ID:

dvi_3249

 Coordinate:

scaffold_12855:219661-219811 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.7

Flybase annnotation

CDS [Dvir\GJ10563-cds]; exon [dvir_GLEANR_10479:9]; intron [Dvir\GJ10563-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
Hoana1DNAhAT-hobo+
Helitron-2N1_DVirRCHelitron-
mature
  1. scaffold_78:630-647 +
  2. scaffold_138:466-483 +
  3. scaffold_10120:61-78 +
  4. scaffold_10377:3532-3549 +
  5. scaffold_12726:2692950-2692967 +
  6. scaffold_12843:39937-39954 -
  7. scaffold_12843:41021-41038 -
  8. scaffold_12843:41954-41971 -
  9. scaffold_12843:45354-45371 -
  10. dvi_3249  scaffold_12855:219791-219808 -
  11. scaffold_12855:9811013-9811030 +
  12. scaffold_12891:265938-265955 +
  13. scaffold_12932:1708190-1708207 -
  14. scaffold_12958:3489345-3489362 +
  15. scaffold_12970:407409-407426 -
  16. scaffold_12970:9212642-9212659 +
  17. scaffold_13047:4482834-4482851 -
  18. scaffold_13047:4485151-4485168 -
  19. scaffold_13281:4775-4792 -
star
  1. scaffold_129:274-294 +
  2. scaffold_7156:197-217 +
  3. scaffold_10111:10014-10034 +
  4. scaffold_12181:3583-3603 +
  5. scaffold_12181:10885-10905 +
  6. scaffold_12472:587970-587990 +
  7. scaffold_12726:1468788-1468808 +
  8. scaffold_12726:2692982-2693002 +
  9. scaffold_12855:8835274-8835294 +
  10. scaffold_12855:8842011-8842031 +
  11. scaffold_12855:8848532-8848552 +
  12. scaffold_12958:319561-319581 +
  13. scaffold_13045:631357-631377 +
  14. scaffold_13045:972127-972147 +
  15. scaffold_13045:973369-973389 +
  16. scaffold_13045:990198-990218 +
  17. scaffold_13049:5475171-5475191 +
  18. scaffold_13050:577666-577686 +
  19. scaffold_13324:1260990-1261010 +
  20. scaffold_13463:27-47 +
  21. scaffold_7121:5517-5537 -
  22. scaffold_12100:423907-423927 -
  23. scaffold_12100:428264-428284 -
  24. scaffold_12100:433269-433289 -
  25. scaffold_12100:436805-436825 -
  26. dvi_3249  scaffold_12855:219756-219776 -
  27. scaffold_12928:448608-448628 -
  28. scaffold_12937:106011-106031 -
  29. scaffold_12937:119064-119084 -
  30. scaffold_12954:1118886-1118906 -
  31. scaffold_12958:1010661-1010681 -
  32. scaffold_12958:3362729-3362749 -
  33. scaffold_12963:1415915-1415935 -
  34. scaffold_12963:3969033-3969053 -
  35. scaffold_12963:11414592-11414612 -
  36. scaffold_12963:14496174-14496194 -
  37. scaffold_13036:821232-821252 -
  38. scaffold_13042:940227-940247 -
  39. scaffold_13042:1746324-1746344 -
  40. scaffold_13049:19767290-19767310 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GATCTTCGTTAAGTATATATGTTCATGATCCGTATCAACAGCCCCCTCGATATAGCCATGCCCGTCTGTCCCTCTGTATGTTTCGATGCGAACTAGTCTCTCAGTTTTAAAGCTATCGTCATTTAATTTCATTCAATTCACTTTAATAAAATTAACATTTACATAAATATTTATTATTATATTATTTGACTCTAATTAAAGCTCGTGGATAAACTAAAGAGCGTGTACAAGAGCTGGACAGATGTGGACCT
*****************************************************............(((.....((((.(((......))).)).)).....)))..************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060678
9x140_testes_total
 SRR060656
9x160_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060679
140x9_testes_total
 V047
embryo
 M047
female body
 SRR060662
9x160_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060667
160_females_carcasses_total
......................................................................................................................................................................................................................................GAGCTGGACAGATGTGGAC.. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AATTAAAGCTCCTGGATAA....................................... 19 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TAAAGCTCCTGGATAAAAAAAA................................. 22 3 6 0.33 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................CCCTCTGTATGTGGCGATGTG................................................................................................................................................................. 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................AATTAAAGCTCCTGGATAC....................................... 19 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTTGACTCTTATTAAGGCT................................................ 19 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................GGAGCTCGTGGATAAACT.................................... 18 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................AAGACATGGTCAGATGTGGA... 20 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................TCCTCTGTATGTGGCGATG................................................................................................................................................................... 19 3 19 0.11 2 0 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................AATTAAAGCTCCTGGAAAA....................................... 19 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0
..............................................TCGATATAGCCATGCCCGTCTG....................................................................................................................................................................................... 22 0 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................AGCCATGCCCGTCTGTCC.................................................................................................................................................................................... 18 0 19 0.05 1 0 0 0 0 0 1 0 0 0 0 0
...............................................CGATATAGCCATGCCCGTCTTT...................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................TAAAGCTCCTGGATAAAAAA................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................GAACAAGAGATGGAAAGATG....... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................ATGCGAACTAGTCTCTCAGTT................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................ATTAGATCATTTTACTCTAA........................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................AAAGCTCCTGGATAAAAAAAA................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

CTAGAAGCAATTCATATATACAAGTACTAGGCATAGTTGTCGGGGGAGCTATATCGGTACGGGCAGACAGGGAGACATACAAAGCTACGCTTGATCAGAGAGTCAAAATTTCGATAGCAGTAAATTAAAGTAAGTTAAGTGAAATTATTTTAATTGTAAATGTATTTATAAATAATAATATAATAAACTGAGATTAATTTCGAGCACCTATTTGATTTCTCGCACATGTTCTCGACCTGTCTACACCTGGA
*************************************************************************************************************************************************............(((.....((((.(((......))).)).)).....)))..***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060665
9_females_carcasses_total
 V053
head
 SRR060679
140x9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060656
9x160_ovaries_total
 SRR060672
9x160_females_carcasses_total
 SRR060683
160_testes_total
 SRR060659
Argentina_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
..................TACAAGTAGGAGGCATAG....................................................................................................................................................................................................................... 18 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GAGATTAATTTCGTGGACCT.......................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AATAATTTCGAGGACCTA......................................... 18 2 9 0.22 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GATCAGAGAGTCAAAATTTCGATA....................................................................................................................................... 24 0 20 0.15 3 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0
