ID:

dvi_3261

 Coordinate:

scaffold_12855:244475-244625 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.5 -10.9 -10.8 -10.7

Flybase annnotation

CDS [Dvir\GJ10595-cds]; exon [dvir_GLEANR_10508:1]; intron [Dvir\GJ10595-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1_DVirRCHelitron+
mature
  1. scaffold_179:724-749 +
  2. scaffold_12514:42131-42156 +
  3. scaffold_12723:471114-471139 +
  4. scaffold_12735:125122-125147 +
  5. scaffold_12855:6844308-6844333 +
  6. scaffold_12875:2021005-2021030 +
  7. scaffold_12875:12430227-12430252 +
  8. scaffold_12954:494010-494035 +
  9. scaffold_12958:1212269-1212294 +
  10. scaffold_12958:1988978-1989003 +
  11. scaffold_12958:2101517-2101542 +
  12. scaffold_12958:3432677-3432702 +
  13. scaffold_13042:5159818-5159843 +
  14. scaffold_13047:3187550-3187575 +
  15. scaffold_13049:24432321-24432346 +
  16. scaffold_13050:1049877-1049902 +
  17. scaffold_13052:1031577-1031602 +
  18. scaffold_13052:1572073-1572098 +
  19. scaffold_13246:2358067-2358092 +
  20. scaffold_13324:1863631-1863656 +
  21. scaffold_12723:32398-32423 +
  22. scaffold_12723:1403140-1403165 +
  23. scaffold_12726:425941-425966 +
  24. scaffold_12726:1156019-1156044 +
  25. scaffold_12736:225-250 +
  26. scaffold_12822:940136-940161 +
  27. scaffold_12822:3366163-3366188 +
  28. scaffold_12855:790378-790403 +
  29. scaffold_12855:9259755-9259780 +
  30. scaffold_12875:5315250-5315275 +
  31. scaffold_12958:891385-891410 +
  32. scaffold_12963:5842341-5842366 +
  33. scaffold_12970:1417659-1417684 +
  34. scaffold_12970:2877878-2877903 +
  35. scaffold_13042:4029365-4029390 +
  36. scaffold_13047:15956917-15956942 +
  37. scaffold_13049:9251326-9251351 +
  38. scaffold_13050:1699194-1699219 +
  39. scaffold_13052:762592-762617 +
  40. scaffold_6681:997-1022 +
  41. scaffold_12723:334105-334130 +
  42. scaffold_12823:735415-735440 +
  43. scaffold_12855:9412902-9412927 +
  44. scaffold_12958:274465-274490 +
  45. scaffold_12958:284008-284033 +
  46. scaffold_12958:3015238-3015263 +
  47. scaffold_12970:691795-691820 +
  48. scaffold_13049:25222010-25222035 +
  49. scaffold_13050:1624070-1624095 +
  50. scaffold_9727:3110-3135 -
  51. scaffold_12728:241579-241604 -
  52. scaffold_12728:651033-651058 -
  53. scaffold_12736:305074-305099 -
  54. scaffold_12799:33630-33655 -
  55. scaffold_12799:90909-90934 -
  56. scaffold_12805:34885-34910 -
  57. scaffold_12822:96464-96489 -
  58. scaffold_12855:9264017-9264042 -
  59. scaffold_12891:30633-30658 -
  60. scaffold_12954:1312658-1312683 -
  61. scaffold_12967:626858-626883 -
  62. scaffold_13036:672062-672087 -
  63. scaffold_13047:351930-351955 -
  64. scaffold_13049:24591326-24591351 -
  65. scaffold_13049:24987236-24987261 -
  66. scaffold_13049:25132360-25132385 -
  67. scaffold_13050:621482-621507 -
  68. scaffold_13052:942031-942056 -
  69. scaffold_13534:14751-14776 -
  70. scaffold_12875:3608217-3608242 -
  71. scaffold_12936:506102-506127 -
  72. scaffold_12941:154577-154602 -
  73. scaffold_12970:392098-392123 -
  74. scaffold_13045:303637-303662 -
  75. scaffold_13049:22764440-22764465 -
  76. scaffold_13049:25216571-25216596 -
  77. scaffold_13050:2159383-2159408 -
  78. scaffold_13324:1552125-1552150 -
  79. scaffold_10324:324853-324878 +
  80. scaffold_10592:1204-1229 +
  81. scaffold_12723:753340-753365 +
  82. dvi_3261  scaffold_12855:244527-244552 +
  83. scaffold_12855:254116-254141 +
  84. scaffold_12855:3662064-3662089 +
  85. scaffold_12855:9810931-9810956 +
  86. scaffold_12875:2871938-2871963 +
  87. scaffold_12958:988498-988523 +
  88. scaffold_12963:2107124-2107149 +
  89. scaffold_12963:20191777-20191802 +
  90. scaffold_13052:1201949-1201974 +
  91. scaffold_12954:1448667-1448692 +
  92. scaffold_13156:5810-5835 +
  93. scaffold_13348:19404-19429 +
  94. scaffold_12723:735570-735595 -
  95. scaffold_12728:339322-339347 -
  96. scaffold_12790:287087-287112 -
  97. scaffold_12847:157586-157611 -
  98. scaffold_12855:7036659-7036684 -
  99. scaffold_12958:760088-760113 -
  100. scaffold_12970:1084676-1084701 -
  101. scaffold_12970:8397208-8397233 -
  102. scaffold_13047:1664201-1664226 -
  103. dvi_15872  scaffold_13047:7620111-7620136 -
  104. scaffold_13050:534477-534502 -
  105. scaffold_13050:1139708-1139733 -
  106. scaffold_13050:1150725-1150750 -
  107. scaffold_12192:258-283 -
  108. scaffold_12728:269775-269800 -
  109. scaffold_12728:620533-620558 -
  110. scaffold_12734:481543-481568 -
  111. scaffold_12799:508695-508720 -
  112. scaffold_12855:569057-569082 -
  113. scaffold_12855:9684117-9684142 -
  114. scaffold_12958:1948471-1948496 -
  115. scaffold_12970:5117714-5117739 -
  116. scaffold_12970:6885105-6885130 -
  117. scaffold_12970:7931876-7931901 -
  118. scaffold_13047:2888579-2888604 -
  119. scaffold_13047:19096494-19096519 -
  120. dvi_24260  scaffold_13049:23629457-23629482 -
  121. scaffold_13050:628067-628092 -
  122. scaffold_13050:1136958-1136983 -
  123. scaffold_13324:1928588-1928613 -
  124. scaffold_13324:2413119-2413144 -
star
  1. scaffold_9268:162-187 -
  2. scaffold_9269:671-696 +
  3. scaffold_12735:242813-242838 +
  4. scaffold_12790:175698-175723 -
  5. dvi_3261  scaffold_12855:244579-244604 +
  6. scaffold_12855:9132767-9132792 -
  7. scaffold_12958:1737151-1737176 +
  8. scaffold_13042:3065338-3065363 -
  9. scaffold_13047:2949038-2949063 +

Sense Strand Reads

-------------------------------------#############---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TATTTTTTTCAGAATTTTTCTATTGAAAATTAGTGAAATGACTGGATCAGGTGAATATATGCATTATTAGTATTAAGAGAATGTTTGGATATAAAGTGTTTGTGCAAATGTATGTAACAGGCAGAAGGAAGTATCGCCCACCCCAAAAATTACATATATTTTTGATCAGCATCAACAGCCGGGTCAATCTAGCCATGTCCGTCTGTCTGTCCGTCTTTCTGTCCTTCCGTATGTATGAATGCAAGGATCCT
******************************************************************************************************.................(((.....((.((...........(((((((.......)))))))....)).))....)))*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060655
9x160_testes_total
 SRR060659
Argentina_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 V116
male body		 M027
male body		 SRR060675
140x9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060681
Argx9_testes_total
 M047
female body
 SRR060678
9x140_testes_total
 SRR060673
9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 GSM1528803
follicle cells		 SRR060657
140_testes_total
 SRR060679
140x9_testes_total
 SRR060654
160x9_ovaries_total
 SRR060658
140_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060683
160_testes_total
 V047
embryo
...........................AATTAGTGAAATGACTGGATCAGTACA..................................................................................................................................................................................................... 27 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GATATAGAGTGTTTGTACA................................................................................................................................................. 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AAATTAGTGAAATGACTGG.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................AATGACTGGATCAGGTGAAT................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................ATTAGTGAAATGACTGGAT............................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCAGAAGG........................................................................................................................... 26 0 20 0.80 16 0 0 0 0 0 0 0 0 7 0 2 5 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCAGA.............................................................................................................................. 23 0 20 0.55 11 0 0 0 0 0 4 0 0 0 2 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................GATATTGAGTGTTTGTGCA................................................................................................................................................. 19 2 4 0.50 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCTGTCCTTCCGTATGTATGG............. 21 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCAGAAG............................................................................................................................ 25 0 20 0.30 6 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................GTATGTAACAGGCAGAAGGAA......................................................................................................................... 21 0 20 0.20 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCAGAAGGA.......................................................................................................................... 27 0 20 0.15 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................GAAATGACTGAATCTGGT....................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TATATTTTTGATCAGCATCAACAGCC....................................................................... 26 0 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATGTAACAGGCAGAAGGAAGTATC.................................................................................................................... 24 0 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................AATCTAGCCATGTCCGTCTGT............................................. 21 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGTATGTAACAGGCAGAAGGAAGTATC.................................................................................................................... 27 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCGTCTGTCTGTCCGTCT................................... 19 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................GTATGTAACAGGCAGAAG............................................................................................................................ 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TATGTAACAGGCAGAAGGAAGT....................................................................................................................... 22 0 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TTTTTGATCAGCATCAACAGCCG...................................................................... 23 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TATGTAACAGGCAGAAGGAAGTATC.................................................................................................................... 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCAGAAGGAA......................................................................................................................... 28 0 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTATGTAACAGGCAGAAGGAAGTGTTG................................................................................................................... 27 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AGCCAGGTCAATGTAGCCATG...................................................... 21 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TGTGCAAATGTATGTAACAGGC................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCTAATGTATGTAACAGGCAGAAG............................................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCA................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTATGTAACAGGCAGAAGGA.......................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................CAAATGTATGTAACAGGCAGAAGGAA......................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATGTAACAGGCAGAAGGAAGT....................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCAG............................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAGGCAGAA............................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................CAAATGTATGTAACAGGCAGAAGGA.......................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TAGCCATGTCCGTCTGTCTGTCC....................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTATGTAACAGGCAGAAGGAAGT....................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TAACAGGCAGAAGGAAGTATC.................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CAAATGTATGTAACAGGCAGAAGG........................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCT........................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................CAAATGTATGTAACAGGCAGAAG............................................................................................................................ 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGCAAATGTATGTAACAG................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................GCAAATGTATGTAACAGGC................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCAATCTAGCCATGTCCGTCT............................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGTAACAGGCAGAAGGAAGTATC.................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................ACAGGCAGAAGGAAGTATC.................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCAATCTAGCCATGTCCGTCTGT............................................. 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATAAAAAAAGTCTTAAAAAGATAACTTTTAATCACTTTACTGACCTAGTCCACTTATATACGTAATAATCATAATTCTCTTACAAACCTATATTTCACAAACACGTTTACATACATTGTCCGTCTTCCTTCATAGCGGGTGGGGTTTTTAATGTATATAAAAACTAGTCGTAGTTGTCGGCCCAGTTAGATCGGTACAGGCAGACAGACAGGCAGAAAGACAGGAAGGCATACATACTTACGTTCCTAGGA
***********************************************************************.................(((.....((.((...........(((((((.......)))))))....)).))....)))****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 V053
head
 SRR060679
140x9_testes_total
 M047
female body
 SRR060676
9xArg_ovaries_total
 SRR060678
9x140_testes_total
........................................................................................................................................................................................................................AAGAGCGGAAGGCATACA................. 18 2 4 0.25 1 1 0 0 0 0 0
.......................................................................................................................CCGTCGTCCTTCATACCGGGC............................................................................................................... 21 3 4 0.25 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................ACAGGGAGGCATACATACTTA........... 21 1 6 0.17 1 0 0 1 0 0 0
................................................................................................................ACATTGTCCGTCTTCCTTCA....................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0
.........................................................................................................................................................................................TTACATCGGTACAGGCAGACAG............................................ 22 1 20 0.05 1 0 0 0 0 0 1
............................................................................................................................................................................................GATCGGTACAGGCAGACAGACA......................................... 22 0 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:244425-244675 + dvi_3261 TATTTTTTTC-----AGAAT-TTTTCTATTG--------------------------------------------------AAAATTAGT---GAAATGA-----------------CTG------------GA----------------TC-------------------------AGGTGAATATA------------------------------------TGCATTATTAGTATTAAGA--GAA-TGTTTGGA-----TATAAAGTGTTTG--TGCAAA-----TGTATGTAACAGGCAGAAGGAAGTATCGCCCACCCCAAAAATTACATATATTTTTGATCAGCATCAACAGCCGGGTCAATCTAGCCATGTCCGTCTGTCTGTCCGTCTTTCTGTCC----TTCCGTATGTATGAATGCAAGGATC-------CT--------
