ID:

dvi_3362

 Coordinate:

scaffold_12855:1196572-1196639 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.2 -3.1 -3.0

Flybase annnotation

CDS [Dvir\GJ10642-cds]; CDS [Dvir\GJ10642-cds]; exon [dvir_GLEANR_10551:2]; exon [dvir_GLEANR_10551:3]; intron [Dvir\GJ10642-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------##################################################
TTCCTGGAACGATGGCCAGCTGAACGATGACCAAAGCACAACCGATACTTGTGAGTAATTATTGCTGCAGCAGCCAGATTGTGTCCTCTTACTGATTCCCAACTTTCGACAATTGCAGCTAGTGCCGCGACAGACAGCACCTCGTATCAGAATGGTGGCCACATGCTG
******************************************************************((((......((..((....((.....))......))..)).....))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 M027
male body		 SRR060668
160x9_males_carcasses_total
 M061
embryo
 M028
head
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106717
embryo_6-8h
 SRR1106725
embryo_14-16h
 SRR1106726
embryo_14-16h
 SRR060669
160x9_females_carcasses_total
 SRR1106729
mixed whole adult body
.....GGAACGATGGCCAGCTGAAC............................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GCTGAACGATGACCAAAGCACAACC............................................................................................................................. 25 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GCCGCGACAGACAGCACCTCGT....................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GCTGAACGATGACCAAAGCACA................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GGCCAGCTGAACGATGACCA....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAGTGCCGCGACAGACAGCACC........................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CTTCTAGTGCCGCGACAGAC................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TTCTAGTGCCGCGACAGACAGCACCTCG........................ 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CACCTCGTATCAGAATGGT............ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................GCCGCGACAGACAGCACCTCG........................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGCACCTCGTATCAGAATGGTGGC......... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAGTGCCGCGACAGACAGCACCTC......................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AGTGCCGCGACAGACAGCACCTC......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AACGATGGCCAGCTGAACGAT............................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ATGACCAAAGCACAACCGATA......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CAGAATGGTGGCCACATGCT. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AACGATGGCCAGCTGAACGATGAC......................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................GAACGATGACCAAAGCACAACCGATACT....................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
TTCCTGGAACGATGGCCAGCT................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCGCGACAGACAGCACCTCGT....................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........ACGATGGCCAGCTGAACGATGACCAAAGCACAACCGATACTT...................................................................................................................... 42 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................AGCTGAACGATGACCAAAGCAC................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GACAGCACCTCGTATCAGA................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GACAGACAGCACCTCGTATCAGAAT............... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............GCCAGCTGAACGATGACCAAAGCACAACC............................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GCCGCGACAGACAGCACCTCGTATCA................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TCCCAACTTTCGACAATTGCAG.................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCGCGACAGACAGCACCTCGTA...................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GACAGCACCTCGTATCAGAATGGTGGC......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AACGATGGCCAGCTGAACGATGACCAAAGCACAACCGATACTT...................................................................................................................... 43 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................GAACGATGACCAAAGCACAACC............................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GACCAAAGCACAACCGATACT....................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAGTGCCGCGACAGACAGCACCT.......................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GACAGCACCTCGTATCAGAATGGT............ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....TGGAACGATGGCCAGCTGAACG.............................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................ACAGCACCTCGTATCAGAATGGTGGCCC....... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GCTGAACGATGACCAAAGCACAACCG............................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGCACCTCGTATCAGAATGATGGCCA....... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TGAACGATGACCAAAGCACAACCGATAC........................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................CCTCGTATCAGAATGGTGGCCA....... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GCAGCAGCCAGATTGTGTCCTCTT.............................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................GCCGCGACAGACAGCACCTC......................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TTCCCAACTTTCGACAATTGCAG.................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................AGCTGAACGATGACCAAAGCACAAC.............................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CTCGTATCAGAATGGTGGC......... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ATGACCAAAGCACAACCGATACTTCT.................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CGACAATTGTAGTTAGTACC.......................................... 20 3 15 0.13 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................AGAACGGTGTCCACATGGT. 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................AATGATTGCTGCAGC................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AAGGACCTTGCTACCGGTCGACTTGCTACTGGTTTCGTGTTGGCTATGAACACTCATTAATAACGACGTCGTCGGTCTAACACAGGAGAATGACTAAGGGTTGAAAGCTGTTAACGTCGATCACGGCGCTGTCTGTCGTGGAGCATAGTCTTACCACCGGTGTACGAC
**************************************************((((......((..((....((.....))......))..)).....))))..****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR1106729
mixed whole adult body
 SRR060684
140x9_0-2h_embryos_total
.............CCGTTGGACTTGCTACTGGGT...................................................................................................................................... 21 3 1 3.00 3 3 0 0
.............CCGTTCTACTTGCTACTGGGT...................................................................................................................................... 21 3 1 2.00 2 2 0 0
.............CCGGTGTACTTGCTACTGGTC...................................................................................................................................... 21 3 4 1.75 7 0 7 0
.............CCGGTCGATTTGCTACTGGGC...................................................................................................................................... 21 3 2 1.50 3 3 0 0
.............CCGGTCGAATTGCTACTGGGC...................................................................................................................................... 21 3 2 1.50 3 3 0 0
..............CGGTCTACTTGCTACTGGGC...................................................................................................................................... 20 3 5 1.20 6 6 0 0
.............CCGGTCTAGTTGCTACTGGGT...................................................................................................................................... 21 3 2 1.00 2 2 0 0
.............CCGGTCTACTTGGTACTGGTT...................................................................................................................................... 21 2 1 1.00 1 1 0 0
.............CCGGTCTACTTGCTACTGGGC...................................................................................................................................... 21 3 2 1.00 2 2 0 0
.............CCGGTCGAATGGCTACTGGGT...................................................................................................................................... 21 3 1 1.00 1 1 0 0
..............CGTTCTACTTGCTACTGGTT...................................................................................................................................... 20 2 1 1.00 1 1 0 0
.............CCGGTCGATTTGCTACAGGGT...................................................................................................................................... 21 3 1 1.00 1 1 0 0
..............CGGTCTACTTGCTGCTGGTT...................................................................................................................................... 20 2 1 1.00 1 1 0 0
.............CCGGTCTATTTGCTACTGGGT...................................................................................................................................... 21 3 2 1.00 2 2 0 0
.....................CTTGCTACTGGGTGCGTGTT............................................................................................................................... 20 2 1 1.00 1 1 0 0
.............CCGTTCTACTTGCTACTGGTC...................................................................................................................................... 21 3 3 0.67 2 2 0 0
.............CCCGTCCACTTGCTACTGGGT...................................................................................................................................... 21 3 2 0.50 1 1 0 0
..............TGGTGGACTTGCTACTGGGT...................................................................................................................................... 20 3 2 0.50 1 1 0 0
..............CGGTCGAGTTGCTACTGGGT...................................................................................................................................... 20 2 2 0.50 1 1 0 0
.............CCGGTGGAGTTGCTACTGGGT...................................................................................................................................... 21 3 2 0.50 1 1 0 0
