ID:

dvi_3593

 Coordinate:

scaffold_12855:2623526-2623676 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -14.1 -14.0

Flybase annnotation

CDS [Dvir\GJ10450-cds]; exon [dvir_GLEANR_10375:2]; intron [Dvir\GJ10450-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGTTAGAAAGAGTATTTAGAATGCGTCACTTTGAACATAGCTGAAGGTTTTTTTTACATTTTGCGTTAAGTGGTTTTTGCAGTTAAGAAGCGTCATCCACCCACATAGCACTGTCATACACATGTCCATTTCCATATCCTGGCTAACTTGTTGCTCTCTGCCCAATCCCAAAACTCACAGCCGAACGACTATTACCAACAGCCTCAGTCGGAACAGTACGAAGAGAACTTTGACGAAGATATGGAGGCCGA
***********************************************************....((((..((((....(((.........)))....)))).......(((.(((.....))))))..............(((((.....(((((.....))..........)))....))))))))).............*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 M061
embryo
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 SRR060682
9x140_0-2h_embryos_total
 M047
female body
 M027
male body		 SRR060663
160_0-2h_embryos_total
 M028
head
 SRR060668
160x9_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106728
larvae
 SRR1106727
larvae
 SRR060685
9xArg_0-2h_embryos_total
...............................TGAACACAGCTGGAGGTTT......................................................................................................................................................................................................... 19 2 4 5.75 23 22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACAAAGCTGGAGGTTT......................................................................................................................................................................................................... 19 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGAAGGTTT......................................................................................................................................................................................................... 19 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGAAGGTTTC........................................................................................................................................................................................................ 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCCTCAGTCGGAACAGTACGAG............................. 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAACCTCAGTCGGAACAGTAC................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TTTGCGTTAAGTGGTTTTTGCA.......................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGGAGGTTTT........................................................................................................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CTCAGTCGGAACAGTACGAAGA........................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACATAGCTGGAGGTATT........................................................................................................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................CCGAACGACTATTACCAACAGCCTCA............................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGTACGAGGAGAACTTTGACGAAGATA.......... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................GCCGAACGACTATTACCAACA................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTCGGAACAGTACGAAGAGAACTTTGAC................. 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CTCAGTCGGAACAGTACGAGGA........................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCCTCAGTCGGAACAGTAC................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TGACGAAGATATGGAGGCCGA 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................TTTGCGTTAAGTGGTTTTTGCAGT........................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AACTTTGACGAAGATATGGAGGCC.. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAGTCGGAACAGTACGAAGAGAACT...................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTGACGAAGATATGGAGG.... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GTACGAGGAGAACTTTGACGAAG............. 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CTCAGTCGGAACAGTACGA.............................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GACGAAGATATGGAGGCC.. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACGAAGAGAACTTTGACGAAGAT........... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGGAACAGTACGAAGAGAACTTTGAC................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGGAACAGTACGAGGAGAACTTT.................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................GACTATTACCAACAGCCTCA............................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GAACAGTACGAAGAGAACTTT.................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GTCCTCAGTCGGAACAGTACGAAGA........................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGGAACAGTACGAGGAGA......................... 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GCCTCAGTCGGAACAGTACG............................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ACCTCAGTCGGAACAGTACGAGGA........................... 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................TGAACAAAGCTGGAGGTTTC........................................................................................................................................................................................................ 20 3 9 0.67 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACTGCTGAAGGTTT......................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CCGAACGACTACTACC....................................................... 16 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................TAGTACTGTCATAAAGATGTC............................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGGAGGTTTCT....................................................................................................................................................................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACAATGCTGAAGGTTT......................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACATAGCTGGAGGTATCT....................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................GTTGTTGCAGTTAAAAAGCG............................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGAAGGTTG......................................................................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACACCTGGAGGTTT......................................................................................................................................................................................................... 19 3 17 0.29 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACAAAGCTGGAGGTATTT....................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CGAACACAGCTGGAGGTTT......................................................................................................................................................................................................... 19 3 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCACAGTACGAGGAGAAATT..................... 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TTTTCGCAGTTTAGAACCGT.............................