...............................................GCTATATCGGTACGGGCAGAC....................................................................................................................................................................................... 21 0 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TAGATAATAATATAATAAA................................................................ 19 1 17 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ACCGAGGTTAATTTCGAGGA............................................. 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................TCAGAGAGTCAAAATTTCGATA....................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................ACGCTTGATCAGAGAGTCAAAATTTC........................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TGATCAGAGAGTCAAAATTTCGATA....................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................TGATCAGAGAGTCAAAATTTCGAT........................................................................................................................................ 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................ACGCTTGATCAGAGAGTCAAAATT............................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TAAATGCAAGGAAGTTAAGT............................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................ACGCTTGATCAGAGAGTCAAAATTT............................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................TTGGCGGCGGAGCTATAT..................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................TGATCAGAGAGTCAAAATTTCGATAG...................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................GATCAGAGAGTCAAAATTTCG.......................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................ATCAGAGAGTCAAAATTTCGATA....................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:219611-219861 - dvi_3249 GATCTTCG------TTAAGTATATATGTTCATGATCCGTATCAACAGCCCCCTCGATAT----AGCCATGCCCGTCTGTCCCTCTGTATGT------------TTCGATGCGAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCGTCATTTAATTT---------------------CAT---T----------------------------------------------------------------------CAATTCACTTTAATAAAATTA------------------------------------------------A---------------------------------------------------------------------CATTTACATAAATATTTATTA-TTATATTAT-----------------------------------------------TTGACTCTAATTAAAGCTCGTGGATAAAC-TAAAGAGCGTG-----------TACAAGAGCTGGACAG-A--TGTGGACCT
droMoj3 scaffold_6540:2342053-2342264 + CGTGACTGACTGCATTAAGTATATATTTTCCTGATTAGAGCCATGAGCTGAATCAATAA----AGCCATGTTCGTCTGTCAGTCTGTTAGCC------------CATATGAACGCTGAAATCTCAGAAGATAT--------------------AACAGCT-----AGAGACTTTAAATTT---------------------AGC---ATG---------------------CATACTCGTGTATACCAAAATTTCAA---------------------------------------------TTTTCTTTAAAAT-----------------------------------------------------------------------------------------------------------------ATATTTATTA-ATATGCCAA--------------------------------------------------T-----TTTAAA----------------------------------------------------------------GC
droGri2 scaffold_15245:10043876-10044065 - A-----------------GTATATATATACTTGATCAGATAAAATAAACTCTACGATAT----AGACATGTCCATCTGTTCGTCTATTTCTTAG---------------CCTAACTAATCCATCAG----TTT--------------------TTAAGTT-----ATCTTGATGAAACCTGAAGTCGATTCATTATTTTGTTGT-TT---------------------ATA-----------------------------TAT-------ATAA----T---------AT------------------------TTACTAGTTTT---------------------------------------------------------------------------------------------------------------------CTTTAT-----------------------------------------------TCAACTACTTTTCAA---------------------------------------------------G---------T--TC
droWil2 scf2_1100000004943:7265820-7266097 - CGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATGAGAAGCTAAGTCGATAT----AGCCATGTCCGTCTGTCAGTCTGTCCGTCTGTCCGTCGGTGCGTACGCGTTTTACTCAGCCAT----CTT--------------------AAGAGCT-----ATCGGGATGAAATTT---------------------TTT---TTG---------------------GGAGC------------------------------------------------------------------------------------------------------------TTT--TTTTTAC------CC--------------------------------------------GGG------------------------------------T----GAGATAAAGTATGAAAATCTTTGGGATCGGACTACTATATCATATAGCTCTAGAAGAAACATTTTCATAAAA-AATGGAGTATCGCTATGAA-----------ATTTACA---TATG-----TG
dp5 2:28143156-28143333 - CGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTG----AGCCATGTCTGTCTGTCCGTCTGTCCGTCCGT------------CCGT--------------------TT--------------------TGT---------------------------------------------------ATT---------------------CATTT-------------------------------------------------------------------------------------------------------------------------------------TATGTTATTTGTATTTGAATATAAAATATTATCACAGACACAATGT--T----------ATTTTTTTTT-TTTTAGTAT-----------------------------------------------------TTAA-----------------------------------------------------------------------
droPer2 scaffold_1206:3417-3664 - CGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTG----AGCCCTGTCTGTCTGTCCGTCCGTCCGTC------------TAGAG------------TT-------------------------------GCGGTGTCCGCAGCAACTCACAACGT---------------------TCCC--CCTCGTTTTCATTGAATTTCAGA-AAGTTTT----------------------------------------AAATTCCCTGAATCAAAAGTCAAACCTTATTGAAAAT-----------------------------------------------ATTTCATTATACCATCTGAATATGAA-----------------------------------------------------------------------------------------------------------------------------TTTGCTTATA--------CCTCA-----------CGCGCA---------AACGCGA-----GA
droAna3 scaffold_13757:39287-39496 - CATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATAT----GAGCATGTCCGTCTGTCTGTCTGTCGGT------------TTCTACGCAAACTAGTCTCTCAG----TTT--------------------TGGAGCT-----ATCGAGTTGAAACTT---------------------TGC---ACA---------------------CATCCTT-------------------------------------------------T-------------------------------------------------------------T-TTCCC--------------------------------------------------TTGCA-GGTAGTATATACGATAGTATAT------------------------------------------------ACGATTATATCCTATAGCTGTCATAGAA------------------------------------------------------------------
droBip1 scf7180000396401:7744-7967 - CATCTCCGACCATATAAAGTATATATATTCTTAATCAGGATCACCTCCTGAGTTGATAT----GAGCATGTCCGTCTGTCTGTCCGTCTGTCTGT--------TTCTACGCGAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCGACTTGATGTGT---------------------TGC---ATA---------------------TGGAAT------------------------------------------------------------------------------TT------GTACAC-----------------------------------------------------------------------------ACACA-TGTATTAT------------TTATTT-GTAC-----------ACACAC--AT----------------------------------GTAGACATAC-----------------------GCACA-----------CACATAAACCGA-AG---------AACCT
droKik1 scf7180000302356:15608-15912 - CGTTTCCGACCCTCTAAAGTATATATATTCTTGATCAGCATAAACAGCCGAGTCGATAT----AGCCATGTCCGTCTGTCCGTCTGTCCATCTGT------------CCATCTGTCCGTCTGTCCG----TCT--------------------GTCTGTT-----AATCGATTATTAATAGAAATAAAATTATAGCTTCGTTGT------------------TTTTCAACGTATTTTTATCTACTCTGAGA----------------------------------------TATAAT------TATTTTTATTAT-----------------------------------------------------------------------------------------------------------------TTATTTATTA-TTTTATTATTCTAGAATTTTGGTATAAATTTCATGAAAATCGGACAACTATATCATATAGCGGCCATAGGAGCGATCGGT------------------------------------------AG-ATGTA-----GA
droFic1 scf7180000453865:1118-1316 - ----------------------ATATATTCTTGATCAGCTTCACGATCTGAGTCGGAAT----ACGTCTGAACGTCTGTCCGCCTGTCCGTCTGTCTGT----TTCTCTTCAAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCTTGCTGAAACTT---------------------TTCC----------------------------------------------------AAAAGTTGTGAAT--------------------------------------------------------------------------------------------ATTATA-------------------------------------------------------------------------------T----A-------------------------------------------AGTCTCTAA--ATAAAATTTATATAAATTTATATACTGCG-----------TGCAAA---------AACTACA-----CA
droEle1 scf7180000491186:143903-144115 + CATTTCCGAGCCTATGAAGTATATATATTCTTGATCAGCATCACTAGGAGAGTCGATCT----AGCCATATCAGTCTGTCCATCTGTC----------------TCTACGCAACTTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCTGCT----------------------ATAAAAATGG-TT---------------------AAA-----------------------------TAT-------TTTA----C---------AA------------------------TTACTATT---------------------------------------------------------------------------------------------------------------------------------------------TAAATTTAATCAAAATCGGATGACTATAATATAAAGCTCCCATGGAAAAAATT---------------------------------------------------AA-----AA
droRho1 scf7180000770177:447456-447675 + CGTCTCCGTCCCTATAAAGTATATATATTCTTGATCAGCATCACCAGGCGAGTTGATCT----AACCATGTCCGTCTGTCAGGCTGAC-GT------------TTCTCCGCAACCTAATTTCTCTA----TTT--------------------TTATATT-----------------------------------------TGT---ATC---------------------CATTTTTCAAA------------------AA--------------AG------------------------------------------------------------------TCTGCT-TTCAT--------------------------------------------------TTGCA--------TGTAG-TAAATATGTATTA-CT-------------------------------------------------ATCATATTACTCCAATAGGAATAATCGAAA------------------------------ATAATAAAA-AG---------A--AC
droBia1 scf7180000301512:51707-51987 - CTTTTCCGACCCTATTGCGTATATATATTCTTGATCAGCATCACTAGACAAGTCCAATT----AGGCATGTCCGTCTATCCGTCCGTCCGTT------------T--ACGCAAACTAGTCTCTCAG----TTT--------------------AAAAGCT-----AAGTTTTTACCATAT---------------------AAC------------------------------------------------------------------------------------------------------------------------------------CTCCTAACATT--TTTTAAT------TTGGTC-------------------------------------------------------------------------------T----GAATTTTGAAATAAATTTTATCAAAATCGGACGTTTGTATCATATAGCTGCCATAGAAACGATCGAAAAATT-TGTGGGGAAATAATATGAAAAGTATAAGGGGTATAGAA-A--CGTCGGCTT