.............TCGGTCGATTTGCTACTGGGT...................................................................................................................................... 21 3 2 0.50 1 1 0 0
..............CGGTCTAATTGCTACTGGGT...................................................................................................................................... 20 3 4 0.50 2 2 0 0
.............CCGTTCTACTTGCTACTGGCT...................................................................................................................................... 21 3 2 0.50 1 1 0 0
..............CGGTCGAATGGCTACTGGGT...................................................................................................................................... 20 3 2 0.50 1 1 0 0
..............CGGTCTAGTTGCTACTGGGT...................................................................................................................................... 20 3 4 0.50 2 2 0 0
....................CCGTGCTACTGGTTACGTGTT............................................................................................................................... 21 3 2 0.50 1 1 0 0
..............CGTTCGACTTGCTACTGGGC...................................................................................................................................... 20 3 5 0.40 2 2 0 0
.............CCTTTCTACTTGCTACTGGTT...................................................................................................................................... 21 3 3 0.33 1 1 0 0
.............CCGGTCGAGTTGCTACTGGGC...................................................................................................................................... 21 3 6 0.33 2 2 0 0
............TCCCGTCGACTTGCTACGGGTT...................................................................................................................................... 22 3 3 0.33 1 1 0 0
..............CGGTCTATTTGCTACTGGGT...................................................................................................................................... 20 3 6 0.33 2 2 0 0
.............CCGTGCGAGTTGCTACTGGTT...................................................................................................................................... 21 3 3 0.33 1 1 0 0
.............CCCGTCTACTTGCTACTGGTC...................................................................................................................................... 21 3 3 0.33 1 1 0 0
.............CCGGTATACTTGCTACTGGT....................................................................................................................................... 20 2 3 0.33 1 1 0 0
.............CCGGTCTACTGGCTACTGGGT...................................................................................................................................... 21 3 3 0.33 1 1 0 0
.....................CCTGCTACTGGGTGCGTGTT............................................................................................................................... 20 3 6 0.33 2 2 0 0
.............CCGGTCCAATTGCTACTGGG....................................................................................................................................... 20 3 4 0.25 1 1 0 0
.............CTCGTCGACTTGCTACTGGGT...................................................................................................................................... 21 3 4 0.25 1 1 0 0
..............CGGGCGACTTGCTACTGGGC...................................................................................................................................... 20 3 4 0.25 1 1 0 0
..............CGGTGGACTTGCTACTGGGC...................................................................................................................................... 20 3 8 0.25 2 2 0 0
.............CCGGTCGAGCTGCTACTGGGT...................................................................................................................................... 21 3 4 0.25 1 1 0 0
..............CGTTCTACTTGCTACTGGGT...................................................................................................................................... 20 3 4 0.25 1 1 0 0
..............CGGTGGAATTGCTACTGGGT...................................................................................................................................... 20 3 4 0.25 1 1 0 0
..............CGGTCTACTTGGTACTGGGT...................................................................................................................................... 20 3 4 0.25 1 1 0 0
..............CGTTCTACTTGCTACTGGTC...................................................................................................................................... 20 3 10 0.20 2 2 0 0
..............................................................GCGACGTAGTCGGTCTACCAC..................................................................................... 21 3 5 0.20 1 1 0 0
.............CCGGTCTAATTGCTACTGGTC...................................................................................................................................... 21 3 5 0.20 1 1 0 0
.....................CGTGCTACTGGGTACGTGTT............................................................................................................................... 20 3 5 0.20 1 1 0 0
..............CGGTCGATTTGCTACAGGGT...................................................................................................................................... 20 3 10 0.20 2 2 0 0
..............CGGTGGATTTGCTACTGGGT...................................................................................................................................... 20 3 11 0.18 2 2 0 0
..............CGGTCGATTTGCTACTGGGC...................................................................................................................................... 20 3 6 0.17 1 1 0 0
..............CGTTCGAATTGCTACTGGGT...................................................................................................................................... 20 3 8 0.13 1 1 0 0
.............CCCGTCGACTTGCTACGGGTC...................................................................................................................................... 21 3 9 0.11 1 1 0 0
..............CCGTCTACTTGCTACTGGGT...................................................................................................................................... 20 3 10 0.10 1 1 0 0
..............CGGTGTACTTGCTACTGGG....................................................................................................................................... 19 3 20 0.10 2 2 0 0
...........................ACGGGATTCGTATTGGCTA.......................................................................................................................... 19 3 20 0.10 2 0 0 2
..............CGGTCGAATTGCTACAGGGT...................................................................................................................................... 20 3 12 0.08 1 1 0 0
......................TTGCTACAGGCTGCGTGTT............................................................................................................................... 19 3 17 0.06 1 1 0 0
......................TTGCTACAGGGTGCGTGTT............................................................................................................................... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:1196522-1196689 + dvi_3362 TTC--CTGGAACGATGGCCA---GCTGAACGATGACCAAAGCACAACCGATACTTGTGAGTA---A-TTATTG-------------------CTG---CAGCAGCCAGAT-TGT---------GTCCTCTTACTGAT----T----------C-C-CAACT-TTC--GACAATTGCAGCTAGTGCCGCGACAGACAGCACCTCGTATCAGAATGGTGGCCACATGC---TG
droMoj3 scaffold_6540:26943130-26943298 + CTC--GTGGAACGAGGGGCA---GCTGAACGACGACCAAAGCACAACAGATACTTGTGAGTG---G-CCCGTGTGCAGC-----------GG-CAACA-----GCTA-AA-TGT---------ACAGCTTAACTAAT----C----------T-C-TATCT-TC---C--GATTGCAGCTAGTGCCGCGACAGACAGCACCTCTTATCAGAATGGCGGCCATATGA---TG
droGri2 scaffold_14624:3781331-3781499 + TTC--CTGGAACGTAGGTGG---GCCGCACGATGACCAAAGCACAACCGATACTTGTAAGTG---A-AATCGTC-----GA--A---T-TC-CA----A------------TCTAA----------A-TCTATTCAATAATTAATTAAT---T-A-TTAAT-TT---G--TTATACAGCAAGTGCCGCCACGGACAGCACCTCGTATCAGAATGGTGGCCATATGT---TT
droWil2 scf2_1100000004902:5910276-5910443 + TTC--CTGGAATGATCAACATCGCATCAATGG------AGATACAACAGATACTTGTAAGTT---T-TCAAAAAA-------TA---T-TT-CAAA-CG-----CA---------AAGCAATTGCAG-ATAACTAACATAAA------A---C-T-CTTTT-TG---G--TATTACAGCAAGTGGTGCCACCGACAGTACCTCCTATCAGAATAA---CAGTATGC---TG
dp5 2:6735139-6735306 - CTC--CTGGGCCGATGGGCA---AATGAATGAGGATCAGAGCATATCCGATACTTGTAAGCA---T-TTCATACACAAT-----------CG-ACAGA-----ACAA-AC-CGAAG----------A-GATACTAATCGGTT----------TTT--CCTT-TT---G--ACTTGCAGCAAGTGGAGCCACAGACAGCACCTCCTATCAGAACGG---ACACATGAT---G
droPer2 scaffold_0:571475-571649 - CTC--CTGGGCCGATGGGCA---AATGAATGAGGATCAGAGCATATCCGATACTTGTAAGCA---T-TTCATACACAAT-----------CG-ACAGA-----ACAA-AC-CGTAG----------A-GATACTAATTGGTTTTCCCTT---T-T-CCCTT-TT---G--ACTTGCAGCAAGTGGAGCCACAGACAGCACCTCCTATCAGAACGG---ACACATGAT---G
droAna3 scaffold_12911:5320347-5320503 + CTC--CTGGGCTGATGCGCA---GAACAACGAGGATCAGGACACAACCGATACTTGTAAGCTATAGAAATT------------A---T-CC-ATT---CAG-----------T----------ATAG-ATTTCTAATCCAAT----------CTT--TGTT---------TTCTGTAGCAAGTGCCCATACGGACAGCACCTCGTACCAAAATGG---CCACATGG---CG
droBip1 scf7180000396583:520273-520429 - CTC--CTGGGCTGATGGGCA---GAACAATGAGGATCAGGACACAACAGATACTTGTAAGATATAGAAACTT-----------A-----GG-ATC---CTG-----------TAAC-------TTAG-CTTACTAATGCAAT----------C-----TTT-AT---G--TTCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAAATGG---C---ATGG---TG
droKik1 scf7180000302388:747063-747235 - CTC--CTGGGGCGATGGGCA---AAACAATGACGATCAGGACACAGACGAAACTTGTAAGTA---A-TCAAAGGA-------TA---T-TC-CCT--CG-----CGA-AC-TGT---------GCAG-CTTACTAAACGGTG------C-CTTTT--TGT--TC--AA--AATTCCAGCAAGTGCCCACACGGACAGCACCTCGTACCAGAATGG---ACACATGCCTAGC
droFic1 scf7180000453826:979445-979613 - TTTCAGTACAACGAAGGGCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGGA---T-ATACTC-----TTGATACTAA-CT-AT--------------AT-TTT----------GGG-TTTGCTAACTGAAT----------TGT-TTTCT-TT--GA--ACCCGTAGCAAGTGCCCATACGGACAGCACCTCTTACCAAAATGG---CCACATAAT---G
