ID:

dvi_323

 Coordinate:

scaffold_12151:2760-2834 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.7 -27.7 -27.7

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
R1_DViLINER1-
mature
  1. scaffold_703:166-185 -
  2. scaffold_924:692-711 -
  3. scaffold_1631:990-1009 -
  4. scaffold_5404:725-744 -
  5. scaffold_6278:310-329 -
  6. scaffold_7393:170-189 -
  7. scaffold_9973:1709-1728 -
  8. scaffold_10076:2470-2489 -
  9. scaffold_10175:6530-6549 -
  10. scaffold_12564:248-267 -
  11. scaffold_12943:154629-154648 -
  12. scaffold_13036:67403-67422 -
  13. scaffold_13341:42312-42331 -
  14. scaffold_13341:47562-47581 -
  15. scaffold_13341:58330-58349 -
  16. scaffold_13341:100601-100620 -
  17. scaffold_13341:156521-156540 -
  18. scaffold_13353:11762-11781 -
  19. scaffold_13353:16965-16984 -
  20. scaffold_13353:27482-27501 -
  21. scaffold_1552:977-996 +
  22. scaffold_2359:240-259 +
  23. scaffold_3859:245-264 +
  24. scaffold_6268:378-397 +
  25. scaffold_6869:1950-1969 +
  26. scaffold_7415:1892-1911 +
  27. scaffold_8200:194-213 +
  28. scaffold_8345:485-504 +
  29. scaffold_9276:1166-1185 +
  30. scaffold_9384:717-736 +
  31. scaffold_9588:832-851 +
  32. scaffold_9588:5545-5564 +
  33. scaffold_9646:2922-2941 +
  34. scaffold_9708:2952-2971 +
  35. scaffold_11537:345-364 +
  36. scaffold_11747:289-308 +
  37. scaffold_12428:924-943 +
  38. dvi_412  scaffold_13036:227994-228013 +
  39. dvi_312  scaffold_13036:246314-246333 +
  40. scaffold_13036:431537-431556 +
  41. scaffold_1634:576-595 +
  42. scaffold_1778:96-115 +
  43. scaffold_2103:136-155 +
  44. scaffold_3264:150-169 +
  45. dvi_305  scaffold_5977:2381-2400 +
  46. scaffold_6096:786-805 +
  47. scaffold_6607:98-117 +
  48. scaffold_7517:371-390 +
  49. scaffold_8751:756-775 +
  50. scaffold_8793:888-907 +
  51. scaffold_8941:118-137 +
  52. scaffold_11600:174-193 +
  53. scaffold_11909:785-804 +
  54. scaffold_12737:2968-2987 +
  55. scaffold_12943:41023-41042 +
  56. scaffold_12944:2657-2676 +
  57. scaffold_12944:40365-40384 +
  58. scaffold_13036:263093-263112 +
  59. scaffold_13036:291520-291539 +
  60. scaffold_13546:74879-74898 +
  61. dvi_308  scaffold_375:1911-1930 +
  62. scaffold_375:4380-4399 +
  63. scaffold_680:867-886 +
  64. scaffold_1553:678-697 +
  65. scaffold_2049:251-270 +
  66. scaffold_2878:1041-1060 +
  67. scaffold_2986:824-843 +
  68. scaffold_5784:1799-1818 +
  69. scaffold_5978:625-644 +
  70. scaffold_6028:13-32 +
  71. scaffold_6770:2334-2353 +
  72. scaffold_7061:58-77 +
  73. scaffold_7539:628-647 +
  74. scaffold_7632:97-116 +
  75. scaffold_7899:1084-1103 +
  76. scaffold_8649:188-207 +
  77. scaffold_9500:1099-1118 +
  78. scaffold_11651:205-224 +
  79. scaffold_13290:1329-1348 +
  80. scaffold_13546:41383-41402 +
  81. scaffold_2097:1171-1190 -
  82. scaffold_2358:738-757 -
  83. scaffold_5990:1016-1035 -
  84. scaffold_7203:838-857 -
  85. scaffold_7503:369-388 -
  86. scaffold_8775:2104-2123 -
  87. scaffold_9229:967-986 -
  88. dvi_205  scaffold_9488:3476-3495 -
  89. scaffold_10719:536-555 -
  90. scaffold_10785:689-708 -
  91. scaffold_12268:3389-3408 -
  92. scaffold_12528:232641-232660 -
  93. scaffold_12528:266865-266884 -
  94. scaffold_12731:16644-16663 -
  95. dvi_313  scaffold_12824:37489-37508 -
  96. scaffold_12860:38927-38946 -
  97. dvi_325  scaffold_12954:766868-766887 -
  98. scaffold_13050:450850-450869 -
  99. scaffold_13341:31847-31866 -
  100. scaffold_13546:32104-32123 -
  101. scaffold_1135:246-265 +
  102. scaffold_2887:101-120 +
  103. scaffold_7652:1185-1204 +
  104. scaffold_9605:2879-2898 +
  105. scaffold_13546:69632-69651 +
  106. scaffold_771:10-29 +
  107. dvi_299  scaffold_1547:992-1011 +
  108. scaffold_7016:3265-3284 +
  109. scaffold_7537:92-111 +
  110. scaffold_9977:3999-4018 +
  111. scaffold_12737:41139-41158 +
  112. scaffold_12844:35646-35665 +
  113. scaffold_12943:3133-3152 +
  114. scaffold_13546:84549-84568 +
  115. scaffold_1776:1447-1466 -
  116. scaffold_9043:974-993 -
  117. scaffold_9401:1163-1182 -
  118. scaffold_9460:4708-4727 -
  119. scaffold_9614:3594-3613 -
  120. scaffold_10543:758-777 -
  121. scaffold_10819:303-322 -
  122. scaffold_12720:3978-3997 -
  123. scaffold_12731:12053-12072 -
  124. scaffold_13341:161426-161445 -
  125. scaffold_13546:3959-3978 -
  126. scaffold_702:137-156 -
  127. scaffold_911:1048-1067 -
  128. scaffold_918:941-960 -
  129. scaffold_2987:1251-1270 -
  130. scaffold_4968:198-217 -
  131. scaffold_8201:852-871 -
  132. scaffold_8594:1308-1327 -
  133. scaffold_8828:1696-1715 -
  134. scaffold_8979:809-828 -
  135. scaffold_9560:3970-3989 -
  136. scaffold_11721:1052-1071 -
  137. scaffold_12668:942-961 -
  138. scaffold_13339:1256-1275 -
  139. scaffold_13341:71204-71223 -
  140. scaffold_13341:105859-105878 -
  141. scaffold_13341:151440-151459 -
  142. scaffold_13353:6523-6542 -
  143. scaffold_681:960-979 +
  144. scaffold_2096:460-479 +
  145. scaffold_2361:770-789 +
  146. scaffold_2377:1929-1948 +
  147. scaffold_2388:771-790 +
  148. scaffold_2985:628-647 +
  149. scaffold_3858:444-463 +
  150. scaffold_7315:867-886 +
  151. scaffold_7670:862-881 +
  152. scaffold_8207:791-810 +
  153. scaffold_8788:1329-1348 +
  154. scaffold_9377:2253-2272 +
  155. scaffold_9456:1508-1527 +
  156. scaffold_9494:2904-2923 +
  157. scaffold_9510:607-626 +
  158. dvi_306  scaffold_9969:1663-1682 +
  159. scaffold_9972:3328-3347 +
  160. scaffold_9977:2335-2354 +
  161. scaffold_10742:612-631 +
  162. scaffold_12808:37832-37851 +
  163. scaffold_3367:546-565 +
  164. scaffold_6250:350-369 +
  165. scaffold_7574:272-291 +
  166. scaffold_7695:322-341 +
  167. scaffold_8218:907-926 +
  168. scaffold_9055:653-672 +
  169. scaffold_9484:1521-1540 +
  170. scaffold_10717:636-655 +
  171. scaffold_10763:424-443 +
  172. scaffold_13036:184786-184805 +
  173. scaffold_13546:111021-111040 +
  174. scaffold_1549:1078-1097 +
  175. dvi_311  scaffold_5047:1271-1290 +
  176. scaffold_7645:798-817 +
  177. scaffold_8022:824-843 +
  178. scaffold_9491:873-892 +
  179. scaffold_12737:45443-45462 +
  180. scaffold_12970:492140-492159 +
  181. scaffold_13036:266738-266757 +
  182. scaffold_1632:961-980 +
  183. scaffold_2362:64-83 +
  184. scaffold_2984:114-133 +
  185. scaffold_6027:755-774 +
  186. scaffold_8488:1563-1582 +
  187. scaffold_10932:588-607 +
  188. scaffold_2383:282-301 +
  189. scaffold_3071:277-296 +
  190. scaffold_11637:821-840 +
  191. scaffold_1630:15-34 -
  192. scaffold_1775:922-941 -
  193. dvi_323  scaffold_12151:2815-2834 -
  194. dvi_320  scaffold_12785:42191-42210 -
star
  1. dvi_308  scaffold_375:1936-1962 +
  2. scaffold_375:4405-4431 +
  3. scaffold_680:892-918 +
  4. dvi_299  scaffold_1547:1017-1043 +
  5. scaffold_1814:14-40 +
  6. scaffold_2878:1066-1092 +
  7. dvi_311  scaffold_5047:1296-1322 +
  8. scaffold_7016:3290-3316 +
  9. scaffold_8022:849-875 +
  10. dvi_310  scaffold_9382:496-522 +
  11. scaffold_9500:1124-1150 +
  12. scaffold_9977:4024-4050 +
  13. scaffold_12737:41164-41190 +
  14. scaffold_12844:35671-35697 +
  15. scaffold_12943:3158-3184 +
  16. scaffold_12943:7860-7886 +
  17. dvi_412  scaffold_13036:228019-228045 +
  18. scaffold_13036:251242-251268 +
  19. scaffold_13036:301474-301500 +
  20. scaffold_13546:41408-41434 +
  21. scaffold_1776:1415-1441 -
  22. scaffold_5990:984-1010 -
  23. scaffold_7203:806-832 -
  24. scaffold_7503:337-363 -
  25. scaffold_8775:2072-2098 -
  26. scaffold_9401:1131-1157 -
  27. scaffold_10543:726-752 -
  28. scaffold_10719:504-530 -
  29. scaffold_10785:657-683 -
  30. scaffold_10819:271-297 -
  31. scaffold_12268:3357-3383 -
  32. scaffold_12528:232609-232635 -
  33. scaffold_12528:266833-266859 -
  34. scaffold_12731:12021-12047 -
  35. scaffold_12731:16612-16638 -
  36. scaffold_13341:105827-105853 -
  37. scaffold_13341:151408-151434 -
  38. scaffold_13341:161394-161420 -
  39. scaffold_13546:3927-3953 -
  40. scaffold_13546:32072-32098 -
  41. scaffold_1552:1002-1028 +
  42. scaffold_2359:265-291 +
  43. scaffold_7415:1917-1943 +
  44. scaffold_7652:1210-1236 +
  45. scaffold_9276:1191-1217 +
  46. scaffold_9494:2929-2955 +
  47. scaffold_9588:857-883 +
  48. scaffold_9588:5570-5596 +
  49. scaffold_9605:2904-2930 +
  50. scaffold_9708:2977-3003 +
  51. dvi_306  scaffold_9969:1688-1714 +
  52. dvi_312  scaffold_13036:246339-246365 +
  53. scaffold_13546:69657-69683 +
  54. scaffold_681:985-1011 +
  55. scaffold_1548:1095-1121 +
  56. scaffold_9456:1533-1559 +
  57. scaffold_10742:637-663 +
  58. scaffold_13036:184811-184837 +
  59. scaffold_9229:935-961 -
  60. dvi_323  scaffold_12151:2782-2808 -
  61. dvi_309  scaffold_12245:897-923 -
  62. dvi_320  scaffold_12785:42159-42185 -
  63. dvi_305  scaffold_5977:2406-2432 +
  64. scaffold_8218:932-958 +
  65. scaffold_9484:1546-1572 +
  66. scaffold_10763:449-475 +

Sense Strand Reads

TACATTTGCCGGCAGCCCGACCAGACTTTGGGTTTCGGCCTGAGTCTTGATTCCTGTTGACTGGTCACGGGTTCCCTCAATGCATTCCTGCATTCGAGGAACCCTTTATGACAGTCCCAGAATGCCCGTTGTGGCTCCGCCTGCTGAAACATGGGNNNNNNNNNNNNNNNNNNNN
***********************************((((..((((....))))..))))((((.(((.(((((((.((((((((....)))))).)))))))))....)))))))...********************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 V053
head
 M027
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060679
140x9_testes_total
 M061
embryo
 SRR060678
9x140_testes_total
 SRR060674
9x140_ovaries_total
 M047
female body
 SRR060685
9xArg_0-2h_embryos_total
 M028
head
 SRR060654
160x9_ovaries_total
 SRR1106722
embryo_10-12h
........................................TCAGTCTTGATTTCTGTTGGC.................................................................................................................. 21 3 5 2.20 11 0 0 0 0 4 0 2 0 3 0 2 0 0 0 0 0 0
..................................................TTCCTGTTGACTGGTCACGG......................................................................................................... 20 0 20 1.30 26 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTCCTGTTGACTGGTCACGGG........................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GGAACCCTTGATGGCAGTCC.......................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTCCTGTTGACTGGTCACGGGTACG.................................................................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGATTCCTGTTGACTGGTCAC........................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................CTTGATTCCTGTTGACTGGTCACGGTT....................................................................................................... 27 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................TTGATTCCTGTTGACTGGTCACGG......................................................................................................... 24 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................GTGGTCGCGGGTTCCCTC................................................................................................. 18 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTCCTGTTGACTGGTCACGGCTT...................................................................................................... 23 1 8 0.25 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0
.............................................CTGGATTCCTGTTGACTGGTCACGGATT...................................................................................................... 28 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TTCCTGTTGACTGGTCACGGATT...................................................................................................... 23 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................TTCCTGTTGACTGGTAACGGTTTTCC................................................................................................... 26 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................AGTCTTGATTTCTGTTGG................................................................................................................... 18 2 10 0.20 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0
...............................................TGATTCCTGTTGACTGGTCACGGCT....................................................................................................... 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................CTTTGGGTTCCGGGCGGAGT.................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................TTCCTGTTGACTGGTCACGGATTT..................................................................................................... 24 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................CTGTTGACTGGTCACGGGTCCC.................................................................................................... 22 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AGGTCGCGGGTTCCCTCAT............................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................TTGAATGGTCAAGGGTTC..................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................TTCCTGTTGACTGGTCACGGTTTTAC................................................................................................... 26 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................CTGGATTCCTGTTGACTGGTCACGG......................................................................................................... 25 1 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................TCAATGCATTCCTGCATTCGAGGAACC........................................................................ 27 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................TGGGTTTCGGCCTGTTTCTG............................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................TTCCTGTTGACTGGTCATGG......................................................................................................... 20 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTCCTGTTGACTGGTCACGGGTCC..................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................CTGGATTCCTGTTGACTGGTCACGT......................................................................................................... 25 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTCCTGTTGACTGGTCAC........................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ATGTAAACGGCCGTCGGGCTGGTCTGAAACCCAAAGCCGGACTCAGAACTAAGGACAACTGACCAGTGCCCAAGGGAGTTACGTAAGGACGTAAGCTCCTTGGGAAATACTGTCAGGGTCTTACGGGCAACACCGAGGCGGACGACTTTGTACCCNNNNNNNNNNNNNNNNNNNN
*********************************************************((((..((((....))))..))))((((.(((.(((((((.((((((((....)))))).)))))))))....)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060676
9xArg_ovaries_total
 SRR1106714
embryo_2-4h
 SRR060658
140_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 M028
head
 GSM1528803
follicle cells		 SRR060684
140x9_0-2h_embryos_total
 V116
male body