droTak1 scf7180000414256:10112-10352 - CCTTTCCGACCACATAAAGTATATATATTCTTGATCAGCACCAATAGCCGAGTCTATCT----AGCCATGTCCGTATGTCCGTCTGTCCGT------------TTCTATGCGAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCGCGATGAAACTT---------------------TCCC-----------------------GAA-----------------------------TGTT-------TCATT--CTATTGA-TTTATTTATATCA------------------------------------------------G---------------------------------------------------------------------GACTTAT-CAATTATGTATTGGCCGTTTTGT----TCGACCACTAATGACA-----------------------------------------ATCTCTCGG--------------------------------ACAGCTCGA-AG---------A--AC
droEug1 scf7180000408984:484448-484604 + CGTTTCCGACCCC--------------------ATCAGGATCAATAGGGGAGTCGATAT----AGCCATGTCCGTTTGTCCGTATGTCCGTATGTCTGTTTGTTTCAATACCGTTTGCGAGCTCAG----TTT--------------------AAAAGCT-----AGCGACTTAAAACTT---------------------TTAC--AGT---------------------CATCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------AACGTG---------TACGCAG-----AT
dm3 chr4:890776-890981 - CATTTCCGATTATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCAATGT----AGCCATGTCCATATGTCCGTATGAACGTC------------GAGGT------------TTTTTCTAGTCTA-------------ACGCCTTGAAGCC-----GCCGAACC----------------------------------------------------------------AGTCACTCCCACAATTTGGA----------A-----------------------------------AATTTTTAAAATTT------TTTTTCATTTTATTTCCCAAA--------------------------------------------------------------------------------------ATCTATTG-AT---------------------------------------------------------------ATA------------------------------------------------CCGA-AA---------AA-TG
droSim2 3l:19625745-19625957 + CGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCT----GGCCATGTCCGTCTATCTGTATCAACGTC------------GAGAT------------CTCAGGAACTATAGAAGCTTAAGATTCAGCATTCAGATT-----CTAGAGAC----------------------------------------------------------------TGCCACGCACACACTTTGCAAAAA--------------------------------------------TGTGTTGAATTT------GTTCAC---------------------------------------------------------------------------------------------------ATTTTTATTA-GTATCATAT-----------------------------------------------CTGGTTTTAA---------------------------------------------------------------------TT
droSec2 scaffold_11:1734941-1735073 - GACATTCG------TTAAGAATATATATTCTTGATCAGTACCAACAGCCGAGTCCACATACATAGCTATGTCCGTATGTCCTTACGTCCGT------------TTCTACGCAAACAAGTCTTTCAG----ATC--------------------TAAAGCA-----ACCTGCATACAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2h_random_005:751160-751363 + CGTTTCCGACCATA-----TATATATATTCTTGATCAGGATCAATAGCCGAGTCGATTT----GGCCATATCCGTCTGTCCGTCCGTCTGTCCGT------------CCGTC---TGCCTGCTTGT----TTA--------------------TGTAGTT-----AATTAGACTTATCTT---------TTGTTAAATCTTTGTT----------------------------------------------------AAAAGTTGGGAATTTTG----T---------GA------------------------TTG------TTTTTA------------------------------------------------------------------------------------------------------------A-TTCGATTTT-----------------------------------------------CCCA---CTATATGGAAAGCT---------------------------------------------------GG-----TG
droEre2 scaffold_4770:4945865-4946049 - ---------------------------TTCTTGATCA---TCAACACACATGTCGATAT----AGCCATGACCGTCTGTCCGTCCCTCCGT------------TTCGACACAATTTAGTCACTCTG----TTT--------------------TAATACT-----AAATTCATAAAACTC---------------------TTCT---AA---------------------A----------------------------AA--------------AG------------------------------------------------------------------TCTTCT-TTTAGGAAAATATTAGG----------------------------------------------------------AA-----------ATGT-----------------------------------------------------TGTCTCTAACCATAAAACTTGGTTAAGC-T------------------------------TAA-TG---TATA-----CA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GATCTTCG------TTAAGTATATATGTTCATGATCCGTATCAACAGCCCCCTCGATAT----AGCCATGCCCGTCTGTCCCTCTGTATGT------------TTCGATGCGAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCGTCATTTAATTT---------------------CAT---T----------------------------------------------------------------------CAATTCACTTTAATAAAATTA------------------------------------------------A---------------------------------------------------------------------CATTTACATAAATATTTATTA-TTATATTAT-----------------------------------------------TTGACTCTAATTAAAGCTCGTGGATAAAC-TAAAGAGCGTG-----------TACAAGAGCTGGACAG-A--TGTGGACCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGGACAG-A--TGTGGAC..1911.001000000000000000000000000000000000000000000000000000000000000010
....................................................TCGATAT----AGCCATGCCCGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.061000000000000000000001000000000000000000000000000000000000000000
...............................................................AGCCATGCCCGTCTGTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18190.051000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................ATGCGAACTAGTCTCTCAG----TT............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
CGTGACTGACTGCATTAAGTATATATTTTCCTGATTAGAGCCATGAGCTGAATCAATAA----AGCCATGTTCGTCTGTCAGTCTGTTAGCC------------CATATGAACGCTGAAATCTCAGAAGATAT--------------------AACAGCT-----AGAGACTTTAAATTT---------------------AGC---ATG---------------------CATACTCGTGTATACCAAAATTTCAA---------------------------------------------TTTTCTTTAAAAT-----------------------------------------------------------------------------------------------------------------ATATTTATTA-ATATGCCAA--------------------------------------------------T-----TTTAAA----------------------------------------------------------------GCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
A-----------------GTATATATATACTTGATCAGATAAAATAAACTCTACGATAT----AGACATGTCCATCTGTTCGTCTATTTCTTAG---------------CCTAACTAATCCATCAG----TTT--------------------TTAAGTT-----ATCTTGATGAAACCTGAAGTCGATTCATTATTTTGTTGT-TT---------------------ATA-----------------------------TAT-------ATAA----T---------AT------------------------TTACTAGTTTT---------------------------------------------------------------------------------------------------------------------CTTTAT-----------------------------------------------TCAACTACTTTTCAA---------------------------------------------------G---------T--TCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATGAGAAGCTAAGTCGATAT----AGCCATGTCCGTCTGTCAGTCTGTCCGTCTGTCCGTCGGTGCGTACGCGTTTTACTCAGCCAT----CTT--------------------AAGAGCT-----ATCGGGATGAAATTT---------------------TTT---TTG---------------------GGAGC------------------------------------------------------------------------------------------------------------TTT--TTTTTAC------CC--------------------------------------------GGG------------------------------------T----GAGATAAAGTATGAAAATCTTTGGGATCGGACTACTATATCATATAGCTCTAGAAGAAACATTTTCATAAAA-AATGGAGTATCGCTATGAA-----------ATTTACA---TATG-----TGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGATCGGACTACTATATCATATA..............................................................................2540.50200020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGGGATCGGACTACTATATCATA................................................................................2740.50201010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGATCGGACTACTATATCATA................................................................................2540.25100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGATCGGACTACTATAT....................................................................................2140.25100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTGGGATCGGACTACT........................................................................................2040.25101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTTTGGGATCGGACTACTAT......................................................................................2340.25101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGATCGGACTACTATATC...................................................................................2040.25100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTTTGGGATCGGACTACTATA.....................................................................................2540.25100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAAAA-AATGGAGTATCGCT.....................................2140.25100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGGATCGGACTACTATATCATA................................................................................2640.25100010
................................................TAAGTCGATAT----AGCCATGTCCGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTATGAAAATCTTTGGGA..................................................................................................22200.05101000
.................................................................................................................TTTACTCAGCCAT----CTT--------------------AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGTATCGCTATGAA-----------ATTTACA---TA.........26200.05100010