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................TGAACAAAGCTGGAGGTTTCT....................................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGAAGTTTT......................................................................................................................................................................................................... 19 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGAAGGATTC........................................................................................................................................................................................................ 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TTGTGTTAAGTGATTTTTGC........................................................................................................................................................................... 20 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TTTGGAATCCGCCACTTTGAAC....................................................................................................................................................................................................................... 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................AGGTTGTTGCAGTTAAAAAGC................................................................................................................................................................ 21 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TTTGGAATCCGCCACTTTGAA........................................................................................................................................................................................................................ 21 3 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CGAACACAGCTGAAGGTTT......................................................................................................................................................................................................... 19 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACACAGCTGAATGTTTC........................................................................................................................................................................................................ 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAACAAAGCTGAAGGTATC........................................................................................................................................................................................................ 20 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GCAGTTAAGAACCGTAGT........................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................GGAACATAGCTGATGGTAT......................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CCAATCTTTCTCATAAATCTTACGCAGTGAAACTTGTATCGACTTCCAAAAAAAATGTAAAACGCAATTCACCAAAAACGTCAATTCTTCGCAGTAGGTGGGTGTATCGTGACAGTATGTGTACAGGTAAAGGTATAGGACCGATTGAACAACGAGAGACGGGTTAGGGTTTTGAGTGTCGGCTTGCTGATAATGGTTGTCGGAGTCAGCCTTGTCATGCTTCTCTTGAAACTGCTTCTATACCTCCGGCT
***************************************************....((((..((((....(((.........)))....)))).......(((.(((.....))))))..............(((((.....(((((.....))..........)))....))))))))).............*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 V116
male body		 GSM1528803
follicle cells		 SRR060670
9_testes_total
 M028
head
 SRR060676
9xArg_ovaries_total
................................................................................................................................................................GGGTTAGGGTTTTGAGTGT........................................................................ 19 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................TCTTCGCAGTAGATGGGTC................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................................GGGTTGTCGGAGACACCCTTG..................................... 21 3 2 0.50 1 1 0 0 0 0 0
......................................................................................................TGTATCGTGGCAGTGTG.................................................................................................................................... 17 2 5 0.20 1 0 0 1 0 0 0
.....................................................................................................................................................................................................TGTCGGTGTCAGCCTCGTCA.................................. 20 2 6 0.17 1 0 0 0 1 0 0
....................................................................................................................................................................................................................................CAACCGCTTCTATACCTC..... 18 2 7 0.14 1 0 0 0 0 1 0
................................................AAAAAAATGTCAAGCGCAAGT...................................................................................................................................................................................... 21 3 15 0.07 1 0 0 0 0 0 1
......................................................................................CTTGGAAGTAGGTGGGTCT.................................................................................................................................................. 19 3 19 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:2623476-2623726 - dvi_3593 GGTTAGAAAGAGTATTTAGAATGCGTCACTTTGAAC--------A--TAGCTGAAGGTTTTTT------TTACATTTTGCGTTAAGTGGTTTTTGCAGTTAA----GA-AGCGTCATCC-ACCCACATAG-------------------------C---------------------------------------------ACTGTCATACACATGTCCATTTCC-------------------------------------------------------------------------A--T-ATC---CT---GGCTAACTTGTTGCT-CTCTGCC---------CAATCCCA--AAACTCACAGCCGAACGACTATTACCAACAGCC---------------------------------TCAGTCGGAACAGTACGAAGAGAACTTTGACGAAGATATGGAGGCCGA
droMoj3 scaffold_6540:11824584-11824833 - TATAAAAAAGAGTATTTGTTGTA----------------------------CGGTG----CTTTCAATTCTGTGCGTG-CATTAGCTGGCTTCTGTAGTTAAAAAAGAAATCGCCATCC-ACCCAC--------------------------------------------------CTAAAAAT-----------TATAGCACTGTCCTACACATGTTCATTTCC-------------------------------------------------------------------------A--A-ATC---CT---GCCTAACTTGTTGCT-CTCTGCC---------CAAACGCACAAAACTTACAGCCGAACGAATATTACCAACAG---------------------------------CAGCAGTCGGAACAGTACGAGGAGAACTTCGACGAAGATATGGAGGCCGA
droGri2 scaffold_14624:2322524-2322782 + ---------------------------------------------------TT--------TA------TTGCATATGGCATTAAGTGGTTTTCGTAGTTAA----AA-AGCCCCAGCC-ACCCACACTGAACTGTCATGTCATCTCACACATGTCCATGTGGTCCACGTGTCCATC-TG--TCCCATCTG-----------------TCCACATTTCCATTTTC-------------------------------------------------------------------------A--T-ATC---CT---GCCCCACTTG-------------------------TTGCC---AATCAACA-ACTAACGAATATTACCAACAGCA------GCAGCAGCAACAACAGCAACAT---CAGCAGTCGGAAGAGTACGACGAGAACTTTGACGAAGATATGGAGGCCGA
droWil2 scf2_1100000004902:11103221-11103371 - CAT---------------------------------TTCCAATTG--CCA---------------------------A-TACTGTGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAACTTG---TT-CTTAACC---------CCTTCCC-----CCCCACAGCCCAACGAATATTATCCACAGCA------GCAGCTCCAAA---ATCAACAG---CAGTTGCCGGATCAATACGACGAGAATTTTGACGAAGACATGGAAGCTGA
