ID:

dvi_3683

 Coordinate:

scaffold_12855:3097072-3097222 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ10408-cds]; exon [dvir_GLEANR_10336:2]; intron [Dvir\GJ10408-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCAGCTGCTCTGACGCATGTCAATAGAAATAGCCAGCGCTATGCGAGTGGGATACTATATATAGCACGATGTCATTATATCATCGAATTGAGGGCAAATCAAGCGTGCCAGTGTCAGCAAATTTCCAACCATTTGCCAATTGGACAATGCTCTTTAACTGATTTGCCATTAACCTGTATTGTTTTCCCTATCCAATTGCAGTTGTCGCTTGCATTTGGGTTTCCGGCATTGGGATTACGGCGGGCGCCCAT
**************************************************................(((((.........)))))..((((.((((((((((((((((((((....((((((........))))))..))))).)).)))).......))))))))).)))).((((((((...........))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060678
9x140_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060682
9x140_0-2h_embryos_total
....................................................................................................................................................................................................................ATTTGGGTTTCCGGCATTGGGAC................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................GTATTGGTTTCCCTATCCAATTGCAG.................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................GTTGTCGCTTGCATTTGGGTT.............................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTCGCTTGCATTTGGGT............................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.........CTGACGCATGTCAATAGAAATAGCC......................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGTTGTCGCTTGCATTTGG................................. 19 1 2 0.50 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................ATTGGGATTACGGCTGGT...... 18 2 5 0.20 1 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................TTTCACCTATCCATTTGCAGT................................................. 21 3 5 0.20 1 0 0 0 0 0 0 1 0
..............................................................................................................................AACCTTTTGCCGATTGAACAA........................................................................................................ 21 3 7 0.14 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................GGTTGCATTTGCGTTTCTGGC........................ 21 3 13 0.08 1 0 0 0 0 0 0 0 1
.........................................................................................................................GTTCCAACCATTTCCCAAGT.............................................................................................................. 20 3 15 0.07 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

CGTCGACGAGACTGCGTACAGTTATCTTTATCGGTCGCGATACGCTCACCCTATGATATATATCGTGCTACAGTAATATAGTAGCTTAACTCCCGTTTAGTTCGCACGGTCACAGTCGTTTAAAGGTTGGTAAACGGTTAACCTGTTACGAGAAATTGACTAAACGGTAATTGGACATAACAAAAGGGATAGGTTAACGTCAACAGCGAACGTAAACCCAAAGGCCGTAACCCTAATGCCGCCCGCGGGTA
**************************************************................(((((.........)))))..((((.((((((((((((((((((((....((((((........))))))..))))).)).)))).......))))))))).)))).((((((((...........))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060684
140x9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 M027
male body
............................TAGCCGTCGCGATACGTTCA........................................................................................................................................................................................................... 20 3 8 0.13 1 1 0 0
.......................................................................................................GTACGGTCACAGTCGATGAA................................................................................................................................ 20 3 13 0.08 1 0 1 0
...................................CGAGGTAGGCTCACCCTA...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:3097022-3097272 - dvi_3683 GCAG---CTGC-----------------------------------------TCTGACGCATGTCAATA---GAAATAGCC-AG-CGCTATGCGA---------------------------GTGGGATAC----------------------------------------------------------------TATATATA--------GCACGAT---GTCATTATATCATCGAATT-------------GAGGGCAAATCAAGCGTGCC------AGTGTCAG--CAA-AT--TTCC-AACCATTT--GCCAA----------TTGGA-------------------------CAATG--------------------------------------------------------------------------------------C--------TCTTTA-ACTGA--TTTGCCATTAACCTGTAT-TGTT---TTCCC--T-AT-C-------CA-ATTGCAGTTGTCGCTTGCATTTGGGTTTCCGGCATTGGGATTACGGCGGGCGCCCAT
droMoj3 scaffold_6540:10099415-10099746 + GCTG---C--------------------------------------------TCTGACGCATGGCATTA---GAAATAGACAAAGAGCCAGGTGGG--------------------GAGGGAAG--GGTCTCCTCTCTAGTGTAGTGTCTCCCCTGCCCACATTAGCTCTCTGACTATTTCAATTGCCATGCGTTTATATATAGCATTATAGCACGGTGCCATTATTATATCATCGAATT-------------GCGAGCAAATCAAGCGTGAC------AGCATCCA--CAG-CA--AACAAAAGT-TTC--A--AA----------CAC--------------------------------------------------------------------------------------------------------------------TTT--------CCTCTG-CCCAC--TTTAACAATA---TTTCACTCTCTCTCT--CTCTCT-CTCTCTCTCAC-TCTGCAGTCGTTGGCTGCATTTGGGTATCGGGCATTGGCATTACGGCGGGTGCGCAT
droGri2 scaffold_14906:5799261-5799503 - ACAT--------------------------------TAGGCAACTCGGACGGACTGACGCATGCCAATA-----------------------------------------------GTAGAAATAGCTATA---------T----------------------------G--------------TACTATATATTTATAT-------------ATAT----GTTATTATGTCATCGGTTTCATCGAGCACTCAGCGCGCATATCAAGCGAGAC------AGCA---A--CA-----------AACAATTTTAGCCAAATCCCTACTATGGC--------------------------CAA-----------------------------------------------------------------------------------------------------------------AAGCA-------ATAACTGTT---TT--C--A----T-------TT-CTTGCAGTTGCCGCTAGCATTTTGGTTTCGGGCGTTGGGATTACGGCTGGTGCCCAT