...................................................................................................................TACTCAGCCAT----CTT--------------------AAGAGCT-----ATCGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
...............................................................................................................................................................T-----ATCGGGATGAAATTT---------------------TTT---TTG---------------------GGA......................................................................................................................................................................................................................................................................................................................................................25200.05100010
dp5
CGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTG----AGCCATGTCTGTCTGTCCGTCTGTCCGTCCGT------------CCGT--------------------TT--------------------TGT---------------------------------------------------ATT---------------------CATTT-------------------------------------------------------------------------------------------------------------------------------------TATGTTATTTGTATTTGAATATAAAATATTATCACAGACACAATGT--T----------ATTTTTTTTT-TTTTAGTAT-----------------------------------------------------TTAA-----------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................TTGATCAGCATCAATAGCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3570000700000
............................................................................TGTCCGTCTGTCCGTCCGT------------CCGT--------------------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000100
..............................TTGATCAGCATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550000005000
.............................................................................GTCCGTCTGTCCGTCCGT------------CCGT--------------------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
..............................................................................TCCGTCTGTCCGTCCGT------------CCGT--------------------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510100000000
.........................................................TG----AGCCATGTCTGTCTGTCCGTCTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040000000040
.................................................GAGTCGATTG----AGCCATGTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000003000
.........................TATTCTTGATCAGCATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530300000000
.........................................................TG----AGCCATGTCTGTCTGTCCGTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530030000000
.........................................................TG----AGCCATGTCTGTCTGTCCGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000030
..............................TTGATCAGCATCAATAGCCGAGTCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530030000000
....................ATATATATTCTTGATCAGCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000200
.................................................GAGTCGATTG----AGCCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
...............................................CCGAGTCGATTG----AGCCATGTCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000000000
..........................................................................TCTGTCCGTCTGTCCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000100
..........................................................G----AGCCATGTCTGTCTGTCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000100
..............................................GCCGAGTCGATTG----AGCCATGTCTGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
...............................................................AGCCATGTCTGTCTGTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510001000000
droPer2
CGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTG----AGCCCTGTCTGTCTGTCCGTCCGTCCGTC------------TAGAG------------TT-------------------------------GCGGTGTCCGCAGCAACTCACAACGT---------------------TCCC--CCTCGTTTTCATTGAATTTCAGA-AAGTTTT----------------------------------------AAATTCCCTGAATCAAAAGTCAAACCTTATTGAAAAT-----------------------------------------------ATTTCATTATACCATCTGAATATGAA-----------------------------------------------------------------------------------------------------------------------------TTTGCTTATA--------CCTCA-----------CGCGCA---------AACGCGA-----GASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................TAGCCGAGTCGATTG----AGCCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
............................................TAGCCGAGTCGATTG----AGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
droAna3
CATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATAT----GAGCATGTCCGTCTGTCTGTCTGTCGGT------------TTCTACGCAAACTAGTCTCTCAG----TTT--------------------TGGAGCT-----ATCGAGTTGAAACTT---------------------TGC---ACA---------------------CATCCTT-------------------------------------------------T-------------------------------------------------------------T-TTCCC--------------------------------------------------TTGCA-GGTAGTATATACGATAGTATAT------------------------------------------------ACGATTATATCCTATAGCTGTCATAGAA------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................TAT----GAGCATGTCCGTCTGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153300000
........................................................TAT----GAGCATGTCCGTCTGTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153300000
.............................................................................................................................................................GCT-----ATCGAGTTGAAACTT---------------------TGC---A................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
..........................................................................................................................................................................GTTGAAACTT---------------------TGC---ACA---------------------CATCCTT-------------------------------------------------.................................................................................................................................................................................................................................................................................................23200.102200000
........................................................TAT----GAGCATGTCCGTCTGTCTGTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102200000
..............................................CCTGAGTCGATAT----GAGCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
..............................................CCTGAGTCGATAT----GAGCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATCCTATAGCTGTCAT......................................................................20200.051000010
..........................................................................................................................................................................GTTGAAACTT---------------------TGC---ACA---------------------CATC.....................................................................................................................................................................................................................................................................................................................................................20200.051100000
..............................................CCTGAGTCGATAT----GAGCATGTCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
....................................................TCGATAT----GAGCATGTCCGTCTGTCTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
.........................................CACCTCCTGAGTCGATAT----GAGCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
................................................................................TGTCTGTCGGT------------TTCTACGCAAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
droBip1
CATCTCCGACCATATAAAGTATATATATTCTTAATCAGGATCACCTCCTGAGTTGATAT----GAGCATGTCCGTCTGTCTGTCCGTCTGTCTGT--------TTCTACGCGAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCGACTTGATGTGT---------------------TGC---ATA---------------------TGGAAT------------------------------------------------------------------------------TT------GTACAC-----------------------------------------------------------------------------ACACA-TGTATTAT------------TTATTT-GTAC-----------ACACAC--AT----------------------------------GTAGACATAC-----------------------GCACA-----------CACATAAACCGA-AG---------AACCTSizeHit CountTotal NormTotal