....................................CCGGACTCAGACCTAAGGACAACT................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...............................CCAAGCCGGACTCATACCTAAGGACAACT................................................................................................................... 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................ACTCAGACCTAAGGACAACT................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................AAATTAGGACAACTGACCAGGGC.......................................................................................................... 23 3 5 0.20 1 0 0 0 0 1 0 0 0 0
.....................................................................CCAAGGGAGTTACGTAAGGAC..................................................................................... 21 0 20 0.10 2 0 0 0 2 0 0 0 0 0
..............................................................................................................TGTCAGGGTTGTGCGGGCA.............................................. 19 3 15 0.07 1 0 0 0 0 0 1 0 0 0
...................................................................GCCCAAGCGAGCTACGTC.......................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0
......................................................................CAAGGGAGTTACGTAAGGAC..................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0
......................................................................CAAGGGAGTTACGTAAGGACG.................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0
..................................................AAGGACAACTGACCAGTGC.......................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 1 0
.......................................................................................GACGTAAGCTCCTTG......................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 1 0 0
.................................................................GTGCCCAAGCCAGTCACG............................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12151:2710-2884 - dvi_323 TACATTTGCCGGCAGCCCGACCAGACTTTGGGTTTCGGCCTGAGT-C-TTGATTCCTGTTGACTGGTCACGGGTTCCCTCAATGCATTCCTGCATTCGAGGAACCCTTTATGACAGTCCCAGAATGCCCGTTGTGGCTCCGCCTGCTGAAA--------CATGGG------------NNNNNNNNNNNNNNNNNNNN
droMoj3 scaffold_6499:420682-420830 - TACATTTGCCGGCAGC-CGACCAGACTTTGG-GTTCGGCCTGAGTCT-TGGATTCCTGTTGACTGGTCACGGT-TCCCTCAATGCATTCCTGCATTCGAGGAACC-TTTATGACAGTC-CAGAATGCCG-TTGTGGCTCGG-CTGCTGAGA--------CATGGG--------------------------------
droGri2 scaffold_231:896-1044 - CACATTTGCTGTTGAC-CGTCCAGACTTCAG-GCTTCACCTGAGTTT-TGGATTTTTGTTGACGGGCCACGGG-TCTCTGAACGCATTCTTGCATTCAAGACGAC-TTTGTGATAGCC-CGGAATGCCC-TTGTGGCTGGG-CGGGAGAGA--------CATGGG--------------------------------
droWil2 scf2_1100000004896:3373-3472 + TGC-TTCGTCTTCAGC-CGGAAGGACTTTGG-TTTTGGACTTCACGC-TGGATTCTTGCTGACTGGCCATGGA-TCGCTGAATGCATTCCTGTATGAGAGAAGTC--------------------------------------------------------------------------------------------
dp5 Unknown_singleton_3471:11422-11569 + CACGTTTGTCAGCTGT-CGACCGGAGTTTGG-TTTAAACCTTAGTTC-TGGGTTCCTCTTGATTGGTCACGGC-TCTCTCAATGCATTCCTGCATTCGAGGGGCC-TGAGTGACAGTC-CGGAATGCCG-TTGTGGCTCGA-GCGAGGAGACATGG-----------------------------------------
droPer2 scaffold_616:1245-1369 - AGGCTTCGTCTACAGC-GAACGAAGGTTTGG-CTTCACGCTGCGCGC-TGGGTTCCTGCTGACGGGCCACGGA-TCGCTCAATGCATTTCTGCATGGAAGAAGCC-TTAGCGACACGC-CAGCATGTCT-AT-----------------------------------------------------------------
droAna3 scaffold_13278:30593-30749 + CTCGTTTGCTGTCGAT-CGACCGGACTTTGG-TTTTAACCTTAGTGC-CGGGTTCCTGTTGACTGGCCATGGG-TCGCTGAATGCATTCTTGCATAGGCGGAACT-TGGCGGGCAGTC-CGGAATGCCG-GTGTGGCTCTC-GGTAGGAGACCTGGAAACATGGG--------------------------------
droBip1 scf7180000395385:3556-3703 - CTCGTTTGTTGCCAAC-CGACCGGACTTTGG-TTTCAACCTCAGTGC-CGGGTTCCTATTGACTGGCCATGGA-TCGCTGAATGCATGATTGCATAGTCGGCGCC-TGGCAGACAGTC-CGGAATGCCA-GTGTGGCTCGG-ATGGCGAGACCTGG-----------------------------------------
droKik1 scf7180000300773:371-500 - CTCATTTGTCAGTAAT-TGCCAAGACTTTGG-GTTCAACCTTAGTTT-AGGTTTTTTGCTGACTGGTCATGGG-TCTCTGAATGATTTCCTAAGTAGGATTCAGC-GTAGTGACACTC-GGGAATGCCT-TTGTGGC------------------------------------------------------------
droFic1 scf7180000452029:1267-1367 + AGCGTTCGACTACCAC-AGGAAAGACTTCGG-TTTTAACCTACGGGC-CGATTTCTTGCTGACGGGTCACGGA-TCGCTGAACGCATTTCTCTATGAGAGACATC--------------------------------------------------------------------------------------------
droEle1 scf7180000489549:513-637 + AGCGTTTCTTTACAAT-AGGAAAGACTTTGG-TTTAACCCTAAGAGC-CGGATTTTTGATGACAGGACATGGG-TCGCTGAATGTGTTTCTGATGGGGAGAAGTC-TCAGCAACACAC-CAGCATGCTC-AT-----------------------------------------------------------------
droRho1 scf7180000778089:15091-15227 + GAGGCTCGTCTACAGG-AACCCGGAATTTGG-ATTTCCGATGCGCAC-GGGATTCTTGCTTACAGGGCACGGA-TCGTTTAACGCATTTCTGCATAGGAGGGCCC-TCAGCGATACTG-CCGCATGCTC-ATGTGGCGATC-CGC----------------------------------------------------
droBia1 scf7180000301589:146712-146836 + AGAGTTCGTATACAAG-AGGAAGAACTTTGT-CTTTACCTTAAGAGC-CGGATTCTTGTTGACAGGACACGGG-TCGTTCAACGCATTTCTCCATGACAGAACTC-TCAGGATCACAA-CAGCATGCTC-AT-----------------------------------------------------------------
droTak1 scf7180000410477:7221-7310 + GAC-TTTGCATTTCGG-AATCCACACTTTGG-ATTCCCGATGCGCAC-CGGATTTTTAATCACAGGACACGGA-TCGTTGAACGCATTTCCGCAT------------------------------------------------------------------------------------------------------
droEug1 scf7180000409318:4799-4896 + T----TGGTCTACCGG-AATCCGAATTTCGG-TTTCTCGATGCGCGC-AGGATTCTTGATGACAGGGCACGGG-TCGTTCAACGCATTTCTGCATAGCAGAGGCC-C------------------------------------------------------------------------------------------
dm3 chrUextra:7992124-7992264 - CACTTTTGCCTATCGG-GATCCAAGTTTTTG-ATTCTCGATGAGGAC-GTCTTTCCTGCTTAAAAGGCACGAG-CC----------------------------C-TCAGCGATACCA-CTGCTTGCGC-ATGTGGAAATC-CATATGAGGACTGGATGCACATTTTGTGCGCTTGC--------------------
droSec2 scaffold_3414:2371-2480 + CACTCTCGCCTATCGG-GATCCAAGCTTTGG-ATTCTCGATGAGGAC-GTCTTACCTGCTGACAGGTCACGGG-TCGATCAACGCATTTTTGCAAGGGAGAACCC-TCAGCGATA----------------------------------------------------------------------------------
droYak3 v2_chrUn_2706:3026-3120 + CACTCTCGTTTTCG-G-GATCAAAAGTTTGG-TTTTTCGATGAAGGC-GTCTTTCTTGCTTACTGGGCACTGG-TCGTTCAATGCATTTTTGCACGGGAG-------------------------------------------------------------------------------------------------
droEre2 scaffold_4858:108581-108691 + CACCCTCGTCTATCGG-GATCCGAATTTTGG-TTTCTCGATGATGGCGTCTTTTCTTGCTCACTGGGCACGGG-TCGTTCAACGCATTTCTGCATGGGAGAGCCC-TTAGCGATA----------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TACATTTGCCGGCAGCCCGACCAGACTTTGGGTTTCGGCCTGAGT-C-TTGATTCCTGTTGACTGGTCACGGGTTCCCTCAATGCATTCCTGCATTCGAGGAACCCTTTATGACAGTCCCAGAATGCCCGTTGTGGCTCCGCCTGCTGAAA--------CATGGG------------NNNNNNNNNNNNNNNNNNNNSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................TTCCTGTTGACTGGTCACGG.............................................................................................................................20201.30260000000000000000000000000000000000000000000000000000000000000026
....................................................TTCCTGTTGACTGGTCACGGG............................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.................................................TGATTCCTGTTGACTGGTCAC...............................................................................................................................2120.501000000000000000000000000000100000000000000000000000000000000000
................................................TTGATTCCTGTTGACTGGTCACGG.............................................................................................................................2420.501000100000000000000000000000000000000000000000000000000000000000
..............................................................................TCAATGCATTCCTGCATTCGAGGAACC............................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
....................................................TTCCTGTTGACTGGTCAC...............................................................................................................................18200.051000000000000000000000000000000000000000000000000001000000000000
droMoj3
TACATTTGCCGGCAGC-CGACCAGACTTTGG-GTTCGGCCTGAGTCT-TGGATTCCTGTTGACTGGTCACGGT-TCCCTCAATGCATTCCTGCATTCGAGGAACC-TTTATGACAGTC-CAGAATGCCG-TTGTGGCTCGG-CTGCTGAGA--------CATGGG--------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................TTATGACAGTC-CAGAATGCC.....................................................................2030.331100000
droGri2
CACATTTGCTGTTGAC-CGTCCAGACTTCAG-GCTTCACCTGAGTTT-TGGATTTTTGTTGACGGGCCACGGG-TCTCTGAACGCATTCTTGCATTCAAGACGAC-TTTGTGATAGCC-CGGAATGCCC-TTGTGGCTGGG-CGGGAGAGA--------CATGGG--------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TGC-TTCGTCTTCAGC-CGGAAGGACTTTGG-TTTTGGACTTCACGC-TGGATTCTTGCTGACTGGCCATGGA-TCGCTGAATGCATTCCTGTATGAGAGAAGTC--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................TTGGACTTCACGC-TGGATTCTTGC..........................................................................................................................................241413.001825173040
..................................TTGGACTTCACGC-TGGATTCTTG...........................................................................................................................................23146.9397096010
....TTCGTCTTCAGC-CGGAAGGACTTTGG-.....................................................................................................................................................................26112.7330028020
..................................TTGGACTTCACGC-TGGATTCTTGCTG........................................................................................................................................26141.7124022020
...................................TGGACTTCACGC-TGGATTCTTGC..........................................................................................................................................23141.3619019000
..................................TTGGACTTCACGC-TGGATTCTTGCT.........................................................................................................................................25141.2117311030
....TTCGTCTTCAGC-CGGAAGGACTT.........................................................................................................................................................................23121.0012012000
...................................TGGACTTCACGC-TGGATTCTTG...........................................................................................................................................22140.9313013000
....TTCGTCTTCAGC-CGGAAGGACTTTG.......................................................................................................................................................................25110.64707000
.........................................TCACGC-TGGATTCTTGCTGACTG....................................................................................................................................23100.60606000
..................................TTGGACTTCACGC-TGGATTCTTGCTGA.......................................................................................................................................27100.60606000
....................................................TTCTTGCTGACTGGCCATGGA-TCGC.......................................................................................................................2590.56513010
....TTCGTCTTCAGC-CGGAAGGACTTTGG-TT...................................................................................................................................................................28110.55605010
.........................................TCACGC-TGGATTCTTGCTGACTGG...................................................................................................................................24100.50505000
....TTCGTCTTCAGC-CGGAAGGACTTTGG-T....................................................................................................................................................................27110.45505000
...............................................................TGGCCATGGA-TCGCTGAATGCATT.............................................................................................................24120.42503020
..................................TTGGACTTCACGC-TGGATTCTTGCTGAC......................................................................................................................................28100.40404000
.........................................TCACGC-TGGATTCTTGCTGACTGGC..................................................................................................................................25100.40404000
.....TCGTCTTCAGC-CGGAAGGACTTTGG-.....................................................................................................................................................................25110.36404000
..............GC-CGGAAGGACTTTGG-TTTTGGAC.............................................................................................................................................................24140.36523000
....TTCGTCTTCAGC-CGGAAGGACTTT........................................................................................................................................................................24120.33404000
.......................GACTTTGG-TTTTGGACTTCACGC-T....................................................................................................................................................24120.33404000
.....................................................TCTTGCTGACTGGCCATGGA-TCGC.......................................................................................................................2490.33301020
..................................................GATTCTTGCTGACTGGCCATGGA-T..........................................................................................................................24100.30302010
........................ACTTTGG-TTTTGGACTTCACGC-T....................................................................................................................................................23140.29404000
....TTCGTCTTCAGC-CGGAAGGACT..........................................................................................................................................................................22120.25302010
....TTCGTCTTCAGC-CGGAAGGA............................................................................................................................................................................20120.25303000
............................TGG-TTTTGGACTTCACGC-TGGATT...............................................................................................................................................24130.23303000
.........................................TCACGC-TGGATTCTTGCTGACTGGCCAA...............................................................................................................................2890.22202000
....................................................TTCTTGCTGACTGGCCATGGA-TC.........................................................................................................................2390.22202000
...........................................................TGACTGGCCATGGA-TCGCTGAATGCAT..............................................................................................................2790.22201010
