ID:

dvi_3222

Coordinate:

scaffold_12855:114114-114264 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.7 -15.6 -15.6

Flybase annnotation

exon [dvir_GLEANR_10500:1]; CDS [Dvir\GJ10587-cds]; intron [Dvir\GJ10587-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron+
mature
  1. scaffold_10322:159251-159268 +
  2. scaffold_12723:376258-376275 +
  3. scaffold_12758:805113-805130 +
  4. scaffold_12822:3265417-3265434 +
  5. dvi_3222  scaffold_12855:114206-114223 +
  6. scaffold_12855:165437-165454 +
  7. dvi_3261  scaffold_12855:244527-244544 +
  8. scaffold_12932:307059-307076 +
  9. scaffold_12963:338043-338060 +
  10. scaffold_12963:2107124-2107141 +
  11. scaffold_12963:9666957-9666974 +
  12. scaffold_12963:14778669-14778686 +
  13. scaffold_12970:34487-34504 +
  14. scaffold_12970:5406606-5406623 +
  15. scaffold_13036:618111-618128 +
  16. scaffold_13047:15103322-15103339 +
  17. scaffold_13049:13872143-13872160 +
  18. scaffold_13049:14263969-14263986 +
  19. scaffold_13049:17565359-17565376 +
  20. scaffold_13052:1201949-1201966 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCCATGACCTCATATTTCCACATAAGCCAGGCATCATCATGATACCTGAGGTGAGTAAACCTCTTAAACATCCATTGTCCTTAAATTTATATATGTATATTTATACTCATTGAAAATAAGTAAAAGGGGTATAATATTTTTGTGCAAATGTATGTAACAGCGAGAAAAAAGCATCTCTGAACCCAAAAAGTATGTATGTATATTATTGATCAGCACAACTAGCCGAGTCGATCAAGCCATGTCCATCAATT
**************************************************.((((.......)))).(((.....)))..........((((((((((((((.((((.(((...))).))))...(((((((((.....))))))...(((.....)))..((((........))))....)))...))))))))))))))**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
V047
embryo
M047
female body
SRR060674
9x140_ovaries_total
SRR060682
9x140_0-2h_embryos_total
SRR060683
160_testes_total
................................................................CAAACATCCTTTGCCCTTAAATTT................................................................................................................................................................... 24 3 3 0.33 1 1 0 0 0 0 0
.................................ACCTCATGATACCTGAGG........................................................................................................................................................................................................ 18 2 4 0.25 1 0 1 0 0 0 0
...................................ACCATGATGCCTGAGGGGA..................................................................................................................................................................................................... 19 3 6 0.17 1 0 0 1 0 0 0
............................................................................................................................................................................ATCTCTTAACCCAATAAG............................................................. 18 2 11 0.09 1 0 0 1 0 0 0
...............................................................................................................................................GCAAATGTATGTACCAGCGTT....................................................................................... 21 3 12 0.08 1 0 1 0 0 0 0
........................................................................................................................................................TGTAATAGCGTGAAAAAA................................................................................. 18 2 17 0.06 1 0 0 0 1 0 0
....................CCTCAGACAGGCATCATCA.................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0
...................................CGCATGATACCTGAGGGG...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................TGCAAATGTATGTAACAG........................................................................................... 18 0 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

GGGTACTGGAGTATAAAGGTGTATTCGGTCCGTAGTAGTACTATGGACTCCACTCATTTGGAGAATTTGTAGGTAACAGGAATTTAAATATATACATATAAATATGAGTAACTTTTATTCATTTTCCCCATATTATAAAAACACGTTTACATACATTGTCGCTCTTTTTTCGTAGAGACTTGGGTTTTTCATACATACATATAATAACTAGTCGTGTTGATCGGCTCAGCTAGTTCGGTACAGGTAGTTAA
**************************************************.((((.......)))).(((.....)))..........((((((((((((((.((((.(((...))).))))...(((((((((.....))))))...(((.....)))..((((........))))....)))...))))))))))))))**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
SRR1106729
mixed whole adult body
SRR1106728
larvae
SRR060671
9x160_males_carcasses_total
SRR060676
9xArg_ovaries_total
SRR060674
9x140_ovaries_total
V053
head
..................................................................................................................................................................................................................GTCGTGTTGATCGGCTCAGCTAGT................. 24 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................TGTAGGTAACAGGAAT........................................................................................................................................................................ 16 0 2 0.50 1 0 1 0 0 0 0 0
...................................................................TGTAGGTAACAGGAA......................................................................................................................................................................... 15 0 2 0.50 1 0 0 1 0 0 0 0
...............................................................................................................................................................CGCCCTTTGTTTGTAGAGAC........................................................................ 20 3 4 0.25 1 0 0 0 1 0 0 0
...............................................................................................AAATAAATATGAGTAACT.......................................................................................................................................... 18 1 5 0.20 1 0 0 0 0 1 0 0
.......................................................................................................................................TAAAAACACGTTTAAATACATTGT............................................................................................ 24 1 6 0.17 1 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................CGGCTCAGCTAGTTCGGTACAGG....... 23 0 14 0.07 1 0 1 0 0 0 0 0
....................................................CGCATTTGGAGAATTGGTC.................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................CGGCTCAGCTAGTTCGGTACA......... 21 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................TGTAGGTAACAGAAA......................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0
...................................................................TGTAGGTAACAGGAC......................................................................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0
........................................................................................................................................AAAAACACGTTTACATACATTG............................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:114064-114314 + dvi_3222 CC------------CAT------GACC--------------------------------------------------TCATATTT--------------------CCACA--------------------------TAAGCC-----------------------------AGGC-AT---CATCATGATAC--------CTGAGGTGAGTAAACCT-----------------------------------------------CTTAAACA-TCCAT--------TG--------TCCTTAAATT----------------------------------------------------------------------------------------------------------------------------------------------TATATATGTATATTTA-TACTCATTGAAAATA--AG-TAAAAGGGGTATAATATTTTTGTGCAAA-------TGTATGTAACAGCGAGAAAAAAGCATCTCTGAACCCAAAAAGTATGTATGTATATTATTGATCAGCACAACTAGCCGAGTCGATCAAGCCATGTCCA----------------TCAATT