droMoj3 scaffold_5363:1115-1372 + TTATTCCTTG-----AAT-TTT--TCAATTC--------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAAACTTTCAAATGAGTGTCACTTGCAAGCAGTGCATTCCCATTTTTCAATG-G-GAAATCAGGG-----TATAATGGTTTTG--TTGAAA-----TGTATGTAACAGGGAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGTGACGAGCTGAGTTGATTTGGCCCTGTCCGTCTGTCTGTCCGTCTGTCCGTCT----GTCCGTATGTATGAACGCGTCGATTTCAGAAGAT--------
droGri2 scaffold_15112:673624-673825 - TTTTTTCTTT-----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATACCATGAA-----------------------------CCTATTAAA------ACTG--G-GTAAAAAGGG-----TATAATGATTTTG--TGCAAA-----TGTATGTAACAGGCAGCAGGAAGTATCTCCGACCCCTTAAAGTATATATATTCTTGATCAGGGTCAACAGTCGAGTCGATATAGCCATGTCCGTCTGTCCGTCCGTCCGTT----------------TGTACGAACACGCAGATCTC---------------
droWil2 scf2_1100000004887:363099-363336 + TATTTTCTTA-----ATA-TTT--CTTATTTCA-------------------------------------AA------------AG-------------------TAATA---------------------------------------A--------------------ATTCTTAATTTTATTATA------------------------------------CCATACACC------CTTA--GGG-TGAAATGG-----TATATTAAAGTCG--CCAAAA-----TGTATGTAACAGGCAGAAGAAAGCATCTCCGACCCCACAAAGTATATATATTCTTGATCAGGATCAACAACCGAGTTGATTTAGCCATGTCTGTCTGTCCGTCCGTCCGTCT--------GTC----CGTATGAACACCTAGATCTCGGAGACT--------
dp5 Unknown_group_32:37255-37491 + TTTTTC---------AAAAT-TTTTCA--------------------------------------------------------------------------------ATG---------------------------------------A--------------------ATTTGTTTTTTTTTTATA------------------------------------CCCGTTACT------CAAAATGAG-TATAGGGG-----TATACTAGATTTTTGGTGAAAATGTATGTGTGTAACGTCCAGAAGGAAGCGTTTCCTACCCCATACAATATATATATTCTTGATCAGTATCAATAGCCAAGCCGATTGAGCCATGTCTGTCTGTCCGTCCGTCTGTC----TGTCCATC----CCTATGAGTGCCTAGTGCTTGGAGACT--------
droPer2 scaffold_108:985-1255 - TTTTTTTTTT-----GT----T--TTTATGG---------------------------------------TT---------AAAATTAGT--A---T--------TAGTAAACTTGA---TCTTCATAATGA---------AAAA--C-----------------------------ACATTTTTATA------------------------------------CCCGATACT------CAAAATGAG-TATTGGGA-----TATATTAGATTTTTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCCGTCCGTC----TGTCCGTC----CCCTTCAGCGCCTAATGCTCAAAGACT--------
droAna3 scaffold_13417:4030432-4030676 - ATTTTTTTAA-----TAA-T-TT-TTAATAA----ATTAATTATTTAAATTTTTA----------------------------------TAAA---TTAATTATTT---------AA---TTTTTAA--------------------------------------------------TAATTTGTATA------------------------------------CCCT-----------TGCA--G-------AGGG-----TATTATAATTTTG--GTCAAA-----AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTAAAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTCGGTCCGACTGTCC----GTCTGTCTGTTTCTACGCAA----------------------
droBip1 scf7180000391645:75853-76084 + TTATCTTTTA-----ATA-TTTT--TT-CCA---------------------------------------TA---------TGTAT-------------------TAATATATATA---------------T---------A-TGTAT----------------------ATAT---ATATATTTATA------------------------------------CCCT-----------TGCA--G-------AGGG-----TATTATAATTTTG--GTCAAA-----AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCTG----TCTGTCCGTCTGTCTG------------TCTGTTTCT--------
droKik1 scf7180000301334:150103-150341 + TTTACCTTAA-----AAA-TTT--CATATTATA------A------------------ATATTTGAAATT---------------------------------------GA------A-------------------GGTG---------CCAAGTGAAGCAAACATTTT---TGTAGTGTTATTACA------------------------------------CCCT-----------TGC-----------AGGG-----TATTATAATTTCA--GTCAGA-----AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCTG----TCCGTCTGTCTGTCTG-----------------------------
droFic1 scf7180000453495:207592-207837 + TATATGGATTTTTCGATC-TTT--CCTATGGCAGC------------------------------------------------TATA--TGAT---ATAGTTGTCC---------GA---TTTTTAT--------------------------------------------------GAATTTTTATA------------------------------------CCC-----T------TGCA--GAG-CAAAAGGG-----TATTATAATTTCA--GTCAGA-----AGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGAGCAGAGTCGGAATACGTCTGTACGTCTGTCCGTCTGTCCGTCTG----TCTGTCTGTCCGTCTG------------TCTGTTTCT--------
droEle1 scf7180000490292:1911-2165 - TAACTATTTC-----ATA-ATCA--TTATTC--------------------------------------------------ATAATCA-T---GTAATCA-----------------TTA------------GTTTAGGTG---------CCCACTAAAG-------------------------------------------------------------------GGCACT------CGTA--GAG-TAAAAGGGTGAATGAATACAATATCA--TTCAAA-----AGTATGTAACAGGTAGAAGGAAGCATTTCCGACAATATAAAGTATATATTTTTTTGATCAGAGTTAATAGCCGAGTCGATCTAGCTATGTTTTTCTGTCTGTCCGTCTGGCCGTCT----GTTCGTCTATATGAACGTCATGATTTCGGAAACT--------
droRho1 scf7180000764500:789-1030 + TAGTCTGATC-----AAAAA-TTTTGAAACTTG-------------------------------------GG------------AC-------------------CAATG---------------------------------------A--------------------T--CTTGATTTAATTATA------------------------------------TCCGTTACT------CGTA--GAG-TAAAAGGG-----TATATTGTATTCG--TGCAAA-----AGTATGTAACAGGTAGTAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGTC----TGTCTGTC----CGTATGAACGCAGAGATCTCGGAGACT--------
droBia1 scf7180000302421:1607329-1607561 + GACATCCTTG-----AGA-TG--------------------------------------------------------------------------------------------------------------A---------GAAA--CAA--------------------ACTGATTATGTTATTATA------------------------------------CCCGTTAAT------CGTA--GAG-TAA-AGGG-----TATACTAGATTCG--TCGGAA-----AGTATGTAACAGGTAAAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGATCACCAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTACCCGTCTATTC----GGCTGTCCGTATGAATGCTGAGATCTCGGAAACT--------
droTak1 scf7180000414397:10132-10386 + TTTTGTTTTT-----TATAATTT--TTTTGG---------------------------------------TGCGGGTGGAGTTTAG-------------------TAATT---------------------------------------A--------------------CT-CCC-ACATTTTTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAGGG-----TATATTGTATTCG--TGCAAA-----AGTATGTAACAGGGAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCTGTCCGTCT----GTCTGTCTGTATGAACGCTGAGATCTCAGAAACT--------
droEug1 scf7180000405459:7168-7408 + TTTTTTTTTA-----AGA-CTTT-GTCATTG--------------------------------------------------AATACT-----TGTAATGAT----T-A---------------------------------TAA--------------------------ACTC---TTATTTTTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAGGG-----TATACTAGATTCG--TTGAAA-----AGTATATAACAGATAGAAGGAAGATCTTGCGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTCCGTCCGTC----CGTCCGTC----CGTATGAACGCTGAGATCTC---------------
dm3 chr3RHet:611461-611698 + CATATTTTTC-----ACA-TGCC--CA-------CTCT--------------------------------A----------ATGTCC-----TAAAATCG---CCC-----------------------------------AAAA--C----------------------ACGC---TTTTGATTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAAAC-----TATTCTAGATTCG--TTGAAA-----AGTATGTAACAGGCAGAAGGAATCGTTTCCGACTATATGAAGTACATATATTTTGGATCATGATCAATACCCGAGTCGATCTAGTCATGTCCGTCTGTCCG----------------------------TATGAACGTCGGGATCTCAGGAACTATAAAAGC
droSim2 3l:23530403-23530627 + TGTTTTTTTT-----AACGT-TT-TTTGTTAT-----------------------------------------------------------------------------T---------------------------------------------------------TTT---TCCACAATAATTATA------------------------------------CCCGT----------------GAG-CAAAAGGT-----TTTACTAGATTAT--TTGAAA-----AGTATGTAACAGGCAGAAGGGTGCGCTTCCGACAATATAAAGCATTTATATTCTTGATCATGATCAATAGCCGAGTCGATCTGGCTATGTCCGTCCATCTATCCGTCTGTC----TGTCCGTC----CGTAAGAACGACGAGATCTCAGGATCT--------
droSec2 scaffold_4061:190-431 + TATATTTATT-----AAAGT-TTTCCGAGAG----TTTAATA-------ACTTTGTAAATAGTAAGAATT---------------------------------------G----------T---------------------------------------------TTTT---TGTAATTTTAT---------------------------------------------------------------------------------TTCAACTTCT-GTATGAAGTGCCTGTATGTACCAGGCAGAAGGATGCGTTTCCGGCCATATAAAGTATGTATATTCTTTATCAGGATCAATAGCCGTGTTGTTCTGGCCATGACCGTCCGTATGTCCATTTGTATGTCT----GGCCGTCCGTATGAACGTAGAGATCTCAAAAACT--------
droYak3 v2_chrUh_004:8061-8294 - TATTTTTAGC-----TC----C--TTTACTG---------------------------------------AA---------AGAAT------------AG-------ATG----------------------GA----------------TA------------------------GGCTTTATTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAGGG-----TATACTAGATTCG--TTGAAA-----AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCCGTCTGTCTGTCC----GTCTGTCCGTATGAACGTCGAGATCTC---------------
droEre2 scaffold_4929:20734899-20735145 + GATTGCTTTG-----AAA-TTT--GTTTTTGTT------T-----------------------------------------------------GTATTTGT----TAATAAATCTG---------------A---------A-GA-----CCAGTTG--------------------AAATTTGTATA------------------------------------CCCATTACT------CGTA--GAG-TACATGTG-----TATAATAGATTCG--TTGAAA-----AGTATGTAACATGCAGAAGAAAGCGTTTCCGACCATATAAAATA--TATATTCTTAATCAGCACCAATAGACGAGTCGAACTGGCCATGTCTATCTGTCCGTCCGTCTGTC----CTTCTATC----CGTATGAACGCCTCGATCTC---------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TATTTTTTTC-----AGAAT-TTTTCTATTG--------------------------------------------------AAAATTAGT---GAAATGA-----------------CTG------------GA----------------TC-------------------------AGGTGAATATA------------------------------------TGCATTATTAGTATTAAGA--GAA-TGTTTGGA-----TATAAAGTGTTTG--TGCAAA-----TGTATGTAACAGGCAGAAGGAAGTATCGCCCACCCCAAAAATTACATATATTTTTGATCAGCATCAACAGCCGGGTCAATCTAGCCATGTCCGTCTGTCTGTCCGTCTTTCTGTCC----TTCCGTATGTATGAATGCAAGGATC-------CT--------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................AAATTAGT---GAAATGA-----------------CTG------------G.............................................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
...............................................................................................AATGA-----------------CTG------------GA----------------TC-------------------------AGGTGAAT.........................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................ATTAGT---GAAATGA-----------------CTG------------GA----------------T...........................................................................................................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCAGAAGG..............................................................................................................................................26200.8016000000000000000000000000072010150000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCAGA.................................................................................................................................................23200.5511000000000000000000000004000001002040000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCC----TTCCGTATGTATGG............................2120.501100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCAGAAG...............................................................................................................................................25200.306000010000000000000000000000040001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAA............................................................................................................................................21200.204000001000030000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCAGAAGGA.............................................................................................................................................27200.153000000000000000000000000000100000001000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................TATATTTTTGATCAGCATCAACAGCC..........................................................................................2690.111000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAAGTATC.......................................................................................................................................24200.102000000001000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCTAGCCATGTCCGTCTGT................................................................21200.102000000000000000000000020000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAAGTATC.......................................................................................................................................27200.102000000000000000000000000002000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCTGTCCGTCT......................................................19200.102000000000000000000000000000000000000000000000000000000000000002
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAG...............................................................................................................................................18200.102000000000000000000000000200000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGT..........................................................................................................................................22200.102000000010000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TTTTTGATCAGCATCAACAGCCG.........................................................................................23100.101000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGTATC.......................................................................................................................................25200.102000000000000000000000000000000010000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCAGAAGGAA............................................................................................................................................28200.102000000000000000000000000000000000010100000000000000000000000000
.................................................................................................................................................................................................................................................................................TG--TGCAAA-----TGTATGTAACAGGC....................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCA...................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGA.............................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................CAAA-----TGTATGTAACAGGCAGAAGGAA............................................................................................................................................26200.051000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAAGT..........................................................................................................................................21200.051000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCAG..................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAGGCAGAA................................................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CAAA-----TGTATGTAACAGGCAGAAGGA.............................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCCGTCTGTCTGTCC..........................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGT..........................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGTATC.......................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................CAAA-----TGTATGTAACAGGCAGAAGG..............................................................................................................................................24200.051000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCT..............................................................21200.051000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CAAA-----TGTATGTAACAGGCAGAAG...............................................................................................................................................23200.051000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGCAAA-----TGTATGTAACAG......................................................................................................................................................18200.051000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................GCAAA-----TGTATGTAACAGGC....................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TCAATCTAGCCATGTCCGTCT..................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGTATC.......................................................................................................................................23200.051000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGTATC.......................................................................................................................................19200.051000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TCAATCTAGCCATGTCCGTCTGT................................................................23200.051000000000100000000000000000000000000000000000000000000000000000