...................................TGGACTTCACGC-TGGATTCTTGCTG........................................................................................................................................25140.21301020
.................................TTTGGACTTCACGC-TGGATTCTTG...........................................................................................................................................24140.21303000
....................................................TTCTTGCTGACTGGCCATGG.............................................................................................................................20100.20202000
...................................TGGACTTCACGC-TGGATTCTTGCTGAC......................................................................................................................................27100.20202000
..................................................GATTCTTGCTGACTGGCCATGGA-...........................................................................................................................23100.20202000
.......................GACTTTGG-TTTTGGACTTCACGC-.....................................................................................................................................................23120.17202000
....TTCGTCTTCAGC-CGGAAGG.............................................................................................................................................................................19120.17202000
............................TGG-TTTTGGACTTCACGC-TGGATTCT.............................................................................................................................................26130.15202000
............................TGG-TTTTGGACTTCACGC-TGGAT................................................................................................................................................23140.14201010
..................................TTGGACTTCACGC-TGGATTCTT............................................................................................................................................22140.14202000
..........TTCAGC-CGGAAGGACTTTGG-TT...................................................................................................................................................................22140.14202000
....................................GGACTTCACGC-TGGATTCTTGC..........................................................................................................................................22140.14202000
.............................GG-TTTTGGACTTCACGC-TGG..................................................................................................................................................20140.14202000
...................................TGGACTTCACGC-TGGATTCTTGCT.........................................................................................................................................24140.14202000
..........TTCAGC-CGGAAGGACTTTGG-TTTTGG...............................................................................................................................................................26140.14200020
.....................AGGACTTTGG-TTTTGGACTTCACG.......................................................................................................................................................24140.14202000
..................................TTGGACTTCACGC-TGGATT...............................................................................................................................................19140.14202000
...............................................................TGGCCATGGA-TCGCTGAATGCATTCCTG.........................................................................................................2880.13101000
...............................................................TGGCCATGGA-TCGCTGAATGCATTC............................................................................................................2580.13100010
....................................................TTCTTGCTGACTGGCCATGGA-TCGCT......................................................................................................................2690.11100010
.....................................................................TGGA-TCGCTGAATGCATTCCTG.........................................................................................................2290.11101000
...........................................................TGACTGGCCATGGA-TCGCTGAATGC................................................................................................................2590.11110000
.....................................................TCTTGCTGACTGGCCATGGA-TCGCTGA....................................................................................................................2790.11101000
....................................................TTCTTGCTGACTGGCCATGGA-TCGCTG.....................................................................................................................2790.11101000
.........................................TCACGC-TGGATTCTTGCTGACTGGCCA................................................................................................................................2790.11101000
.........................................................GCTGACTGGCCATGGA-TCGCTG.....................................................................................................................22100.10101000
........................................TTCACGC-TGGATTCTTGCTGACTGG...................................................................................................................................25100.10101000
...................................TGGACTTCACGC-TGGATTCTTGCTGA.......................................................................................................................................26100.10101000
............................................................................GCTGAATGCATTCCTGTATGAGAG.................................................................................................24100.10101000
..........................................CACGC-TGGATTCTTGCTGACTGGC..................................................................................................................................24100.10110000
.....................................................TCTTGCTGACTGGCCATGGA-T..........................................................................................................................21100.10100010
..................................................GATTCTTGCTGACTGGCCATG..............................................................................................................................21100.10101000
...................................TGGACTTCACGC-TGGATTCTTGCTGACT.....................................................................................................................................28100.10101000
............................................................................GCTGAATGCATTCCTGTATGAGA..................................................................................................23100.10101000
..C-TTCGTCTTCAGC-CGGAAGGACTTTGG-.....................................................................................................................................................................27110.09101000
...............................................................TGGCCATGGA-TCGCTGAATGCA...............................................................................................................22120.08110000
......................GGACTTTGG-TTTTGGACTTCACGC-TG...................................................................................................................................................26120.08101000
....TTCGTCTTCAGC-CGGAAGGAC...........................................................................................................................................................................21120.08101000
.....TCGTCTTCAGC-CGGAAGGA............................................................................................................................................................................19120.08101000
.GC-TTCGTCTTCAGC-CGGAAGGAC...........................................................................................................................................................................23120.08101000
......CGTCTTCAGC-CGGAAGGACTT.........................................................................................................................................................................21120.08101000
......................GGACTTTGG-TTTTGGACTTCACGC-.....................................................................................................................................................24120.08100010
............................TGG-TTTTGGACTTCACGC-TGGATTC..............................................................................................................................................25130.08101000
..............................G-TTTTGGACTTCACGC-TGGATT...............................................................................................................................................22130.08100010
................................TTTTGGACTTCACGC-TGGATTCTTG...........................................................................................................................................25130.08101000
............................TGG-TTTTGGACTTCACGC-TGGATTCTTG...........................................................................................................................................28130.08101000
..........TTCAGC-CGGAAGGACTTTGG-TTTTG................................................................................................................................................................25140.07100010
..............GC-CGGAAGGACTTTGG-TTTTGGACT............................................................................................................................................................25140.07101000
....................AAGGACTTTGG-TTTTGGACTTC..........................................................................................................................................................22140.07101000
..................................TTGGACTTCACGC-TGGATTCT.............................................................................................................................................21140.07101000
...........TCAGC-CGGAAGGACTTTGG-TTTTGGA..............................................................................................................................................................26140.07100010
............CAGC-CGGAAGGACTTTGG-TT...................................................................................................................................................................20140.07101000
...........TCAGC-CGGAAGGACTTTGG-TTTTG................................................................................................................................................................24140.07101000
..............GC-CGGAAGGACTTTGG-TTTTGGACTT...........................................................................................................................................................26140.07101000
..............GC-CGGAAGGACTTTGG-TTTTGGACTTC..........................................................................................................................................................27140.07101000
...........TCAGC-CGGAAGGACTTTGG-TTTTGG...............................................................................................................................................................25140.07101000
..........TTCAGC-CGGAAGGACTTTGG-T....................................................................................................................................................................21140.07100010
.............................GG-TTTTGGACTTCACGC-TGGAT................................................................................................................................................22140.07101000
......................GGACTTTGG-TTTTGGACTTC..........................................................................................................................................................20140.07101000
.......................GACTTTGG-TTTTGGACTTCACG.......................................................................................................................................................22140.07101000
...........TCAGC-CGGAAGGACTTTGG-TTTTGGACT............................................................................................................................................................28140.07101000
.........................................TCACGC-TGGATTCTTGCTG........................................................................................................................................19140.07101000
.................................TTTGGACTTCACGC-TGGATTC..............................................................................................................................................21140.07100010
.................................TTTGGACTTCACGC-TGGATTCTTGC..........................................................................................................................................25140.07100010
..................................TTGGACTTCACGC-TGGATA...............................................................................................................................................19140.07101000
..............GC-CGGAAGGACTTTGG-TTTTGGA..............................................................................................................................................................23140.07101000
...........TCAGC-CGGAAGGACTTTGG-TT...................................................................................................................................................................21140.07100100
..................................TTGGACTTCACGC-TGGAA................................................................................................................................................18150.07100010
dp5
CACGTTTGTCAGCTGT-CGACCGGAGTTTGG-TTTAAACCTTAGTTC-TGGGTTCCTCTTGATTGGTCACGGC-TCTCTCAATGCATTCCTGCATTCGAGGGGCC-TGAGTGACAGTC-CGGAATGCCG-TTGTGGCTCGA-GCGAGGAGACATGG-----------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........TCAGCTGT-CGACCGGAGTTTGG-.....................................................................................................................................................................2242.75110800100020
...........................................................TGATTGGTCACGGC-TCTCT......................................................................................................................1912.0020200000000