droMoj3 scaffold_6680:22048549-22048794 - TA------------ACC----------TG--------A------------------------------------------TTGTT--------------------CTTCGTAAACTTTT-AAT----------------------------------------------------------------GAACT--------CTGAATTTAT-----------------------------------------------TAAAATTTTA-AAAA-TTTAT--------TTTTATTATTTCTTA------------------------------------------------------------------------------------------------------------------------------------TTA---TTATTTCCC-----ATTTATTTTTATTTCCCATTGAAAATG--GG-AAATCAAGGTATAATGGTTTTGT-GAAA-------AGTATGTAACAGGCAAAAGGAATCATCGCAGACCCCATAATGTAT----ATAAATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCTTTGTCCG----------------TCTATT
droGri2 scaffold_15126:3460633-3460846 - TG------------AAG--------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAATCTATTCAACATTTTCGGGTCACATTATAATTATTATTATTATGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-TATTTACTG-AACCCATTAAAATTC--TGGTAAAAAGATTAAACGGGTTTTGTGCAAA-------AGTATGTAACAGAGAGAAGAAGGCATCTACGACCCCATTAAGTAT----ATATATTCTTGATCAGAATCAGCAGCCGAGTCGATATAGCCATGTCCG----------------TCTG--
droWil2 scf2_1100000004967:614618-614868 + TC------------TAT------AAAG--------------------------------------------------TCGTATTTTC--------------------ATG--------------------------TAAACC-----------------------------CC-TAGA-C-TATAATTATAT--------C---G-----------------------------------------------TTAAATA---------------------AAACCCCA--------CATATA--TATATGTATTTTTTAAAT-----------ACAA--T--------GTTA----GTTCT----------------------------ATAACAAT-----------------------------------------------------TGTAGTAATTATTA-TACCCTT-----GCA---------GAGGGTATTATAAAATTGGTCAGA-------TGTTTGTAACGCACAGAAAAAGGCGTTTCCTACCCCATAAGGTAT----ATATATTCTTTATCAGCGTAAGAATCTGAGTCGATATAGCCATGTCCG----------------T-----
dp5 Unknown_group_13:19900-20155 + ACC-ACTTTTTTCAACA-------GCT----------------------------------------------------------------------------------------------------------------TCC-----------------------------A----CTCTTTATCCTGCGACGTGTAATGAGAA-----GTGTAC------------------------------------------CGGTGTTCTA-TAAATTCCAT--------------TACATCTTGCA-----------------------------------------------------------------------------------------ATGCT-----------------------------------------------------TGGATCTTTTTTTA-TACCCGATACTCAAAATGA-GTATTGGGGTATATTAGATTTGTGGTAAAAGTGTATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTAT----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTG----------------TC----
droPer2 scaffold_161:46055-46293 + AC------------ACC----------ATGTTTTTTACTA--------------------------------------------------------------------------------------------------AACC-----------------------------AAGT-GC---TAACAAAATTC--------T-------ATCGAATCG-----------------------------------------------CTTAAAAA-GCC-------------------------------------------------GTGGAGAAAAAT----------------------------------------------------------------------------------------------------------TTTGTT---TTTATCTTTTTA-TACCCGATACTCAAAATGA-GTATTGGGGTATTTTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGAACCCATAAAGTAT----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTG----------------TC----
droAna3 scaffold_12948:432947-433178 - CA------------CAGATCC-------A--------------CATCA--CAAGCACAGGAT--TCTGCCTGGGATGTCGGTATTCC--------------------ATC--------------------------TTGACC-----------------------------------------------------------------------------------------------------------------------------------CCCA----AGACTCA--------TCTTTGAATT--------TT-----------------------T--------G---GAAAG-------------------------------------------------------------------------------------------------TTCGTTTTTA-TACCCTT-----GCA---------GAGGGTATTATAATTTTGGTCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTGTAAAGCAT----ATATATTCTTGATCAGGATCACCTCCTGAGTCGATATAAGCATGTCCG----------------TCTGTC
droBip1 scf7180000396108:1588-1812 - AT------------AT---------------TTTTTTATA--------------------------------------------------------------------------------------------------AAAC-----------------------------AG-TAAA---AAACA------------------------------------------------------------------TGAAAGG---------------------AAAGCTAA--------CTTCG-----------------------------------------------------------------------------------------------------------------GGAAATGTACAATTTTCTGGCGGCGTAAAT--TATTTAAACCTATTTTTA-TACCCTT-----GCA---------GAGGGCATTATAATTTTGTCCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTAT----ATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCG----------------TC----
droKik1 scf7180000301661:4146-4372 + AC------------CAC------GCCC-A-------------------------------------------------C-------------------AAA-TACCCC--------------------------TTTTAAAA-----------------------------GGGT-AT---CAAAG------------------------------------------------------------------TGA-----------A----------AAAATAAT-------------------------------------------------------TTTTTTCA--------------------------------------------ATGAA------------------------AACAATTTTTAAACA---AAAATTTGTA---T-TTAATTTTTA-TACCCTT----------------GCAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGATGTTTCCGACCCTATAAAGTAT----ATATATTCTTGATCAGCATCAAAAGCCGAGTCGATCTAGCCATGTCCG----------------TC----
droFic1 scf7180000449266:20531-20726 + AA------------TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACT-----------------------------------------------T--------------------------------------------------------------------------T--------T---AAAAG-----TTTGAGCAATTTCCACT-AGATCAGTACT---------------------------------------------------------ATTA---ACATTTTTA-TACCCTT-----GCA--GA-GCAA-AGGGTATTATAATTTTGGCCAGA-------AGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTAT----ATATATTCTTGATCAGCATCACGATCTGAGTCGAAATACGTCTGTCCG----------------TCTGTC
droEle1 scf7180000491024:414360-414612 + CC------------ATG---------------CTCTGACTCTC-------------------------------------------C--------------------ACA--------------------------CAAGCCCAATTACAGGGTACCACTGGGGTGAATCC-----------------------------------------AAATT-----------------------------------------------GCG----------G--------------AACAACGATAA-----------------------------------------------------------------------------------------TGGCC------------------------------------------------------TTGCTTATTTTTA-CAAACGTTACTCTTA--GA-GTAAAAGGGGGTATTGTATTCGTTAAAA-------TGTATGTGACAGGTAGAAGGAAGCGTTTCCGACCCCATAAAGTAT----ATATATTCTGACTCAGGATCAATAGCCGAGTCGATCTAGCCATGTCCTTCTGTCTGTCTGTCCGTCTGTA
droRho1 scf7180000762933:523-785 - CC------------CAATTTCACGACTTC--------A------------------------------------------TATAT--------------------CCCCGGA--------------------------------GTAATAATAAAACACTGG---TAATTC-----------------------------------------AAATT-----------------------------------------------TCA----------A--------------AAAA--------AATTTATATGACTCGAAATCAGTGGAGA--------------------------GCGATGTGA----------------------TA---------------------------------------------------------AACA---ATATTTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTAT----ATATTTTCTTGATCAGGATCACTAGCCGAGTCGATATAGCCATGTCCG----------------TCTGTC
droBia1 scf7180000302255:99716-99923 + TA------------TAT--------------TT--------------------------------------------------------------------------ACA--------------------------TAAGCC-----------------------------GT-CA-T---------AATA------------------------------------ATC----------------------------------GGA-AAAA-A-----------------------------------------------------------ACTT--T--------TTAA----TTATA----------------------------TT---------------------------------------------------------TTTA---GTATTTTTA-TACCCGTTACTCGAC--GA-GTAGAACGGTATACTAGATGCATCGGAA-------AGTATGTAACAGGTAA-AAGAAGCGCTTCCGACCGCATAAAATAT----ATATATTCTTGATCAGGATCACTTGCAGAGTCGATCTAGGCATGTCCG----------------TCTGTC
droTak1 scf7180000415867:827627-827847 + ACTTAA--------TAT--------------TT---------ACATGAAAGTTTTCACG-ATATCCTG----------C-------------------TAA-AACCTC--------------------------AT----------------------------------------------------------------------------------------------------------AATGATTGTAAGTAAG------------------------------------------------------------------------------------------G--GTG-------------------------------------------------------------------------------------------------GAATGTGTGTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCCATAAAGTAT----ATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCG----------------TC----