No Reads
droKik1
CGTTTCCGACCCTCTAAAGTATATATATTCTTGATCAGCATAAACAGCCGAGTCGATAT----AGCCATGTCCGTCTGTCCGTCTGTCCATCTGT------------CCATCTGTCCGTCTGTCCG----TCT--------------------GTCTGTT-----AATCGATTATTAATAGAAATAAAATTATAGCTTCGTTGT------------------TTTTCAACGTATTTTTATCTACTCTGAGA----------------------------------------TATAAT------TATTTTTATTAT-----------------------------------------------------------------------------------------------------------------TTATTTATTA-TTTTATTATTCTAGAATTTTGGTATAAATTTCATGAAAATCGGACAACTATATCATATAGCGGCCATAGGAGCGATCGGT------------------------------------------AG-ATGTA-----GASizeHit CountTotal NormTotal
No Reads
droFic1
----------------------ATATATTCTTGATCAGCTTCACGATCTGAGTCGGAAT----ACGTCTGAACGTCTGTCCGCCTGTCCGTCTGTCTGT----TTCTCTTCAAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCTTGCTGAAACTT---------------------TTCC----------------------------------------------------AAAAGTTGTGAAT--------------------------------------------------------------------------------------------ATTATA-------------------------------------------------------------------------------T----A-------------------------------------------AGTCTCTAA--ATAAAATTTATATAAATTTATATACTGCG-----------TGCAAA---------AACTACA-----CASizeHit CountTotal NormTotal
No Reads
droEle1
CATTTCCGAGCCTATGAAGTATATATATTCTTGATCAGCATCACTAGGAGAGTCGATCT----AGCCATATCAGTCTGTCCATCTGTC----------------TCTACGCAACTTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCTGCT----------------------ATAAAAATGG-TT---------------------AAA-----------------------------TAT-------TTTA----C---------AA------------------------TTACTATT---------------------------------------------------------------------------------------------------------------------------------------------TAAATTTAATCAAAATCGGATGACTATAATATAAAGCTCCCATGGAAAAAATT---------------------------------------------------AA-----AASizeHit CountTotal NormTotal
No Reads
droRho1
CGTCTCCGTCCCTATAAAGTATATATATTCTTGATCAGCATCACCAGGCGAGTTGATCT----AACCATGTCCGTCTGTCAGGCTGAC-GT------------TTCTCCGCAACCTAATTTCTCTA----TTT--------------------TTATATT-----------------------------------------TGT---ATC---------------------CATTTTTCAAA------------------AA--------------AG------------------------------------------------------------------TCTGCT-TTCAT--------------------------------------------------TTGCA--------TGTAG-TAAATATGTATTA-CT-------------------------------------------------ATCATATTACTCCAATAGGAATAATCGAAA------------------------------ATAATAAAA-AG---------A--ACSizeHit CountTotal NormTotal
No Reads
droBia1
CTTTTCCGACCCTATTGCGTATATATATTCTTGATCAGCATCACTAGACAAGTCCAATT----AGGCATGTCCGTCTATCCGTCCGTCCGTT------------T--ACGCAAACTAGTCTCTCAG----TTT--------------------AAAAGCT-----AAGTTTTTACCATAT---------------------AAC------------------------------------------------------------------------------------------------------------------------------------CTCCTAACATT--TTTTAAT------TTGGTC-------------------------------------------------------------------------------T----GAATTTTGAAATAAATTTTATCAAAATCGGACGTTTGTATCATATAGCTGCCATAGAAACGATCGAAAAATT-TGTGGGGAAATAATATGAAAAGTATAAGGGGTATAGAA-A--CGTCGGCTTSizeHit CountTotal NormTotal
No Reads
droTak1
CCTTTCCGACCACATAAAGTATATATATTCTTGATCAGCACCAATAGCCGAGTCTATCT----AGCCATGTCCGTATGTCCGTCTGTCCGT------------TTCTATGCGAACTAGTCTCTCAG----TTT--------------------TAAAGCT-----ATCGCGATGAAACTT---------------------TCCC-----------------------GAA-----------------------------TGTT-------TCATT--CTATTGA-TTTATTTATATCA------------------------------------------------G---------------------------------------------------------------------GACTTAT-CAATTATGTATTGGCCGTTTTGT----TCGACCACTAATGACA-----------------------------------------ATCTCTCGG--------------------------------ACAGCTCGA-AG---------A--ACSizeHit CountTotal NormTotal
No Reads
droEug1
CGTTTCCGACCCC--------------------ATCAGGATCAATAGGGGAGTCGATAT----AGCCATGTCCGTTTGTCCGTATGTCCGTATGTCTGTTTGTTTCAATACCGTTTGCGAGCTCAG----TTT--------------------AAAAGCT-----AGCGACTTAAAACTT---------------------TTAC--AGT---------------------CATCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------AACGTG---------TACGCAG-----ATSizeHit CountTotal NormTotal
No Reads
dm3
CATTTCCGATTATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCAATGT----AGCCATGTCCATATGTCCGTATGAACGTC------------GAGGT------------TTTTTCTAGTCTA-------------ACGCCTTGAAGCC-----GCCGAACC----------------------------------------------------------------AGTCACTCCCACAATTTGGA----------A-----------------------------------AATTTTTAAAATTT------TTTTTCATTTTATTTCCCAAA--------------------------------------------------------------------------------------ATCTATTG-AT---------------------------------------------------------------ATA------------------------------------------------CCGA-AA---------AA-TGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................TGTCCGTATGAACGTC------------GAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2063.33200000000000000000000000110000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000040010000100200000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000002100000000200000000000000000000000000
............................................................................TGTCCGTATGAACGTC------------GAGGT------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2162.83170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000001103300000000000000010100010000000000000000100000000000000000000000000010000010000000000000000100000000000000000000000000000000000
..............................TTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23202.705400200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTGATCAGGATCAATAGCCGAGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2542.2590000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TCCGTATGAACGTC------------GAGGT------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1982.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000015800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGGATCAATAGCCGAGTCAATGT----AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GTCCGTATGAACGTC------------GAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1981.38110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000310000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCCCAAA--------------------------------------------------------------------------------------ATCTATTG-AG---------------------------------------------------------------G.......................................................................1841.2550000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............................................................................TCCGTATGAACGTC------------GAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1881.1390000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000010000000
.................................................GAGTCAATGT----AGCCATGTCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CCAAA--------------------------------------------------------------------------------------ATCTATTG-AT---------------------------------------------------------------ATA------------------------------------------------.....................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAGGATCAATAGCCGAGTCAATGT----AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................T----AGCCATGTCCATATGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GTCCGTATGAACGTC------------GAGGT------------TTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................CAATAGCCGAGTCAATGT----AGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CGCCTTGAAGCC-----GCCGAACC----------------------------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................TCTA-------------ACGCCTTGAAGCC-----GCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................ATGTCCGTATGAACGTC------------GAGGT------------TTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................TATGTCCGTATGAACGTC------------GAGGT------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................TCCATATGTCCGTATGAACGTC------------GAGGT------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................ACC----------------------------------------------------------------AGTCACTCCCACAATTTGGA----------A-----------------------------------AA...............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CAATAGCCGAGTCAATGT----AGCCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................TTGATCAGGATCAATAGCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.85170000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000040000000000000000000000000000000000000000000000000000000003000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TATGTCCGTATGAACGTC------------GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................GTCCGTATGAACGTC------------GAGGT------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................TGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TCCGTATGAACGTC------------GAGGT------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGTCCGTATGAACGTC------------GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAAAGTATATATATTCTTGATCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000010000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................TCTTGATCAGGATCAATAGCCGAGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTGATCAGGATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3060000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTTCCGATTATATAAAGTATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTTCCGATTATATAAAGTATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTGATCAGGATCAATAGCCGAGTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAAAGTATATATATTCTTGATCAGGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGTCCGTATGAACGTC------------GAGGT------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000020000000