droMoj3
TTATTCCTTG-----AAT-TTT--TCAATTC--------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAAACTTTCAAATGAGTGTCACTTGCAAGCAGTGCATTCCCATTTTTCAATG-G-GAAATCAGGG-----TATAATGGTTTTG--TTGAAA-----TGTATGTAACAGGGAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGTGACGAGCTGAGTTGATTTGGCCCTGTCCGTCTGTCTGTCCGTCTGTCCGTCT----GTCCGTATGTATGAACGCGTCGATTTCAGAAGAT--------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................CGAGCTGAGTTGATTTGGCCC...........................................................................21202.35474600001
...............................................................................................................................................................................................................................................................................................................................................................TGACGAGCTGAGTTGATTTGG..............................................................................21202.15434300000
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGGAGAAGGAG............................................................................................................................................21200.408800000
........................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCTGTCCGTCTG.....................................................21200.357700000
..............................................................................................................................................................................................................................................................................TTTTG--TTGAAA-----TGTATGTAAC........................................................................................................................................................21200.306600000
...................................................................................................................................................................................................................................................................................................ATGTAACAGGGAGAAGGAGGC..........................................................................................................................................21200.102000020
...............................................................................................................................................................................................................................................................................................................GAAGGAGGCGTGGCAGACCCCACAAA.........................................................................................................................26200.102200000
...........................................................................................................................................................................................................ATGAGTGTCACTTGCAAGCAGTGC...............................................................................................................................................................................................................................24110.091100000
...........................................................................................................................................................................................................ATGAGTGTCACTTGCAAGCAGT.................................................................................................................................................................................................................................22120.081000001
...........................................................................................................................................................................................................ATGAGTGTCACTTGCAAGC....................................................................................................................................................................................................................................19170.061100000
...........................................................................................................................................................................................................................................................................................................................................................................TTGATTTGGCCCTGTCCGTCT..................................................................21200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................TGGCCCTGTCCGTCTGTCTGTCCGTC.......................................................26200.051100000
........................................................................................................................................................................................................................................................................................................................................................ATCAGGGTGACGAGCTGAGTTGATT.................................................................................25200.051100000
.....................................................................................................................................................................................................................................................................................................GTAACAGGGAGAAGGAGG...........................................................................................................................................18200.051100000
..........................................................................................................................................................................................................................................................................................A-----TGTATGTAACAGGGAGAAGGAGT...........................................................................................................................................24200.051000010
..........................................................................................................................................................................................................................................................................................A-----TGTATGTAACAGGGAGAAGG..............................................................................................................................................21200.051000100
...............................................................................................................................................................................................................................................................................................................................................................................TTTGGCCCTGTCCGTCTGTCTGTCC..........................................................25200.051000001
........................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCCGTCT----GTCCGT....................................18200.051010000
.....................................................................................................................................................................................................................................................G-GAAATCAGGG-----TATAATGGTTTTG--T............................................................................................................................................................................25200.051100000
..............................................................................................................................................................................................................................................................GGG-----TATAATGGTTTTG--TTGAAA-----TGTA..............................................................................................................................................................26200.051000001
............................................................................................................................................................................................................................................................................................................GGAGAAGGAGGCGTGGCAG...................................................................................................................................19200.051100000
...........................................................................................................................................................................................................................................................................................................................................................AGGGTGACGAGCTGAGTTGATTTGG..............................................................................25200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCTGTCCGTCTGTCC..................................................24200.051000010
.....................................................................................................................................................................................................................................................................................................................................................TTGATCAGGGTGACGAGCTGAG.......................................................................................22200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCTGTCCGTC...............................................18200.051010000
.........................................................................................................................................................................................................................................................AATCAGGG-----TATAATGGTTTTG--TTGAA........................................................................................................................................................................26200.051100000
droGri2
TTTTTTCTTT-----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATACCATGAA-----------------------------CCTATTAAA------ACTG--G-GTAAAAAGGG-----TATAATGATTTTG--TGCAAA-----TGTATGTAACAGGCAGCAGGAAGTATCTCCGACCCCTTAAAGTATATATATTCTTGATCAGGGTCAACAGTCGAGTCGATATAGCCATGTCCGTCTGTCCGTCCGTCCGTT----------------TGTACGAACACGCAGATCTC---------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TATTTTCTTA-----ATA-TTT--CTTATTTCA-------------------------------------AA------------AG-------------------TAATA---------------------------------------A--------------------ATTCTTAATTTTATTATA------------------------------------CCATACACC------CTTA--GGG-TGAAATGG-----TATATTAAAGTCG--CCAAAA-----TGTATGTAACAGGCAGAAGAAAGCATCTCCGACCCCACAAAGTATATATATTCTTGATCAGGATCAACAACCGAGTTGATTTAGCCATGTCTGTCTGTCCGTCCGTCCGTCT--------GTC----CGTATGAACACCTAGATCTCGGAGACT--------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................CAACAACCGAGTTGATTTAGCCATG.........................................................................2511.00100010
............................................................................................................................................................................................................................................................................................................................................................................TGATTTAGCCATGTCTGTCTGTC...............................................................2311.00101000
...............................................................................................................................................................................................................................................................................................................................................................TCAACAACCGAGTTGATTTAGCCATGT........................................................................2711.00100010
.............................................................................................................A---------------------------------------A--------------------ATTCTTAATTTTATTATA------------------------------------CCATA.............................................................................................................................................................................................................................2511.00101000
...............................................................................................................................................................................................................................................................................................................................................................................TTTAGCCATGTCTGTCTGTCCGTCCG.........................................................2620.50101000
................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGAAAGCA.........................................................................................................................................25200.40800080
................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGAAAGCATC.......................................................................................................................................27200.15300030
......................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGAAAGCATCTC.....................................................................................................................................23200.10200020
........................................................................................................................................................................................................................................................................................................................................................................................................................GTC----CGTATGAACACCTAGATCTC...............23200.10220000
..........................................................................................................................................................................................................................................................................................................................................................................................................CCGTCT--------GTC----CGTATGAACACCTAGATC.................27200.10202000