droEle1 scf7180000491280:1875043-1875216 + CTC--CTACAACGATACCCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGTA---G-AGCTGGC-----GA------TCTT--CT--TG-----GAC-TCTGGGAC----------A-CATACTAACTGAGT------ACA-C-C-CATCT-TT--AC-CATCTGCAGCAAGTGCCCACACGGACAGCACCTCCTACCAGAATGG---CCACATCATGGGC
droRho1 scf7180000780093:29674-29823 - T--------------ACGCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGTG---A-AACTGGT-----ACAGAGGAG--------------------CT-TCT---------GTGA-TGTGCTAACTGAAT----------CCC--TTTC-TC---A--ATCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAGAATGG---CCACATAAT---G
droBia1 scf7180000302113:1787080-1787248 - CTC--GTATAATGATACGCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGTG---C-ATCCCTC-----GGATAGGAT-TC-CTC---C------------TT----------GCAG-CTAACTAATGGACT------A---C-C-CCTCT-CG---A--TCCTTTAGCAAGTGCCCATACGGACAGCACCTCGTACCAGAATGG---CCACATACTGCAG
droTak1 scf7180000415658:22792-22956 - TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---GAAGCTTGA-----G-TTA---T-AC-CTT---C------------CT----------ATAG-CTTACTAATTCGAA------A---T-C-CTTCTTCC--AA--TCCCTCAGCAAGTGCCCATACGGACAGCACCTCGTACCAGAATGG---CCACATAAT---G
droEug1 scf7180000409555:92086-92247 + TTC--GTACAACGATACGCA---GATGAATGAGGAGCAGGACACAACCGATACTTGTAAGTA---G-ATCTCGT-----AAATA---T-CC-CTT----------------TCT---------GAAGCTTTACTAACCAAAT----------CCT---CTT-CC---C--TCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAAATGG---CCAAATAAT---G
dm3 chr3R:25617393-25617558 + TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---A-AGCTGGC-----ACGAA---T-TG-CT----C------------CGAAT----------G-TCTACTAACTCCCT----------TTTATT----TCATAC--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCACATCATGGCG
droSim2 3r:24971963-24972128 + TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---A-AGCTGGC-----ACGGA---T-TC-CC----A------------CGAAC----------G-CATACTAACTCCCT----------TTTATT----TCATAC--GCCTGTAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCACATCATGGCG
droSec2 scaffold_4:4467922-4468087 + TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---A-AGCTGAA-----ACGGA---T-TC-CC----C------------CGAAC----------G-CCTACTAACTCCCT----------TTTATT----TCATAC--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCACATCATGGTG
droYak3 3R:20850994-20851158 - TTC--GTACAACGATACGCA---GATGAATGAGGAGCAGGACACGACCGATACTTGTAAGTG---G-AGCTGCC-----CCTTT---T-AC-CC----C------------TGAAT----------G-CCTACTAATTTCAT------T---C-C-CTGCT-TT---C--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCAAATCATGGCG
droEre2 scaffold_4820:2385777-2385941 - TTC--ATACAACGATATGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---G-AGCTGGC-----ACTCT---T-AC-CC----C------------TGAAT----------G-CCTACTAACCCCAA------T---C-C-CCTCT-TT---C--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAACTGG---CCACATCATGGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTC--CTGGAACGATGGCCA---GCTGAACGATGACCAAAGCACAACCGATACTTGTGAGTA---A-TTATTG-------------------CTG---CAGCAGCCAGAT-TGT---------GTCCTCTTACTGAT----T----------C-C-CAACT-TTC--GACAATTGCAGCTAGTGCCGCGACAGACAGCACCTCGTATCAGAATGGTGGCCACATGC---TGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......GGAACGATGGCCA---GCTGAAC.........................................................................................................................................................................................................2012.002001000000000000001000000000000000000000000000000000000000000000
.......................GCTGAACGATGACCAAAGCACAACC.......................................................................................................................................................................................2512.002011000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GCCGCGACAGACAGCACCTCGT..........................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................GCTGAACGATGACCAAAGCACA..........................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
...............GGCCA---GCTGAACGATGACCA.................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TAGTGCCGCGACAGACAGCACC..............................2211.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CACCTCGTATCAGAATGGT...............1911.001000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................GCCGCGACAGACAGCACCTCG...........................2111.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AGCACCTCGTATCAGAATGGTGGC............2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................TAGTGCCGCGACAGACAGCACCTC............................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGTGCCGCGACAGACAGCACCTC............................2311.001001000000000000000000000000000000000000000000000000000000000000
.........AACGATGGCCA---GCTGAACGAT......................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
...............................ATGACCAAAGCACAACCGATA...................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................CAGAATGGTGGCCACATGC---T.2011.001001000000000000000000000000000000000000000000000000000000000000
.........AACGATGGCCA---GCTGAACGATGAC...................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
..........................GAACGATGACCAAAGCACAACCGATACT.................................................................................................................................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
TTC--CTGGAACGATGGCCA---GCT.............................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CCGCGACAGACAGCACCTCGT..........................2111.001001000000000000000000000000000000000000000000000000000000000000
..........ACGATGGCCA---GCTGAACGATGACCAAAGCACAACCGATACTT................................................................................................................................................................................4211.001000000000000000000000000000000000000000000000000000000100000000
...................A---GCTGAACGATGACCAAAGCAC...........................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GACAGCACCTCGTATCAGA....................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GACAGACAGCACCTCGTATCAGAAT..................2511.001000000000000000000000000000000000000100000000000000000000000000
................GCCA---GCTGAACGATGACCAAAGCACAACC.......................................................................................................................................................................................2911.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GCCGCGACAGACAGCACCTCGTATCA......................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................T----------C-C-CAACT-TTC--GACAATTGCAG.....................................................2211.001000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................CCGCGACAGACAGCACCTCGTA.........................2211.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................GACAGCACCTCGTATCAGAATGGTGGC............2711.001001000000000000000000000000000000000000000000000000000000000000
.........AACGATGGCCA---GCTGAACGATGACCAAAGCACAACCGATACTT................................................................................................................................................................................4311.001000000000000000000000000000000000000000000000000000001000000000
..........................GAACGATGACCAAAGCACAACC.......................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.................................GACCAAAGCACAACCGATACT.................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................TAGTGCCGCGACAGACAGCACCT.............................2311.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GACAGCACCTCGTATCAGAATGGT...............2411.001000000000000001000000000000000000000000000000000000000000000000
......TGGAACGATGGCCA---GCTGAACG........................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ACAGCACCTCGTATCAGAATGGTGGCCC..........2811.001000000000000000001000000000000000000000000000000000000000000000
.......................GCTGAACGATGACCAAAGCACAACCG......................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................TGAACGATGACCAAAGCACAACCGATAC..................................................................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................CCTCGTATCAGAATGGTGGCCA..........2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................G---CAGCAGCCAGAT-TGT---------GTCCTCTT....................................................................................................2411.001000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................GCCGCGACAGACAGCACCTC............................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................T----T----------C-C-CAACT-TTC--GACAATTGCAG.....................................................2311.001000000000000000000000000010000000000000000000000000000000000000
...................A---GCTGAACGATGACCAAAGCACAAC........................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CTCGTATCAGAATGGTGGC............1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTC--GTGGAACGAGGGGCA---GCTGAACGACGACCAAAGCACAACAGATACTTGTGAGTG---G-CCCGTGTGCAGC-----------GG-CAACA-----GCTA-AA-TGT---------ACAGCTTAACTAAT----C----------T-C-TATCT-TC---C--GATTGCAGCTAGTGCCGCGACAGACAGCACCTCTTATCAGAATGGCGGCCATATGA---TGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................AGCACCTCTTATCAGAATGGCGGCC...........2511.001100000
............................................................................................................................................................................................GACAGACAGCACCTCTTATCAGAATGGC...............2811.001000010
........GAACGAGGGGCA---GCTGAACGA.......................................................................................................................................................................................................2111.001000001
........GAACGAGGGGCA---GCTGAACG........................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................CAGAATGGCGGCCATATGA---TG2111.001100000