...............................TGATCAGGATCAATAGCCGAGTCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCTTGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000200000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTTGATCAGGATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATTATATAAAGTATATATATTCTTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000
................AAGTATATATATTCTTGATCAGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.............................CTTGATCAGGATCAATAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTTGATCAGGATCAATAGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTATATAAAGTATATATATTCTTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTATATAAAGTATATATATTCTTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTTCCGATTATATAAAGTATATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCTTGATCAGGATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTTGATCAGGATCAATAGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
............................TCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATATATATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..............TAAAGTATATATATTCTTGATCAGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAGGATCAATAGCCGAGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................TCCGTATGAACGTC------------GAGGT------------TTTTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGGATCAATAGCCGAGTCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGTCCGTATGAACGTC------------GAGGA------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGTCCGTATGAACGTC------------GAGGC------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
......................................GATCAATAGCCGAGTCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATATATTCTTGATCAGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TATATATATTCTTGATCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
..................GTATATATATTCTTGATCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGGATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GTCCGTATGAACGTC------------GAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAGGATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................TATATATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTGATCAGGATCAATAGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000
..............TAAAGTATATATATTCTTGATCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCTTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TATATATTCTTGATCAGGATCAATAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................TATATATATTCTTGATCAGGATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............TATAAAGTATATATATTCTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................TTCTTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATTCTTGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTTGATCAGGATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TATATTCTTGATCAGGATCAATAGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TATATATATTCTTGATCAGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............TAAAGTATATATATTCTTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCTTGATCAGGATCAATAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........TATATAAAGTATATATATTCTTGATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAAGTATATATATTCTTGATCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATTCTTGATCAGGATCAATAGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATAAAGTATATATATTCTTGATCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TATATATTCTTGATCAGGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........TATATAAAGTATATATATTCTTGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATATTCTTGATCAGGATCAATAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................ATCAGGATCAATAGCCGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.......................TATATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................TATTCTTGATCAGGATCAATAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTTGATCAGGATCAATAGCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATATTCTTGATCAGGATCAATAGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATTCTTGATCAGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATATATATTCTTGATCAGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................TATATATTCTTGATCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TATATTCTTGATCAGGATCAATAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATATTCTTGATCAGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
droSim2
CGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCT----GGCCATGTCCGTCTATCTGTATCAACGTC------------GAGAT------------CTCAGGAACTATAGAAGCTTAAGATTCAGCATTCAGATT-----CTAGAGAC----------------------------------------------------------------TGCCACGCACACACTTTGCAAAAA--------------------------------------------TGTGTTGAATTT------GTTCAC---------------------------------------------------------------------------------------------------ATTTTTATTA-GTATCATAT-----------------------------------------------CTGGTTTTAA---------------------------------------------------------------------TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................C------------GAGAT------------CTCAGGAACTATAGAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................241146.00146000000102142820000000
...........................................................................................C------------GAGAT------------CTCAGGAACTATAGAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................25139.00390000002101800000000
...........................................................................................................................CAGGAACTATAGAAGCTTAAGATTC............................................................................................................................................................................................................................................................................................................................................................................................................................................25127.0027000000233100000000
............................TCTTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25207.9515900000014900010000000
...........................................................................................C------------GAGAT------------CTCAGGAACTATAGAAGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.00700000060100000000
..........................................................................................................GAT------------CTCAGGAACTATAGAAGCTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000000000
...........................................................................................................................CAGGAACTATAGAAGCTTAAGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000011000000000
............................................................................................................T------------CTCAGGAACTATAGAAGCTTAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000200000000
..........................................................................................................GAT------------CTCAGGAACTATAGAAGCTTAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000200000000
..................GTATATATATTCTTGATCAGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.6533000000305025000000
................................................CGAGTCGATCT----GGCCATGTCCGTCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.50300000000201000000
...........................................................................................C------------GAGAT------------CTCAGGAACTATAGAAGCTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