droEug1 scf7180000408193:237922-238142 - AC------------CGT---------------CTT--------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------AGA--------------------------ACGACGTGAGCAAGTGCCTTATGG--------------------------------AATAATCAATTATCTTCTGACAAGTTAAAT--ATTTTA---ATATTTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTAT----ATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCG----------------TC----
dm3 chr3R:27869977-27870193 + CA------------AGG-------GCT----------------------------------------------------------------------------------------------------------------AGA--------------------------------G-ATAA---TCAACATAC--------T--AGGTAGGTAAAC-----------------------------------------------------------------------------------------------------------------------------TTTTTTCA--------------------------------------------ATGCATTGATCAACATTAATAGG-------------------------------------------CAACAG-CAGAAATTACTTGTA--GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTACCAGGCAGAAGGAAGCGTTTCAGAGCATATAAAGTAT----ATATATTCTTGATCAGGAACAATAGCTGAGTGGATCTGGCCACGAACG----------------TCGA--
droSim2 4:74042-74250 - CA------------TAT--------------TTTCTTATAATC-------------------------------------------CATTCACGCGGCTTGTT--ATTTG----------------------------------------------------------------------------------------------A-----------------------------------------------TTAAATAAAATAAAT-AAAA-T-----------------------------------------------------------ACAT--T--------TTGG----CTTGA----------------------------TT---------------------------------------------------------AACA---AGGTAATTA-TACCCGTTACTCGTA--GA-GTAAAAGAGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCCTATAATGTGT----ATATATTCTTGA----------------------------CGTCTCCG--------TCTG----TACGTT
droSec2 scaffold_6:142379-142586 - CA------------CACATCA-------G--------------C------------------------------------------------------ACGAT--AATTGAAAATTGAC-GATGAAT------------------------------------------------------------------------------------AAAATG-----------------------------------------------CTG----------A--------------AATAA--------------------------------------------------------------------------------------------------------------------------------------------------CTTGCC---CC-GGTTTATTA-TGCCCGTTGATCGTA--TA-CGACAATGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGTAGAAGGAAGTGTTTCCGACCATATAAGGTTT----AAATATTCTTGATCAGGATCAATAGTCCATCCGACTCGG-----TCCG----------------TCCGTA
droYak3 2L:9187030-9187290 - CA------------TAA--------------TT--------------------------------------------TTATATTTCCTTTCAAGAA----------CACA--------------------------TAAGCC-----------------------------GC-GA-TAG---TTATTATA-------------------------------------------------------------TTAGTTATTATTTGT------TCCA----AAACCCA--------TCCTTA--TATACACATGCCCCA---------------AATTTT--------G--GTA-------------------------------------------------------------------------------------------------GTTTCCATTTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTAT----ATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCG----------------TC----
droEre2 scaffold_250:751-972 - AT------------AT---------------TTCCTAATAGTACATTAGATAAGTAACGGAT--------------------------------------------------ATCTGATAAACGAGTAAACCGCCT----------------------------------------------------------------------------------------------------------ATAGAGTGT-------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------GTCA---TGGTTTTTA-TACCCGTTACTCGTA--GA-GTGAAAGGGTATACTAGATTCGTTGAAA-------AG----TAACAAGCAAAATGAAGTGTTTCCGACTATATAAAGTAT----ATATATTCTTGATCAGGATAAAAAGCCGAGTTGAACTGATCATGTCCG----------------TACGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CC------------CAT------GACC--------------------------------------------------TCATATTT--------------------CCACA--------------------------TAAGCC-----------------------------AGGC-AT---CATCATGATAC--------CTGAGGTGAGTAAACCT-----------------------------------------------CTTAAACA-TCCAT--------TG--------TCCTTAAATT----------------------------------------------------------------------------------------------------------------------------------------------TATATATGTATATTTA-TACTCATTGAAAATA--AG-TAAAAGGGGTATAATATTTTTGTGCAAA-------TGTATGTAACAGCGAGAAAAAAGCATCTCTGAACCCAAAAAGTATGTATGTATATTATTGATCAGCACAACTAGCCGAGTCGATCAAGCCATGTCCA----------------TCAATTSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAA-------TGTATGTAACAG...........................................................................................................18200.051000000000000000000000000000000000100000000000000000000000000000
droMoj3
TA------------ACC----------TG--------A------------------------------------------TTGTT--------------------CTTCGTAAACTTTT-AAT----------------------------------------------------------------GAACT--------CTGAATTTAT-----------------------------------------------TAAAATTTTA-AAAA-TTTAT--------TTTTATTATTTCTTA------------------------------------------------------------------------------------------------------------------------------------TTA---TTATTTCCC-----ATTTATTTTTATTTCCCATTGAAAATG--GG-AAATCAAGGTATAATGGTTTTGT-GAAA-------AGTATGTAACAGGCAAAAGGAATCATCGCAGACCCCATAATGTAT----ATAAATTCTTGATCAGGACGACGAGCTGAGTCGATATAGCTTTGTCCG----------------TCTATTSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGGAATCATCGCAGACCCCA..................................................................................2580.131100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAATCATCGCAGACCC....................................................................................21110.091100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATCATCGCAGACCCC...................................................................................21110.091100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--GG-AAATCAAGGTATAATGGTT.......................................................................................................................................23200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGACGACGAGCTGAGTCG.....................................26200.051000100
droGri2
TG------------AAG--------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAATCTATTCAACATTTTCGGGTCACATTATAATTATTATTATTATGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-TATTTACTG-AACCCATTAAAATTC--TGGTAAAAAGATTAAACGGGTTTTGTGCAAA-------AGTATGTAACAGAGAGAAGAAGGCATCTACGACCCCATTAAGTAT----ATATATTCTTGATCAGAATCAGCAGCCGAGTCGATATAGCCATGTCCG----------------TCTG--SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droWil2
TC------------TAT------AAAG--------------------------------------------------TCGTATTTTC--------------------ATG--------------------------TAAACC-----------------------------CC-TAGA-C-TATAATTATAT--------C---G-----------------------------------------------TTAAATA---------------------AAACCCCA--------CATATA--TATATGTATTTTTTAAAT-----------ACAA--T--------GTTA----GTTCT----------------------------ATAACAAT-----------------------------------------------------TGTAGTAATTATTA-TACCCTT-----GCA---------GAGGGTATTATAAAATTGGTCAGA-------TGTTTGTAACGCACAGAAAAAGGCGTTTCCTACCCCATAAGGTAT----ATATATTCTTTATCAGCGTAAGAATCTGAGTCGATATAGCCATGTCCG----------------T-----SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTATAAAATTGGTCAGA-------TGT....................................................................................................................24200.10200200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGA-------TGTTTGTAACGC...........................................................................................................18200.10220000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGA-------TGTTTGTAACGCACAGA......................................................................................................22200.10200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAGA-------TGTTTGTAACGC...........................................................................................................22200.10220000