....................................................TTCCTCTTGATTGGTCACGGC-TC.........................................................................................................................2312.0020200000000
........TCAGCTGT-CGACCGGAGTTTGG-TT...................................................................................................................................................................2441.7570700000000
.....TTGTCAGCTGT-CGACCGGAGTTTG.......................................................................................................................................................................2441.2550400000100
.......GTCAGCTGT-CGACCGGAGTTTGG-.....................................................................................................................................................................2341.2550500000000
.....TTGTCAGCTGT-CGACCGGAGTTTGG-.....................................................................................................................................................................2541.2550100000040
.......................................................................................TCCTGCATTCGAGGGGCC-TGAGTGA....................................................................................2511.0010100000000
........TCAGCTGT-CGACCGGAGTTTGG-T....................................................................................................................................................................2341.0040200001010
....................................................TTCCTCTTGATTGGTCACGGC-TCT........................................................................................................................2411.0010100000000
................................................TGGGTTCCTCTTGATTGGTCACGG.............................................................................................................................2411.0010000000010
..............................................................................................TTCGAGGGGCC-TGAGTGACAG.................................................................................2111.0010100000000
..............................................................................................................TGACAGTC-CGGAATGCCG-TTGTGG.............................................................2411.0010000001000
.................................................................................................................CAGTC-CGGAATGCCG-TTGTGG.............................................................2131.0030200000010
..............................................................................................................TGACAGTC-CGGAATGCCG-TTGTGGCTCG.........................................................2811.0010100000000
..................................................................................TGCATTCCTGCATTCGAGGGG..............................................................................................2121.0020100010000
.........CAGCTGT-CGACCGGAGTTTGG-.....................................................................................................................................................................2140.7530300000000
.ACGTTTGTCAGCTGT-CGACCGG.............................................................................................................................................................................2240.7530000000030
........TCAGCTGT-CGACCGGAGTTTGG-TTTA.................................................................................................................................................................2640.7530300000000
...............................................................TGGTCACGGC-TCTCTCAATGCAT..............................................................................................................2330.6720200000000
...............................................................TGGTCACGGC-TCTCTCAATGCA...............................................................................................................2230.6720200000000
...................................................................................GCATTCCTGCATTCGAGGGG..............................................................................................2020.5010100000000
.....................................................................................ATTCCTGCATTCGAGGGGCC-TGAG.......................................................................................2420.5010100000000
.......GTCAGCTGT-CGACCGGAGTTTGG-T....................................................................................................................................................................2440.5020200000000
.........CAGCTGT-CGACCGGAGTTTGG-TT...................................................................................................................................................................2340.5020200000000
.................................................................................................................CAGTC-CGGAATGCCG-TTGTGGCTCGA-.......................................................2620.5010000001000
.................................................................................................................CAGTC-CGGAATGCCG-TTGTGGCT...........................................................2320.5010100000000
.................................................................................................................CAGTC-CGGAATGCCG-TTGTGGCTC..........................................................2420.5010100000000
...GTTTGTCAGCTGT-CGACCGGA............................................................................................................................................................................2140.5020000000200
........TCAGCTGT-CGACCGGAGTTTG.......................................................................................................................................................................2140.5020100001000
................................................................................................................ACAGTC-CGGAATGCCG-TTGTGGC............................................................2320.5010100000000
................................................................................AATGCATTCCTGCATTCGAGGGGCC-...........................................................................................2520.5011000000000
.......GTCAGCTGT-CGACCGGAGTTTGG-TT...................................................................................................................................................................2540.5020200000000
...................................................................CACGGC-TCTCTCAATGCATTCC...........................................................................................................2230.3310100000000
........................................TTAGTTC-TGGGTTCCTCTTGA.......................................................................................................................................2130.3310000000100
..................................TAAACCTTAGTTC-TGGGTTCCTCTTGA.......................................................................................................................................2730.3310000000010
...............................................................TGGTCACGGC-TCTCTCAATGCATTCC...........................................................................................................2630.3310100000000
.........................GTTTGG-TTTAAACCTTAGTTC-TGG..................................................................................................................................................2430.3310000000100
......TGTCAGCTGT-CGACCGGAGT..........................................................................................................................................................................2040.2510100000000
CACGTTTGTCAGCTGT-CGACC...............................................................................................................................................................................2140.2510100000000
.....TTGTCAGCTGT-CGACCGGAGTT.........................................................................................................................................................................2240.2510000000010
.........CAGCTGT-CGACCGGAGTTTGG-T....................................................................................................................................................................2240.2510100000000
.ACGTTTGTCAGCTGT-CGACCG..............................................................................................................................................................................2140.2510100000000
..CGTTTGTCAGCTGT-CGACCGGAG...........................................................................................................................................................................2340.2510100000000
......TGTCAGCTGT-CGACCGGAGTTTGG-.....................................................................................................................................................................2440.2510000000010
........TCAGCTGT-CGACCGGAGTT.........................................................................................................................................................................1940.2510100000000
.....TTGTCAGCTGT-CGACCGGAGTTTAA-.....................................................................................................................................................................2540.2510100000000
.....TTGTCAGCTGT-CGACCGGAGTTTGG-TT...................................................................................................................................................................2740.2510100000000
..CGTTTGTCAGCTGT-CGACCGGAGTT.........................................................................................................................................................................2540.2510100000000
.......GTCAGCTGT-CGACCGGAGTTTG.......................................................................................................................................................................2240.2510100000000
.....TTGTCAGCTGT-CGACCGGAGT..........................................................................................................................................................................2140.2510000000100
CACGTTTGTCAGCTGT-CGA.................................................................................................................................................................................1940.2510100000000
.......GTCAGCTGT-CGACCGGAGTTTGG-TTTAA................................................................................................................................................................2840.2510100000000
droPer2
AGGCTTCGTCTACAGC-GAACGAAGGTTTGG-CTTCACGCTGCGCGC-TGGGTTCCTGCTGACGGGCCACGGA-TCGCTCAATGCATTTCTGCATGGAAGAAGCC-TTAGCGACACGC-CAGCATGTCT-AT-----------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................CACGGA-TCGCTCAATGCATTTCTGCAT......................................................................................................27200.102200000
................................................TGGGTTCCTGCTGACGGGCCACGGA-...........................................................................................................................25200.102020000
............................................................................GCTCAATGCATTTCTGCATGGAAG.................................................................................................24200.051000001
................................................TGGGTTCCTGCTGACGGGC..................................................................................................................................19200.051010000
............................TGG-CTTCACGCTGCGCGC-TGG..................................................................................................................................................21200.051001000
...................ACGAAGGTTTGG-CTTCACGCTGCG.........................................................................................................................................................24200.051000001
...................ACGAAGGTTTGG-CTTCACGCTGCGCGC-.....................................................................................................................................................27200.051010000
.............................................................................CTCAATGCATTTCTGCATGGAAGAAG..............................................................................................26200.051010000
...................ACGAAGGTTTGG-CTTCACGCTGT..........................................................................................................................................................23200.051010000
droAna3
CTCGTTTGCTGTCGAT-CGACCGGACTTTGG-TTTTAACCTTAGTGC-CGGGTTCCTGTTGACTGGCCATGGG-TCGCTGAATGCATTCTTGCATAGGCGGAACT-TGGCGGGCAGTC-CGGAATGCCG-GTGTGGCTCTC-GGTAGGAGACCTGGAAACATGGG--------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......GCTGTCGAT-CGACCGGACTTTGG-.....................................................................................................................................................................23132.62343310000
........................................................................G-TCGCTGAATGCATTCTTGCATAGG...................................................................................................25200.80160610000
........................................................................................................T-TGGCGGGCAGTC-CGGAATGCCG-G..................................................................24200.65131300000
.......GCTGTCGAT-CGACCGGACTTTGG-TTT..................................................................................................................................................................26120.587700000
........................................................................G-TCGCTGAATGCATTCTTGCATAG....................................................................................................24200.459720000
.......GCTGTCGAT-CGACCGGACTTTG.......................................................................................................................................................................22130.385500000
......TGCTGTCGAT-CGACCGGACTTTGG-.....................................................................................................................................................................24130.385410000
...................................TAACCTTAGTGC-CGGGTTCCTGTTGAC......................................................................................................................................27110.364400000