droWil2 scf2_1100000004943:9485715-9485954 - GAAC---T------------AGGT---GACG--CATTAAA--------------------------CTACCAGAAAATGCC-AC-CTATATTTGTT--------------------T----------------------------------------------------TT--------------TTTATGTATGTATATATA--------GAATCT----AGTATTATGTCATGCAT----------------AGAGTAAATCAAGCAGCA------ACAAGTCAT--CAG-T-----CTGAG-----------------------------------------------------TAGCTATAA------------------GTACATAC-----AT------------------------------------------------------------------------AAATACAATGCTATTCAACTGTT---AT--TTTGAT-AT-------TTATTTCCAGTGGTGGTGACCATTTGGGTCTCGGGCATTGGCATCACGGCGGGAGCCCAT
dp5 2:1483152-1483409 + ------------------------------------TAGG---------------------------------------CC-AC-CCTGAAGAA----------------------CAGAGAATAGATATG----------------------------------------------------------------TATATTTA--------G-----------TATTGTGTCATGCGG----------------TGAGTAAATCAAGCGAGGC------CGAGTCAA--CAG------AGCGAACTATTC--A--GA----------GGCA--------------------------TGTGTATAT--GCTGTCTGCTATATATTTACATAC-----AT------A------------------TGGGACTATGTGGGTG-----------------TATGTG-----TTTATAGACAATGGCATTTCTCTATT---CT--CTTGAT-CC-------CT-CTTTCAGTGGTTGGTACCATCTGGGTATCAGGCATTGGGATCACGGCGGGTGCGCAT
droPer2 scaffold_7:4286002-4286255 + ------------------------------------TAGG---------------------------------------CC-AC-CCTGAAGAA----------------------CAGAGAATAGATATG----------------------------------------------------------------TATATTTA--------G-----------TATTGTGTCATGCGG----------------TGAGTAAATCAAGCGAGGC------CGAGTCAA--CAG------AGCGAACTATTC--A--GA----------GGCA--------------------------TGTGTATAT--GCTGTCTGCTATA----TACATAC-----AT------A------------------TGGGACTATGTGGGTG-----------------TATGTG-----TTTATAGACAATGGCATTTCTCTATT---CT--CTTGAT-CC-------CT-CTTTCAGTGGTTGGTACCATCTGGGTATCAGGCATTGGGATCACGGCGGGTGCGCAT
droAna3 scaffold_13340:21058143-21058410 - CAGA----TTTTCGAATGCGAGGTGGCGTCAAAAAATAGG---------------------------------------CC-AC-CCCAAAGTGAG--------------------CAGAGAAT--GTAGA----------------------------------------------------------------TATATTTA--------GTACCGA---AGCGTTGT---ATCTGG----------------CGACCAATTCAAGCGAG-------AAGCGTCAC--CAG------AGCAAGCTGTTC--A--GA----------TGGG--------------------------CGGGTATATGTGTTG----------------------------------------ATTGTGTA--------------------------TAT--------AGTTTGGATTGT--TTATACAATGACAACTGACTGTT---CT--T--G-TT-T-------AT-ATTCTAGTGGTCGTCACCGTATGGGTCTCGGGTATCGGAATCACGGCGGGAGCCCAC
droBip1 scf7180000396413:1385548-1385804 + TGAG---A-------------GGTGGCGACAAAAAATAGG---------------------------------------CC-AC-CCCAAAGAA----------------------GGGGGAATT--TAGA----------------------------------------------------------------TATATTTA--------GTACCGG---AGCATTGTATCATATGG----------------CGACCAATTCAAGCGAG-------AAGCGTCAC--CAG------ACAAAGCTGTTC--A--GA----------TGGG--------------------------CGTGTATATCTGTTG----------------------------------------ATTGTATAT--------------------------AT--------AGTTTGGATTGT--TTATACAACGACAACTGACTGTT---CT--T--G-TT-T-------AT-ATTTCAGTGGTCGTCACCGTATGGGTCTCGGGTATCGGAATCACGGCGGGAGCCCAC
droKik1 scf7180000302261:482462-482751 - G------------------------------------------------------------------------------CC-AC-CTCGAAGAAACGGAGAGCGGAGAGCACAGAACTGGGAATAGATAGA----------------------------------------------------------------TATATTTA--------GAGCCC----GGCGTTGTGTCATCCGC----------------TGAGCAAATCAAGCGAG-------AAGCGTCAC--CAG-T-----GCCAACTATTT--G--AA----------TGGCCATATATATAAAAGCGTTCAGATGTATGTGAATAT------------------------AC-----AT--------------------AT------------------G--TATGTTTGGGATTGTTGTTTG-TTTGT--TTAGACAATGACAACTGACTGTT---GG--CTGTTT-TT-------TT-CTATCAGTTGTGGTCACCGTTTGGGTCTCCGGAATCGGCATTACGGCAGGAGCCCAT
droFic1 scf7180000454106:444391-444621 + -----------------------------------ATAGG---------------------------------------CC-AC-CCCGAAGAA----------------------CGGGCAATAGATAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGC----------------TGAGCAAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CACCAAACTATTC--C--GA----------TGGG--------------------------CGGGTATAT-----------------------------------GTAT-------ACCGT-----------------------------TTT--------TGTTTGTTTTGT--TTATACAATGACATCCGCTTGTT---CT-------------------T-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGAATCGGAATCACGGCGGGAGCCCAC
droEle1 scf7180000491280:2321228-2321467 - GCAG---ATATCCGA-------GTGGCGACA--AAATAGG---------------------------------------CC-AC-CTCGAAGAA----------------------CGGGGAATAGATAGA----------------------------------------------------------------TCTATTTA--------GAGCCG----GGCGTTGTGTCATCCGTTG-------------GGCAGCAAATCAAGCGAG-------AAGCGTTAC--CAG------------------------A----------TGGG--------------------------CGGGTATAT-------------------------------------AT-------ATAGTATAT-------------------------------------GCTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CT--T-------T-------TT-TTCCCAGTGGTGGTCACCGTTTGGGTCTCTGGAATCGGCATCACGGCGGGAGCCCAC
droRho1 scf7180000778218:13600-13865 + GGGACCGATTTCCGA-------GTGGCGACA--AAATAGG---------------------------------------CC-AC-CCCGAAGAA----------------------CGGGGAATAGATAGA----------------------------------------------------------------TATATTTA--------GAGTCG----GGCGTTGTGTCATCCGT----------------TGAGCAAATCAAGCGAG-------AAGCGTCACCGCAG-CA--CACCAAACTATTC--A--GA----------TGGGG-------------------------CGGGTATCT------------------------AC-----ATATGTAT-------ATAGTATAT-------------------------------------GTTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CT--T----------------T-TTTCCAGTGGTGGTCACCGTTTGGGTCTCCGGAATTGGCATTACGGCGGGAGCCCAT