...................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAACAACCGAGTT.....................................................................................26100.10100010
...............................................................................................................................................................................................................................................................GG-----TATATTAAAGTCG--CCAAAA-----TGTATG............................................................................................................................................................27200.10202000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCTGTCCGTCCGT........................................................21200.10202000
..................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAACAACCGAGTT.....................................................................................27100.10101000
........................................................................................................................................................................................................................................................................................................ACAGGCAGAAGAAAGCATCTC.....................................................................................................................................21200.10200020
......................................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAACAACCGAGTTGA...................................................................................25130.08100010
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGAAAGCATCTC.....................................................................................................................................27200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................TC----CGTATGAACACCTAGA...................18200.05100010
............................................................................................................................................................................................................................................................................................................GCAGAAGAAAGCATCTCCGACCCC..............................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGAAAGCATCT......................................................................................................................................28200.05101000
....................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGAAAGCATCTC.....................................................................................................................................25200.05100010
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGAAAGCATC.......................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAACAACCG.........................................................................................21200.05100010
......................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGAAAGCATCTCCGACCC...............................................................................................................................29200.05101000
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAG...............................................................................................................................................18200.05101000
.........................................................................................................................................................................................................................................................................................................CAGGCAGAAGAAAGCATCTCC....................................................................................................................................21200.05100010
..................................................................................................................................................................................................................................................................................................................GAAAGCATCTCCGACCCCACAAAGTATA....................................................................................................................28200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGTCCGTCT--------GTC----CGTA...............................20200.05110000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCTGTCCGTC...........................................................18200.05110000
.................................................................................................................................................................................................................................................................................CG--CCAAAA-----TGTATGTAACAGGCA...................................................................................................................................................23200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCCGTCT--------GTC----CGTATG.............................21200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCTGTCTGTCCGTCC..........................................................23200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCC......................................................19200.05110000
....................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGAAAGCATCTCC....................................................................................................................................26200.05100010
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGAA.............................................................................................................................................20200.05100100
.........................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCT--------GTC----CGTATGAACACC.......................22200.05101000
...................................................................................................................................................................................................................................................................................................................AAAGCATCTCCGACCCCACA...........................................................................................................................20200.05101000
........................................................................................................................................................................................................................................................................TATTAAAGTCG--CCAAAA-----TGTA..............................................................................................................................................................21200.05100001
..............................................................................................................................................................................................................................................................TGG-----TATATTAAAGTCG--CCAAAA-----TG................................................................................................................................................................24200.05101000
dp5
TTTTTC---------AAAAT-TTTTCA--------------------------------------------------------------------------------ATG---------------------------------------A--------------------ATTTGTTTTTTTTTTATA------------------------------------CCCGTTACT------CAAAATGAG-TATAGGGG-----TATACTAGATTTTTGGTGAAAATGTATGTGTGTAACGTCCAGAAGGAAGCGTTTCCTACCCCATACAATATATATATTCTTGATCAGTATCAATAGCCAAGCCGATTGAGCCATGTCTGTCTGTCCGTCCGTCTGTC----TGTCCATC----CCTATGAGTGCCTAGTGCTTGGAGACT--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................ACTAGATTTTTGGTGAAAATG....................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................GGGG-----TATACTAGATTTTTGGTG..........................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................TCCAGAAGGAAGCGTTTCCTA..................................................................................................................................2130.6720000002000
........................................................................................................................................................................................................................................................................................................................................................................AAGCCGATTGAGCCATGTCTG.....................................................................2120.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCCGTCTGTC----TGTCCA.........................................2620.5010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCCGTCTGTC----TGTCCATC----...................................2420.5010100000000
...............................................................................................................................................................................................................................................................................TTTTTGGTGAAAATGTATGTG..............................................................................................................................................................2120.5010000001000
.........................................................................................................................................................................................................................................................................................................................................................................AGCCGATTGAGCCATGTCTGT....................................................................2130.3310010000000
....................................................................................................................................................................................TTTTTATA------------------------------------CCCGTTACT------CAAA...............................................................................................................................................................................................................2140.2510100000000
................................................................................................................................................................................................................................................................................................................................................................................TGAGCCATGTCTGTCTGTCCGTCCG.........................................................25200.2550300000020
..........................................................................................................................................................................................................................................................................................................................................................................................................CTGTC----TGTCCATC----CCTATGAG...........................2140.2510100000000
.........................................................................................................................................................................................................................................................................................................................................................................AGCCGATTGAGCCATGTCTG.....................................................................2040.2510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTC----TGTCCATC----CCTATGA............................1940.2510100000000
...................................................................................................................................................................................................................................................................................TGGTGAAAATGTATGTGTGTA..........................................................................................................................................................2180.1310000010000
..................................................................................................................................................................................................................................................................................................................................................................................AGCCATGTCTGTCTGTCCGTC...........................................................21200.1020000002000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCTGTCCGTCC..........................................................19200.1020100100000
........................................................................................................................................................................................................................................T------CAAAATGAG-TATAGGGG-----TAT.........................................................................................................................................................................................21200.1020200000000
..................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGTATCAATAGC...........................................................................................21200.1020001010000
.............................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCTGTC----TGTCC..........................................23100.1010100000000
..............................................................................................................................................................................................................................................................................................................................................................................ATTGAGCCATGTCTGTCTGT................................................................20200.1020200000000
...............................................................................................................................................................................................................................................................................................................................................................................TTGAGCCATGTCTGTCTGTCCG.............................................................22200.1020200000000
..........................................................................................................................................................................................................................................................................................AATGTATGTGTGTAACGTCC....................................................................................................................................................20100.1010000001000