....................................................................................................................................................................................................GCACCTCTTATCAGAATGGCGGC............2311.001000001
......TGGAACGAGGGGCA---GCTGAACG........................................................................................................................................................................................................2211.001100000
..............................GACGACCAAAGCACAACAG......................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................CGCGACAGACAGCACCTCTT..........................2011.001100000
.......................................................GTGAGTG---G-CCCGTGTGCAGC-----------GG-CAAC......................................................................................................................................2611.001000001
droGri2
TTC--CTGGAACGTAGGTGG---GCCGCACGATGACCAAAGCACAACCGATACTTGTAAGTG---A-AATCGTC-----GA--A---T-TC-CA----A------------TCTAA----------A-TCTATTCAATAATTAATTAAT---T-A-TTAAT-TT---G--TTATACAGCAAGTGCCGCCACGGACAGCACCTCGTATCAGAATGGTGGCCATATGT---TTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................ACGATGACCAAAGCACAACCGATA...................................................................................................................................................................................2411.00110
droWil2
TTC--CTGGAATGATCAACATCGCATCAATGG------AGATACAACAGATACTTGTAAGTT---T-TCAAAAAA-------TA---T-TT-CAAA-CG-----CA---------AAGCAATTGCAG-ATAACTAACATAAA------A---C-T-CTTTT-TG---G--TATTACAGCAAGTGGTGCCACCGACAGTACCTCCTATCAGAATAA---CAGTATGC---TGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............CAACATCGCATCAATGG------AGATA............................................................................................................................................................................................2212.00200200
...........................AATGG------AGATACAACAGAT....................................................................................................................................................................................1811.00100100
............GATCAACATCGCATCAATGG------AGAT.............................................................................................................................................................................................2411.00101000
.TC--CTGGAATGATCAACATCGCATC............................................................................................................................................................................................................2411.00100100
............GATCAACATCGCATCAATGG------AGA..............................................................................................................................................................................................2311.00100100
....................TCGCATCAATGG------AGATACAACAGATACTT................................................................................................................................................................................2911.00110000
..................CATCGCATCAATGG------AGATACA..........................................................................................................................................................................................2111.00100100
..........................................................................................................................................................................................................CCTATCAGAATAA---CAGTATGC---T.2211.00100010
..............TCAACATCGCATCAATGG------AG...............................................................................................................................................................................................2011.00100100
................................................................................................................................................................................................GACAGTACCTCCTATCAGA....................1911.00101000
....................TCGCATCAATGG------AGATACAACAGA.....................................................................................................................................................................................2411.00100001
dp5
CTC--CTGGGCCGATGGGCA---AATGAATGAGGATCAGAGCATATCCGATACTTGTAAGCA---T-TTCATACACAAT-----------CG-ACAGA-----ACAA-AC-CGAAG----------A-GATACTAATCGGTT----------TTT--CCTT-TT---G--ACTTGCAGCAAGTGGAGCCACAGACAGCACCTCCTATCAGAACGG---ACACATGAT---GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........CGATGGGCA---AATGAATGAGG.....................................................................................................................................................................................................2014.0040300000001
...........CGATGGGCA---AATGAATGAGGAT...................................................................................................................................................................................................2212.0020100000001
...................A---AATGAATGAGGATCAGAGCAT...........................................................................................................................................................................................2212.0020200000000
............GATGGGCA---AATGAATGAGGATCAGAGC.............................................................................................................................................................................................2712.0020100000001
...................................................................................................................................................................................................AGCACCTCCTATCAGAACGG---ACACATG......2711.0010100000000
CTC--CTGGGCCGATGGGCA---AAT.............................................................................................................................................................................................................2111.0010000100000
CTC--CTGGGCCGATGGGCA---................................................................................................................................................................................................................1811.0010100000000
.....CTGGGCCGATGGGCA---AATGAATGAGGA....................................................................................................................................................................................................2711.0010010000000
.................................................................................................................................................................................................ACAGCACCTCCTATCAGAA...................1911.0010001000000
..C--CTGGGCCGATGGGCA---AATGAATGAGG.....................................................................................................................................................................................................2711.0010000100000
...................A---AATGAATGAGGATCAGAGC.............................................................................................................................................................................................2011.0010100000000
............GATGGGCA---AATGAATGAGG.....................................................................................................................................................................................................1911.0010100000000
............GATGGGCA---AATGAATGAGGATCA.................................................................................................................................................................................................2311.0010000100000
.................GCA---AATGAATGAGGATCAGAGCAT...........................................................................................................................................................................................2411.0010000100000
...............GGGCA---AATGAATGAGGATCAGAGC.............................................................................................................................................................................................2411.0010000001000
.......GGGCCGATGGGCA---AATGAATGAGGAT...................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................CAGACAGCACCTCCTATCAGAACG.................2411.0010100000000
..................................................................................................................................................................................CAAGTGGAGCCACAGACAG..................................1911.0010100000000
.................................................................................................................................................................................................ACAGCACCTCCTATCAGAACGG---AC...........2411.0010100000000
.......................AATGAATGAGGATCAGAGCA............................................................................................................................................................................................2011.0010100000000
........................ATGAATGAGGATCAGAGC.............................................................................................................................................................................................1811.0010100000000
.......................AATGAATGAGGATCAGAGC.............................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................CAGCACCTCCTATCAGAACGG---AC...........2311.0010100000000
.............ATGGGCA---AATGAATGAGGAT...................................................................................................................................................................................................2011.0010100000000
........GGCCGATGGGCA---AATGAATGAGG.....................................................................................................................................................................................................2311.0010100000000