droBia1 scf7180000302113:1356393-1356645 + G--------------------------------AAATAGG---------------------------------------CC-AC-CCCGAAGAAA---------------------GGGGGAATATGTAGA----------------------------------------------------------------TATATTTA--------GAGTCC----AGAGTTGTGTCATCCGC----------------TGAGCAAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CACCAAACTATTC--A--GA----------TGGGT-------------------------CGGGCAAAT---------------------------------------GTGGTACATAGTATAT------------------G--TATGCTC--------TGTTTG-TTTGT--TTGGACAATGACAAGCGTCTGTT---CC--C--C-GC-T-------TT-TTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGAATCGGCATCACGGCGGGAGCCCAT
droTak1 scf7180000415765:465593-465817 - -----------------------------------ATAGG---------------------------------------CC-AC-CCCAAAGAAAT--------------------AGGGGAATATGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------TGAGCAAATCA----------------------------------CCGAACTATTC--A--GA----------TGGTT-----------------CGG-----CTGGTATAT----------------------------------------------ATAGTATAT------------------G--TATGTTT--------TGTTTG-TTTGT--TTAGACAATGACAACCGTCTGTT---CT--T--A-AT-G-------CT-TTTTCAGTGGTGATCACCGTTTGGGTCTCTGGCATCGGAATCACGGCGGGAGCACAT
droEug1 scf7180000409555:511126-511370 - G------------------------------------------------------------------------------CC-AC-CCCGAAGAACG--------------------GGGGGAATAGATAGA------------------------------------------------------------TATGTATATTTA--------GAGCCC----GGTGTTGTGTCATCCGT----------------TGAGCAAATCAAGCGAG-------AAACGTCAC--CAG-CCATCATGAAACTATTT--A--GA----------TGGGT-----------------CG-------GGGTATAT-----------------------------------ATAT-------ATAGTATAT------------------G--TATGTTT--------TGTTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CT-------------------T-CTTTCAGTGGTGGTCACCGTTTGGGTCTCAGGAATTGGAATAACGGCGGGAGCACAT
dm3 chr3R:26023354-26023619 - GCAA----------------------CGACA--AAATAGG---------------------------------------CC-AC-CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------CGAGCGAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CCCCAAACAGTTC--A--GA----------CGAG--------------------------CGGGAATAT------------------------AC-----ATACATATATGGTAC-------ATATATGG---CATGTGTGTGCATGTGTTT--------TATTTG-TTTGT--TTGGACAATGACATCCGACTGTT---CG--C-------T-------CC-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCACGGCGGGAGCCCAT
droSim2 3r:25368939-25369200 - dsi_30467 GCAA----------------------CGACA--AAA--------------------------------------AAAGGCC-AC-CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCTGT----------------CGAGCGAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CCCCAAACAGTTC--C--GA----------CGG---------------------------CGGGAATAT------------------------AT-----GTACATATATGGTAC-------ATATATGG---CATGTGT--G--TGTGTTT--------TATTTC-TTTGT--TTAGACAATGACATCCGACTGTT---CG--C-------T-------CC-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCACGGCGGGAGCCCAT
droSec2 scaffold_4:4875832-4876097 - GCAA----------------------CGACA--AAATAGG---------------------------------------CC-AC-CCCGA--------------------------------ATTTGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------CGAGCGAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CCCCAAACAGTCC--C--GA----------CGG---------------------------CGGGAATAT------------------------ACTATATGTACATATATGGTAC-------ATATATGG---CATGTGT--G--TGTGTTT--------TATTTG-TTTGT--TTAGACAATGACATCCGACTGTT---CG--C-------T-------CC-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCACGGCTGGAGCCCAT
droYak3 3R:26957106-26957314 - CCAA---------------------------------------------------------------------------------CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTTTGTCATCCGT----------------CGAGCAAATCAAGCGAGTCAAGAGAAGCGTCAT--CA-----------AACAACTC--GC----------------------------------------------------------------------------------------------------TGT----------------GTGT--G--TGTGTTT--------TATTTG-TTTGT--TTAGACAATGACATCCGTTTGTT---CG--T--C-CC-C-------CC-TTTTCAGTGGTGGTCACCGTCTGGGTCTCCGGCATCGGCATCACGGCGGGAGCCCAT
droEre2 scaffold_4820:1974499-1974720 + GCAA----------------------CGACA--AAATAGG---------------------------------------CC-AC-CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------CGACCAAACCGAGCGAG-------AAGCGTCAC--CAGACA--CGCCAAAGAACTC--GC----------------------------------------------------------------------------------------------------------------------TGTGT--G--TGCGTTT--------TATTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CG--T-------C-------CC-CTTTCAGTGGTGGTCACCGTGTGGGTCTCCGGGATCGGCATCACGGCGGGAGCCCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCAG---CTGC-----------------------------------------TCTGACGCATGTCAATA---GAAATAGCC-AG-CGCTATGCGA---------------------------GTGGGATAC----------------------------------------------------------------TATATATA--------GCACGAT---GTCATTATATCATCGAATT-------------GAGGGCAAATCAAGCGTGCC------AGTGTCAG--CAA-AT--TTCC-AACCATTT--GCCAA----------TTGGA-------------------------CAATG--------------------------------------------------------------------------------------C--------TCTTTA-ACTGA--TTTGCCATTAACCTGTAT-TGTT---TTCCC--T-AT-C-------CA-ATTGCAGTTGTCGCTTGCATTTGGGTTTCCGGCATTGGGATTACGGCGGGCGCCCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGGTTTCCGGCATTGGGAC................2311.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCGCTTGCATTTGGGTT..............................2111.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGCTTGCATTTGGGT...............................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................CTGACGCATGTCAATA---GAAATAGCC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCTG---C--------------------------------------------TCTGACGCATGGCATTA---GAAATAGACAAAGAGCCAGGTGGG--------------------GAGGGAAG--GGTCTCCTCTCTAGTGTAGTGTCTCCCCTGCCCACATTAGCTCTCTGACTATTTCAATTGCCATGCGTTTATATATAGCATTATAGCACGGTGCCATTATTATATCATCGAATT-------------GCGAGCAAATCAAGCGTGAC------AGCATCCA--CAG-CA--AACAAAAGT-TTC--A--AA----------CAC--------------------------------------------------------------------------------------------------------------------TTT--------CCTCTG-CCCAC--TTTAACAATA---TTTCACTCTCTCTCT--CTCTCT-CTCTCTCTCAC-TCTGCAGTCGTTGGCTGCATTTGGGTATCGGGCATTGGCATTACGGCGGGTGCGCATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTGGGTATCGGGCATTGGCA.................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCGGGCATTGGCATTACGGC..........2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCTGCATTTGGGTATCG...........................2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCATTTGGGTATCG...........................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTATCGGGCATTGGCAT................1911.001000001
droGri2
ACAT--------------------------------TAGGCAACTCGGACGGACTGACGCATGCCAATA-----------------------------------------------GTAGAAATAGCTATA---------T----------------------------G--------------TACTATATATTTATAT-------------ATAT----GTTATTATGTCATCGGTTTCATCGAGCACTCAGCGCGCATATCAAGCGAGAC------AGCA---A--CA-----------AACAATTTTAGCCAAATCCCTACTATGGC--------------------------CAA-----------------------------------------------------------------------------------------------------------------AAGCA-------ATAACTGTT---TT--C--A----T-------TT-CTTGCAGTTGCCGCTAGCATTTTGGTTTCGGGCGTTGGGATTACGGCTGGTGCCCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GAAC---T------------AGGT---GACG--CATTAAA--------------------------CTACCAGAAAATGCC-AC-CTATATTTGTT--------------------T----------------------------------------------------TT--------------TTTATGTATGTATATATA--------GAATCT----AGTATTATGTCATGCAT----------------AGAGTAAATCAAGCAGCA------ACAAGTCAT--CAG-T-----CTGAG-----------------------------------------------------TAGCTATAA------------------GTACATAC-----AT------------------------------------------------------------------------AAATACAATGCTATTCAACTGTT---AT--TTTGAT-AT-------TTATTTCCAGTGGTGGTGACCATTTGGGTCTCGGGCATTGGCATCACGGCGGGAGCCCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATCACGGCGGGAGCC...2114.00401210
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATCACGGCGGGAGCCC..2213.00300210
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCACGGCGGGAGCC...1813.00301200
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGGGTCTCGGGCATT.....................1912.00220000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATCACGGCGGGAGCC...1912.00200200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATCACGGCGGGAGCCC..2011.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATCACGGCGGGAGCCCAT2411.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGGCATTGGCATCACGGCGGGA......2511.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGGTCTCGGGCATTGGCATCAC.............2611.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTCTCGGGCATTGG...................1911.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGGCATTGGCATCACGGCGG........2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATTTGGGTCTCGGGCATTG....................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGACCATTTGGGT...............................1811.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGGGTCTCGGGCAT......................1811.00101000
...............................................................................................................................................................................................................................................................GAGTAAATCAAGCAGCA------ACAAG......................................................................................................................................................................................................................................................................................................2211.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATCACGGCGGGA......1811.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCACGGCGGGAGCCC..1911.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATCACGGCGGGAGC....2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTTGGGTCTCGGGCATT.....................2011.00110000
dp5