...............................................................................................................................................................................................T--------C---G-----------------------------------------------TTAAATA---------------------AAACCCCA--------CATA...................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCGATATAGCCATGTCCG----------------......22200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATTGGTCAGA-------TGTTTGTAACGCAC.........................................................................................................28200.05100010
...........................................................................................................................................................................................TATAT--------C---G-----------------------------------------------TTAAATA---------------------AAACCCCA--------CATAT..................................................................................................................................................................................................................................................................................................................................................27200.05101000
...........................................................................................................................................................................................TATAT--------C---G-----------------------------------------------TTAAATA---------------------AAACCCCA--------CATA...................................................................................................................................................................................................................................................................................................................................................26200.05101000
dp5
ACC-ACTTTTTTCAACA-------GCT----------------------------------------------------------------------------------------------------------------TCC-----------------------------A----CTCTTTATCCTGCGACGTGTAATGAGAA-----GTGTAC------------------------------------------CGGTGTTCTA-TAAATTCCAT--------------TACATCTTGCA-----------------------------------------------------------------------------------------ATGCT-----------------------------------------------------TGGATCTTTTTTTA-TACCCGATACTCAAAATGA-GTATTGGGGTATATTAGATTTGTGGTAAAAGTGTATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTAT----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTG----------------TC----SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTATATTAGATTTGTGG.................................................................................................................................21201.853703700000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTG.................................................................................................................23201.8537020000013310
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTG...................................................................................................................21201.402802000007010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTC......................................24200.851700000000170
...........................................................................................................................................TCC-----------------------------A----CTCTTTATCCTGCGACGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.8290900000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGT..................................................................................................................22200.75150010106430
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGA....................................22200.551101100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGT....................................................................................................................20200.50100300000160
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATTGAGCCATGTCTG----------------......20200.4590900000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGGGTATATTAGATTTG....................................................................................................................................21200.4590900000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGT................................................................................................................24200.4590800000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATTG.................................19200.4080800000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTGTG.................................................................................................................22200.4080300000500
...........................................................................................................................................TCC-----------------------------A----CTCTTTATCCTGCGACGTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.2730300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTA...............................................................................................................25200.2550200002100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATAGCCGA.........................................25200.2550500000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATG.....................................................................................................................19200.2040200000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGAATCGTTTCCGACCCCA..................................................................................24200.2040400000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCCATGTCTG----------------......26200.2040400000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTAACG............................................................................................................28200.2040300000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACCCCATAAAGTAT----ATATA.................................................................28200.2040000000040
...........................................................................................................................................TCC-----------------------------A----CTCTTTATCCTGCGACGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.1820200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCG..........................................22200.1530300000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTATGTGTGTAACGTC..........................................................................................................19200.1530000003000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTAA..............................................................................................................26200.1530300000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTG...................................................................................................................20200.1020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGCCGAGTC......................................21200.1020000002000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCATAAAGTA...........................................................................29200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCGAG........................................25200.1020000000200
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAAGGAATCGTTTCCGACCCCAT.................................................................................26200.1020000000020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTAGATTTGTGGTAAAAG...........................................................................................................................22200.1020000000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTAT----ATATATTCTTGATCAGCA....................................................26200.1020000000200