droPer2
CTC--CTGGGCCGATGGGCA---AATGAATGAGGATCAGAGCATATCCGATACTTGTAAGCA---T-TTCATACACAAT-----------CG-ACAGA-----ACAA-AC-CGTAG----------A-GATACTAATTGGTTTTCCCTT---T-T-CCCTT-TT---G--ACTTGCAGCAAGTGGAGCCACAGACAGCACCTCCTATCAGAACGG---ACACATGAT---GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................GGCA---AATGAATGAGGATCAGAG..............................................................................................................................................................................................2212.002000002
...................A---AATGAATGAGGATCAGAGC.............................................................................................................................................................................................2012.002110000
...........CGATGGGCA---AATGAATGAGG.....................................................................................................................................................................................................2012.002010001
.................................................................................................................................................CCTT---T-T-CCCTT-TT---G--ACTTGCAG.....................................................2211.001010000
............GATGGGCA---AATGAATGAGGA....................................................................................................................................................................................................2011.001000001
..C--CTGGGCCGATGGGCA---AATGAATGAGG.....................................................................................................................................................................................................2711.001000001
............................ATGAGGATCAGAGCATATC........................................................................................................................................................................................1911.001010000
..................................................................................................................................................................................................CAGCACCTCCTATCAGAAC..................1911.001000010
...........CGATGGGCA---AATGAATGAGGAT...................................................................................................................................................................................................2211.001000001
...............................................................................................................................................................................................................CAGAACGG---ACACATGAT---G1811.001100000
...................A---AATGAATGAGGATCAGAGCAT...........................................................................................................................................................................................2211.001010000
.................................GATCAGAGCATATCCGATACT.................................................................................................................................................................................2111.001010000
.........................TGAATGAGGATCAGAGCATAAAA.......................................................................................................................................................................................2320.501010000
droAna3
CTC--CTGGGCTGATGCGCA---GAACAACGAGGATCAGGACACAACCGATACTTGTAAGCTATAGAAATT------------A---T-CC-ATT---CAG-----------T----------ATAG-ATTTCTAATCCAAT----------CTT--TGTT---------TTCTGTAGCAAGTGCCCATACGGACAGCACCTCGTACCAAAATGG---CCACATGG---CGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................GAACAACGAGGATCAGGACACA..........................................................................................................................................................................................2212.002000002
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCGTACC.......................2512.002000002
.........................ACAACGAGGATCAGGACACAACC.......................................................................................................................................................................................2312.002000002
.....................................................................................................................................................................................GTGCCCATACGGACAGCACCT.............................2111.001010000
.........GCTGATGCGCA---GAACAACGAGG.....................................................................................................................................................................................................2211.001000001
.......................GAACAACGAGGATCAGGA..............................................................................................................................................................................................1811.001100000
............GATGCGCA---GAACAACGAG......................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................CTCGTACCAAAATGG---CCACATGG---CG2511.001010000
..............TGCGCA---GAACAACGAGGATCA.................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................TAGCAAGTGCCCATACGGACA...................................2111.001000001
..................................................................................................................................................................................CAAGTGCCCATACGGACAGCACCTC............................2511.001010000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCG...........................2111.001000010
..............................GAGGATCAGGACACAACCGAT....................................................................................................................................................................................2111.001000001
.......................GAACAACGAGGATCAGGACACAACC.......................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................ATACGGACAGCACCTCGTACCA......................2211.001010000
droBip1
CTC--CTGGGCTGATGGGCA---GAACAATGAGGATCAGGACACAACAGATACTTGTAAGATATAGAAACTT-----------A-----GG-ATC---CTG-----------TAAC-------TTAG-CTTACTAATGCAAT----------C-----TTT-AT---G--TTCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAAATGG---C---ATGG---TGSizeHit CountTotal NormTotal
No Reads
droKik1
CTC--CTGGGGCGATGGGCA---AAACAATGACGATCAGGACACAGACGAAACTTGTAAGTA---A-TCAAAGGA-------TA---T-TC-CCT--CG-----CGA-AC-TGT---------GCAG-CTTACTAAACGGTG------C-CTTTT--TGT--TC--AA--AATTCCAGCAAGTGCCCACACGGACAGCACCTCGTACCAGAATGG---ACACATGCCTAGCSizeHit CountTotal NormTotal
No Reads
droFic1
TTTCAGTACAACGAAGGGCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGGA---T-ATACTC-----TTGATACTAA-CT-AT--------------AT-TTT----------GGG-TTTGCTAACTGAAT----------TGT-TTTCT-TT--GA--ACCCGTAGCAAGTGCCCATACGGACAGCACCTCTTACCAAAATGG---CCACATAAT---GSizeHit CountTotal NormTotal
No Reads
droEle1
CTC--CTACAACGATACCCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGTA---G-AGCTGGC-----GA------TCTT--CT--TG-----GAC-TCTGGGAC----------A-CATACTAACTGAGT------ACA-C-C-CATCT-TT--AC-CATCTGCAGCAAGTGCCCACACGGACAGCACCTCCTACCAGAATGG---CCACATCATGGGCSizeHit CountTotal NormTotal
No Reads
droRho1
T--------------ACGCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGTG---A-AACTGGT-----ACAGAGGAG--------------------CT-TCT---------GTGA-TGTGCTAACTGAAT----------CCC--TTTC-TC---A--ATCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAGAATGG---CCACATAAT---GSizeHit CountTotal NormTotal
No Reads
droBia1
CTC--GTATAATGATACGCA---GATGAACGAGGAGCAGGACACAACCGATACTTGTAAGTG---C-ATCCCTC-----GGATAGGAT-TC-CTC---C------------TT----------GCAG-CTAACTAATGGACT------A---C-C-CCTCT-CG---A--TCCTTTAGCAAGTGCCCATACGGACAGCACCTCGTACCAGAATGG---CCACATACTGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---GAAGCTTGA-----G-TTA---T-AC-CTT---C------------CT----------ATAG-CTTACTAATTCGAA------A---T-C-CTTCTTCC--AA--TCCCTCAGCAAGTGCCCATACGGACAGCACCTCGTACCAGAATGG---CCACATAAT---GSizeHit CountTotal NormTotal
No Reads
droEug1
TTC--GTACAACGATACGCA---GATGAATGAGGAGCAGGACACAACCGATACTTGTAAGTA---G-ATCTCGT-----AAATA---T-CC-CTT----------------TCT---------GAAGCTTTACTAACCAAAT----------CCT---CTT-CC---C--TCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAAATGG---CCAAATAAT---GSizeHit CountTotal NormTotal
No Reads
dm3
TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---A-AGCTGGC-----ACGAA---T-TG-CT----C------------CGAAT----------G-TCTACTAACTCCCT----------TTTATT----TCATAC--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCACATCATGGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................ACGAGGAGCAGGACACGACCGATACTT................................................................................................................................................................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000031100
.......................GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................ATACGGACAGCACCTCGTACC.......................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
......TACAACGATACGCA---GATGAACGAGGA....................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCGTACC.......................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................A---GATGAACGAGGAGCAGG...............................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000
..........................GAACGAGGAGCAGGACACGACCGATAC..................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATACGCA---GATGAACGAGG.....................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000
....................................................................................................................................................................................................GCACCTCGTACCAAGCTGG---C............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000
........................ATGAACGAGGAGCAGGAC.............................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000