........CTGTCGAT-CGACCGGACTTTGG-.....................................................................................................................................................................22130.314400000
....................................................................................................GAACT-TGGCGGGCAGTC-CGGAATGC......................................................................25200.204220000
........................................................................G-TCGCTGAATGCATTCTTGCATA.....................................................................................................23200.204400000
......TGCTGTCGAT-CGACCGGACTTTG.......................................................................................................................................................................23130.152200000
.................................................................................................................CAGTC-CGGAATGCCG-GTGTGGC............................................................22200.153210000
..........................................................................TCGCTGAATGCATTCTTGCATAGG...................................................................................................24200.153210000
........................................................................................................T-TGGCGGGCAGTC-CGGAATGCCG-GTGT...............................................................27200.153300000
.....................................................................................................................C-CGGAATGCCG-GTGTGGCTCTC-G......................................................23200.153300000
....................................................................................................GAACT-TGGCGGGCAGTC-CGGAATG.......................................................................24200.153300000
.........................................TAGTGC-CGGGTTCCTGTTGACTG....................................................................................................................................23200.102200000
....................................AACCTTAGTGC-CGGGTTCCTGTTGAC......................................................................................................................................26200.102200000
.........................................................................................TTGCATAGGCGGAACT-TGGCG......................................................................................21200.102200000
........................................................................................................T-TGGCGGGCAGTC-CGGAATGCCG-GTG................................................................26200.102000020
...................................................................................................................GTC-CGGAATGCCG-GTGTGGCTCTC-.......................................................24200.102200000
.........................................TAGTGC-CGGGTTCCTGTTGACTGG...................................................................................................................................24200.102101000
........................................TTAGTGC-CGGGTTCCTGTTGACTG....................................................................................................................................24200.102200000
...................................TAACCTTAGTGC-CGGGTTCCTGTTGACT.....................................................................................................................................28110.091100000
......TGCTGTCGAT-CGACCGGACTTTGG-T....................................................................................................................................................................25120.081100000
........CTGTCGAT-CGACCGGACTTTGG-T....................................................................................................................................................................23120.081100000
.................................TTTAACCTTAGTGC-CGGGTTCCTGTTG........................................................................................................................................27130.081100000
.....................................................TCCTGTTGACTGGCCATGGG-TCGCT......................................................................................................................25150.071100000
.....................................................TCCTGTTGACTGGCCATGGG-...........................................................................................................................20150.071100000
..............................G-TTTTAACCTTAGTGC-CGGGTTC..............................................................................................................................................23200.051100000
....................................................................................................GAACT-TGGCGGGCAGTC-CGGAA.........................................................................22200.051100000
.....................................................................TGGG-TCGCTGAATGCATTCTTGCATAGG...................................................................................................28200.051100000
............................................................................................CATAGGCGGAACT-TGGCGGGC...................................................................................21200.051010000
...........................................................................................................GGCGGGCAGTC-CGGAATGCCG-G..................................................................22200.051100000
..........................................AGTGC-CGGGTTCCTGTTGACTGG...................................................................................................................................23200.051100000
....................................................................................................GAACT-TGGCGGGCAGTC-CGGA..........................................................................21200.051100000
...............................................................TGGCCATGGG-TCGCTGAATGCATTCT...........................................................................................................26200.051100000
................................................................................................GGCGGAACT-TGGCGGGCAGTC-CG............................................................................23200.051100000
...................................TAACCTTAGTGC-CGGGTTC..............................................................................................................................................19200.051010000
......................................................................................TTCTTGCATAGGCGGAACT-TG.........................................................................................21200.051100000
....................................................................................................GAACT-TGGCGGGCAGTC-CGGAATGCC.....................................................................26200.051010000
..........................................................................................................TGGCGGGCAGTC-CGGAATGCCG-T..................................................................23200.051100000
..................................................................................TGCATTCTTGCATAGGCGGAACT-TGGCG......................................................................................28200.051100000
........................................TTAGTGC-CGGGTTCCTGTTGACTGGCCA................................................................................................................................28200.051100000
....................................AACCTTAGTGC-CGGGTTCCTGTTGA.......................................................................................................................................25200.051010000
...............................................................................................................GGCAGTC-CGGAATGCCG-GTGTGGC............................................................24200.051001000
...............................................................TGGCCATGGG-TCGCTGAATGCATTC............................................................................................................25200.051100000
........................................................................G-TCGCTGAATGCATTCTTGCATAGGC..................................................................................................26200.051010000
......................................................................................TTCTTGCATAGGCGGAACT-TGGC.......................................................................................23200.051100000
..................................................................................................CGGAACT-TGGCGGGCAGTC-CGGA..........................................................................23200.051100000
.......................................................................................................CT-TGGCGGGCAGTC-CGGAATGCC.....................................................................23200.051010000
....................................................................................CATTCTTGCATAGGCGGAACT-TGGCG......................................................................................26200.051100000
........................................................................G-TCGCTGAATGCATTCTTGCAT......................................................................................................22200.051100000
........................................................................G-TCGCTGAATGCATTCTTGCATAGGCG.................................................................................................27200.051100000
..........................................................TTGACTGGCCATGGG-TCGCTGAATGC................................................................................................................26200.051100000
....................................................................................................................TC-CGGAATGCCG-GTGTGGCTCT.........................................................22200.051100000
...............................................................................GAATGCATTCTTGCATAGGCGGAA..............................................................................................24200.051010000
...............T-CGACCGGACTTTGG-TTTTAACCTTA..........................................................................................................................................................26200.051100000
.........................................TAGTGC-CGGGTTCCTGTTGACTGGCCATG..............................................................................................................................29200.051100000
..........................................................................................................TGGCGGGCAGTC-CGGAATGCCG-G..................................................................23200.051100000
...........................................................................................GCATAGGCGGAACT-TGGCGGGC...................................................................................22200.051000001
.....................................ACCTTAGTGC-CGGGTTCCTGTTGAC......................................................................................................................................25200.051010000
..........................................................................................................TGGCGGGCAGTC-CGGAATGC......................................................................20200.051001000
..........................................................................................TGCATAGGCGGAACT-TGGCGGGT...................................................................................23200.051100000
......................................CCTTAGTGC-CGGGTTCCTGTTGACT.....................................................................................................................................25200.051010000
.....................................................................................................AACT-TGGCGGGCAGTC-CGGAATG.......................................................................23200.051100000
........................................................................................................T-TGGCGGGCAGTC-CGGAAC........................................................................19200.051010000
.................................................................................................GCGGAACT-TGGCGGGCAGTC-..............................................................................20200.051100000
............................................................................................CATAGGCGGAACT-TGGCGGGCA..................................................................................22200.051100000
.................................................................................................................CAGTC-CGGAATGCCG-GTGTGGCT...........................................................23200.051100000
....................................................................................................................TC-CGGAATGCCG-GTGTGGCTCTC-.......................................................23200.051010000
...................................................................................................................GTC-CGGAATGCCG-GTGTGGCTCT.........................................................23200.051100000
....................................AACCTTAGTGC-CGGGTTCCTGTTGACT.....................................................................................................................................27200.051100000
.................................................................................................GCGGAACT-TGGCGGGCAGTC-CGGA..........................................................................24200.051100000
........................................................................................................T-TGGCGGGCAGTC-CGGAATGT......................................................................21200.051100000
...........................................................................CGCTGAATGCATTCTTGCATAG....................................................................................................22200.051010000
........................................TTAGTGC-CGGGTTCCTGTTGACTGG...................................................................................................................................25200.051100000
........................................................................................................T-TGGCGGGCAGTC-CGGAATG.......................................................................20200.051100000
droBip1