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCCAT.................................................................................22200.1020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGAAGGAATCGTTTCCG........................................................................................21200.1020000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCATCAATAGCCGAGT.......................................21200.1020200000000
.............................................................................................................................................C-----------------------------A----CTCTTTATCCTGCGACGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.0810100000000
............................................................................................................................................CC-----------------------------A----CTCTTTATCCTGCGACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.0810100000000
.................................................................................................................................................................................TCTTTATCCTGCGACGTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.0710100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTGT..................................................................................................................21200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCGAT...................................27200.0510000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTAAAAGTGTATG.....................................................................................................................24200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTGTGT................................................................................................................23200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTATGTGTGTAACG............................................................................................................19200.0510000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAAGGAATCGTTTCCGACCCC...................................................................................24200.0510000000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATC.....................................................................................................................19200.0510000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTATGTGTGTAACGTCC.........................................................................................................19200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCCATGTCT.......................25200.0510010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGACCCCATAAAGTAT----ATATATTC..............................................................27200.0510000000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTAAAA............................................................................................................28200.0510000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTATGTGTGTAAC.............................................................................................................20200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTGTGGTAAAAGTGTA.......................................................................................................................21200.0510000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATTTGTGGTAAAAGTG.........................................................................................................................21200.0510000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGCCGAGTCGATTG.................................23200.0510000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGTATGTGTGT................................................................................................................22200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTAAAAGTGTATGTGT..................................................................................................................19200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAATAGCCGAGTCGA....................................21200.0510000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTAACGTCCAGAAGGAATCG..............................................................................................26200.0510000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAGCC.............................20200.0510000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTGTGTA...............................................................................................................24200.0510000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGA-GTATTGGGGTATATTAGA........................................................................................................................................26200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTA.................................................................................................................23200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTAAAAGTGTA.......................................................................................................................24200.0510000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGTATGTGTGTAACG............................................................................................................26200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAAAGTGTATGTGT..................................................................................................................23200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTAAAAGTGTATGTGTGTAAC.............................................................................................................24200.0510000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGTATGTGTG.................................................................................................................21200.0510000000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCGACCCCATAAAGTA...........................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCCA............................20200.0510000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----ATATATTCTTGATCAGCATCAATAGCC...........................................29200.0510010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGTATATTAGATTTGTGGT................................................................................................................................24200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATTGAGC..............................22200.0510000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTGTGTAACGTCCAGAAG....................................................................................................21200.0510000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATTGAGCCATGTCT.......................19200.0510000001000
droPer2