------------------------------------TAGG---------------------------------------CC-AC-CCTGAAGAA----------------------CAGAGAATAGATATG----------------------------------------------------------------TATATTTA--------G-----------TATTGTGTCATGCGG----------------TGAGTAAATCAAGCGAGGC------CGAGTCAA--CAG------AGCGAACTATTC--A--GA----------GGCA--------------------------TGTGTATAT--GCTGTCTGCTATATATTTACATAC-----AT------A------------------TGGGACTATGTGGGTG-----------------TATGTG-----TTTATAGACAATGGCATTTCTCTATT---CT--CTTGAT-CC-------CT-CTTTCAGTGGTTGGTACCATCTGGGTATCAGGCATTGGGATCACGGCGGGTGCGCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGGATCACGGCGGGTG.....2012.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGTATCAGGCATTGGGATC...............2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCATTGGGATCACGGCGGGT......2411.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGCATTGGGATCACGGCGGGTG.....2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGGTATCAGGCATTGGG..................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGATCACGGCGGGTGCGC..2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGGTATCAGGCATTGG...................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCAGGCATTGGGAT................1811.0010000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGGTATCAGGCATTGGGA.................2311.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCATCTGGGTATCAGGCA.......................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCTGGGTATCAGGCATTGG...................2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTACCATCTGGGTATC............................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGATCACGGCGGGT......1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGGTACCATCTGGGTATCAGGC........................2711.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGATCACGGCGGGTGC....2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCTGGGTATCAGGCATTGG...................2311.0010100000000
.......................................................................................................................................................................................................................................................................CAAGCGAGGC------CGAGTCAA--CA..............................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGCATTGGGATCACG............1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................A--------------------------TGTGTATAT--GCTGTCTGCTATA....................................................................................................................................................................................................2311.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGGCATTGGGATCACGGC..........2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGTACCATCTGGGT...............................1811.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGGTATCAGGCATTGG...................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGGTACCATCTGGG................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACCATCTGGGTATCAGGCATTGG...................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCTGGGTATCAGGCA.......................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGGTATCAGGCATTGGGATCAC.............2711.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATT---CT--CTTGAT-CC-------CT-CTTTCAG..................................................2511.0010100000000
....................................................................................................................................................................................................ATATTTA--------G-----------TATTGTGTCATG......................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................ATTC--A--GA----------GGCA--------------------------TGTGTATAT--GC...............................................................................................................................................................................................................2211.0010000100000
droPer2
------------------------------------TAGG---------------------------------------CC-AC-CCTGAAGAA----------------------CAGAGAATAGATATG----------------------------------------------------------------TATATTTA--------G-----------TATTGTGTCATGCGG----------------TGAGTAAATCAAGCGAGGC------CGAGTCAA--CAG------AGCGAACTATTC--A--GA----------GGCA--------------------------TGTGTATAT--GCTGTCTGCTATA----TACATAC-----AT------A------------------TGGGACTATGTGGGTG-----------------TATGTG-----TTTATAGACAATGGCATTTCTCTATT---CT--CTTGAT-CC-------CT-CTTTCAGTGGTTGGTACCATCTGGGTATCAGGCATTGGGATCACGGCGGGTGCGCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCATCTGGGTATCAGGC........................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGGTACCATCTGGGT...............................2011.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGTG-----------------TATGTG-----TTTATAGAC....................................................................................................2211.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGTACCATCTGGGT...............................1811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCATCTGGGTATCAGGCATTGG...................2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCATCTGGGTATCAGGCATTGGG..................2611.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGATCACGGCGGGTGC....2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGGTATCAGGCATTGGGATCA..............2611.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGGGATCACGGCGGGT......2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGGTATCAGGCATTGGG..................2211.001001000
droAna3