.......ACAACGATACGCA---GATGAACG........................................................................................................................................................................................................2112.0020000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAACGATACGCA---GATGAACGA.......................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AGCACCTCGTACCAAGCTGG---C............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................A---GATGAACGAGGAGCAGGACACGAC........................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000
....................................................................................................................................................................................................GCACCTCGTACCAAGCTGG---CCA..........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........ACGATACGCA---GATGAACGA.......................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
.......................GATGAACGAGGAGCAGGACAC...........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................GAGGAGCAGGACACGACC.......................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TACGGACAGCACCTCGTACCA......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACAACGATACGCA---GATGAACGAGGA....................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000
.TC--GTACAACGATACGCA---GATGAACGAGGA....................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAGGAGCAGGACACGACCGATAC..................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TACGGACAGCACCTCGTACC.......................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTACAACGATACGCA---GATGAACGA.......................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................A---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................GATGAACGAGGAGCAGGAC.............................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000
..........................................................................................................................................................................................CATACGGACAGCACCTCGTACCAAGCT..................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000
.........................TGAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........ACGATACGCA---GATGAACGAGGAGC..................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000
.................GCA---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................AACGAGGAGCAGGACACG..........................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTC............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................................................................................................................................................................CAGCACCTCGTACCAAGCTGG---CCACAT.......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TTTATT----TCATAC--GCCTGCAGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAACGAGGAGCAGGACACGA.........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAACGATACGCA---GATGAAC.........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................TTTATT----TCATAC--GCCTGCAG.....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAACGAGGAGCAGGACACGACCGAT....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CCCATACGGACAGCACCTCGT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATGAACGAGGAGCAGGACACGA.........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................ATACGGACAGCACCTCGTACCA......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATACGCA---GATGAACGAGGAGC..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............TACGCA---GATGAACGAGGAGCAGGA..............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................ACGAGGAGCAGGACACGACCG......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GATACGCA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................GCA---GATGAACGAGGAGCAG................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..C--GTACAACGATACGCA---GATGA...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AACGAGGAGCAGGACACGACCGATA...................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................GTACCAAGCTGG---CCACATCAT....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GACAGCACCTCGTACCAAGC...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................ATACGGACAGCACCTCGTA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................A---GATGAACGAGGAGCAGGA..............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAGCACCTCGTACCAAGCT..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GCACCTCGTACCAAGCTGG---CCACA........2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......TACAACGATACGCA---GATGAACGAGT.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCGT..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................CCATACGGACAGCACCTCGTACC.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAACGAGGAGCAGGACACGACCGA.....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AACGATACGCA---GATGAACGAGGA....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
TTC--GTACAACGATACGCA---GAT.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........CAACGATACGCA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATGAACGAGGAGCAGGACACGAC........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............TACGCA---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................ACCTCGTACCAAGCTGG---CCA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TATT----TCATAC--GCCTGCAG.....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGAGCAGGACACGACCGATA...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................CA---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................CCCATACGGACAGCACCTCGTAC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................CGCA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGAACGAGGAGCAGGACA............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................GCACCTCGTACCAAGCTGG---CCAC.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AGCACCTCGTACCAAGCTGG---CCACA........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GATACGCA---GATGAACGAGG.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............GATACGCA---GATGAACGAGGAGCG.................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................A---GATGAACGAGGAGCAGGACC............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................CA---GATGAACGAGGAGCAGGACACGAC........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................ACGGACAGCACCTCGTACC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACGAGGAGCAGGACACGACCGATACT.................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................ACTAACTCCCT----------TTTATT----TCA..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TACGGACAGCACCTCGTAC........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAGCACCTCGTACCAAGCTGG---CCACATC......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GGACAGCACCTCGTACCA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................A---GATGAACGAGGAGCAGGACAC...........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................ACGGACAGCACCTCGTACCA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCGTAC........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................A---GATGAACGAGGAGCAGGACACG..........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................TACGGACAGCACCTCGTACCAAGCTGG---C............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AACGATACGCA---GATGAACGAGG.....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CACCTCGTACCAAGCTGG---CC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................GGAGCAGGACACGACCGAT....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATGAACGAGGAGCAGGACACGACCG......................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................AGGAGCAGGACACGACCG......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..........................GAACGAGGAGCAGGACACGAC........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATACGCA---GATGAACGAGGA....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......ACAACGATACGCA---GATGAACGAGGAG...................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CATACGGACAGCACCTCGTACCAA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............GATACGCA---GATGAACGAGGA....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................AGGACACGACCGATACTT................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGAGGAGCAGGACACGACCGATACTT................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................CAAGCTGG---CCACATCATGGC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................TCGTACCAAGCTGG---CCACA........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................AGCACCTCGTACCAAGCT..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATGAACGAGGAGCAGGA..............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........CAACGATACGCA---GATGAACGAGG.....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................TGAACGAGGAGCAGGACACGACCGA.....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AACGAGGAGCAGGACACGACCGA.....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................AACGAGGAGCAGGACACGAC........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................T----C------------CGAAT----------G-TCTACTAACTCCCT----------TTT............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATACGCA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGTGCCCATACGGACAGCACCT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................CATACGGACAGCACCTCGT..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................TCGTACCAAGCTGG---CCACATC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AACGAGGAGCAGGACACGACCGATACTT................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................GAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACGCA---GATGAACGAGGAGCAG................