.....................................................................................................................................................................................................................................TACT------CAAAATGAG-TATAGGGG-----TA..........................................................................................................................................................................................23200.1020200000000
........................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCTGTCCGTCCGTCTG.....................................................21200.1020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCCGTCTGTC----TG.............................................22160.0610100000000
...............................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGTATCAATA.............................................................................................22190.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCCGTCCGTCTGTC----...............................................24200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................ATTGAGCCATGTCTGTCTGTC...............................................................21200.0510000000100
.............................................................................................................................................................................................................................................................................................................................................................................GATTGAGCCATGTCTGTCTG.................................................................20200.0510000000010
.....................................................................................................................................................................................................................................TACT------CAAAATGAG-TATAGGG..................................................................................................................................................................................................20200.0510100000000
.....................................................................................................................................................................................................................................TACT------CAAAATGAG-TATAGG...................................................................................................................................................................................................19200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................CTGTCCGTCCGTCTGTC----TGT............................................20200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGTCTGTCCGTCCG.........................................................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCTGT....................................................21200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................ATTGAGCCATGTCTGTCTGTCCG.............................................................23200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCTGTCCGTCCG.........................................................20200.0510000001000
....................................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGTCTGTCCGTC...........................................................19200.0510000000100
...........................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCCGTCTG.....................................................18200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGTCTGTCCGTCCGT........................................................20200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCTGTC----TGT............................................21200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................GATTGAGCCATGTCTGTCT..................................................................19200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCTGTC----TG.............................................20200.0510100000000
..............................................................................................................................................................................................................................................................................................TATGTGTGTAACGTCCAGAAG...............................................................................................................................................21200.0510000010000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCT......................................................19200.0510100000000
...................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAAGGAAG...........................................................................................................................................20200.0510000001000
...............................................................................................................................................................................................................................................................................................................................................................................TTGAGCCATGTCTGTCTGTCC..............................................................21200.0510000000100
droPer2
TTTTTTTTTT-----GT----T--TTTATGG---------------------------------------TT---------AAAATTAGT--A---T--------TAGTAAACTTGA---TCTTCATAATGA---------AAAA--C-----------------------------ACATTTTTATA------------------------------------CCCGATACT------CAAAATGAG-TATTGGGA-----TATATTAGATTTTTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCCGTCCGTC----TGTCCGTC----CCCTTCAGCGCCTAATGCTCAAAGACT--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................TACT------CAAAATGAG-TATTGGGA-----............................................................................................................................................................................................21183.06550514000
.....................................................................................................................................................................................................................................................................................GTAAAAGTGGATGTGTGTAACG.......................................................................................................................................................22200.55110000011
.............................................................................................................AAACTTGA---TCTTCATAATGA---------.....................................................................................................................................................................................................................................................................................................................2020.501001000
.....................T--TTTATGG---------------------------------------TT---------AAAATTAGT--A---T--------TAGT.....................................................................................................................................................................................................................................................................................................................................................2520.501010000
.......................................................................................................................................................................................................................................CT------CAAAATGAG-TATTGGGA-----............................................................................................................................................................................................19180.173030000
................................................................................................................................................................................................................................................AAAATGAG-TATTGGGA-----TATATTAGAT..................................................................................................................................................................................2690.111010000
.....................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATTGAGCCAT..........................................................................19200.102000002
.................................................................................................................................................................................................................................................AAATGAG-TATTGGGA-----TATATT......................................................................................................................................................................................21100.101000001
......................................................................................................................................................................................................................................ACT------CAAAATGAG-TATTGGGA-----............................................................................................................................................................................................20180.061010000
........................................................................................................................................................................................................................................T------CAAAATGAG-TATTGGGA-----............................................................................................................................................................................................18190.051010000
.........................................................................................................................................................................................................................................................................ATTAGATTTTTGGTAAAAGT.....................................................................................................................................................................20200.051000001
.................................................................................................................................................................................................................................................................................TTTGGTAAAAGTGGATGTGTGT...........................................................................................................................................................22200.051000001
........................................................................................................................................................................................................................................................................TATTAGATTTTTGGTAAAAGTG....................................................................................................................................................................22200.051010000
.................................................................................................................................................................................................................................................................................TTTGGTAAAAGTGGATGTGT.............................................................................................................................................................20200.051000001
...............................................................................................................................................................................................................................................................................TTTTTGGTAAAAGTGGATGTG..............................................................................................................................................................21200.051000001
droAna3
ATTTTTTTAA-----TAA-T-TT-TTAATAA----ATTAATTATTTAAATTTTTA----------------------------------TAAA---TTAATTATTT---------AA---TTTTTAA--------------------------------------------------TAATTTGTATA------------------------------------CCCT-----------TGCA--G-------AGGG-----TATTATAATTTTG--GTCAAA-----AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTAAAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTCGGTCCGACTGTCC----GTCTGTCTGTTTCTACGCAA----------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................GCAGTGAAGGAGACATCTCCGA..................................................................................................................................22200.75150000015
......................................................................................................................................................................................................................................................................................................................................AAAGTATATATATTCTTGATCAGG....................................................................................................24200.153300000
............................................................................................................................................................................................................................................................................................................................................................................................................GACTGTCC----GTCTGTCTGTTTCTA...........................2370.141010000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTCTGTCCGTCGGTC.......................................................22200.102200000
......................................................................................................................................................................................................................................................................................................................................................................CTGAGTCGATATGAGCATGTCCGTCT..................................................................26200.051000001
.......................................................................................................................................................................................................................................................................................................................................................................TGAGTCGATATGAGCATGTCCGTCTGT................................................................27200.051010000
.......................................................................................................................................................................................................................................................................................................................CATCTCCGACCCTAAAAAGT.......................................................................................................................20200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................TGAGTCGATATGAGCATGTC.......................................................................20200.051010000
droBip1