dp5 2:4970313-4970514 - --------------------------------------------------------------------------------GTCAAGTGGTTTTCAG----CC----AA------CATCCCACGCACAC---------------------------A--------CCA---------CACGAAACCC-----------------------------------------------------------CC-------------ACCCCACTC---------A---TT----CATAG-TA-GT--A-CTC---CCTGGGACTAACCTG---AT-ATCTGAACAATCTGACCACTCGCT---AACCCACAGCCGAACGACTATTACCAACAACA------GC---------------AG------CAGCCGGCGGACCAGTACGAGGAGAACTTCGACGAAGACATGGAGGCTGA
droPer2 scaffold_19:668369-668575 - --------------------------------------------------------------------------------GTCAAGTGGTTTTCAG----CC----AA------CATCCCACGCACAC---------------------------A--------CCA---------CACGAAACCC------------------------------------------------------------C-------------ACCCCACCC---------A---TT----CATAG-TA-GT--A-CTC---CCTGGGACTAACCTG---AT-ATCTGAACCATCTGACCACTCGCT---AACCCACAGCCGAACGACTATTACCAACAACA------GC------------AGCAGCAG---CAGCCGGCGGACCAGTACGAGGAGAACTTCGACGAAGACATGGAGGCCGA
droAna3 scaffold_13340:6538213-6538430 + --------------------------------------------------------------------------------GTTAAGTGATTTTCGAAGTAACAAATGA------CATCCCACACGGC------------------------------------------------------ACA-----------TACGGCACAGTCTC----------------ATTCAAAGACATA--------C-------------GCCACGCCCATTGCTCTTA---TT----CA----TA-AT--A-AAC---CCA--GGCTAACCAG---AT-CTCTGCA---------T-------------TAACAGCCGAACGAGTACTACCAACAG--GCA-CAGC------------AGCAGGGC---CAGCCGGCGGACCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA
droBip1 scf7180000396708:2305708-2305934 - ---------------------------------------------------------------------------------TTAAGTGATTTTCGTAGTAACCAACGA------CATCCCACACGCAC---------------------------ACACG-------------------GTCTCTC---------------------------------------ATTCAAAGACAAACCATTTTACGGGG-------CTGCCACGCCCATTGCTA---TCATCCCA-------TA-ATGAAAAAC---CC---GGCTAACCAG---AT-CTCTGCC---------C-------------TAACAGCCGAACGAGTACTACCAACAGCC------AC------------AGCAGGGC---CAGCCGGCGGATCAGTACGAGGAGAACTTTGACGAGGACATGGAGGCCGA
droKik1 scf7180000302706:2253282-2253502 + ---------------------------------------------------TGGAGATCGTTT------TTGCATGAC-TGCTAAGTGATTTTCGAAGTAGC----GA------CATCCCACACTCAC---------------------------AGACG----CAT---------TT------TG------------------------------------------------------ATTTCCCGG-------------CACACCC---------A---T------A----TT-GT--A-AAC---CC---GGCTAACCCG---CTTTTTTGAC---------CAATCGTT---AACCCACAGACGAACGACTACTATCAACAGCA------CC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA
droFic1 scf7180000453912:2546911-2547132 + ----------------------------------------------------------------------TACATTGT-TGCTAAGTGATTTTCGAGGTAGC----GA------CATCCCACACGCAG---------------------------T--------C-------------AGTCACCC------------------------------------------------------ATTTACCGGCA-------AAACCACACCC---------ATCGTC----CC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTCTGCC---------CAATCGCT---AACCCACAGACGAACGACTACTACCAACAGCAGCAACGGC------------AGGAGGGC---CAACAGGCGGAACAGTACGAGGAGAACTTTGACGAGGACATGGAGGCCGA
droEle1 scf7180000491080:3356979-3357211 + ---------------------------------------------------TGGAGATCACCT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAA----GA------CATCCCACACGCAG---------------------------G--------CAC---------CCATACACTC------------------------------------------------------ATTCACCAGCACCA----CTACCACACCC---------A---TC----CC----TA-GC--G-AAC---CC---GGCTAACTTG---AT-CTCTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA------AGCC------------AGGAGGGC---CAGCAGGCGGAACAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA
droRho1 scf7180000779572:114764-114999 + ----------------------------------------------------GGAGATCGCTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CATCCCACACGCAG---------------------------T--------CAC---------CCAGACACCC------------------------------------------------------ATTTACCAGCACCATACCACACCACACCC---------A---TC----CC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTATGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGACA------AGAC------------AGGAGGGC---CAGCAGGAGGAGCAGTACGAGGAGAACTTCGACGAGGACATGGAAGCCGA
droBia1 scf7180000302075:4138777-4139039 - AGT---------------------------------TGACGGTTTCTTCGATGGCGATCGCTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CATCCCACACGCAG---------------------------C--------CAT---------TTAGACACCC----ATTTC-----------------------------G-------------ACATTTACCGG-------------CACACCCATAGCCA---TCGTCCGACCC----TA-GC--A-AAC---CC---GGCTAACCCG---AT-CTCTGCG---------TAACCGCC---AATCCACAGACGAGCGACTACTACCAAGC-----C-AGAC------------AGGAGGGC---CAGCAGGCGGAACAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA
droTak1 scf7180000414561:107468-107698 - AGT---------------------------------TGACGGTTT--TTATTGGAGATCGGTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----CA------CATCCCACACGCAG---------------------------C--------CAT---------TTAGA-----------------------------------------------------------------------------------CACCC---------A---TCCAACCC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTCTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAATC-----C-AGAC------------AGGAGGGCCAGCAGCAGGCGGAACAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA
droEug1 scf7180000409804:387465-387696 - G----------------------------------------------------------TTTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CATCCCACACACAC---------------------------AC----CGACAT---------TAAGACACTC------------------------------------------------------ATATACCGGGA-----------CACACCC---------A---TCTAAACC---ATATGT--A-AACCAACC---GGCTAACTTG---AT-CTCTGCG---------TAATTGTT---AACCCACAGACGAACGACTACTATCAATC-----C-CGAC------------AGGAGGGC---CAGCAGGCGGAACAGTACGAGGAGAATTTCGACGAGGACATGGAGGCTGA
dm3 chr3R:12942938-12943168 - ---------------------------------------------------TGGAGATCGCTC------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CGTCCCACACGCAG---------------------------T--------CAT---------CAAGACACCC------------------------------------------------------ATTTACCGG-------------CACACCC---------A---TCCAAATC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-ATTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTTGACGAGGACATGGAGGCCGA
droSim2 3r:8317081-8317311 + ---------------------------------------------------TGGAGATCGCTC------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CGTCCCACACGCAG---------------------------T--------CAT---------CAAGACACCC------------------------------------------------------ATTTAGCGG-------------CACACCC---------A---TCCAAACC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA
droSec2 scaffold_12:1212517-1212773 + CAGG------AG----TGGAGTT-------------TGACGCTTT--TTAATGGAGATCGCTC------TTGCATAGT-CGCTAAGTGATTTTCGAAGTAAC----GA------CGTCCCACACGCAG---------------------------T--------CAT---------CAAGACACCC------------------------------------------------------ATTTAGCGG-------------CACACCC---------A---TCCAAACC----TA-GT--A-TAC---CC---GGCTAACTTG---AT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTCGACGAAGATATGGAGGCCGA
droYak3 3R:11439640-11439767 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---CC---GGCTAACTTG---CT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCG--GCC-AGAC------------AGGAGGCCCATCAGCAGGCGGACCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA
droEre2 scaffold_4770:8684758-8685004 + ---------------------------------------------------TGGAGATCGTTC------TGGCATAGT-TGCTAAGTGATTTTCGGAGTAAC----GA------CGTCCCACACGCAG---------------------------TCACGCAGTCAC---------CAAGCCACCC----ATTTA-----------------------------C-------------CCATTTACCGG-------------CACACCC---------A---GCCAACCC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACCACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGACCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGTTAGAAAGAGTATTTAGAATGCGTCACTTTGAAC--------A--TAGCTGAAGGTTTTTT------TTACATTTTGCGTTAAGTGGTTTTTGCAGTTAA----GA-AGCGTCATCC-ACCCACATAG-------------------------C---------------------------------------------ACTGTCATACACATGTCCATTTCC-------------------------------------------------------------------------A--T-ATC---CT---GGCTAACTTGTTGCT-CTCTGCC---------CAATCCCA--AAACTCACAGCCGAACGACTATTACCAACAGCC---------------------------------TCAGTCGGAACAGTACGAAGAGAACTTTGACGAAGATATGGAGGCCGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................AGCC---------------------------------TCAGTCGGAACAGTACGAG.............................2311.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................TTTGCGTTAAGTGGTTTTTGCA.....................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------TCAGTCGGAACAGTACGAAGA...........................2211.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CCGAACGACTATTACCAACAGCC---------------------------------TCA.............................................2611.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GCCGAACGACTATTACCAACA....................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGAACAGTACGAAGAGAACTTTGAC.................2811.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGCC---------------------------------TCAGTCGGAACAGTAC................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAAGATATGGAGGCCGA2111.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................TTTGCGTTAAGTGGTTTTTGCAGT...................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGACGAAGATATGGAGGCC..2411.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCGGAACAGTACGAAGAGAACT......................2511.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGAAGATATGGAGG....1811.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------TCAGTCGGAACAGTACGA..............................1911.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGATATGGAGGCC..1811.001000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGAGAACTTTGACGAAGAT...........2311.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAACAGTACGAAGAGAACTTTGAC.................2611.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GACTATTACCAACAGCC---------------------------------TCA.............................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGTACGAAGAGAACTTT....................2111.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................GCC---------------------------------TCAGTCGGAACAGTACG...............................2011.001000000000001000000000000000000000000000000000000000000000000000
droMoj3
TATAAAAAAGAGTATTTGTTGTA----------------------------CGGTG----CTTTCAATTCTGTGCGTG-CATTAGCTGGCTTCTGTAGTTAAAAAAGAAATCGCCATCC-ACCCAC--------------------------------------------------CTAAAAAT-----------TATAGCACTGTCCTACACATGTTCATTTCC-------------------------------------------------------------------------A--A-ATC---CT---GCCTAACTTGTTGCT-CTCTGCC---------CAAACGCACAAAACTTACAGCCGAACGAATATTACCAACAG---------------------------------CAGCAGTCGGAACAGTACGAGGAGAACTTCGACGAAGATATGGAGGCCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGTACGAGGAGAACTTCGAC.................2411.001000001
........................................................................................................................ACCCAC--------------------------------------------------CTAAAAAT-----------TATAGCACTGTC.......................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAGATATGGAGGC...1811.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------CAGCAGTCGGAACAGTACGAGGA...........................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................ACCAACAG---------------------------------CAGCAGTCGGAAC.....................................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTCGGAACAGTACGAGGA...........................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------CAGCAGTCGGAACAGTACGA..............................2211.001000001
...............................................................................................................................................................................................................................................................................................................................................................................CGAACGAATATTACCAACAG---------------------------------CAGC..............................................2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACTTCGACGAAGATATGGAGGC...2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------CAGCAGTCGGAACAGTACGAGGAG..........................2611.001100000
......................................................TG----CTTTCAATTCTGTGCGTG-C......................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
---------------------------------------------------TT--------TA------TTGCATATGGCATTAAGTGGTTTTCGTAGTTAA----AA-AGCCCCAGCC-ACCCACACTGAACTGTCATGTCATCTCACACATGTCCATGTGGTCCACGTGTCCATC-TG--TCCCATCTG-----------------TCCACATTTCCATTTTC-------------------------------------------------------------------------A--T-ATC---CT---GCCCCACTTG-------------------------TTGCC---AATCAACA-ACTAACGAATATTACCAACAGCA------GCAGCAGCAACAACAGCAACAT---CAGCAGTCGGAAGAGTACGACGAGAACTTTGACGAAGATATGGAGGCCGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CAT---------------------------------TTCCAATTG--CCA---------------------------A-TACTGTGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAACTTG---TT-CTTAACC---------CCTTCCC-----CCCCACAGCCCAACGAATATTATCCACAGCA------GCAGCTCCAAA---ATCAACAG---CAGTTGCCGGATCAATACGACGAGAATTTTGACGAAGACATGGAAGCTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................AACGAATATTATCCACAGCA------...........................................................................2012.00202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGCCGGATCAATACGAC.............................2012.00200020