AC------------ACC----------ATGTTTTTTACTA--------------------------------------------------------------------------------------------------AACC-----------------------------AAGT-GC---TAACAAAATTC--------T-------ATCGAATCG-----------------------------------------------CTTAAAAA-GCC-------------------------------------------------GTGGAGAAAAAT----------------------------------------------------------------------------------------------------------TTTGTT---TTTATCTTTTTA-TACCCGATACTCAAAATGA-GTATTGGGGTATTTTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGAACCCATAAAGTAT----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTG----------------TC----SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAGAAGGAATCGTTTCCGAAA.....................................................................................27200.357070000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAGAAGGAATCGTTTCCGAA......................................................................................26200.153030000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAACGTCCAGAAGGAATCG..............................................................................................23200.153030000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCAAAATGA-GTATTGGGGTATT.............................................................................................................................................25200.102020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTTCCGAA......................................................................................22200.102000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGATGTGTGTAACGTC..........................................................................................................20200.102000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAATGA-GTATTGGGGTATT.............................................................................................................................................22200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAGAAGGAATCGTTTCCGA.......................................................................................25200.051001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCAAAATGA-GTATTGGGGTAT..............................................................................................................................................24200.051001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTTCCGAACCCAT.................................................................................27200.051010000
droAna3
CA------------CAGATCC-------A--------------CATCA--CAAGCACAGGAT--TCTGCCTGGGATGTCGGTATTCC--------------------ATC--------------------------TTGACC-----------------------------------------------------------------------------------------------------------------------------------CCCA----AGACTCA--------TCTTTGAATT--------TT-----------------------T--------G---GAAAG-------------------------------------------------------------------------------------------------TTCGTTTTTA-TACCCTT-----GCA---------GAGGGTATTATAATTTTGGTCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTGTAAAGCAT----ATATATTCTTGATCAGGATCACCTCCTGAGTCGATATAAGCATGTCCG----------------TCTGTCSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACGCAGTGAAGGAGACATCT...........................................................................................25200.459900000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCGATATAAGCATGTCC.......................21200.153300000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAT----ATATATTCTTGATCAGGATCACCT..............................................2990.111010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAT----ATATATTCTTGATCAGGATCACC...............................................2890.111010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGTCGATATAAGCATGT.........................21200.051000010
droBip1
AT------------AT---------------TTTTTTATA--------------------------------------------------------------------------------------------------AAAC-----------------------------AG-TAAA---AAACA------------------------------------------------------------------TGAAAGG---------------------AAAGCTAA--------CTTCG-----------------------------------------------------------------------------------------------------------------GGAAATGTACAATTTTCTGGCGGCGTAAAT--TATTTAAACCTATTTTTA-TACCCTT-----GCA---------GAGGGCATTATAATTTTGTCCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTAT----ATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCG----------------TC----SizeHit CountTotal NormTotal
No Reads
droKik1
AC------------CAC------GCCC-A-------------------------------------------------C-------------------AAA-TACCCC--------------------------TTTTAAAA-----------------------------GGGT-AT---CAAAG------------------------------------------------------------------TGA-----------A----------AAAATAAT-------------------------------------------------------TTTTTTCA--------------------------------------------ATGAA------------------------AACAATTTTTAAACA---AAAATTTGTA---T-TTAATTTTTA-TACCCTT----------------GCAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGATGTTTCCGACCCTATAAAGTAT----ATATATTCTTGATCAGCATCAAAAGCCGAGTCGATCTAGCCATGTCCG----------------TC----SizeHit CountTotal NormTotal
No Reads
droFic1
AA------------TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACT-----------------------------------------------T--------------------------------------------------------------------------T--------T---AAAAG-----TTTGAGCAATTTCCACT-AGATCAGTACT---------------------------------------------------------ATTA---ACATTTTTA-TACCCTT-----GCA--GA-GCAA-AGGGTATTATAATTTTGGCCAGA-------AGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTAT----ATATATTCTTGATCAGCATCACGATCTGAGTCGAAATACGTCTGTCCG----------------TCTGTCSizeHit CountTotal NormTotal
No Reads
droEle1
CC------------ATG---------------CTCTGACTCTC-------------------------------------------C--------------------ACA--------------------------CAAGCCCAATTACAGGGTACCACTGGGGTGAATCC-----------------------------------------AAATT-----------------------------------------------GCG----------G--------------AACAACGATAA-----------------------------------------------------------------------------------------TGGCC------------------------------------------------------TTGCTTATTTTTA-CAAACGTTACTCTTA--GA-GTAAAAGGGGGTATTGTATTCGTTAAAA-------TGTATGTGACAGGTAGAAGGAAGCGTTTCCGACCCCATAAAGTAT----ATATATTCTGACTCAGGATCAATAGCCGAGTCGATCTAGCCATGTCCTTCTGTCTGTCTGTCCGTCTGTASizeHit CountTotal NormTotal
No Reads
droRho1
CC------------CAATTTCACGACTTC--------A------------------------------------------TATAT--------------------CCCCGGA--------------------------------GTAATAATAAAACACTGG---TAATTC-----------------------------------------AAATT-----------------------------------------------TCA----------A--------------AAAA--------AATTTATATGACTCGAAATCAGTGGAGA--------------------------GCGATGTGA----------------------TA---------------------------------------------------------AACA---ATATTTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTAT----ATATTTTCTTGATCAGGATCACTAGCCGAGTCGATATAGCCATGTCCG----------------TCTGTCSizeHit CountTotal NormTotal
No Reads
droBia1
TA------------TAT--------------TT--------------------------------------------------------------------------ACA--------------------------TAAGCC-----------------------------GT-CA-T---------AATA------------------------------------ATC----------------------------------GGA-AAAA-A-----------------------------------------------------------ACTT--T--------TTAA----TTATA----------------------------TT---------------------------------------------------------TTTA---GTATTTTTA-TACCCGTTACTCGAC--GA-GTAGAACGGTATACTAGATGCATCGGAA-------AGTATGTAACAGGTAA-AAGAAGCGCTTCCGACCGCATAAAATAT----ATATATTCTTGATCAGGATCACTTGCAGAGTCGATCTAGGCATGTCCG----------------TCTGTCSizeHit CountTotal NormTotal
No Reads
droTak1
ACTTAA--------TAT--------------TT---------ACATGAAAGTTTTCACG-ATATCCTG----------C-------------------TAA-AACCTC--------------------------AT----------------------------------------------------------------------------------------------------------AATGATTGTAAGTAAG------------------------------------------------------------------------------------------G--GTG-------------------------------------------------------------------------------------------------GAATGTGTGTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCCATAAAGTAT----ATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCG----------------TC----SizeHit CountTotal NormTotal
No Reads
droEug1
AC------------CGT---------------CTT--------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------AGA--------------------------ACGACGTGAGCAAGTGCCTTATGG--------------------------------AATAATCAATTATCTTCTGACAAGTTAAAT--ATTTTA---ATATTTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTAT----ATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCG----------------TC----SizeHit CountTotal NormTotal
No Reads
dm3
