ID:

dvi_303

 Coordinate:

scaffold_12936:204946-204996 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.4 -20.4 -20.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Ulysses_I-intLTRGypsy-
mature
  1. scaffold_12936:201199-201222 -
  2. dvi_303  scaffold_12936:204947-204970 -
  3. scaffold_12936:223045-223068 -
star

Sense Strand Reads

AGAATGACAGATTGGGGTTCTGAAGCTGACGGAGCGTCAGCACTGCCACCGCCACGTCCGTCGGAAGGTCATCTAGTGGACTTGGAGAAGGAGATGGCGCAACATCACAGAACTCCACGGGACCTGGAATTCCCAAAGCCACAAAGGACTC
***********************************..............(((((..(((.((...(((((........)))))...)).)))..))))).................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060658
140_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 M047
female body
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR1106720
embryo_8-10h
 SRR1106718
embryo_6-8h
 SRR1106729
mixed whole adult body
 SRR060654
160x9_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 GSM1528803
follicle cells		 SRR060684
140x9_0-2h_embryos_total
 SRR060673
9_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR1106713
embryo_0-2h
 SRR1106722
embryo_10-12h
 M061
embryo
 SRR060670
9_testes_total
 SRR060659
Argentina_testes_total
 SRR1106712
embryo_0-2h
 SRR1106715
embryo_4-6h
 SRR1106716
embryo_4-6h
 SRR1106717
embryo_6-8h
 SRR1106726
embryo_14-16h
 SRR1106725
embryo_14-16h
 SRR060679
140x9_testes_total
 SRR060683
160_testes_total
 V047
embryo
 SRR060681
Argx9_testes_total
 M027
male body		 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR1106714
embryo_2-4h
 SRR060655
9x160_testes_total
 SRR060689
160x9_testes_total
 V116
male body		 SRR060666
160_males_carcasses_total
............................................................................TGGACTTGGAGAAGGAGATGGCGC................................................... 24 0 3 32.67 98 40 46 3 0 1 0 0 2 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCAACA............................................... 26 0 4 24.50 98 0 2 6 24 10 11 5 9 7 3 3 4 2 0 0 0 2 0 1 0 3 2 0 0 0 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGC..................................................... 22 0 3 20.33 61 24 24 3 0 0 0 1 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCAAC................................................ 25 0 4 15.50 62 4 2 9 5 3 6 0 2 7 7 3 7 2 0 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCG.................................................... 23 0 3 14.00 42 21 15 4 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCAACA............................................... 28 0 3 11.33 34 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 3 0 0 0 0 0 0 0 4 2 0 0 0 3 2 2 3 3 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGC................................................... 22 0 4 8.50 34 6 11 1 2 5 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 3 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGC..................................................... 20 0 4 7.50 30 6 6 1 1 0 3 1 0 0 0 0 1 4 0 0 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCAA................................................. 24 0 4 6.50 26 1 1 1 3 5 0 7 1 2 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGG...................................................... 21 0 3 5.33 16 10 2 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCA.................................................. 25 0 3 5.00 15 7 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCAAC................................................ 27 0 3 4.67 14 1 0 4 1 0 0 2 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCA.................................................. 23 0 4 3.75 15 2 1 0 3 1 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCAACAT.............................................. 27 0 3 3.33 10 0 0 0 1 2 1 1 0 0 3 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCAA................................................. 26 0 3 3.00 9 1 1 2 2 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGG...................................................... 19 0 4 3.00 12 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCG.................................................... 21 0 4 3.00 12 3 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ACAGATTGGGGTTCTGAAGCTGACGG....................................................................................................................... 26 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ACAGATTGGGGTTCTGAAGCTGACG........................................................................................................................ 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TGACAGATTGGGGTTCTGAAGCTGA.......................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCAACATC............................................. 30 0 3 1.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCCACGGGACCTGGAATTCCCAAAGCCAC......... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCAACATC............................................. 28 0 3 1.00 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCACAGAACTCCACGGGACCTGGAA...................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCCACGGGACCTGGAATTCCCAAAGCC........... 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACTTGGAGAAGGAGATGGCGC................................................... 21 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ACCGATTGGGGTTCTGAAGCTGACGG....................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACTTGGAGAAGGAGATGGCGCAACA............................................... 25 0 4 0.50 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCCACA............................................... 26 1 4 0.50 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGAAACA............................................... 28 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTTGAGAAGGAGATGGCGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGT..................................................... 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGCGATGGCGCA.................................................. 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGGGATGGCGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCAT................................................. 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCAAT................................................ 27 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGCGAAGGAGATGGC..................................................... 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCCA................................................. 