CTCGTTTGTTGCCAAC-CGACCGGACTTTGG-TTTCAACCTCAGTGC-CGGGTTCCTATTGACTGGCCATGGA-TCGCTGAATGCATGATTGCATAGTCGGCGCC-TGGCAGACAGTC-CGGAATGCCA-GTGTGGCTCGG-ATGGCGAGACCTGG-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTCATTTGTCAGTAAT-TGCCAAGACTTTGG-GTTCAACCTTAGTTT-AGGTTTTTTGCTGACTGGTCATGGG-TCTCTGAATGATTTCCTAAGTAGGATTCAGC-GTAGTGACACTC-GGGAATGCCT-TTGTGGC------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGCGTTCGACTACCAC-AGGAAAGACTTCGG-TTTTAACCTACGGGC-CGATTTCTTGCTGACGGGTCACGGA-TCGCTGAACGCATTTCTCTATGAGAGACATC--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGCGTTTCTTTACAAT-AGGAAAGACTTTGG-TTTAACCCTAAGAGC-CGGATTTTTGATGACAGGACATGGG-TCGCTGAATGTGTTTCTGATGGGGAGAAGTC-TCAGCAACACAC-CAGCATGCTC-AT-----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GAGGCTCGTCTACAGG-AACCCGGAATTTGG-ATTTCCGATGCGCAC-GGGATTCTTGCTTACAGGGCACGGA-TCGTTTAACGCATTTCTGCATAGGAGGGCCC-TCAGCGATACTG-CCGCATGCTC-ATGTGGCGATC-CGC----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGAGTTCGTATACAAG-AGGAAGAACTTTGT-CTTTACCTTAAGAGC-CGGATTCTTGTTGACAGGACACGGG-TCGTTCAACGCATTTCTCCATGACAGAACTC-TCAGGATCACAA-CAGCATGCTC-AT-----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAC-TTTGCATTTCGG-AATCCACACTTTGG-ATTCCCGATGCGCAC-CGGATTTTTAATCACAGGACACGGA-TCGTTGAACGCATTTCCGCAT------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
T----TGGTCTACCGG-AATCCGAATTTCGG-TTTCTCGATGCGCGC-AGGATTCTTGATGACAGGGCACGGG-TCGTTCAACGCATTTCTGCATAGCAGAGGCC-C------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CACTTTTGCCTATCGG-GATCCAAGTTTTTG-ATTCTCGATGAGGAC-GTCTTTCCTGCTTAAAAGGCACGAG-CC----------------------------C-TCAGCGATACCA-CTGCTTGCGC-ATGTGGAAATC-CATATGAGGACTGGATGCACATTTTGTGCGCTTGC--------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................ATATGAGGACTGGATGCACATTTTG.............................252030.1060200000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327000000000000000000000000000000000000000000000000000000000000000000000027300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................CCAAGTTTTTG-ATTCTCGATGAGGAC-G....................................................................................................................................................27822.0017600000000000000000000000100000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010002300008000000000000000000000000010000000001000000000000010000030001000260652671021000000000000000000000000000000000000000000000000000000000001000003411000000004000000000000000000000000
...................................................................................................................................................GAGGACTGGATGCACATTTTGTGC..........................242021.454290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002400000000000000000004050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAGGACTGGATGCACATTTTGTGCGCT.......................272020.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221000000000000000000000000000000000000000000000000000000000000000000000000000000000000017900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCAAGTTTTTG-ATTCTCGATGAGGAC-.....................................................................................................................................................26813.501080000000000000000000000000000000000000100100000102000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000003000000000400000000000000000000000000000000000000000000000000000000000000011338982720000000000000000000000000000000000000000000000000000000000000000041000000000100000000000000000000000000
.................................................................................................................................................ATGAGGACTGGATGCACATTTTG.............................232011.852370000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000221000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTTGCCTATCGG-GATCCAAGTTT.........................................................................................................................................................................23410.25410000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231010100000000000000000000000000000000000200200001040000000000056000100200000000000000000000000000000000000000000000000000000000000000000001000000000000000142000000000000000000000000
....................CCAAGTTTTTG-ATTCTCGATGAGG........................................................................................................................................................24810.2582000000000000000000000010000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000100000000000000000000000000000000000000200000000000000000000021009117244610000000000000000000000000000000000000000000000000000000000001000003200000000000000000000000000000000000
...................................................................................................................................................GAGGACTGGATGCACATTTTGT............................22209.701940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005700000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013100000000
....................CCAAGTTTTTG-ATTCTCGATGAGGA.......................................................................................................................................................2589.6377000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000200000000000000000000020001014465200000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000
...................................................................................................................................................GAGGACTGGATGCACATTTTGTGCGC........................26208.501700000000000000000000000000000010000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000001800014400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTTTGCCTATCGG-GATCCAAGTTT.........................................................................................................................................................................2448.50340000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010100000000000000000000000000000000000000010100000040000001000100000000410000010000000000000000000000000000000000000000000000000000000000002000002221000000331000000000000000000000000
....................CCAAGTTTTTG-ATTCTCGATGAG.........................................................................................................................................................2388.50680000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100100000180000000000000000000000000000000000000000200000000000000000011003213103021000000000000000000000000000000000000000000000000000000000000000002500000000000000000000000000000000000
.....................CAAGTTTTTG-ATTCTCGATGAGGAC-G....................................................................................................................................................26108.00800000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000200000000000000000000000000000000000000000000000000000000001000000000001023119692111000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................ATATGAGGACTGGATGCACATTT...............................23206.40128000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000012400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TATGAGGACTGGATGCACATTTTGTGC..........................27206.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000117000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................ATGAGGACTGGATGCACATTTTGT............................24205.40108000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001040000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGCCTATCGG-GATCCAAGTTTTTG-AT...................................................................................................................................................................2685.38430000000100000000000000000000000000001000100000000010100000000000000000000000000000002020000000000000000000000000000500000000000000100000000001000021021100000000000000000000000000000000000001300000000010002020000000102220001200000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......TGCCTATCGG-GATCCAAGTTTTTG-A....................................................................................................................................................................2585.38430000000000000000000000000000000000000000000000000010000000000000000000000000000000000020000000000000000000000000000000000000000000000011000000000010000000000000000000000000000000000000000000000000000400010000010000000020202420000000000000000000000000000000000000000000000000000000000000000001044000000541000000000000000000000000
....TTTGCCTATCGG-GATCCAAGTTTTTG-A....................................................................................................................................................................2745.00200000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000203030000000000000000000000000000000000000000000000000000000000000000001113000000300000000000000000000000000
....TTTGCCTATCGG-GATCCAAGTTTT........................................................................................................................................................................2444.75190000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000100000000000000000000000000000000000020000000040000000000000000300200000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000
................................................................................................................................................TATGAGGACTGGATGCACATTTTG.............................24204.45890000000000000000000000020000000000001600002600000000000000000000000000000000000000000000000000000100000000000000007002000000000000000000000000000000000320000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTTGCCTATCGG-GATCCAAGTTTTT.......................................................................................................................................................................2543.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000020000000000000000000000000000000000010100000000000000000000000000100001110000000000000000000000000000000000000000000000000000000000000000000000000000231000000000000000000000000
...................TCCAAGTTTTTG-ATTCTCGATGAGGAC-G....................................................................................................................................................2883.63290000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000010100000000000000000000000000000000000000001000000000000020000000010245100000000000000000000000000000000000000000000000000000000000000000000002000000300000000000000000000000002
.....................CAAGTTTTTG-ATTCTCGATGAGGA.......................................................................................................................................................24103.60360000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000200071853020000000000000000000000000000000000000000000000000000000000002000000100000000001000000000000000200000000
............................TTG-ATTCTCGATGAGGAC-GTCTTTCCT............................................................................................................................................27103.40340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110200000000000000000000000000000000000000002100000000000000000000000300110000340000000000000000000000000000000000000000000000000000000000000000001102000000712000000000000000001000000
..................................................................................................................................................TGAGGACTGGATGCACATTTTGTGCGC........................27202.955900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
.........................TTTTTG-ATTCTCGATGAGGAC-GTC..................................................................................................................................................24102.80280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110050100300000011221000000000000000000000000000000000000100000000000000000000000000001000310101000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000
...................................................................................................................................TGTGGAAATC-CATATGAGGACTGGA........................................2542.75110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000200000000000000000111100000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000
.ACTTTTGCCTATCGG-GATCCAAGT...........................................................................................................................................................................2442.75110000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000200003000000000000000000000000000000000000000000000003000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................C-TCAGCGATACCA-CTGCTTGCGC-ATG................................................................26202.7054000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003900000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCGG-GATCCAAGTTTTTG-ATTCTCGA.............................................................................................................................................................2682.632100000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017
............................TTG-ATTCTCGATGAGGAC-GTCTTTCC.............................................................................................................................................26102.60260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100100000000000000000000000000000000000000000000000000001000000010000000000000300020201531000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000
....TTTGCCTATCGG-GATCCAAG............................................................................................................................................................................2042.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200300000000000000000000000000000000000000000000000000000000000000000000000001101000000010000000000000000000000000
....................CCAAGTTTTTG-ATTCTCGATGAGGAC-GT...................................................................................................................................................2882.50200000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040304400000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000
