AATTGGGCATCCATGGACT1911.001010000
.......................................................................................................................................................................................................................................................................................TCACCCACCAGGAGCGCCAGCA..................2211.001000001
.......................................................................................................................................................................................................................................................................................TCACCCACCAGGAGCGCCAGC...................2111.001000010
.............................................................................................................................................................................................................................................................................................................ATTGGGCATCCATGGACC1820.501010000
droBip1
CATTG--CTTGGCAATAT---------------------------------------------AGTGAACCATTTAATT---------------------------------------------------------------------------------------------------------------------GGAATCCCCA-------------TTG-----AGTT-----T--ATTG---GTTATT---C---TTTTGATTAGGGCCTAGCTTTCACCATCGAAGAACGACAGCGGTTGGGCATCCTCGGACTSizeHit CountTotal NormTotal
No Reads
droKik1
CGATC--GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACATTTTTTATAC--CTAATAATAATTTAC----------------------C-------T--AATA---TATATC---CTTCTGCCTTCTAGGGCCTGGCCTTTACGCATGAGGAACGTCAACAGCTGGGCATCCATGGCCTSizeHit CountTotal NormTotal
No Reads
droFic1
TTATA--TT-C--TT--------------------------------------------------------------------------------------------------------------------------------------TGA------------------------TCATTCCCTTTTT--GTAAAAAC-------GCATTTCATTTTCTTCATAAAACTA-----A--ATTC---AATATC---TTTATCATTTCCAGGGTTTGGCTTTCACCCACGAGGAGCGCCAGCAGTTGGGCATCCATGGACTSizeHit CountTotal NormTotal
No Reads
droEle1
AATGT--ATTC--AA--------------------------------------------------------------------------------------------------------------------------------------AGA------------------------------TTGC---CC----------------------------------------------GTATT---AATTATGTTTTCTTGCCTTTGCAGGGCCTGGCCTTCACCCTCGAGGAGCGCCAGACGCTGGGCATTCATGGACTSizeHit CountTotal NormTotal
No Reads
droRho1
TATCC--TA-------------------------------------------------------------------------GG--------------------------------------------------------------------------------------------ATGTTCTTTTTTC--AAAAGATTTATTTATGTAATTTAAA---ATA-----GCTT-AAAT-AATGAATTCGACCTC---TTGATCAATTTTAGGGCCTGGCCTTCTCACACGAAGAGCGTCAACAGTTGGGCATCCATGGCATSizeHit CountTotal NormTotal
No Reads
droBia1
TTAAT--AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATT---TTCATATT-TTTATTCCTTTCAGGGCCTGGCTTTCACGCACGAGGAGCGCCAGCAGTTGGGCATCCATGGCCTSizeHit CountTotal NormTotal
No Reads
droTak1
CTTTAACTTATCTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ACT-TAATC-ATACT---CATCCTG---TTTTCCTTTTCTAGGGCCTGGCCTTCACCCTGGAGGAGCGTCAGACTCTGGGCATCCATGGACTSizeHit CountTotal NormTotal
No Reads
droEug1
AATTT--ACTAATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTT---C---ATTTTTCTAGGGCCTTGCCTTTACCCTCGAGGAGCGTCAGACTTTGGGCATCCATGGACTSizeHit CountTotal NormTotal
No Reads
dm3
CATGC--CATCCTAT-----------------------------------------------------------------------------------TACGAATC----------------------------------------------------------------CTACAGATATTAATAGTAG--GTATTGGTA---------------------------ACTA-----A--AATG---CATATC---CCTTTCAATTTCAGGGCCTGGCCTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGGCA..........23113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000110000020000200000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000010000000
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGGCA..........2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000110000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGGCA..........2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGG............2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000001000000000100000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGGC...........2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000101000000
...............................................................................................................................................................................................................................................................................................GAGGAGCGCCAGCAGTTGGGCA..........2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTTCACACACGAGGAGCGCC......................2014.0040000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCACACACGAGGAGCGCCA.....................1913.0030000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGGCA..........2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000002
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGGCATCC.......2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGG.............2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGG............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GGGCCTGGCCTTCACACA.................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGGCAT.........2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAGCA..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGGC...........2212.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGGG............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTTCACACACGAGGAGCGCCA.....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCCTGGCCTTCACACACGAGGAGCGCC......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGGCA..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGG............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTTCACACACGAGGAGCGC.......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GAGCGCCAGCAGTTGGGCA..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCC......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCAGC...................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGGC...........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTG..............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCAGTTGGGCATCCATGGCA.2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTTCACACACGAGGAGCGCCAGCAGT................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................GCCTTCACACACGAGGAGCG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CACACGAGGAGCGCCAGCAGTTGGGC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................ACACACGAGGAGCGCCAGCAGTTGGGC...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................TGGCCTTCACACACGAGGAGCGCCAG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCAGCAGT................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGG.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................CTGGCCTTCACACACGAGGAGCGCC......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGCGCCAGCAGTTGGGCATCCA......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGG.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................CTTCACACACGAGGAGCGCCAGCAG.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TGGCCTTCACACACGAGGAGCGCCAGC...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................ACACACGAGGAGCGCCAGCAGTTGGG............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................GGCCTGGCCTTCACACACGAGGAGCGC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGGCATCCA......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTT...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GGCCTTCACACACGAGGAGC.........................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGG............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