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TTGGGGTTCTGAAGCTGACGGAGC.................................................................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........TTGGGGTTCTGAAGCTGACGGAGCGTCA................................................................................................................ 28 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGTG.................................................... 23 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................CGGACTTGGAGAAGGAGATGGCG.................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GGACTTGGAGAAGGAGATGGCGCAA................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTCGGAGAAGGAGATGGCG.................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................CTGGACTTGGAGAAGGAGATGGCGCA.................................................. 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGCGATGGCGCAACATC............................................. 28 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGA......................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCA.................................................... 23 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCGCT.................................................. 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGAAGGAGATGGCT.................................................... 23 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCCA................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGGACTTGGAGACGGAGATGGAGCAACA............................................... 28 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGTGATGGCGCAAC................................................ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TGGAGAAGGAGATGGCGCAACA............................................... 22 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTCGGAGAAGGAGATGGCGC................................................... 22 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCAAA................................................ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GGTTCTGAAGCTGACGGAGCG................................................................................................................... 21 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACTTGGAGAAGGAGATGGCG.................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TGGGGTTCTGAAGCTGACGGAGCG................................................................................................................... 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATGGCGCAG................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................GACTTCGAGAAGGAGATGGCGCAACA............................................... 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACTTGGAGAAGGAGATGGCGCA.................................................. 22 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATG....................................................... 18 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................TTGGAGAAGGAGAGGGCGCA.................................................. 20 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGATAGCGCAACA............................................... 26 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAAGGAGAGGGC..................................................... 20 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TGGGGTTCTGAAGCTGGCGGAGCGT.................................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GAATTGGAGAAGCAGATGGCGCAACA............................................... 26 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTGGAGAAGGAGATGGCGCA.................................................. 20 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACTTGGAGAAGGAGATGGCGCAAC................................................ 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGCGAAGGAGATGGCGCA.................................................. 23 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................ACGGGACCTGGAATTCCCAAAGCC........... 24 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAACGAGATGGCGCAAC................................................ 25 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGAATGAGATGGCGCAAC................................................ 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TACTTGGAGAAGGAGATGGCGCAA................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTGAAGCTGACGGAGCGTCAG............................................................................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GGCTTGGAGAAGGAGATGG...................................................... 19 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGGAGGAGACGGCG.................................................... 21 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................GACTTGGAGACGGAGATGGCGCAAC................................................ 25 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GTGGTTCGGAAGCTGGCGGAG..................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................GGTGGACTTGGTGAAGGA........................................................... 18 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TTGGGGTTCTGACGCTGACG........................................................................................................................ 20 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CACATGAACTGGAATTCCCA................ 20 3 16 0.13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................CGTCTGAAGGGCATCTGGT.......................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................GGAGAAGGAGATGGCGCAGGG............................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GGAATTGCCAAAGCCTCGA....... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................ATGACTGCCACCGCCAAGT.............................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCTTACTGTCTAACCCCAAGACTTCGACTGCCTCGCAGTCGTGACGGTGGCGGTGCAGGCAGCCTTCCAGTAGATCACCTGAACCTCTTCCTCTACCGCGTTGTAGTGTCTTGAGGTGCCCTGGACCTTAAGGGTTTCGGTGTTTCCTGAG
***********************************..............(((((..(((.((...(((((........)))))...)).)))..))))).................*********************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106724
embryo_12-14h
 SRR060676
9xArg_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR1106726
embryo_14-16h
 SRR1106725
embryo_14-16h
 SRR060677
Argx9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR1106723
embryo_12-14h
 SRR060675