.....................CAAGTTTTTG-ATTCTCGATGAGGAC-GTC..................................................................................................................................................28102.302300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000131032210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TGAGGAC-GTCTTTCCTGCTTAAAAGGC.................................................................................................................................2732.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....TTTGCCTATCGG-GATCCAAGT...........................................................................................................................................................................2142.0080000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000020000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..CTTTTGCCTATCGG-GATCCAAGTTT.........................................................................................................................................................................2542.0080000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000100000000000000000000000000000000000200000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....TTTGCCTATCGG-GATCCAAGTT..........................................................................................................................................................................2242.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100001001000000000000000000001000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000
......................AAGTTTTTG-ATTCTCGATGAGGAC-G....................................................................................................................................................25101.80180000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000001031620100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.ACTTTTGCCTATCGG-GATCCAAGTTT.........................................................................................................................................................................2641.7570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000
...................TCCAAGTTTTTG-ATTCTCGATGAGGAC-.....................................................................................................................................................2781.75140000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000005000000000000000000000000000000000000000000000010000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000
...TTTTGCCTATCGG-GATCCAAG............................................................................................................................................................................2141.7570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000300000000000000000000000000000000000000000000000000000000000010000000000000001100000000000000000000000000000000000
..................................................................................................................................ATGTGGAAATC-CATATGAGGACTGGA........................................2641.7570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTAAAAGGCACGAG-CC----------------------------C-TCAGCGA....................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTTTGCCTATCGG-GATCCAAGTTTT........................................................................................................................................................................2541.5060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000100101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TAAAAGGCACGAG-CC----------------------------C-TCAGCGAT...................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AATC-CATATGAGGACTGGATGCACATT................................2741.5060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TACCA-CTGCTTGCGC-ATGTGGAAATC-C......................................................2741.5060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTTCCTGCTTAAAAGGCACGAG-CC----------------------------C-...........................................................................................2521.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................TCCAAGTTTTTG-ATTCTCGATGAG.........................................................................................................................................................2481.50120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000010000050000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000001000000
...............................................................................................................................................ATATGAGGACTGGATGCACATT................................22201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TG-ATTCTCGATGAGGAC-GTCTTTCCT............................................................................................................................................26101.40140000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000010010000000000000000000000000000000000000000100000000000002000100000000001101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................TGAGGACTGGATGCACATTTTGTGCGCT.......................28201.402800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000060000000000000000000000000000000000000000000000000000018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAAGTTTTTG-ATTCTCGATGAGGAC-.....................................................................................................................................................25101.40140000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010041231100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CACGAG-CC----------------------------C-TCAGCGATACCA-CTGCT.........................................................................2681.38110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................CCAAGTTTTTG-ATTCTCGATGA..........................................................................................................................................................2281.38110000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................ATGTGGAAATC-CATATGAGGA.............................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TGAGGACTGGATGCACATTTTGTGCGT........................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TGCTTGCGC-ATGTGGAAATC-C......................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................TCTCGATGAGGAC-GTCTTTCCT............................................................................................................................................22200.2040000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSec2
CACTCTCGCCTATCGG-GATCCAAGCTTTGG-ATTCTCGATGAGGAC-GTCTTACCTGCTGACAGGTCACGGG-TCGATCAACGCATTTTTGCAAGGGAGAACCC-TCAGCGATA----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................TCCAAGCTTTGG-ATTCTCGATG...........................................................................................................................................................22202.855757000
...................TCCAAGCTTTGG-ATTCTCGATGAG.........................................................................................................................................................24202.004000400
...................TCCAAGCTTTGG-ATTCTCGATGAGG........................................................................................................................................................25200.951900190
....................CCAAGCTTTGG-ATTCTCGATGAGGAC-.....................................................................................................................................................26200.501010000
...................TCCAAGCTTTGG-ATTCTCGAT............................................................................................................................................................21200.4599000
....................CCAAGCTTTGG-ATTCTCGATGA..........................................................................................................................................................22200.3577000
.................................TTCTCGATGAGGAC-GTCTTACCT............................................................................................................................................23200.1530030
.................................TTCTCGATGAGGAC-GTCTTACCTA...........................................................................................................................................24200.1020020
....................CCAAGCTTTGG-ATTCTCGATGAGG........................................................................................................................................................24200.1020020
............................................GAC-GTCTTACCTGCTGACAGGTCACGG.............................................................................................................................27200.1022000
................................................GTCTTACCTGCTGACAGGTCACGGG-...........................................................................................................................25200.1022000
.......................AGCTTTGG-ATTCTCGATGAGG........................................................................................................................................................21200.1022000
.................................TTCTCGATGAGGAC-GTCTTACCTGC..........................................................................................................................................25200.1020020
........................................TGAGGAC-GTCTTACCTGCTGACAGGT..................................................................................................................................26200.1022000
................................ATTCTCGATGAGGAC-GTCTTACCTGCTG........................................................................................................................................28200.0511000
..................................................CTTACCTGCTGACAGGTCACGGG-TC.........................................................................................................................25200.0511000
...................................................TTACCTGCTGACAGGTCACGGG-TCA........................................................................................................................25200.0511000
...................................................TTACCTGCTGACAGGTCACGGG-...........................................................................................................................22200.0510010
.................................................TCTTACCTGCTGACAGGTCACGGG-A..........................................................................................................................25200.0510010
.............................................AC-GTCTTACCTGCTGACAGGTCACG..............................................................................................................................25200.0511000
.................................TTCTCGATGAGGAC-GTCTTACCA............................................................................................................................................23200.0510010
..............................................C-GTCTTACCTGCTGACAGGTCA................................................................................................................................22200.0511000
..................................TCTCGATGAGGAC-GTCTTACCTGCTG........................................................................................................................................26200.0511000
....................CCAAGCTTTGG-ATTCTCGATG...........................................................................................................................................................21200.0510010
..............................................................................TCAACGCATTTTTGCAAGGGAT.................................................................................................22200.0511000
......................AAGCTTTGG-ATTCTCGATGAGGAC-G....................................................................................................................................................25200.0511000
.................................TTCTCGATGAGGAC-GTCTTACCTGCT.........................................................................................................................................26200.0510001
..............................................C-GTCTTACCTGCTGACAGGTCACGGG-...........................................................................................................................26200.0511000
.................................TTCTCGATGAGGAC-GTCTTACCTGCTG........................................................................................................................................27200.0510010
................................ATTCTCGATGAGGAC-GTCTTACCTG...........................................................................................................................................25200.0511000
..................................................CTTACCTGCTGACAGGTCACG..............................................................................................................................21200.0511000
......................AAGCTTTGG-ATTCTCGATGAGGA.......................................................................................................................................................23200.0511000
................................................GTCTTACCTGCTGACAGGTCACGGG-TC.........................................................................................................................27200.0511000
...TCTCGCCTATCGG-GATCCAAG............................................................................................................................................................................21200.0511000
......................AAGCTTTGG-ATTCTCGATG...........................................................................................................................................................19200.0511000
...............................................................................CAACGCATTTTTGCAAGGGAGA................................................................................................22200.0511000
....................................................TACCTGCTGACAGGTCACGGT-...........................................................................................................................21200.0511000
..........................TTTGG-ATTCTCGATGAGGAC-GTCTTACA.............................................................................................................................................28200.0511000
..........................................AGGAC-GTCTTACCTGCTGACA.....................................................................................................................................21200.0511000
...................TCCAAGCTTTGG-ATTCTCGATGAGGAA-C....................................................................................................................................................28200.0511000
..........................TTTGG-ATTCTCGATGAGGAC-GTC..................................................................................................................................................23200.0510100