...........................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTCCAAA---ATCAACAG---C.................................................2012.00202000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGACGAAGACATGGAAGCT..2312.00200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGGATCAATACGAC.............................1811.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................ACAGCA------GCAGCTCCAAA---ATC..........................................................2011.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGACATGGAAGCT..1811.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGAATTTTGACGAAGAC...........2111.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAATTTTGACGAAGACATGGA......2411.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACGAAGACATGGAAGC...2011.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................CCAAA---ATCAACAG---CAGTTGCCG.........................................2211.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTCCAAA---ATCAACAG---CA................................................2111.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGATCAATACGACGAGC.........................2311.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................CCACAGCA------GCAGCTCCAAA---AT...........................................................2111.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGGATCAATACGAC.............................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAGTTGCCGGATCAATACGA..............................2111.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAG---CAGTTGCCGGATCAC...................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGACGAAGACATGGAAGCTG.2411.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A---ATCAACAG---CAGTTGCCGGATCA....................................2311.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAAA---ATCAACAG---CAGTTGCCGGAT......................................2811.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................CCACAGCA------GCAGCTCCAAA---ATCAACAG---C.................................................2811.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAAGACATGGAAGC...1811.00101000
..................................................................................................................................................................................................................................................................................................................................................................................ACGAATATTATCCACAGCA------...........................................................................1920.50100010
dp5
--------------------------------------------------------------------------------GTCAAGTGGTTTTCAG----CC----AA------CATCCCACGCACAC---------------------------A--------CCA---------CACGAAACCC-----------------------------------------------------------CC-------------ACCCCACTC---------A---TT----CATAG-TA-GT--A-CTC---CCTGGGACTAACCTG---AT-ATCTGAACAATCTGACCACTCGCT---AACCCACAGCCGAACGACTATTACCAACAACA------GC---------------AG------CAGCCGGCGGACCAGTACGAGGAGAACTTCGACGAAGACATGGAGGCTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGACCAGTACGAGGAGAACTTC....................2511.0011000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAGACATGGAGGCT..1911.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................AACA------GC---------------AG------CAGCCGGCGGACCA....................................2211.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................AG------CAGCCGGCGGACCAGTACGAGGAGAA........................2811.0010000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACTTCGACGAAGAC...........2011.0010000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGAGGAGAACTTCG...................1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TACCAACAACA------GC---------------AG------CAGCCGGC..........................................2311.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCGGACCAGTACGAGGAGAA........................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCCGGCGGACCAGTAC................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGAGAACTTCGACGAAGACA..........2411.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACTTCGACGAAGACATGGAGGC...2711.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACGAGGAGAACTTCGAC.................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................CTATTACCAACAACA------GC---------------AG------CAGCCGG...........................................2611.0010000000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCGGACCAGTACGAGG............................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCGACGAAGACATGGAGGCT..2511.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCGGACCAGTACGAGGAG..........................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACGAAGACATGGAGGCT..2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................AACAATCTGACCACTCGCT---AACCCACAG........................................................................................................2811.0010100000000
droPer2
--------------------------------------------------------------------------------GTCAAGTGGTTTTCAG----CC----AA------CATCCCACGCACAC---------------------------A--------CCA---------CACGAAACCC------------------------------------------------------------C-------------ACCCCACCC---------A---TT----CATAG-TA-GT--A-CTC---CCTGGGACTAACCTG---AT-ATCTGAACCATCTGACCACTCGCT---AACCCACAGCCGAACGACTATTACCAACAACA------GC------------AGCAGCAG---CAGCCGGCGGACCAGTACGAGGAGAACTTCGACGAAGACATGGAGGCCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCGGACCAGTACGAGGAGA.........................2312.002000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---CAGCCGGCGGACCA....................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGCCGGCGGACC.....................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................CGACTATTACCAACAACA------GC------------.............................................................2011.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---CAGCCGGCGGACCA....................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGGAGAACTTCGAC.................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTACGAGGAGAACTTCGA..................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACTTCGACGAAGACATGGAGGCC..2811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................C------------AGCAGCAG---CAGCCGGCG.........................................1860.171010000
...........................................................................................................................................................................................................................................................................................................................................................................................................GC------------AGCAGCAG---CAGCCGGCGGG.......................................21110.091000010
..............................................................................................................................................................................................................................................................................................................................................................................................AACAACA------GC------------AGCAGCAG---CAGC..............................................21200.051001000
droAna3
--------------------------------------------------------------------------------GTTAAGTGATTTTCGAAGTAACAAATGA------CATCCCACACGGC------------------------------------------------------ACA-----------TACGGCACAGTCTC----------------ATTCAAAGACATA--------C-------------GCCACGCCCATTGCTCTTA---TT----CA----TA-AT--A-AAC---CCA--GGCTAACCAG---AT-CTCTGCA---------T-------------TAACAGCCGAACGAGTACTACCAACAG--GCA-CAGC------------AGCAGGGC---CAGCCGGCGGACCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................A-CAGC------------AGCAGGGC---CAGCCGGC..........................................2113.003030000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCAGTACGAGGAGAACTTC....................2212.002000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGGC---CAGCCGGCGGACC.....................................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGGCGGACCAGTACGAGGA...........................2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCAGTACGAGGAGAACTTCGACGA...............2711.001100000