140x9_ovaries_total
 GSM1528803
follicle cells		 SRR1106730
embryo_16-30h
 SRR1106727
larvae
 SRR060660
Argentina_ovaries_total
 SRR060673
9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR1106720
embryo_8-10h
 SRR1106729
mixed whole adult body
 SRR1106712
embryo_0-2h
 SRR1106716
embryo_4-6h
 SRR1106714
embryo_2-4h
 SRR1106728
larvae
 SRR1106722
embryo_10-12h
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 M061
embryo
 SRR060681
Argx9_testes_total
 SRR1106721
embryo_10-12h
 SRR1106718
embryo_6-8h
 M027
male body		 SRR1106713
embryo_0-2h
 SRR060689
160x9_testes_total
 V116
male body
..................................................................................................................GGTGCCCTCCACCTTAAG................... 18 2 4 18.50 74 0 0 10 0 0 14 11 0 0 9 0 0 8 3 0 0 0 0 0 0 0 4 3 3 3 2 2 1 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................GTTGTAGTGTCTTGAGGTGCCCTG............................ 24 0 1 5.00 5 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTAGTGTCTTGAGGTGCCCTG............................ 23 0 1 4.00 4 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CAGCCTTCCAGTAGATCACCTGAACCT................................................................. 27 0 1 3.00 3 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTAGTGTCTTGAGGTGCCCTG............................ 21 0 1 3.00 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTCCAGTAGATCACCTGAACCTCT............................................................... 24 0 4 2.50 10 3 2 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GGTGCCCTGCACCTTAAG................... 18 1 2 2.50 5 0 0 3 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CTTCCAGTAGATCACCTGAACCTCT............................................................... 25 0 3 2.33 7 2 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CGTTGTAGTGTCTTGAGGTGCCCTG............................ 25 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CCTTCCAGTAGATCACCTGAACCTCT............................................................... 26 0 3 2.00 6 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0
............................................................AGCCTTCCAGTAGATCACCTGAACCTCT............................................................... 28 0 3 1.67 5 0 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................CCAGTAGATCACCTGAACCTCT............................................................... 22 0 4 1.25 5 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................GCGTTGTAGTGTCTTGAGGTGCCCTG............................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................GCAGCCTTCCAGTAGATCACCTGAACCT................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CTAGTGTCTTGAGGTGCCCTG............................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CGTTGTAGTGTCTTGAGGTGCCC.............................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TATTGTAGTGTCTTGAGGTGCCCTG............................ 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTGTAGTGTCTTGAGGTGCCCTG............................ 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CGTTGTAGTGTCTTGAGGTGCCCT............................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GTTGTAGTGTCTTGAGGTGCCTG............................. 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GCCTTCCAGTAGATCACCTGAACCTCT............................................................... 27 0 3 1.00 3 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GGTGCCCTTCACCTTAAG................... 18 2 6 1.00 6 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................GGTGCCCTCCACCTTAAGG.................. 19 2 3 1.00 3 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CCCGTTGTAGTGTCTTGAGGTGCCCTG............................ 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTAGTGTCTTGAGGTGCCCTGGACCTT...................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTTGTAGTGTCTTGAGGTGCCCTG............................ 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTCCAGTAGATCACCTGAACCTCTT.............................................................. 25 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GGTGCCCTTGCCCTTAAG................... 18 2 5 0.60 3 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GGTGCCCCGCACCTTAAG................... 18 2 5 0.60 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................GCCTTCCAGTAGATCACCTGAACCT................................................................. 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TCCAGTAGATCACCTGAACCTCT............................................................... 23 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGTCCAGTAGATCACCTGAACCTCT............................................................... 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................CGGAGGCGGTGCAGGCAGG........................................................................................ 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................CCTCTACCGCGTTGTAGTGTC......................................... 21 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTCCAGTAGATCACCTGAACCTCT............................................................... 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GGTGCCCTCCCCCTTAAGG.................. 19 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGAGTGCCATGAGGTGCCC.............................. 19 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................GGTGCCCTCCACCTTAA.................... 17 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GGTGCCCTTTACCTTAAG................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CGTAGTGTCTGGAAGTGCC............................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TCGCAATCGTGAGGGTGG..................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................GAGCTGCCCTTGACCTAAA.................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GGGCTGTCCTGGACCTTA..................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TGAAGGTACCGGTGCAGGC........................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................GGTGCCCTGGTCCCT...................... 15 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12936:204896-205046 - dvi_303 AGAATGACAGATTGGGGTTCTGAAGCTGACGGAGCGTCAGCACTGCCACCGCCACGTCCGTCGGAAGGTCATCTAGTGGACTTGGAGAAGGAGATGGCGCAACATCACAGAACTCCACGGGACCTGGAATTCCCAAAGCCACAAAGGACTC
dp5 Unknown_group_637:5927-5969 + AC---GACAGCTGGAATGTGCCAGGCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CTC