CAGA----TTTTCGAATGCGAGGTGGCGTCAAAAAATAGG---------------------------------------CC-AC-CCCAAAGTGAG--------------------CAGAGAAT--GTAGA----------------------------------------------------------------TATATTTA--------GTACCGA---AGCGTTGT---ATCTGG----------------CGACCAATTCAAGCGAG-------AAGCGTCAC--CAG------AGCAAGCTGTTC--A--GA----------TGGG--------------------------CGGGTATATGTGTTG----------------------------------------ATTGTGTA--------------------------TAT--------AGTTTGGATTGT--TTATACAATGACAACTGACTGTT---CT--T--G-TT-T-------AT-ATTCTAGTGGTCGTCACCGTATGGGTCTCGGGTATCGGAATCACGGCGGGAGCCCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................GG--------------------------CGGGTATATGTGTTG----------------------------------------ATTGTGT..............................................................................................................................................................2411.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACCGTATGGGTCTCGGGTATCGG...................2611.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGTATGGGTCTCGGGTATCGGA..................2511.001000001
............................................................................................................................................................................................................................................................................................................CAAGCTGTTC--A--GA----------TGGG--------------------------C...........................................................................................................................................................................................................................1811.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGAATCACGGCGGGAGCCC..2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCGGAATCACGGCGGGA......2011.001010000
droBip1
TGAG---A-------------GGTGGCGACAAAAAATAGG---------------------------------------CC-AC-CCCAAAGAA----------------------GGGGGAATT--TAGA----------------------------------------------------------------TATATTTA--------GTACCGG---AGCATTGTATCATATGG----------------CGACCAATTCAAGCGAG-------AAGCGTCAC--CAG------ACAAAGCTGTTC--A--GA----------TGGG--------------------------CGTGTATATCTGTTG----------------------------------------ATTGTATAT--------------------------AT--------AGTTTGGATTGT--TTATACAACGACAACTGACTGTT---CT--T--G-TT-T-------AT-ATTTCAGTGGTCGTCACCGTATGGGTCTCGGGTATCGGAATCACGGCGGGAGCCCACSizeHit CountTotal NormTotal
No Reads
droKik1
G------------------------------------------------------------------------------CC-AC-CTCGAAGAAACGGAGAGCGGAGAGCACAGAACTGGGAATAGATAGA----------------------------------------------------------------TATATTTA--------GAGCCC----GGCGTTGTGTCATCCGC----------------TGAGCAAATCAAGCGAG-------AAGCGTCAC--CAG-T-----GCCAACTATTT--G--AA----------TGGCCATATATATAAAAGCGTTCAGATGTATGTGAATAT------------------------AC-----AT--------------------AT------------------G--TATGTTTGGGATTGTTGTTTG-TTTGT--TTAGACAATGACAACTGACTGTT---GG--CTGTTT-TT-------TT-CTATCAGTTGTGGTCACCGTTTGGGTCTCCGGAATCGGCATTACGGCAGGAGCCCATSizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------------------ATAGG---------------------------------------CC-AC-CCCGAAGAA----------------------CGGGCAATAGATAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGC----------------TGAGCAAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CACCAAACTATTC--C--GA----------TGGG--------------------------CGGGTATAT-----------------------------------GTAT-------ACCGT-----------------------------TTT--------TGTTTGTTTTGT--TTATACAATGACATCCGCTTGTT---CT-------------------T-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGAATCGGAATCACGGCGGGAGCCCACSizeHit CountTotal NormTotal
No Reads
droEle1
GCAG---ATATCCGA-------GTGGCGACA--AAATAGG---------------------------------------CC-AC-CTCGAAGAA----------------------CGGGGAATAGATAGA----------------------------------------------------------------TCTATTTA--------GAGCCG----GGCGTTGTGTCATCCGTTG-------------GGCAGCAAATCAAGCGAG-------AAGCGTTAC--CAG------------------------A----------TGGG--------------------------CGGGTATAT-------------------------------------AT-------ATAGTATAT-------------------------------------GCTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CT--T-------T-------TT-TTCCCAGTGGTGGTCACCGTTTGGGTCTCTGGAATCGGCATCACGGCGGGAGCCCACSizeHit CountTotal NormTotal
No Reads
droRho1
GGGACCGATTTCCGA-------GTGGCGACA--AAATAGG---------------------------------------CC-AC-CCCGAAGAA----------------------CGGGGAATAGATAGA----------------------------------------------------------------TATATTTA--------GAGTCG----GGCGTTGTGTCATCCGT----------------TGAGCAAATCAAGCGAG-------AAGCGTCACCGCAG-CA--CACCAAACTATTC--A--GA----------TGGGG-------------------------CGGGTATCT------------------------AC-----ATATGTAT-------ATAGTATAT-------------------------------------GTTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CT--T----------------T-TTTCCAGTGGTGGTCACCGTTTGGGTCTCCGGAATTGGCATTACGGCGGGAGCCCATSizeHit CountTotal NormTotal
No Reads
droBia1
G--------------------------------AAATAGG---------------------------------------CC-AC-CCCGAAGAAA---------------------GGGGGAATATGTAGA----------------------------------------------------------------TATATTTA--------GAGTCC----AGAGTTGTGTCATCCGC----------------TGAGCAAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CACCAAACTATTC--A--GA----------TGGGT-------------------------CGGGCAAAT---------------------------------------GTGGTACATAGTATAT------------------G--TATGCTC--------TGTTTG-TTTGT--TTGGACAATGACAAGCGTCTGTT---CC--C--C-GC-T-------TT-TTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGAATCGGCATCACGGCGGGAGCCCATSizeHit CountTotal NormTotal
No Reads
droTak1
-----------------------------------ATAGG---------------------------------------CC-AC-CCCAAAGAAAT--------------------AGGGGAATATGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------TGAGCAAATCA----------------------------------CCGAACTATTC--A--GA----------TGGTT-----------------CGG-----CTGGTATAT----------------------------------------------ATAGTATAT------------------G--TATGTTT--------TGTTTG-TTTGT--TTAGACAATGACAACCGTCTGTT---CT--T--A-AT-G-------CT-TTTTCAGTGGTGATCACCGTTTGGGTCTCTGGCATCGGAATCACGGCGGGAGCACATSizeHit CountTotal NormTotal