..............................................................................................................................................................................................................CTC----------------ATTCAAAGACATA--------C-------------GCCACGCC..........................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGGACATGGAGGC...1811.001010000
...........................................................................................................................................................................................................................................................................................................................................................................CAGCCGAACGAGTACTACC........................................................................................1911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................GCA-CAGC------------AGCAGGGC---CAGCCGGC..........................................2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCAGTACGAGGAGAACTTCGAC.................2511.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGGC---CAGCCGGCGGACCAGTACGA..............................2711.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................GC------------AGCAGGGC---CAGCCGGCGGA.......................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................ACAG--GCA-CAGC------------AGCAGGGC---CAGCCGGC..........................................2711.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGAGGAGAACTTCGAC.................2011.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................GCA-CAGC------------AGCAGGGC---CAGCC.............................................2011.001010000
droBip1
---------------------------------------------------------------------------------TTAAGTGATTTTCGTAGTAACCAACGA------CATCCCACACGCAC---------------------------ACACG-------------------GTCTCTC---------------------------------------ATTCAAAGACAAACCATTTTACGGGG-------CTGCCACGCCCATTGCTA---TCATCCCA-------TA-ATGAAAAAC---CC---GGCTAACCAG---AT-CTCTGCC---------C-------------TAACAGCCGAACGAGTACTACCAACAGCC------AC------------AGCAGGGC---CAGCCGGCGGATCAGTACGAGGAGAACTTTGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotal
No Reads
droKik1
---------------------------------------------------TGGAGATCGTTT------TTGCATGAC-TGCTAAGTGATTTTCGAAGTAGC----GA------CATCCCACACTCAC---------------------------AGACG----CAT---------TT------TG------------------------------------------------------ATTTCCCGG-------------CACACCC---------A---T------A----TT-GT--A-AAC---CC---GGCTAACCCG---CTTTTTTGAC---------CAATCGTT---AACCCACAGACGAACGACTACTATCAACAGCA------CC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotal
No Reads
droFic1
----------------------------------------------------------------------TACATTGT-TGCTAAGTGATTTTCGAGGTAGC----GA------CATCCCACACGCAG---------------------------T--------C-------------AGTCACCC------------------------------------------------------ATTTACCGGCA-------AAACCACACCC---------ATCGTC----CC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTCTGCC---------CAATCGCT---AACCCACAGACGAACGACTACTACCAACAGCAGCAACGGC------------AGGAGGGC---CAACAGGCGGAACAGTACGAGGAGAACTTTGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------TGGAGATCACCT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAA----GA------CATCCCACACGCAG---------------------------G--------CAC---------CCATACACTC------------------------------------------------------ATTCACCAGCACCA----CTACCACACCC---------A---TC----CC----TA-GC--G-AAC---CC---GGCTAACTTG---AT-CTCTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA------AGCC------------AGGAGGGC---CAGCAGGCGGAACAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------GGAGATCGCTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CATCCCACACGCAG---------------------------T--------CAC---------CCAGACACCC------------------------------------------------------ATTTACCAGCACCATACCACACCACACCC---------A---TC----CC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTATGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGACA------AGAC------------AGGAGGGC---CAGCAGGAGGAGCAGTACGAGGAGAACTTCGACGAGGACATGGAAGCCGASizeHit CountTotal NormTotal
No Reads
droBia1
AGT---------------------------------TGACGGTTTCTTCGATGGCGATCGCTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CATCCCACACGCAG---------------------------C--------CAT---------TTAGACACCC----ATTTC-----------------------------G-------------ACATTTACCGG-------------CACACCCATAGCCA---TCGTCCGACCC----TA-GC--A-AAC---CC---GGCTAACCCG---AT-CTCTGCG---------TAACCGCC---AATCCACAGACGAGCGACTACTACCAAGC-----C-AGAC------------AGGAGGGC---CAGCAGGCGGAACAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotal
No Reads
droTak1
AGT---------------------------------TGACGGTTT--TTATTGGAGATCGGTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----CA------CATCCCACACGCAG---------------------------C--------CAT---------TTAGA-----------------------------------------------------------------------------------CACCC---------A---TCCAACCC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTCTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAATC-----C-AGAC------------AGGAGGGCCAGCAGCAGGCGGAACAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotal
No Reads
droEug1
G----------------------------------------------------------TTTT------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CATCCCACACACAC---------------------------AC----CGACAT---------TAAGACACTC------------------------------------------------------ATATACCGGGA-----------CACACCC---------A---TCTAAACC---ATATGT--A-AACCAACC---GGCTAACTTG---AT-CTCTGCG---------TAATTGTT---AACCCACAGACGAACGACTACTATCAATC-----C-CGAC------------AGGAGGGC---CAGCAGGCGGAACAGTACGAGGAGAATTTCGACGAGGACATGGAGGCTGASizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------------------TGGAGATCGCTC------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CGTCCCACACGCAG---------------------------T--------CAT---------CAAGACACCC------------------------------------------------------ATTTACCGG-------------CACACCC---------A---TCCAAATC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-ATTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTTGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACTTTGACGAGGACA..........1919.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................C-AGAC------------AGGAGGGC---CAGCAGGCG.........................................2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGTACGAGGAGAACTTTGA..................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGGAGAACTTTGACGA...............2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGAGGAGAACTTTGACGA...............2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCGGATCAGTACGAGG............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000020000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTTGACGAGGACATGG.......2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAACTTTGACGAGGAC...........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGATCAGTACGAGGAGAACTTTGAC.................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATCAGTACGAGGAGAACTTTGA..................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................A--GCC-AGAC------------AGGAGGGC---CAGCAGGCG.........................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000010000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGATCAGTACGAGGA...........................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGGAGAACTTTGACGAGG.............2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AACGACTACTACCAGCCA--GCC-AGAC------------A............................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATCAGTACGAGGAGAACTTTGACGA...............2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGAGGAGAACTTTGACGAGGAC...........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGGAGAACTTTGACGA...............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGACACCC------------------------------------------------------ATTTACCGG-------------CACA............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ACGACTACTACCAGCCA--GCC-AGAC------------AGGA.........................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CCA--GCC-AGAC------------AGGAGGGC---CAG...............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GC---CAGCAGGCGGATCAGTACGAG.............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGGACATGGAGGCC..1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ACTACCAGCCA--GCC-AGAC------------AGGA.........................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATCAGTACGAGGAGAACTTT....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATCAGTACGAGGAGAACT......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................G---AT-ATTTGCG---------TAATCGCT---AAC..............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ACGAACGACTACTACCAGC.....................................................................................1912.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGAGGAGAACTTTGACGAGGA............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TAAGTGATTTTCGAAGTAAC----............................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGGAGAACTTTGACGAGGACA..........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGATCAGTACGAGGAGAAC.......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ACGAACGACTACTACCAGCC....................................................................................2012.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTTGACGAGGACATGGAGG....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGACGAGGACATGGAGG....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTTGACGAGGACATGGAG.....2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ACTACTACCAGCCA--GCC-AGAC------------AGGAGG.......................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................A--GCC-AGAC------------AGGAGGGC---CAGCA.............................................2112.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGAGGACATGGAGG....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTTGACGAGGACATGGAGGCC..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTACTACCAGCCA--GCC-AGAC------------AGGA.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAACTTTGACGAGAG............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATCAGTACGAGGAGAA........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGAGGACATGGAGGCCG.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATCAGTACGAGGAGAACTTTGACG................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CGACTACTACCAGCCA--GCC-AGAC------------AGGAGG.......................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAACTTTGACGAGGACC..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAGAACTTTGACGAGGACATG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGACATGGAGGCC..1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACTTTGACGAGGAC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TACCAGCCA--GCC-AGAC------------AGGAGGG......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................AGCCA--GCC-AGAC------------AGGAGGGC---CAGC..............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGAGGAGAACTTTGACGAGG.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGAACGACTACTACCAGCCA--GCC-A............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCGGATCAGTACGAGGA...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTACGAGGAGAACTTTGA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................T---------CAAGACACCC------------------------------------------------------ATTTACCGG-------------CACACCC---------A---TC..........................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTACGAGGAGAACTTTGAC.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGAACGACTACTACCAGCCA--GCC-AGA..........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ACAGACGAACGACTACTACCG.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACTTTGACGAG..............1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATCAGTACGAGGAG..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCGGATCAGTACGAGGAGA.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATCAGTACGAGGAGAACTTTGACG................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGAC------------AGGAGGGC---CAGCAGGCGG........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GAC------------AGGAGGGC---CAGCAGGCGGAT......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACTTTGACGAGGACAT.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGAGAACTTTGACGAGGAC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACTTTGACGAGGACATGGAGGCC..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGACGAGGACATGGAG.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................ACTTG---AT-ATTTGCG---------TAATC.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATCAGTACGAGGAGA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGTACGAGGAGAACTTTGACGA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTTGACGAGGACATG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ACGAACGACTACTACCAGCCA--GCC-AG...........................................................................2611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACTTTGACGAGGACAA.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGAC------------AGGAGGGC---CAGCAG............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ACGAACGACTACTACCAGCCA--GCC-A............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GAC------------AGGAGGGC---CAGCAGGCGGA.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGC---CAGCAGGCGGATCAGTACGAGG............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCG.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCGCT---AACCCACAGACGAACG.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGGATCAGTACGAGGAGAACTTT....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGACGAGGACATGGAGGC...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGACGAGGACATGGAGGC...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCAGTACGAGGAGAAC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTACGAGGAGAACTTTG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AC------------AGGAGGGC---CAGCAGGCGGA.