droTak1 scf7180000415471:26682-26687 - GG--------------------------------------------A-----------------------------------------------------------------------------------------------------CTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGAATGACAGATTGGGGTTCTGAAGCTGACGGAGCGTCAGCACTGCCACCGCCACGTCCGTCGGAAGGTCATCTAGTGGACTTGGAGAAGGAGATGGCGCAACATCACAGAACTCCACGGGACCTGGAATTCCCAAAGCCACAAAGGACTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................TGGACTTGGAGAAGGAGATGGCGC...................................................24332.679800000000400461100000000000020000000001310000000010000002000000000
..............................................................................GACTTGGAGAAGGAGATGGCGCAACA...............................................26424.5098001122020002010000000000025924300004233671000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGC.....................................................22320.336100000000242240000000000000130201010000300000000000000000000000000
..............................................................................GACTTGGAGAAGGAGATGGCGCAAC................................................25415.5062006100204020300000000001025300007027970000000000000000000000001
............................................................................TGGACTTGGAGAAGGAGATGGCG....................................................23314.004200000000210150000000000000100100000000400000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCAACA...............................................28311.3334000000000000000000000000000000000000000034122350602000300300000
..............................................................................GACTTGGAGAAGGAGATGGCGC...................................................2248.50340001100061112530000000000002100000000100000000000000000000000000
..............................................................................GACTTGGAGAAGGAGATGGC.....................................................2047.5030003010406160000000001001101000001010101000000000000000000001000
..............................................................................GACTTGGAGAAGGAGATGGCGCAA.................................................2446.5026000000001010500000001000713200002000120000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGG......................................................2135.33160000000010020000000000000110110000000000000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCA..................................................2535.0015000000007010000000000000111000000011100000000000001000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCAAC................................................2734.6714000000001000000000000000201000000000400001000010101000000200000
..............................................................................GACTTGGAGAAGGAGATGGCGCA..................................................2343.7515001000102011110000001000013000000000020000000000000000000000000
..............................................................................GACTTGGAGAAGGAGATGGCGCAACAT..............................................2733.3310001000000001200000000000101000000003001000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCAA.................................................2633.009000000001010000000000000012000001000200000000000000000000100000
..............................................................................GACTTGGAGAAGGAGATGG......................................................1943.0012001001101000130000000002101000000000000000000000000000000000000
..............................................................................GACTTGGAGAAGGAGATGGCG....................................................2143.0012000000003031200000001001000000000000100000000000000000000000000
......ACAGATTGGGGTTCTGAAGCTGACGG.......................................................................................................................2612.002000000000000100000000000000000000000100000000000000000000000000
......ACAGATTGGGGTTCTGAAGCTGACG........................................................................................................................2512.002000010000000000000000000000000000000001000000000000000000000000
....TGACAGATTGGGGTTCTGAAGCTGA..........................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCAACATC.............................................3031.003000000000000000000000000000000000000000000010000100000000100000
.................................................................................................................TCCACGGGACCTGGAATTCCCAAAGCCAC.........2911.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................GACTTGGAGAAGGAGATGGCGCAACATC.............................................2831.003000100000001000000000000001000000000000000000000000000000000000
........................................................................................................TCACAGAACTCCACGGGACCTGGAA......................2511.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................TCCACGGGACCTGGAATTCCCAAAGCC...........2720.501001000000000000000000000000000000000000000000000000000000000000
...............................................................................ACTTGGAGAAGGAGATGGCGC...................................................2140.502000000000020000000000000000000000000000000000000000000000000000
...............................................................................ACTTGGAGAAGGAGATGGCGCAACA...............................................2540.502000000000000000000000000100000000000100000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGT.....................................................2230.331000000000010000000000000000000000000000000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCAT.................................................2630.331000000000010000000000000000000000000000000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCAAT................................................2730.331000000000000000000000000000000000000010000000000000000000000000
...........TTGGGGTTCTGAAGCTGACGGAGC....................................................................................................................2430.331100000000000000000000000000000000000000000000000000000000000000
...........TTGGGGTTCTGAAGCTGACGGAGCGTCA................................................................................................................2830.331000000000000000000000000000000100000000000000000000000000000000