TTATCTTTTA-----ATA-TTTT--TT-CCA---------------------------------------TA---------TGTAT-------------------TAATATATATA---------------T---------A-TGTAT----------------------ATAT---ATATATTTATA------------------------------------CCCT-----------TGCA--G-------AGGG-----TATTATAATTTTG--GTCAAA-----AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCTG----TCTGTCCGTCTGTCTG------------TCTGTTTCT--------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTACCTTAA-----AAA-TTT--CATATTATA------A------------------ATATTTGAAATT---------------------------------------GA------A-------------------GGTG---------CCAAGTGAAGCAAACATTTT---TGTAGTGTTATTACA------------------------------------CCCT-----------TGC-----------AGGG-----TATTATAATTTCA--GTCAGA-----AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCTG----TCCGTCTGTCTGTCTG-----------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TATATGGATTTTTCGATC-TTT--CCTATGGCAGC------------------------------------------------TATA--TGAT---ATAGTTGTCC---------GA---TTTTTAT--------------------------------------------------GAATTTTTATA------------------------------------CCC-----T------TGCA--GAG-CAAAAGGG-----TATTATAATTTCA--GTCAGA-----AGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGAGCAGAGTCGGAATACGTCTGTACGTCTGTCCGTCTGTCCGTCTG----TCTGTCTGTCCGTCTG------------TCTGTTTCT--------SizeHit CountTotal NormTotal
No Reads
droEle1
TAACTATTTC-----ATA-ATCA--TTATTC--------------------------------------------------ATAATCA-T---GTAATCA-----------------TTA------------GTTTAGGTG---------CCCACTAAAG-------------------------------------------------------------------GGCACT------CGTA--GAG-TAAAAGGGTGAATGAATACAATATCA--TTCAAA-----AGTATGTAACAGGTAGAAGGAAGCATTTCCGACAATATAAAGTATATATTTTTTTGATCAGAGTTAATAGCCGAGTCGATCTAGCTATGTTTTTCTGTCTGTCCGTCTGGCCGTCT----GTTCGTCTATATGAACGTCATGATTTCGGAAACT--------SizeHit CountTotal NormTotal
No Reads
droRho1
TAGTCTGATC-----AAAAA-TTTTGAAACTTG-------------------------------------GG------------AC-------------------CAATG---------------------------------------A--------------------T--CTTGATTTAATTATA------------------------------------TCCGTTACT------CGTA--GAG-TAAAAGGG-----TATATTGTATTCG--TGCAAA-----AGTATGTAACAGGTAGTAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGTC----TGTCTGTC----CGTATGAACGCAGAGATCTCGGAGACT--------SizeHit CountTotal NormTotal
No Reads
droBia1
GACATCCTTG-----AGA-TG--------------------------------------------------------------------------------------------------------------A---------GAAA--CAA--------------------ACTGATTATGTTATTATA------------------------------------CCCGTTAAT------CGTA--GAG-TAA-AGGG-----TATACTAGATTCG--TCGGAA-----AGTATGTAACAGGTAAAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGATCACCAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTACCCGTCTATTC----GGCTGTCCGTATGAATGCTGAGATCTCGGAAACT--------SizeHit CountTotal NormTotal
No Reads
droTak1
TTTTGTTTTT-----TATAATTT--TTTTGG---------------------------------------TGCGGGTGGAGTTTAG-------------------TAATT---------------------------------------A--------------------CT-CCC-ACATTTTTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAGGG-----TATATTGTATTCG--TGCAAA-----AGTATGTAACAGGGAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCTGTCCGTCT----GTCTGTCTGTATGAACGCTGAGATCTCAGAAACT--------SizeHit CountTotal NormTotal
No Reads
droEug1
TTTTTTTTTA-----AGA-CTTT-GTCATTG--------------------------------------------------AATACT-----TGTAATGAT----T-A---------------------------------TAA--------------------------ACTC---TTATTTTTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAGGG-----TATACTAGATTCG--TTGAAA-----AGTATATAACAGATAGAAGGAAGATCTTGCGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTCCGTCCGTC----CGTCCGTC----CGTATGAACGCTGAGATCTC---------------SizeHit CountTotal NormTotal
No Reads
dm3
CATATTTTTC-----ACA-TGCC--CA-------CTCT--------------------------------A----------ATGTCC-----TAAAATCG---CCC-----------------------------------AAAA--C----------------------ACGC---TTTTGATTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAAAC-----TATTCTAGATTCG--TTGAAA-----AGTATGTAACAGGCAGAAGGAATCGTTTCCGACTATATGAAGTACATATATTTTGGATCATGATCAATACCCGAGTCGATCTAGTCATGTCCGTCTGTCCG----------------------------TATGAACGTCGGGATCTCAGGAACTATAAAAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................TGGATCATGATCAATACCCGAGTCGA...................................................................................26119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000010407040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCAATACCCGAGTCGATCTAGTCATG.........................................................................26114.00140000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000100000100310000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000001000000
.................................................................................................................................................................................................................................................................................................................AGGAATCGTTTCCGACTATATGAAG........................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000103020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCG--TTGAAA-----AGTATGTAACAGGCAGA.................................................................................................................................................26207.9015800000010000000000000000200000000000000403000003020003000000000000000000000000000007000200000000000000000000000000001000000000000000000000000000000100000608000000000000000000000000000000000100003005150100003700010000000000028100000000000000000000000000000000000000000000000000000000000000000000100000000000160000000000000000006000000
.....................................................................................................................................................................................................................................................................................................................................................TGGATCATGATCAATACCCGAGTCGATC.................................................................................2816.0060000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCG----------------------------TATGAACGTCGGGA...................2625.50110000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000002000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTCTGTCCG----------------------------TATGAACGTC.......................26205.45109000000000000000000000000000000000000200000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000010000200000905033000060000000000000000000000000000000000000000000000000100002000200000000000024000000000110000000000000000000000000000000000000000000000000000000012460000001579000000000000001302000000
................................................................................................................................................................................................................................................................................................................................................................CAATACCCGAGTCGATCTAGTCATG.........................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTTTGATTATA------------------------------------CCCGTTACT------CGTA--GAG-.........................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATTTTTC-----ACA-TGCC--CA-------CTCT--------------------------------A----------ATGTCC-----......................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACTATATGAAG........................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000020002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTTGATTATA------------------------------------CCCGTTACT------CGTA--GAG-.........................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000200000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TTGATTATA------------------------------------CCCGTTACT------CGTA--GAG-.........................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTTTTC-----ACA-TGCC--CA-------CTCT--------------------------------A----------ATGTCC-----......................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCG----------------------------TATGAACGTC.......................24204.509000000000000000000000010100000000000000000000000130000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000121300111030300000000000000000000000000000000000003000000300003050000012000000150010700000000000000000000000000000000000000000000000000000000000002000000620020000700000000000000001502000000
.....................................................................................................................................................................................................................................................................................................................................................................CCCGAGTCGATCTAGTCATGTCCGTC...................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..............................................................................................................................................................................................................................................................AAC-----TATTCTAGATTCG--TTGAAA-----AG................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TTGGATCATGATCAATACCCGAGTCGA...................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCG--TTGAAA-----AGTATGTAACAGGCAGAA................................................................................................................................................27203.70740000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000100000000000000000000000000060032101700000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCG----------------------------TATGAACGTCGGGAT..................2723.5070000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
.........................................................................................................................................................................................................................................................................................................................................................TCATGATCAATACCCGAGTCGATC.................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TACCCGAGTCGATCTAGTCATGTCCGTC...................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TCATGATCAATACCCGAGTCGATCTAG..............................................................................2713.0030000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TTTGGATCATGATCAATACCCGAGTCGA...................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................................................................................................................CTGTCCG----------------------------TATGAACGTCGGGA...................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCGGGATCTCAGGAACT........2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------TATGAACGTCGGGATCTCAGGAAC.........2540.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCG----------------------------TATGAACGTC.......................25200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000100000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAATCGT........................................................................................................................................2470.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAATCGTTTCCG...................................................................................................................................2570.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAATCGT........................................................................................................................................2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCCGTC...................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCCGTCTGT................................................................2450.4020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................CTAGATTCG--TTGAAA-----AGTATG............................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000001010
..........................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCC......................................................................1850.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGTCATGTCCGTCTGTCC..............................................................2550.4020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GATCTAGTCATGTCCGTCTG.................................................................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCAGAAGGAAT...........................................................................................................................................2650.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................ATTCTAGATTCG--TTGAAA-----AGT...............................................................................................................................................................21100.4040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCTAGTCATGTCCGTCTGTC...............................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCG----------------------------TATGAACGTC.......................18200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000005000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................GAAA-----AGTATGTAACAGGCAGAAGGA.............................................................................................................................................25200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000401000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GAAA-----AGTATGTAACAGGCAGA.................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TAGTCATGTCCGTCTGTCCG----------------------------TATGAAC..........................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CG----------------------------TATGAACGTCGGGATCTCAGGAAC.........2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCCG----------------------------TATGAACGTCGG.....................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TATTCTAGATTCG--TTGAAA-----AGT...............................................................................................................................................................2290.3330000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTAGTCATGTCCGTC...................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAACGTCGGGATCTCAGGAACTA.......2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAAA..................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CG----------------------------TATGAACGTCGGGATCTCAGG............2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCG----------------------------TATGAACGTCGGGATCTCAGGAAC.........2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................A-----AGTATGTAACAGGCAGAAGGAATCG.........................................................................................................................................2660.3320000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCG----------------------------TATGAACGTCGG.....................2430.3310000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTAGTCATGTCC......................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCG----------------------------TATGAACGTCGGGA...................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGATCTCAGGAACTATAAAAGC2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCTAGTCATGTCCGTCTGTCCG----------------------------TATGAAC..........................2930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCCG----------------------------TATGAACGTCGGGA...................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGTCGGGATCTCAGGAACTA.......2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCG----------------------------TATGAACGTCGG.....................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GTCCG----------------------------TATGAACGTCGGGATC.................2160.3320000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCG----------------------------TATGAACGTCGGGATCTC...............2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CGTTTCCGACTATATGAAGT.......................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTCCG----------------------------TATGAACGTCGG.....................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTCAGGAACTATAAAAGC2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAATCGTTTC.....................................................................................................................................23100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCG----------------------------TATGAA...........................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCG----------------------------TATGAAC..........................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000120000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCG----------------------------TATGAACG.........................20200.3060000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000000000000