..........................................................................................................................................................................................................................................................................................CACACGAGGAGCGCCAGCAGTTGGGCA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGCGCCAGCAGTTGGGCAT.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGG.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GAGGAGCGCCAGCAGTTGGGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................CTGGCCTTCACACACGAGGAGCG........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CCTTCACACACGAGGAGCGCCAG....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................CCTGGCCTTCACACACGAGGAGCGCC......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GAGGAGCGCCAGCAGTTGGGCATC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AGGGCCTGGCCTTCACACACGAGGAGCGC.......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCACACACGAGGAGCGCCAGCAGT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGGGG..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGT................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGGCATCCA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGGCATCC.......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GGCCTTCACACACGAGGAG..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GCAGTTGGGCATCCATGGCA.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAGCAGTTGGG............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAGCAGTTGGGC...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCA.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAG....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGGCATCCC......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CCTTCACACACGAGGAGCGCC......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GAGGAGCGCCAGCAGTTGGGCAT.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCAGTTGGGCATCCATG....1811.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGG.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGGCATC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................ACACACGAGGAGCGCCAGC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGGCATCCAT.....2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CCTTCACACACGAGGAGC.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TGGCCTTCACACACGAGGAGC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGGGC...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................ACACACGAGGAGCGCCAGCAGTTGGGCA..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGCGCCAGCAGTTGGGCA..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGGGCATC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCA..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGGCAA.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCAGTTGGGCATCCATGGC..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................TGGCCTTCACACACGAGGG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CCTTCACACACGAGGAGCGCCA.....................2211.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAGCAGTTGGGCA..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCCTGGCCTTCACACACGAGGAGCGC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................CCTGGCCTTCACACACGAGGAGCGC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................ACACACGAGGAGCGCCAGCAGTTGGGCAA.........2911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCACACACGAGGAGCGCCAGCAGTTGG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCGCCAGCAGTTGGGCATCCATGG...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGGC...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGGCAT.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCAGTTGGGCATCCATGGCAT2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGGGCACA........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGTTT..........2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droSim2
TTGAA--TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGATATTTTTAGTAG--GTATTAGTA---------------------------ACTA-----A--AATG---GATATC---CCTTTCGATTTCAGGGCCTGGCCTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................CACACGAGGAGCGCC......................1511.00100000001000000000
.........................................................................................................................................................................................................................................................................................................AGCAGTTGGGCATCCATGG...1911.00100000000000100000
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGGCAT.........2711.00100000000000100000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCA.....................2011.00100000000000100000
droSec2
TTGAA--TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGATATTTTTAGTAG--GTATTAGCA---------------------------ACTA-----A--AATG---AATATC---CCTTTCGATTTCAGGGCCTGGCCTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................AGGAGCGCCAGCAGTTGGGCA..........2113.0030120
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGGCA..........2611.0010001
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGGGCATCC.......2811.0010100
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGGC...........1911.0010010
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTG..............2211.0010010
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGGCA..........2311.0010010
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCAG....................2111.0010010
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGGC...........2211.0010100
..........................................................................................................................................................................................................................................................................................................GCAGTTGGGCATCCATGGC..1911.0010010
..............................................................................................................................................................................................................................................................................GCCTGGCCTTCACACACGAGGAGCGC.......................2611.0010100
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAGCA..................2111.0010100
droYak3
TTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCAGGGCCTGGCCTTCACTCACGAGGAGCGCCAGCAGTTGGGCATCCATGGCCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................CTCACGAGGAGCGCCAGCAGTTGGGCATCC.......30116.0016000000000016
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGGC...........1911.00100100000000
........................................................................................................................................................................................................................................................................................CACTCACGAGGAGCGCCAGCAGTTGGGC...........2811.00100000010000
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGGG............2311.00100000010000
..............................................................................................................................................................................................................................................................................GCCTGGCCTTCACTCACGAGGAGCGCC......................2711.00100000010000
......................................................................................................................................................................................................................................................................................TTCACTCACGAGGAGCGCCAGCAGTTGGG............2911.00100000010000