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAACGAGGAGCAGGACACGACCGATA...................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............ACGCA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................CAGGACACGACCGATACTTG...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGTGCCCATACGGACAGCACC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGCA---GATGAACGAGGAGCAGGAC.............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................ACAGCACCTCGTACCAAGCTGG---CC...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACAACGATACGCA---GATGAACGAGGAGC..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................ACCTCGTACCAAGCTGG---CC...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................CGCA---GATGAACGAGGAGCA.................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTACAACGATACGCA---GATGAACG........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................CAGGACACGACCGATACT.................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................T----------TTTATT----TCATAC--GCCTGCAG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CAGGACACGACCGATACTT................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.............................CGAGGAGCAGGACACGAC........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AAGCTGG---CCACATCATGGCG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............ACGCA---GATGAACGAGGAGC..................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................CCATACGGACAGCACCTCG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............ATACGCA---GATGAACGAGGAG...................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---A-AGCTGGC-----ACGGA---T-TC-CC----A------------CGAAC----------G-CATACTAACTCCCT----------TTTATT----TCATAC--GCCTGTAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCACATCATGGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................CATACGGACAGCACCTCGTACC.......................2212.00201100000000000000
...................A---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2112.00200000000000002000
.........................TGAACGAGGAGCAGGACACGACCGATAC..................................................................................................................................................................................2811.00100000000000001000
.....................................AGGACACGACCGATACTT................................................................................................................................................................................1811.00110000000000000000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTC............................2011.00101000000000000000
..........................................................................................................................................................................................CATACGGACAGCACCTCGTACCAAGCC..................2711.00100100000000000000
.................GCA---GATGAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2811.00100000000000001000
...................................................................................................................................................................CATAC--GCCTGTAGCAAGG................................................1811.00100100000000000000
..............TACGCA---GATGAACGAGGAGCAGGACACG..........................................................................................................................................................................................2811.00100000001000000000
...................A---GATGAACGAGGAGCAGG...............................................................................................................................................................................................1811.00100000000000100000
...............ACGCA---GATGAACGAGGAG...................................................................................................................................................................................................1811.00100000000000100000
.......................GATGAACGAGGAGCAGGACACGACCGATA...................................................................................................................................................................................2911.00100000000000001000
droSec2
TTC--GTACAACGATACGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---A-AGCTGAA-----ACGGA---T-TC-CC----C------------CGAAC----------G-CCTACTAACTCCCT----------TTTATT----TCATAC--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCACATCATGGTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............ATACGCA---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2711.0010100
.......ACAACGATACGCA---GATGAACGAGG.....................................................................................................................................................................................................2411.0010010
........................ATGAACGAGGAGCAGGACA............................................................................................................................................................................................1911.0010100
..........................GAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2211.0011000
.................GCA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................2011.0011000
.........AACGATACGCA---GATGAACGAG......................................................................................................................................................................................................2111.0010001
.......................................................................................................................................................................................GCCCATACGGACAGCACCTC............................2011.0010010
..........................GAACGAGGAGCAGGACACGACCG......................................................................................................................................................................................2311.0010100
.......................GATGAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2511.0010100
.......................GATGAACGAGGAGCAGGACACGAC........................................................................................................................................................................................2411.0011000
......TACAACGATACGCA---GATGAACGAGG.....................................................................................................................................................................................................2511.0011000
droYak3
TTC--GTACAACGATACGCA---GATGAATGAGGAGCAGGACACGACCGATACTTGTAAGTG---G-AGCTGCC-----CCTTT---T-AC-CC----C------------TGAAT----------G-CCTACTAATTTCAT------T---C-C-CTGCT-TT---C--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG---CCAAATCATGGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............ATACGCA---GATGAATGAGGA....................................................................................................................................................................................................1912.00201000010000
.....GTACAACGATACGCA---GATGAATGA.......................................................................................................................................................................................................2411.00101000000000
................................GGAGCAGGACACGACCGATACTTCA..............................................................................................................................................................................2511.00101000000000
...........................................................................................................................................................................................ATACGGACAGCACCTCGTACCA......................2211.00100000010000
................CGCA---GATGAATGAGGAGCAGG...............................................................................................................................................................................................2111.00101000000000
.............ATACGCA---GATGAATGAGGAGCAGGAC.............................................................................................................................................................................................2611.00100000010000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCGTACCA......................2611.00101000000000
...................A---GATGAATGAGGAGCAGGACA............................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................................ATACGGACAGCACCTCGTACC.......................2111.00100000010000
...........................AATGAGGAGCAGGACACGAC........................................................................................................................................................................................2011.00100000010000
.......................GATGAATGAGGAGCAGGA..............................................................................................................................................................................................1811.00100000100000
...........................................................................................................................................................................................ATACGGACAGCACCTCGTACCAAGC...................2511.00100000010000
............................ATGAGGAGCAGGACACGACC.......................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................CAGCACCTCGTACCAAGCTG.................2011.00101000000000
.....GTACAACGATACGCA---GATGAATGAGG.....................................................................................................................................................................................................2611.00100000010000