CA------------AGG-------GCT----------------------------------------------------------------------------------------------------------------AGA--------------------------------G-ATAA---TCAACATAC--------T--AGGTAGGTAAAC-----------------------------------------------------------------------------------------------------------------------------TTTTTTCA--------------------------------------------ATGCATTGATCAACATTAATAGG-------------------------------------------CAACAG-CAGAAATTACTTGTA--GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTACCAGGCAGAAGGAAGCGTTTCAGAGCATATAAAGTAT----ATATATTCTTGATCAGGAACAATAGCTGAGTGGATCTGGCCACGAACG----------------TCGA--SizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTACCAGGCAGA......................................................................................................2617.0070000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200110000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGAACAATAGCTGAGTGG.....................................2517.0070000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGAACAATAGCTGAGTGGA....................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTAT----ATATATTCTTGATCAGGA....................................................26203.70740000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000030000200001040000300100000000000000000000000000000000000000000002000000000000000000000160222170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAA-------AGTATGTACCAGGCAGA......................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----ATATATTCTTGATCAGG.....................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCGTTGAAA-------AGTATGTA...............................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAAGTAT----ATATATTCTTGATCAGGA....................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAT----ATATATTCTTGATCAGGA....................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTCGTTGAAA-------AGTAT..................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGTTTC..........................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CA------------TAT--------------TTTCTTATAATC-------------------------------------------CATTCACGCGGCTTGTT--ATTTG----------------------------------------------------------------------------------------------A-----------------------------------------------TTAAATAAAATAAAT-AAAA-T-----------------------------------------------------------ACAT--T--------TTGG----CTTGA----------------------------TT---------------------------------------------------------AACA---AGGTAATTA-TACCCGTTACTCGTA--GA-GTAAAAGAGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCCTATAATGTGT----ATATATTCTTGA----------------------------CGTCTCCG--------TCTG----TACGTTSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGCAGA......................................................................................................27203.907800000033260000190000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGAA.................................................................................................25202.8557000000000057000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGG...................................................................................................23201.5531000000000031000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGA..................................................................................................24201.3026000100000000250000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----ATATATTCTTGA----------------------------CGTCTCC.......................2111.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT----ATATATTCTTGA----------------------------CGTCT.........................2111.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA--GA-GTAAAAGAGTATAC............................................................................................................................................21170.8214000014000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATACTAGATTCGTTGAAA-------AGTA...................................................................................................................26130.771000000007030000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGAAA-------AGTAT..................................................................................................................24200.6012000000000012000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGAAG................................................................................................26200.6012000000000012000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATACTAGATTCGTTGAAA-------AG.....................................................................................................................24130.46600000003030000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCGTT............................................................................................17200.40800000000008000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA--GA-GTAAAAGAGTATACT...........................................................................................................................................22140.36500000000005000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGCAG.......................................................................................................26200.30600000000060000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCGT.............................................................................................24200.25500000000200030000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGG..........................................................................................................23200.25500050000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAGTATACTAGA........................................................................................................................................16190.21400000012001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA--GA-GTAAAAGAGTATACTAG.........................................................................................................................................24100.20200000000002000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GA-GTAAAAGAGTATACTAGATTCGTT..................................................................................................................................2860.17100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GA-GTAAAAGAGTATACT...........................................................................................................................................19180.17300000000003000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTCGTA--GA-GTAAAAGAGTAT..............................................................................................................................................24130.15200000000002000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAG...........................................................................................................15200.15300000000003000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGC...............................................................................................22200.15300000000003000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GA-GTAAAAGAGTATA.............................................................................................................................................17200.15300000000003000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAG....................................................................................................22200.10200000001000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCG..............................................................................................15200.10200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTCGTA--GA-GTAAAAGAGTATACTAGA........................................................................................................................................29100.10100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA--GA-GTAAAAGAGTATACTAGA........................................................................................................................................25100.10100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGTA--GA-GTAAAAGAGTATACTA..........................................................................................................................................25110.09100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA--GA-GTAAAAGAGTATACTA..........................................................................................................................................23120.08100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATACTAGATTCGTTGAAA-------AGTA...................................................................................................................25130.08100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGAGTATACTAGATTC.....................................................................................................................................21160.06100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA--GA-GTAAAAGAGTATA.............................................................................................................................................20170.06100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------AGTATGTAACAGGCAGAAGGAAGCGTT............................................................................................29200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTCGTA--GA-GTAAAAGAGTAA..............................................................................................................................................24200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------AGTATGTAACAGGCAGAAGGAA.................................................................................................24200.05100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAAA-------AGTATGTAACAGGCA........................................................................................................22200.05100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCGTTTCCGACC.....................................................................................26200.05100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCGTTTC..........................................................................................27200.05100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCGTTTCCGACC.....................................................................................24200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAA.................................................................................................18200.05100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTGAAA-------AGTATGTAACAGGC.........................................................................................................25200.05100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAGATTCGTTGAAA-------AGT....................................................................................................................20200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAG................................................................................................18200.05100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAACAGGCA........................................................................................................24200.05100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGAAGC...............................................................................................27200.05100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGTATACTAGAT.......................................................................................................................................16200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA--GA-GTAAAAGAGTA...............................................................................................................................................18200.05100000000001000000
droSec2
CA------------CACATCA-------G--------------C------------------------------------------------------ACGAT--AATTGAAAATTGAC-GATGAAT------------------------------------------------------------------------------------AAAATG-----------------------------------------------CTG----------A--------------AATAA--------------------------------------------------------------------------------------------------------------------------------------------------CTTGCC---CC-GGTTTATTA-TGCCCGTTGATCGTA--TA-CGACAATGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGTAGAAGGAAGTGTTTCCGACCATATAAGGTTT----AAATATTCTTGATCAGGATCAATAGTCCATCCGACTCGG-----TCCG----------------TCCGTASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGT.........................................................................................................24200.2044000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGTA........................................................................................................25180.1733000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGTAGT......................................................................................................27190.0511000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAAA-------AGTATGTAACAGGTAGA......................................................................................................25190.0510001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGAAA-------AG.....................................................................................................................21200.0510100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAAC.............................................................................................................20200.0511000
droYak3
CA------------TAA--------------TT--------------------------------------------TTATATTTCCTTTCAAGAA----------CACA--------------------------TAAGCC-----------------------------GC-GA-TAG---TTATTATA-------------------------------------------------------------TTAGTTATTATTTGT------TCCA----AAACCCA--------TCCTTA--TATACACATGCCCCA---------------AATTTT--------G--GTA-------------------------------------------------------------------------------------------------GTTTCCATTTTTA-TACCCGTTACTCGTA--GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTAT----ATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCG----------------TC----SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAGTAGCCGAGTC......................................27200.35707000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAGTAGCCGAGT.......................................25200.20400400000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAGTAGCCGA.........................................21200.15303000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGTTTCCGACC.....................................................................................23200.10200000020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTCGTA--GA-GTAAAAGGGT................................................................................................................................................21200.10200000020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATCAGTAGC............................................26200.05100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATCTGGCCATGTCCG----------------TC----22200.05101000000000
droEre2
AT------------AT---------------TTCCTAATAGTACATTAGATAAGTAACGGAT--------------------------------------------------ATCTGATAAACGAGTAAACCGCCT----------------------------------------------------------------------------------------------------------ATAGAGTGT-------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------GTCA---TGGTTTTTA-TACCCGTTACTCGTA--GA-GTGAAAGGGTATACTAGATTCGTTGAAA-------AG----TAACAAGCAAAATGAAGTGTTTCCGACTATATAAAGTAT----ATATATTCTTGATCAGGATAAAAAGCCGAGTTGAACTGATCATGTCCG----------------TACGTASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATAAAAAGCCGAG........................................2730.3311000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACTAGATTCGTTGAAA-------.......................................................................................................................20200.0510000100

Generated: 05/16/2015 at 09:09 PM