..........................................................................................................................TCAGGAACTATAGAAGCTTAAGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...........................................................................................................................CAGGAACTATAGAAGCTTAAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
....................................................................TGTCCGTCTATCTGTATCAACGTC------------GAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.00200000010100000000
..........................................................................................................................TCAGGAACTATAGAAGCTTAAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...........................................................................................................................CAGGAACTATAGAAGCTTAAGATTCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...........................................................................................................................CAGGAACTATAGAAGCTTAAGATTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................AT------------CTCAGGAACTATAGAAGCTTAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
...........................................................................................................................CAGGAACTATAGAAGCTTAAGATTCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..........................................................................................................................TCAGGAACTATAGAAGCTTAAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000010000
.................................................................................................................................................TTCAGCATTCAGATT-----CTAGAGAC----------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................2331.00300000001101000000
...........................TTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.9519000000000019000000
................................................CGAGTCGATCT----GGCCATGTCCGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.9519002000010115000000
.........................................CAATAGCCGAGTCGATCT----GGCCATGTCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.9519000001900000000000
...........................................................................................C------------GAGAT------------CTCAGGAACTATAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.67200000011000000000
..................GTATATATATTCTTGATCAGGATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.6513000000000010003000
..........................ATTCTTGATCAGGATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.6012000000000012000000
..................GTATATATATTCTTGATCAGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.5010000000001000000000
...................................CAGGATCAATAGCCGAGTCGATCT----GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.501000000035001010000
......................................................................TCCGTCTATCTGTATCAACGTC------------GAGAT------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
....................................................................TGTCCGTCTATCTGTATCAACGTC------------GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000001000000000
........................ATATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.5010000000000010000000
............................................................................................................................AGGAACTATAGAAGCTTAAGATTC............................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000010000000000
................................................CGAGTCGATCT----GGCCATGTCCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.501000000001008010000
................................................................GCCATGTCCGTCTATCTGTATCAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000100000000
.................................................................................................................................CTATAGAAGCTTAAGATTCAGCATT......................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000100000000
...........................................................................................C------------GAGAT------------CTCAGGAACTATAGAAGCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.45900000010800000000
..................................TCAGGATCAATAGCCGAGTCGATCT----GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.45900000002000070000
...........................................................................................C------------GAGAT------------CTCAGGAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.40800000060002000000
........................................TCAATAGCCGAGTCGATCT----GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.35700010051000000000
....................ATATATATTCTTGATCAGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.35700000000006010000
.................................................................................................................................................TTCAGCATTCAGATT-----CTAGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100000001000000000
......................................................................................AACGTC------------GAGAT------------CTCAGGAACTATAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000010000000000
...................TATATATATTCTTGATCAGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.30600020000004000000
............................TCTTGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25500000040100000000
..............................TTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.25500000040010000000
....................ATATATATTCTTGATCAGGATCAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25500000002000030000
................................GATCAGGATCAATAGCCGAGTCGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25500000000005000000
...................................CAGGATCAATAGCCGAGTCGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.20400000000400000000
.........................TATTCTTGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.20400000013000000000
..................GTATATATATTCTTGATCAGGATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.20400000002200000000
..............TAAAGTATATATATTCTTGATCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.20400000000400000000
.............................CTTGATCAGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.20400000000004000000
........................ATATTCTTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.15300000030000000000
................................................CGAGTCGATCT----GGCCATGTCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15300000000003000000
...................................CAGGATCAATAGCCGAGTCGATCT----.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300000000030000000
..........................................................................................................................TCAGGAACTATAGAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................17190.11200000000110000000
.....................TATATATTCTTGATCAGGATCAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000200000000
.................................ATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
...........................TTCTTGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000002000000000
.............................................AGCCGAGTCGATCT----GGCCATGTCCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000200000000
.........................................................................................GTC------------GAGAT------------CTCAGGAACTATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200000002000000000
..............................TTGATCAGGATCAATAGCCGAGTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000011000000
..................................TCAGGATCAATAGCCGAGTCGATCT----GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000010000001000
.....................TATATATTCTTGATCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000020000000000
...........................TTCTTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10201100000000000000
..............................................GCCGAGTCGATCT----GGCCATGTCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000001010000
..................................TCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