.............................................................................GGACTTGGAGAAGGAGATGGCGCAA.................................................2530.331000000000010000000000000000000000000000000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGA.........................................................1830.331000000001000000000000000000000000000000000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCA....................................................2330.331000000000010000000000000000000000000000000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCGCT..................................................2530.331000000000000000000000000000000000000100000000000000000000000000
............................................................................TGGACTTGGAGAAGGAGATGGCT....................................................2330.331000000000000000000000000001000000000000000000000000000000000000
..................................................................................TGGAGAAGGAGATGGCGCAACA...............................................2240.251000000000000000000000000000000000000100000000000000000000000000
..............................................................................GACTTGGAGAAGGAGATGGCGCAAA................................................2540.251000000000000000000000000001000000000000000000000000000000000000
...............GGTTCTGAAGCTGACGGAGCG...................................................................................................................2140.251000010000000000000000000000000000000000000000000000000000000000
...............................................................................ACTTGGAGAAGGAGATGGCG....................................................2040.251000000001000000000000000000000000000000000000000000000000000000
............TGGGGTTCTGAAGCTGACGGAGCG...................................................................................................................2440.251000000000000000000000000000001000000000000000000000000000000000
..............................................................................GACTTGGAGAAGGAGATGGCGCAG.................................................2440.251000000000000000000000000000000000000000000000000000000000000010
...............................................................................ACTTGGAGAAGGAGATGGCGCA..................................................2240.251001000000000000000000000000000000000000000000000000000000000000
..............................................................................GACTTGGAGAAGGAGATG.......................................................1840.251000000000000000000000000000000000000000100000000000000000000000
.................................................................................TTGGAGAAGGAGATGGCGCA..................................................2040.251000000000000000000000000000000000000000000000000000000000000001
...............................................................................ACTTGGAGAAGGAGATGGCGCAAC................................................2440.251000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................ACGGGACCTGGAATTCCCAAAGCC...........2440.251001000000000000000000000000000000000000000000000000000000000000
...................CTGAAGCTGACGGAGCGTCAG...............................................................................................................2150.201000000000010000000000000000000000000000000000000000000000000000
...................................................................................GGAGAAGGAGATGGCGCAGGG...............................................21200.051000100000000000000000000000000000000000000000000000000000000000
dp5
AC---GACAGCTGGAATGTGCCAGGCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CTC22429.75119011520200000
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CT.21423.759509040100000
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------C..2049.503803800000000
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------...1943.251301300000000
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------A..2042.0080800000000
.........................CCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CT.2041.7570700000000
........................GCCAATCGAACG----CACTGC.........................................................................................................1841.5060600000000
.........................CCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CTC2141.5060600000000
.......................GGCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CT.2241.0040400000000
AC---GACAGCTGGAATGTGCC.................................................................................................................................1911.0010100000000
.........................CCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------C..1941.0040400000000
.......CAGCTGGAATGTGCCAGGCCA...........................................................................................................................2111.0010100000000
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CC.2141.0040040000000
..........................CAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CT.1950.4020200000000
..................TGCCAGGCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------C..2630.3310100000000
..................TGCCAGGCCAATCGAACG----CACT...........................................................................................................2230.3310100000000
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------T..2040.2510100000000
........................GCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------AA.2140.2510100000000
.........................CCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CTT2140.2510100000000
.......................GGCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------C..2140.2510100000000
.......................GGCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CTT2340.2510100000000
.......................GGCCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------...2040.2510100000000
.........................CCAATCGAACG----CACTGCC-----------------------------------------------------------------------------------------------------CA.2050.2010100000000
........................GCCAATCGAACG----CACTGCA-----------------------------------------------------------------------------------------------------A..2050.2010100000000
droTak1
GG--------------------------------------------A-----------------------------------------------------------------------------------------------------CTCSizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 04:47 PM