No Reads
droEug1
G------------------------------------------------------------------------------CC-AC-CCCGAAGAACG--------------------GGGGGAATAGATAGA------------------------------------------------------------TATGTATATTTA--------GAGCCC----GGTGTTGTGTCATCCGT----------------TGAGCAAATCAAGCGAG-------AAACGTCAC--CAG-CCATCATGAAACTATTT--A--GA----------TGGGT-----------------CG-------GGGTATAT-----------------------------------ATAT-------ATAGTATAT------------------G--TATGTTT--------TGTTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CT-------------------T-CTTTCAGTGGTGGTCACCGTTTGGGTCTCAGGAATTGGAATAACGGCGGGAGCACATSizeHit CountTotal NormTotal
No Reads
dm3
GCAA----------------------CGACA--AAATAGG---------------------------------------CC-AC-CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------CGAGCGAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CCCCAAACAGTTC--A--GA----------CGAG--------------------------CGGGAATAT------------------------AC-----ATACATATATGGTAC-------ATATATGG---CATGTGTGTGCATGTGTTT--------TATTTG-TTTGT--TTGGACAATGACATCCGACTGTT---CG--C-------T-------CC-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCACGGCGGGAGCCCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................AAACAGTTC--A--GA----------CGAG--------------------------CGGGA.......................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010
................................................................................................................................................................................................................................GTTGTGTCATCCGT----------------CGAGCGA............................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CCCCAAACAGTTC--A--GA----------CGAG--------------------------C...........................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTCTCCGGCATCGG...................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCGGCATCACGGCGGGAGCC...2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGGTCTCCGGCATCGGC..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................TCATCCGT----------------CGAGCGAATCAAG......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGGCATCGGCATCACGGC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCCGGCATCGGCATCACGGCGGGG......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..AA----------------------CGACA--AAATAGG---------------------------------------CC-AC-CCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................CGAGCGAATCAAGCGAG-------A..........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGCATCACGGCGGGA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--C-------T-------CC-CTTTCAGTGGTGG............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGTTTGGGTCTCCGGC........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCGGCATCACGGCGGG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGACTGTT---CG--C-------T-------CC-CTTTCA...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................GTTGTGTCATCCGT----------------CGAGCGAATCA........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................TAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGC.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................AAACAGTTC--A--GA----------CGAG--------------------------CGGG........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................A--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAG...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................AGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCG................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CGT----------------CGAGCGAATCAAGCGAG-------A..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................A----------CGAG--------------------------CGGGAATAT------------------------AC-----ATACA...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGGGTCTCCGGCATCGGCAT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCACGGCGGGAGCC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................GTTC--A--GA----------CGAG--------------------------CGGGAAT.....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACCGTTTGGGTCTCCGGCATCG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACCGTTTGGGTCTCCGGCATCG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................GAGCGAATCAAGCGAG-------AA.........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTCTCCGGCATCGGCA.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGGGTCTCCGGCATCGGCA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TATATGGTAC-------ATATATGG---CATGTGTGT..........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AGCGTCAC--CAG-CA--CCCCA...................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ACAGTTC--A--GA----------CGAG--------------------------CGGGAA......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTCTCCGGCATCGGCA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GAATCAAGCGAG-------AAGCGTCAC--................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACCGTTTGGGTCTCC...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTTGGGTCTCCGGCATC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................CCAAACAGTTC--A--GA----------CGAG--------------------------CGG.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
droSim2