.......................GATGAATGAGGAGCAGGACACGACCGA.....................................................................................................................................................................................2711.00100010000000
...................A---GATGAATGAGGAGCAGGACACGAC........................................................................................................................................................................................2511.00100000010000
...................A---GATGAATGAGGAGCAGGAC.............................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................GTACCAAGCTGG---CCAAATCATG...2211.00101000000000
.......................GATGAATGAGGAGCAGGACACGACC.......................................................................................................................................................................................2511.00100000010000
.......................GATGAATGAGGAGCAGGACA............................................................................................................................................................................................2011.00101000000000
.......................GATGAATGAGGAGCAGGACAC...........................................................................................................................................................................................2111.00101000000000
...........................AATGAGGAGCAGGACACGACC.......................................................................................................................................................................................2111.00100000010000
droEre2
TTC--ATACAACGATATGCA---GATGAACGAGGAGCAGGACACGACCGATACTTGTAAGTG---G-AGCTGGC-----ACTCT---T-AC-CC----C------------TGAAT----------G-CCTACTAACCCCAA------T---C-C-CCTCT-TT---C--GCCTGCAGCAAGTGCCCATACGGACAGCACCTCGTACCAAACTGG---CCACATCATGGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....ATACAACGATATGCA---GATGAACGAGG.....................................................................................................................................................................................................2613.0030000300
.....ATACAACGATATGCA---GATG............................................................................................................................................................................................................1912.0020100010
.......................GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2012.0021000100
..........................GAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2212.0020000200
.................GCA---GATGAACGAGGAGCA.................................................................................................................................................................................................1812.0020000200
...............................................................................................................................................................................................GGACAGCACCTCGTACCAAAC...................2111.0010100000
..........................................................................................................................................................................................CATACGGACAGCACCTCGT..........................1911.0010000100
.................GCA---GATGAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2811.0010000100
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCG...........................2111.0010000100
...................A---GATGAACGAGGAGCAGGA..............................................................................................................................................................................................1911.0010000100
............GATATGCA---GATGAACGAGGA....................................................................................................................................................................................................2011.0010000100
..................CA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................1911.0011000000
.................GCA---GATGAACGAGGAGCAGG...............................................................................................................................................................................................2011.0010000010
..............................GAGGAGCAGGACACGACC.......................................................................................................................................................................................1811.0011000000
.....ATACAACGATATGCA---GAT.............................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................GTACCAAACTGG---CCACATCATGGCG2511.0011000000
.......................................................................................................................................................................................GCCCATACGGACAGCACCT.............................1911.0011000000
...................A---GATGAACGAGGAGCAGGAC.............................................................................................................................................................................................2011.0010000100
...................A---GATGAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2611.0011000000
.......ACAACGATATGCA---GATGA...........................................................................................................................................................................................................1811.0010001000
..........................GAACGAGGAGCAGGACAC...........................................................................................................................................................................................1811.0010000010
......................................................................................................................................................................................TGCCCATACGGACAGCACCT.............................2011.0011000000
...............ATGCA---GATGAACGAGGAGCAG................................................................................................................................................................................................2111.0010000010
.............ATATGCA---GATGAACGAGGA....................................................................................................................................................................................................1911.0010000100
................TGCA---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2411.0011000000
.......................GATGAACGAGGAGCAGGACACGACC.......................................................................................................................................................................................2511.0010000100
.....................................................................................................................................................................................GTGCCCATACGGACAGCACCTCGTACC.......................2711.0011000000
.......................................................................................................................................................................................GCCCATACGGACAGCACCTCGTACCAAA....................2811.0011000000
..........ACGATATGCA---GATGAACGAGGAGCA.................................................................................................................................................................................................2511.0010000100
.....ATACAACGATATGCA---GATGAACGAG......................................................................................................................................................................................................2511.0010000100
...................A---GATGAACGAGGAGCAGGACACGACCGA.....................................................................................................................................................................................2811.0010000100
.....ATACAACGATATGCA---GATGAA..........................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................CCCATACGGACAGCACCTCGTA.........................2211.0010000100
...................A---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2111.0010000100
.........AACGATATGCA---GATGAACGAGGAGCA.................................................................................................................................................................................................2611.0010000100
............................................................................................................................................................................................TACGGACAGCACCTCGTACC.......................2011.0010010000
..........................GAACGAGGAGCAGGACACGACCGATA...................................................................................................................................................................................2611.0010000100
..........................................................................................................................................................................................................CGTACCAAACTGG---CCACATCATGGCG2611.0011000000
.............ATATGCA---GATGAACGAGGAGCAGGACA............................................................................................................................................................................................2711.0010000100
.............ATATGCA---GATGAACGAGGAGCA.................................................................................................................................................................................................2211.0010000100
.......................................................................................................................................................................................GCCCATACGGACAGCACCTC............................2011.0011000000

Generated: 05/16/2015 at 11:34 PM