.........................................CAATAGCCGAGTCGATCT----.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.10200000000002000000
..................GTATATATATTCTTGATCAGGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000000000002000
..................................TCAGGATCAATAGCCGAGTCGATCT----G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200000000001010000
..............................................GCCGAGTCGATCT----GGCCATGTCCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200000000020000000
.........................................CAATAGCCGAGTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
.................................ATCAGGATCAATAGCCGAGTCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000020000000000
..........................................................................................................GAT------------CTCAGGAACTATAGAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.09100000000001000000
...........................................................................................................................CAGGAACTATAGAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................17180.06100000000001000000
.........................................CAATAGCCGAGTCGATCT----GGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
.........................................CAATAGCCGAGTCGATCT----GGCCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
....TCCGACCATATAAAGTATATATATTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000100000000
...........................................................................................................................CAGGAACTATAGAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
.....................TATATATTCTTGATCAGGATCAATAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000100000000
....................................AGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
............................................TAGCCGAGTCGATCT----GGCCATGTCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000001000000
...............................TGATCAGGATCAATAGCCGAGTCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000000010000
........................ATATTCTTGATCAGGATCAATAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000010000000000
....................................AGGATCAATAGCCGAGTCGATCT----GGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000001000000000
...................................CAGGATCAATAGCCGAGTCGATCT----GGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000000010000
...........................TTCTTGATCAGGATCAATAGCCGAGTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000010000000000
........................................TCAATAGCCGAGTCGATCT----GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000000000
.........................................CAATAGCCGAGTCGATCT----GGCCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000001000000
...................................CAGGATCAATAGCCGAGTCGATCT----GGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05110000000000000000
.........................................................................................GTC------------GAGAT------------CTCAGGAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000000000000000
...................................................GTCGATCT----GGCCATGTCCGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
................................................CGAGTCGATCT----GGCCATGTCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
.......................................................ATCT----GGCCATGTCCGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.....................TATATATTCTTGATCAGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000100000000
.............................................AGCCGAGTCGATCT----GGCCATGTCCGTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000010000000000
.........................TATTCTTGATCAGGATCAATAGCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000001000000
.........................................CAATAGCCGAGTCGATCT----GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000001000000000
..................................TCAGGATCAATAGCCGAGTCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000001000000000
...........................TTCTTGATCAGGATCAATAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000000001000
..TTTCCGACCATATAAAGTATATATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000100000000
....................................AGGATCAATAGCCGAGTCGATCT----GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000001000000000
...........................TTCTTGATCAGGATCAATAGCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000000000
......................................................................................AACGTC------------GAGAT------------CTCAGGAACTATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000001000000
..........................................AATAGCCGAGTCGATCT----G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110000000000000000
..............................................GCCGAGTCGATCT----GGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
.............................CTTGATCAGGATCAATAGCCGAGTCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000010000000000
...........................................ATAGCCGAGTCGATCT----GGCCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
.........................................CAATAGCCGAGTCGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000010000000000
..........................................AATAGCCGAGTCGATCT----GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000001000000
..........................ATTCTTGATCAGGATCAATAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000000000
droSec2
GACATTCG------TTAAGAATATATATTCTTGATCAGTACCAACAGCCGAGTCCACATACATAGCTATGTCCGTATGTCCTTACGTCCGT------------TTCTACGCAAACAAGTCTTTCAG----ATC--------------------TAAAGCA-----ACCTGCATACAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CGTTTCCGACCATA-----TATATATATTCTTGATCAGGATCAATAGCCGAGTCGATTT----GGCCATATCCGTCTGTCCGTCCGTCTGTCCGT------------CCGTC---TGCCTGCTTGT----TTA--------------------TGTAGTT-----AATTAGACTTATCTT---------TTGTTAAATCTTTGTT----------------------------------------------------AAAAGTTGGGAATTTTG----T---------GA------------------------TTG------TTTTTA------------------------------------------------------------------------------------------------------------A-TTCGATTTT-----------------------------------------------CCCA---CTATATGGAAAGCT---------------------------------------------------GG-----TGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................TT----GGCCATATCCGTCTGTCCGTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000000000
..........................................................................TCTGTCCGTCCGTCTGTCCGT------------CCGTC---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.20400400000000
..............................................................................TCCGTCCGTCTGTCCGT------------CCGTC---TGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100100000000
.........................................CAATAGCCGAGTCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.10200000000002
..................................TCAGGATCAATAGCCGAGTCGATTT----G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
...............................................................GGCCATATCCGTCTGTCCGTCCGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.08101000000000
..........................ATTCTTGATCAGGATCAATAGCCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100100000000
..........................................................T----GGCCATATCCGTCTGTCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
..........................................................T----GGCCATATCCGTCTGTCCGTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
............TA-----TATATATATTCTTGATCAGGATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
.....................................................................................GTCTGTCCGT------------CCGTC---TGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110000000000
droEre2
---------------------------TTCTTGATCA---TCAACACACATGTCGATAT----AGCCATGACCGTCTGTCCGTCCCTCCGT------------TTCGACACAATTTAGTCACTCTG----TTT--------------------TAATACT-----AAATTCATAAAACTC---------------------TTCT---AA---------------------A----------------------------AA--------------AG------------------------------------------------------------------TCTTCT-TTTAGGAAAATATTAGG----------------------------------------------------------AA-----------ATGT-----------------------------------------------------TGTCTCTAACCATAAAACTTGGTTAAGC-T------------------------------TAA-TG---TATA-----CASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 09:38 PM