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GAC------------AGGAGGGC---CAGCAGGCG.........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGT........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACTTTGACGAGGACA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAACTTTGACGAGGA............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGC..............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ACTACTACCAGCCA--GCC-AGAC------------A............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGACGAGGACATGGAGGC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTTGCG---------TAATCGCT---AACCCACAG........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ACAGACGAACGACTACTACCAGCCA--GCC-.............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGAGAACTTTGACGAGGACAT.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGAC------------AGGAGGGC---CAGCAGG...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGGGC---CAGCAGGCGGATCAGTACGAG.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ACTACCAGCCA--GCC-AGAC------------AG...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................GATTTTCGAAGTAAC----GA------CGTCCCACA...........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ACGACTACTACCAGCCA--GCC-AGAC------------.............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TACCAGCCA--GCC-AGAC------------AGGAGGGC---CAG...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AGACGAACGACTACTACCAG......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGCGGATCAGTACGG..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTTGACGAGGACATGGA......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACTTTGACGAGG.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTACTACCAGCCA--GCC-AGAC------------AGG..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGAACGACTACTACCAGCCA--GC...............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAACTTTGACGAGGACA..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTTGACGAGGACATGGAGGC...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACTTTGACGAGGACATG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGAGGACATGGAGGCCGA2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GAC------------AGGAGGGC---CAGCAGGCGGC.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AACCCACAGACGAACGAC...............................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGAACGACTACTACCAGCCA--GCC-.............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACTTTGACGAGGACATGGA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACTTTGACGAGGA............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTTGACGAGGACT..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGAGAACTTTGACGA...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGGAGAACTTTGAATC...............2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGAGGACATGGAGGCATC2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
---------------------------------------------------TGGAGATCGCTC------TTGCATAGT-TGCTAAGTGATTTTCGAAGTAAC----GA------CGTCCCACACGCAG---------------------------T--------CAT---------CAAGACACCC------------------------------------------------------ATTTAGCGG-------------CACACCC---------A---TCCAAACC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................GACGAACGACTACTACCAGCCA--GCC-AGA..........................................................................2811.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGACGAGGACATGGAGGC...2211.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGGACATGGAGGCC..1811.00101000000000000000
droSec2
CAGG------AG----TGGAGTT-------------TGACGCTTT--TTAATGGAGATCGCTC------TTGCATAGT-CGCTAAGTGATTTTCGAAGTAAC----GA------CGTCCCACACGCAG---------------------------T--------CAT---------CAAGACACCC------------------------------------------------------ATTTAGCGG-------------CACACCC---------A---TCCAAACC----TA-GT--A-TAC---CC---GGCTAACTTG---AT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGATCAGTACGAGGAGAACTTCGACGAAGATATGGAGGCCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGACGAAGATATGGA......1911.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGGCGGATCAGTACGAG.............................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................ACCAGCCA--GCC-AGAC------------AGGAGGGC---..................................................2311.0010001
droYak3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---CC---GGCTAACTTG---CT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACTACCAGCCG--GCC-AGAC------------AGGAGGCCCATCAGCAGGCGGACCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................TACCAGCCG--GCC-AGAC------------AGGAGGCCCC...................................................2611.00100000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCATCAGCAGGCGGACCA....................................2111.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTCGACGAGGACATGGA......2211.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................GCCG--GCC-AGAC------------AGGAGGCCCATCAGCAGGC..........................................3011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................GAACGACTACTACCAGCCG--GC...............................................................................2111.00101000000000
droEre2
---------------------------------------------------TGGAGATCGTTC------TGGCATAGT-TGCTAAGTGATTTTCGGAGTAAC----GA------CGTCCCACACGCAG---------------------------TCACGCAGTCAC---------CAAGCCACCC----ATTTA-----------------------------C-------------CCATTTACCGG-------------CACACCC---------A---GCCAACCC----TA-GT--A-AAC---CC---GGCTAACTTG---AT-CTTTGCG---------TAATCGCT---AACCCACAGACGAACGACTACCACCAGCCA--GCC-AGAC------------AGGAGGGC---CAGCAGGCGGACCAGTACGAGGAGAACTTCGACGAGGACATGGAGGCCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................A--GCC-AGAC------------AGGAGGGC---CAGCAGGC..........................................2412.0021000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGCGGACCAGTACGAGGAGAACTT.....................2711.0011000000
.................................................................................................................................................................................................TA-----------------------------C-------------CCATTTACCGG-------------CACACCC---------A---............................................................................................................................................................................................2211.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCAGTACGAGGAGAACTTCGACG................2611.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCGACGAGGACATGGA......2111.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCAGTACGAGGAGAACTT.....................2111.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................AGAC------------AGGAGGGC---CAGCAG............................................1811.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACGAGGACATGGAGGC...2111.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGGACATGGAGGCC..2011.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................GACGAACGACTACCACCAGC.....................................................................................2011.0011000000

Generated: 05/19/2015 at 12:25 PM