..........................................................................................................................................................................................................................................................................................A-----AGTATGTAACAGGCAGAAGGA.............................................................................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001
........................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAATCGTTTCCG...................................................................................................................................2370.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAATCGTT.......................................................................................................................................2370.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000
........................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAATCGTTTC.....................................................................................................................................21110.2730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAGGCAGAAGGAATCGTTTCCGACTA...............................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGTCGATCTAGTCATGTCCGT....................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAATCGTTTCC....................................................................................................................................2380.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCTAGTCATGTCCGTCTGTCCG----------------------------T................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GATCTAGTCATGTCCGTCTGTCCG----------------------------TA...............................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTCGGGATCTCAGG............1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCTAGTCATGTCCGTCTGTCCG----------------------------TA...............................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCTAGTCATGTCCGTCTGTCCG----------------------------T................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TAGTCATGTCCGTCTGTCCG----------------------------T................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCATGTCCGTCTGTCCG----------------------------TATGAACG.........................2580.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCTAGTCATGTCCGTCTGTCCG----------------------------TAT..............................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCATGTCCGTCTGTCCG----------------------------TATGAAC..........................2480.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCG----------------------------TATGAACG.........................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000001000000200000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GATCTAGTCATGTCCGTCTGTCCG----------------------------T................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCTAGTCATGTCCGTCTGTCCG----------------------------TATT.............................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CTGTCCG----------------------------TATGAACGTCGGG....................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CG----------------------------TATGAACGTCGGGATCTCA..............2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAACGTCGGGATCTCAGGA...........2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCG----------------------------TATGAACGTCGGGAA..................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CTAGTCATGTCCGTCTGTCCG----------------------------TA...............................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TAGTCATGTCCGTCTGTCCG----------------------------TATGAA...........................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGTTTTTTTT-----AACGT-TT-TTTGTTAT-----------------------------------------------------------------------------T---------------------------------------------------------TTT---TCCACAATAATTATA------------------------------------CCCGT----------------GAG-CAAAAGGT-----TTTACTAGATTAT--TTGAAA-----AGTATGTAACAGGCAGAAGGGTGCGCTTCCGACAATATAAAGCATTTATATTCTTGATCATGATCAATAGCCGAGTCGATCTGGCTATGTCCGTCCATCTATCCGTCTGTC----TGTCCGTC----CGTAAGAACGACGAGATCTCAGGATCT--------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGT............................................................................................................................................2023.00600000000006000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGTGCGCT.......................................................................................................................................2522.50500000000005000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGTGC..........................................................................................................................................2222.50500000000005000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGTGCGC........................................................................................................................................2422.50500000000005000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCAGAAGGG.............................................................................................................................................2442.00800000000008000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCAGAAGGGT............................................................................................................................................2522.00400000000004000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CGTAAGAACGACGAGATCTCAGGAT..........2522.00400000001001020000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGTGCG.........................................................................................................................................2321.50300000000003000000
......................................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTC----TGTCCGTC----CGTAAGAACGA........................2821.50300000030000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TC----CGTAAGAACGACGAGATCTCAGGA...........2621.50300000011000010000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAG...............................................................................................................................................17201.4529000000000029000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGTG...........................................................................................................................................2121.00200000000002000000
.................................................................................................................................................................................................................................................................................................................................................................................TGGCTATGTCCGTCCATCTATCCGTC.......................................................2621.00200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTC----TGTCCGTC----CGTAAGAACGACGA.....................2621.00200000000002000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTC----CGTAAGAACGACGAGAT..................2520.50100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................GTCGATCTGGCTATGTCCGTCCATCTA.............................................................2720.50100000000100000000
.....................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGGTGC..........................................................................................................................................1920.50100000000001000000
........................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGGTGCGC........................................................................................................................................1820.50100000000001000000
....................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGGTGCGCTT......................................................................................................................................2420.50100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTC----TGTCCGTC----CGTAAGAACGACG......................2520.50100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TATCCGTCTGTC----TGTCCGTC----CGTAAGG............................2720.50100100000000000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCAGAAGGGTG...........................................................................................................................................2620.50100000000001000000
..........................................................................................................................................................................................TA------------------------------------CCCGT----------------GAG-CAAAAGGT-----TTTACTAGA...................................................................................................................................................................................2720.50100000010000000000
.................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGGTGCGC........................................................................................................................................2520.50100000000001000000
...................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGGTGCGC........................................................................................................................................2320.50100000000001000000
......................................................................................................................................................................................................................................................................................................................................................TGATCATGATCAATAGCCGAGTCGAT..................................................................................2620.50100000010000000000
........................................................................................................................................................................................TATA------------------------------------CCCGT----------------GAG-CAAAAGGT-----TTTACTAGAA..................................................................................................................................................................................3020.50100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TATGTCCGTCCATCTATCCGTCTGTC----...............................................2620.50100000000000010000
........................................................................................................................................................................................TATA------------------------------------CCCGT----------------GAG-CAAAAGGT-----TTTACT......................................................................................................................................................................................2620.50100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................TTGATCATGATCAATAGCCGAGTCGATC.................................................................................2820.50100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGTC----CGTAAGAACGACGAGATCTCAGGA...........2820.50100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................TCTGTC----TGTCCGTC----CGTAAGAACGA........................2520.50100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTC----CGTAAGAACGACG......................1920.50100000000001000000
....................................................................................................................................................................................................................................T----------------GAG-CAAAAGGT-----TTTACTAGATA.................................................................................................................................................................................2320.50100000000001000000
...........................................................................................................................................................................................................................................................................TAGATTAT--TTGAAA-----AGTATGTAACAGGC....................................................................................................................................................2820.50100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTC----CGTAAGAACGACGAGATCTCAG.............2520.50100000010000000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCAGAAGGGTC...........................................................................................................................................2620.50100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGTC----TGTCCGTC----CGTAAGAACGACGAGA...................2820.50100000010000000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGTGCGCTT......................................................................................................................................2620.50100000000001000000
......................................................................................................................................................................................................................................................................................TGAAA-----AGTATGTAACAGGCAGAAGG..............................................................................................................................................25200.45900000002340000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCAGAAGG..............................................................................................................................................23200.35700000007000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCTATGTCCGTCCT.................................................................2630.33100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCTATCCGTCTGTC----TG.............................................1630.33100000000001000000