.................................TTCTCGATGAGGAC-GTCTTACCTGCTGAC......................................................................................................................................29200.0511000
droYak3
CACTCTCGTTTTCG-G-GATCAAAAGTTTGG-TTTTTCGATGAAGGC-GTCTTTCTTGCTTACTGGGCACTGG-TCGTTCAATGCATTTTTGCACGGGAG-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................GTTCAATGCATTTTTGCACGGGAG-------------------------------------------------------------------------------------------------2445.0020000000000020
.......................................................TTGCTTACTGGGCACTGG-TCGTTCAATG.................................................................................................................2833.6711000000000011
............................................GGC-GTCTTTCTTGCTTACTGGGCAC...............................................................................................................................2532.33704000000003
............................................GGC-GTCTTTCTTGCTTACTGGGCA................................................................................................................................2431.67505000000000
............................................GGC-GTCTTTCTTGCTTACTGGGC.................................................................................................................................2331.33403100000000
......................................................................TGG-TCGTTCAATGCATTTTTGCACG.....................................................................................................2540.50202000000000
............................................GGC-GTCTTTCTTGCTTACTGGGCACT..............................................................................................................................2630.33101000000000
................................................GTCTTTCTTGCTTACTGGGCACT..............................................................................................................................2330.33101000000000
.......................................................TTGCTTACTGGGCACTGG-TC.........................................................................................................................2030.33101000000000
.......................................................TTGCTTACTGGGCACTGG-TCGTT......................................................................................................................2330.33101000000000
.......................................................TTGCTTACTGGGCACTGG-TCGTTC.....................................................................................................................2430.33101000000000
.......................................................TTGCTTACTGGGCACTGG-TCGTTCAATT.................................................................................................................2830.33101000000000
.......................................................TTGCTTACTGGGCACTGG-TCGTTCTT...................................................................................................................2640.25101000000000
......................................................................TGG-TCGTTCAATGCATTTTTGCACGGG...................................................................................................2740.25101000000000
......................................................................TGG-TCGTTCAATGCATTTTTGCAC......................................................................................................2440.25101000000000
.....TCGTTTTCG-G-GATCAAAAGTTTGG-T....................................................................................................................................................................2540.25101000000000
......................................................................TGG-TCGTTCAATGCATTTTTGCACGG....................................................................................................2640.25101000000000
.................................................................GGCACTGG-TCGTTCAATGCATTTTTGC........................................................................................................2740.25101000000000
............................................................TACTGGGCACTGG-TCGTTCAATGCAC..............................................................................................................2640.25101000000000
...............................................................TGGGCACTGG-TCGTTCAATGCATT.............................................................................................................2440.25101000000000
......................................................................TGG-TCGTTCAATGCATTTTTGCATTT....................................................................................................2640.25100010000000
...........................................................TTACTGGGCACTGG-TCGTTCAATGC................................................................................................................2540.25101000000000
...........................................................TTACTGGGCACTGG-TCGTTCAATGCA...............................................................................................................2640.25101000000000
.............................................GC-GTCTTTCTTGCTTACTGGGCAC...............................................................................................................................2440.25100100000000
droEre2
CACCCTCGTCTATCGG-GATCCGAATTTTGG-TTTCTCGATGATGGCGTCTTTTCTTGCTCACTGGGCACGGG-TCGTTCAACGCATTTCTGCATGGGAGAGCCC-TTAGCGATA----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................TTCTTGCTCACTGGGCACGGG-TCGTT......................................................................................................................26180.941700000017
.....................CGAATTTTGG-TTTCTCGTC............................................................................................................................................................1960.6743000100
.............................................................................TTCAACGCATTTCTGCATGGGAGAGC..............................................................................................26200.601200000012
....................................................................................CATTTCTGCATGGGAGAGCCC-TTAG.......................................................................................2540.5022000000
...................TCCGAATTTTGG-TTTCTCGATGATGGCG.....................................................................................................................................................2830.3311000000
......................GAATTTTGG-TTTCTCGATGATGGCGT....................................................................................................................................................2630.3310000010
..........TATCGG-GATCCGAATTTTGG-TTTC.................................................................................................................................................................2430.3310100000
....................................................................................CATTTCTGCATGGGAGAGCCC-T..........................................................................................22200.3066000000
....................................................................................CATTTCTGCATGGGAGAGCCC-...........................................................................................21200.3066000000
....................................................................................CATTTCTGCATGGGAGAGCCC-TTA........................................................................................2440.2511000000
....................................................................................CATTTCTGCATGGGAGAGCCC-TT.........................................................................................2340.2511000000
....................................................................................CATTTCTGCATGGGAGAGCCC-TTAT.......................................................................................2540.2511000000
CACCCTCGTCTATCGG-GATC................................................................................................................................................................................2040.2511000000
......................GAATTTTGG-TTTCTCGTC............................................................................................................................................................18120.2533000000
........................................................TGCTCACTGGGCACGGG-TCGTTCAAAA.................................................................................................................27190.2140000004
......................................................CTTGCTCACTGGGCACGGG-TCGTTCA....................................................................................................................26200.2040000004
....................CCGAATTTTGG-TTTCTCGTCC...........................................................................................................................................................2160.1710000100
.............................GG-TTTCTCGATGATGGCGTCT..................................................................................................................................................21200.1020000200
.................................TTCTCGATGATGGCGTCT..................................................................................................................................................18200.1021000010
..........................TTTGG-TTTCTCGATGATGGCGTC...................................................................................................................................................23200.1021000010
............................TGG-TTTCTCGATGATGGCGTCT..................................................................................................................................................22200.1021000100
............................................................CACTGGGCACGGG-TCGTTCAACGCA...............................................................................................................25170.0611000000
....................................................TTCTTGCTCACTGGGCACGGG-TCG........................................................................................................................24180.0611000000
.....................................................TCTTGCTCACTGGGCACGG.............................................................................................................................19200.0510000010
............................TGG-TTTCTCGATGATGGCGTCTT.................................................................................................................................................23200.0511000000
.............................GG-TTTCTCGATGATGGCGTCTTT................................................................................................................................................23200.0511000000
.....................................................................................ATTTCTGCATGGGAGAGCCC-T..........................................................................................21200.0511000000
................................TTTCTCGATGATGGCGTCTTT................................................................................................................................................21200.0511000000
....................................................TTCTTGCTCACTGGGCACGGG-C..........................................................................................................................22200.0510000001
................................TTTCTCGATGATGGCGTCT..................................................................................................................................................19200.0510000100
...........................TTGG-TTTCTCGATGATGGCGTCTTT................................................................................................................................................25200.0511000000
.........................TTTTGG-TTTCTCGATGATGGCGTCT..................................................................................................................................................25200.0510000010
..........................TTTGG-TTTCTCGATGATGGCGTCT..................................................................................................................................................24200.0511000000
...................................................TTTCTTGCTCACTGGGCACGG.............................................................................................................................21200.0511000000
..............................G-TTTCTCGATGATGGCGTCT..................................................................................................................................................20200.0510000100
...........................TTGG-TTTCTCGATGATGGCGTC...................................................................................................................................................22200.0510000100
...........................TTGG-TTTCTCGATGATGGCGTCT..................................................................................................................................................23200.0510000100
.......................AATTTTGG-TTTCTCGATGATGGCGTC...................................................................................................................................................26200.0510000100
..........................TTTGG-TTTCTCGATGATGGC......................................................................................................................................................20200.0511000000
..............................................................................TCAACGCATTTCTGCATGGGAGAG...............................................................................................24200.0510000100
.........................TTTTGG-TTTCTCGATGATGGCGTCC..................................................................................................................................................25200.0511000000
....................................................TTCTTGCTCACTGGGCACGGG-...........................................................................................................................21200.0511000000
.......................AATTTTGG-TTTCTCGATGATGGCGT....................................................................................................................................................25200.0510000100
..............................................................................TCAACGCATTTCTGCATGGGAGAGCCC-...........................................................................................27200.0511000000

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