..............................................................................................................................................................................................................................................................................GCCTGGCCTTCACTCACGAGGAGCGC.......................2611.00100000010000
..........................................................................................................................................................................................................................................................................................CTCACGAGGAGCGCCAGCAGTTGGGC...........2611.00100000010000
.....................................................................................................................................................................................................................................................................................CTTCACTCACGAGGAGCGCCAG....................2211.00100000010000
droEre2
ATTTA--T----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGTTATTGC---TAGTATTAGAT---------------------------ACT---------AATG---CATATT---CGTTTTGATTCTAGGGTCTGGCTTTCACACACGAGGAGCGCCAGCAGTTGGGCATCCATGGCCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGGCA..........26117.001700000017
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAGCAGTTGGGC...........2813.0030001200
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGG............1813.0031000110
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGGC...........2513.0030100020
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGG............2412.0020000110
............................................................................................................................................................................................................................................................................................CACGAGGAGCGCCAGCAGTTGGGC...........2412.0020200000
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGGC...........1912.0020100010
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGGGCAT.........2511.0010000100
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGG............2111.0010000010
..............................................................................................................................................................................................................................................................................................CGAGGAGCGCCAGCAGTTGGGC...........2211.0010000100
...........................................................................................................................................................................................................................................................................................ACACGAGGAGCGCCAGCAGTTGGGCATC........2811.0010000001
................................................................................................................................................................................................................................................................................CTGGCTTTCACACACGAGGAG..........................2111.0010100000
....................................................................................................................................................................................................................................................................................................GCGCCAGCAGTTGGGCATCCATGGC..2511.0010100000
..................................................................................................................................................................................................................................................................................GGCTTTCACACACGAGGAGC.........................2011.0010001000
..............................................................................................................................................................................................................................................................................GTCTGGCTTTCACACACGAGGAGC.........................2411.0010000010
........................................................................................................................................................................................................................................................................................................CAGCAGTTGGGCATCCATGGCCC2311.0010100000
...................................................................................................................................................................................................................................................................................................AGCGCCAGCAGTTGGGCATCCA......2211.0011000000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCC......................1911.0010100000
.....................................................................................................................................................................................................................................................................................TTTCACACACGAGGAGCGCCAGCA..................2411.0010001000
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCAGCAGT................2511.0010000010
................................................................................................................................................................................................................................................................................CTGGCTTTCACACACGAGGAGCGCC......................2511.0010000100
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCAG....................2111.0010000100
.................................................................................................................................................................................................................................................................................................GGAGCGCCAGCAGTTGGGCATCC.......2311.0010000100
......................................................................................................................................................................................................................................................................................TTCACACACGAGGAGCGCCAGCAGTTGG.............2811.0010000100
........................................................................................................................................................................................................................................................................................CACACACGAGGAGCGCCAGCAGTTGGG............2711.0010000100
.........................................................................................................................................................................................................................................................................................................AGCAGTTGGGCATCCATGGC..2011.0010000100
.............................................................................................................................................................................................................................................................................................ACGAGGAGCGCCAGCAGTTGG.............2111.0010001000
...............................................................................................................................................................................................................................................................................................GAGGAGCGCCAGCAGTTGGG............2011.0010000100

Generated: 05/16/2015 at 11:47 PM