............................................................................................................................................................................................................................................................................................................................................................TGATCAATAGCCGAGTCGATCTGGC.............................................................................2560.33200000010100000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGGTGA..........................................................................................................................................2230.33100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATC.................................................................................18200.25500000003002000000
......................................................................................................................................................................................................................................................................................TGAAA-----AGTATGTAACAGGCAGAAGGG.............................................................................................................................................2640.25100000000100000000
..................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGG.............................................................................................................................................1950.20100000000001000000
..................................................................................................................................................................................................................................................................................T--TTGAAA-----AGTATGTAACAGGCAGAAGA..............................................................................................................................................27200.15300000000300000000
................................................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATCTGGC.............................................................................21200.15300000000003000000
..............................................................................................................................................................................................................................................................................................................................................................ATCAATAGCCGAGTCGATCTG...............................................................................21200.10200200000000000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCAGAAGGGG............................................................................................................................................25140.07100000000001000000
........................................................................................................................................................................................................................................................................................AAA-----AGTATGTAACAGGCA...................................................................................................................................................18200.05100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGA...................................................................................16200.05100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................GATCAATAGCCGAGTCGATCTGG..............................................................................23200.05100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTGGC.............................................................................17200.05100000010000000000
......................................................................................................................................................................................................................................................................................TGAAA-----AGTATGTAACA.......................................................................................................................................................16200.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTGG..............................................................................15200.05100000000001000000
droSec2
TATATTTATT-----AAAGT-TTTCCGAGAG----TTTAATA-------ACTTTGTAAATAGTAAGAATT---------------------------------------G----------T---------------------------------------------TTTT---TGTAATTTTAT---------------------------------------------------------------------------------TTCAACTTCT-GTATGAAGTGCCTGTATGTACCAGGCAGAAGGATGCGTTTCCGGCCATATAAAGTATGTATATTCTTTATCAGGATCAATAGCCGTGTTGTTCTGGCCATGACCGTCCGTATGTCCATTTGTATGTCT----GGCCGTCCGTATGAACGTAGAGATCTCAAAAACT--------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................GTATGTATATTCTTTATCAGGATC.................................................................................................2450.4022000
................................................................................................................................................................................................................................................................................................TGTATGTACCAGGCAGAAGGATGCGTT.......................................................................................................................................2740.2511000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATTTGTATGTCT----GGCCGTCC..................................2540.2511000
......................................................................................................................................................................................................................................................................................ATGAAGTGCCTGTATGTACCA.......................................................................................................................................................2140.2510010
.................................................................................................................................................................................................................................................................................................................................................................................................TATGTCCATTTGTATGTCT----GG........................................2140.2511000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATGTCT----GGCCGTCCGTATGAA...........................2140.2510010
...........................................................TAGTAAGAATT---------------------------------------G----------T---------------------------------------------TTTT---TGTAATTT.............................................................................................................................................................................................................................................................................2540.2510001
.....................................................................................................................................................................................................................................................................................TATGAAGTGCCTGTATGTACC........................................................................................................................................................2140.2510001
................................................................................................................................................................................................................................................................................................................................................................CAATAGCCGTGTTGTTCTG...............................................................................1940.2511000
...................................................................................................................................................................................................................................................................................................................................................................................................................T----GGCCGTCCGTATGAACGTAGAGATC.................2640.2511000
.........................................................................................................................................................................................................................................................................................................................................................................TGTTGTTCTGGCCATGACCGTT...................................................................2240.2510010
....................................................................................................................................................................................................................................................................................................................................................................................CCATGACCGTCCGTATGTCCC.........................................................2140.2511000
.........................................................................................................................................................................................................................................................................................................................................GTATGTATATTCTTTATCAGGATCA................................................................................................2550.2011000
............................................................................................................................................................................................................................................................................................................................................TGTATATTCTTTATCAGGATCAAT..............................................................................................2450.2011000
.............................................................................................................................................................................................................................................................................................................................................GTATATTCTTTATCAGGATCAA...............................................................................................2250.2011000
................................................................................................................................................................................................................................................................................................................................................TATTCTTTATCAGGATCAATA.............................................................................................21130.0811000
droYak3
TATTTTTAGC-----TC----C--TTTACTG---------------------------------------AA---------AGAAT------------AG-------ATG----------------------GA----------------TA------------------------GGCTTTATTATA------------------------------------CCCGTTACT------CGTA--GAG-TAAAAGGG-----TATACTAGATTCG--TTGAAA-----AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCCGTCTGTCTGTCC----GTCTGTCCGTATGAACGTCGAGATCTC---------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAGTAGCC..........................................................................................22201.1022002200000000
.....................................................................................T------------AG-------ATG----------------------GA----------------TA------------------------GGCTTTATTATA------------------------------------CCCG..............................................................................................................................................................................................................................2611.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTCC----GTCTGTCCGTATGAACGTCGAGA...................28200.8517001700000000
.....................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAGTAGCCGAG.......................................................................................22200.15303000000000
................................................................................................................................................................................................................................................................................................................................................................................CTGGCCATGTCCGTCTGTCC..............................................................20200.15303000000000
......................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTGGCCATGTC.......................................................................21200.10220000000000
.....................................................................................................................................................................................................................................................................................TTGAAA-----AGTATGTAACAGGCAGAAGG..............................................................................................................................................26200.10200020000000
..................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAGTAGCCGAT.......................................................................................25200.05100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTCCGTCTGTCTG.................................................26200.05100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGTCC----GTCTGTCCGTATGAACG.........................27200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTCCGTCCGTCTGTCT..................................................22200.05101000000000
droEre2
GATTGCTTTG-----AAA-TTT--GTTTTTGTT------T-----------------------------------------------------GTATTTGT----TAATAAATCTG---------------A---------A-GA-----CCAGTTG--------------------AAATTTGTATA------------------------------------CCCATTACT------CGTA--GAG-TACATGTG-----TATAATAGATTCG--TTGAAA-----AGTATGTAACATGCAGAAGAAAGCGTTTCCGACCATATAAAATA--TATATTCTTAATCAGCACCAATAGACGAGTCGAACTGGCCATGTCTATCTGTCCGTCCGTCTGTC----CTTCTATC----CGTATGAACGCCTCGATCTC---------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................ATAATAGATTCG--TTGAAA-----AGT...............................................................................................................................................................21200.0510000010

Generated: 05/16/2015 at 09:49 PM