GCAA----------------------CGACA--AAA--------------------------------------AAAGGCC-AC-CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCTGT----------------CGAGCGAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CCCCAAACAGTTC--C--GA----------CGG---------------------------CGGGAATAT------------------------AT-----GTACATATATGGTAC-------ATATATGG---CATGTGT--G--TGTGTTT--------TATTTC-TTTGT--TTAGACAATGACATCCGACTGTT---CG--C-------T-------CC-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCACGGCGGGAGCCCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCATCGGCATCACGGCGGGA......2311.00100010000000000000
...........................GACA--AAA--------------------------------------AAAGGCC-AC-CCCGA--------------------------------ATTCGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGCATCACGGCGGGAGCC...2111.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGTTTGGGTCTCCGGC........................1911.00101000000000000000
.................................................................................................................................GA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCG................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACCGTTTGGGTCTCCGGCATCGGC..................2811.00101000000000000000
........................................................................................GA--------------------------------ATTCGTAGA----------------------------------------------------------------TATT..........................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000010000000
droSec2
GCAA----------------------CGACA--AAATAGG---------------------------------------CC-AC-CCCGA--------------------------------ATTTGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------CGAGCGAATCAAGCGAG-------AAGCGTCAC--CAG-CA--CCCCAAACAGTCC--C--GA----------CGG---------------------------CGGGAATAT------------------------ACTATATGTACATATATGGTAC-------ATATATGG---CATGTGT--G--TGTGTTT--------TATTTG-TTTGT--TTAGACAATGACATCCGACTGTT---CG--C-------T-------CC-CTTTCAGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCACGGCTGGAGCCCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTCACCGTTTGGGTCTCCGGC........................2711.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGCATCACGGCTGGAGCCC..2211.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTCTCCGGCATCGGC..................2011.0010010
.......................................................................................................................................................................................................................................CATCCGT----------------CGAGCGAATCAAGCGAG-------A..........................................................................................................................................................................................................................................................................................................2511.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGCATCACGGCTGGAGCC...2111.0010010
droYak3
CCAA---------------------------------------------------------------------------------CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTTTGTCATCCGT----------------CGAGCAAATCAAGCGAGTCAAGAGAAGCGTCAT--CA-----------AACAACTC--GC----------------------------------------------------------------------------------------------------TGT----------------GTGT--G--TGTGTTT--------TATTTG-TTTGT--TTAGACAATGACATCCGTTTGTT---CG--T--C-CC-C-------CC-TTTTCAGTGGTGGTCACCGTCTGGGTCTCCGGCATCGGCATCACGGCGGGAGCCCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGCATCACGGCGGGAGCCC..2211.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGACATCCGTTTGTT---CG--T--C-C......................................................................2511.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGTCTGGGTCTCCGGC........................1911.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGGCATCGGCATCACGGC..........2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCACCGTCTGGGTCTCCGGC........................2311.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACCGTCTGGGTCTCCGGC........................2111.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGTCTCCGGCATCGGCATCAC.............2411.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTCACCGTCTGGGTCTCCGG.........................2411.00101000000000
droEre2
GCAA----------------------CGACA--AAATAGG---------------------------------------CC-AC-CCCGA--------------------------------ATTCGTAGA----------------------------------------------------------------TATATTTA--------GAGCCG----GGCGTTGTGTCATCCGT----------------CGACCAAACCGAGCGAG-------AAGCGTCAC--CAGACA--CGCCAAAGAACTC--GC----------------------------------------------------------------------------------------------------------------------TGTGT--G--TGCGTTT--------TATTTG-TTTGT--TTAGACAATGACATCCGTCTGTT---CG--T-------C-------CC-CTTTCAGTGGTGGTCACCGTGTGGGTCTCCGGGATCGGCATCACGGCGGGAGCCCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACCGTGTGGGTCTCCGGGA.......................2211.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCACGGCGGGAGCCC..1811.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCACGGCGGGAGCCC..1911.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTGTGGGTCTCCGGGATCG....................2211.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACCGTGTGGGTCTCCGGGATCGGC..................2711.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCCGGGATCGGCATCACGG...........2211.0010000100

Generated: 05/16/2015 at 08:19 PM