ID:

dvi_267

 Coordinate:

scaffold_13049:24869571-24869661 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.4 -24.3 -24.3 -24.2

Flybase annnotation

intron [Dvir\GJ11221-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1_DVirRCHelitron+
mature
  1. scaffold_12967:415420-415442 +
  2. scaffold_13049:24816047-24816069 +
  3. scaffold_13049:24832090-24832112 -
  4. dvi_267  scaffold_13049:24869571-24869593 -
  5. scaffold_13049:24927003-24927025 -
star
  1. scaffold_12967:415384-415406 +
  2. dvi_267  scaffold_13049:24869607-24869629 -

Sense Strand Reads

CACATTTGGATTTTGCACAAATACAATATACTCTTATACCCATTTTTAATGGGTTCAGGGTATAAAAAGTGAAGGCGCAGCTTCAGCGACTTACGGCAGAGGTGGCAAAGCTAACCGCTACACATGCGCCGCAGATGCCACAGGCTCCACAGCCACAGGAGTCGCAGCAAATGCCACAGCCGCATCAGCAG
*******************************************************************.((...(((........(((.......((((...(((((..........((.......)))))))...))))....))).....)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 SRR060678
9x140_testes_total
 M047
female body
 SRR060670
9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060675
140x9_ovaries_total
 SRR060683
160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060674
9x140_ovaries_total
 SRR060688
160_ovaries_total
 V047
embryo
 SRR060685
9xArg_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 V116
male body		 SRR060673
9_ovaries_total
 M061
embryo
 SRR060654
160x9_ovaries_total
 GSM1528803
follicle cells		 SRR060663
160_0-2h_embryos_total
......................................................................................................................TACACATGCGCCGCAGATGCCAC.................................................. 23 0 5 6.20 31 4 4 7 5 3 5 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAGGC.............................................. 27 0 5 5.60 28 0 1 1 15 0 1 0 0 0 0 1 0 1 0 1 1 1 2 1 0 0 2 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCA................................................... 23 0 5 5.60 28 8 12 0 1 0 0 3 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCAC.................................................. 24 0 5 5.00 25 6 8 1 1 0 2 1 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAGG............................................... 26 0 5 4.00 20 0 0 1 9 1 1 1 0 0 0 1 2 0 0 1 0 0 1 0 1 1 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCACA................................................. 25 0 5 3.80 19 2 1 1 0 0 0 4 0 3 0 1 3 2 0 0 0 0 0 0 0 1 0 1 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGC..................................................... 21 0 5 3.00 15 4 3 0 0 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAG................................................ 25 0 5 2.60 13 1 2 3 5 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCA................................................... 22 0 5 2.60 13 3 0 5 2 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATG...................................................... 20 0 5 2.40 12 6 3 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCC.................................................... 21 0 5 2.40 12 0 2 1 2 2 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1
......................................................................................................................TACACATGCGCCGCAGATGC..................................................... 20 0 5 2.40 12 1 1 4 2 1 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCACAG................................................ 26 0 5 2.40 12 5 4 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCC.................................................... 22 0 5 2.20 11 4 0 0 1 0 0 3 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATG...................................................... 19 0 5 1.80 9 0 2 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACA................................................. 24 0 5 1.80 9 0 1 0 5 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0
..................................................................................TCAGCGACTTACGGCAGAGGTGG...................................................................................... 23 0 2 1.50 3 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TCAGCGACTTACGGCAGAGGTGGC..................................................................................... 24 0 2 1.50 3 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCTACACATGCGCCGCAGATG...................................................... 21 0 4 1.25 5 0 0 1 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGGTTCAGGGTATAAAAAGTGAAGGC................................................................................................................... 26 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGGAGTCGCAGCAAATGCCACAG............ 23 0 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGACTTACGGCAGAGG......................................................................................... 21 0 2 1.00 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TCCACAGCCACAGGAGTCGCA......................... 21 0 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGACTTACGGCAGAGGTGG...................................................................................... 24 0 2 1.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGACTTACGGCAGAGGTGGCAA................................................................................... 27 0 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAGGCTC............................................ 29 0 5 0.80 4 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCACAGGC.............................................. 28 0 5 0.80 4 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCACAGG............................................... 27 0 5 0.80 4 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAATACAA..................................................................................................................................................................... 26 0 20 0.75 15 0 0 0 0 4 0 1 0 3 0 0 3 0 2 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................GCTACACATGCGCCGCAGATGCCAC.................................................. 25 0 4 0.75 3 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAACCGCTACACATGCGCCGCAGATG...................................................... 26 0 4 0.75 3 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCAT.................................................. 23 1 5 0.60 3 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGACTTACGGCAGAGGTGGCA.................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CAGGAGTCGCAGCAAATGCCAC.............. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TCAGCGACTTACGGCAGAGGTGGCAA................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCTACACATGCGCCGCAGAT....................................................... 20 0 4 0.50 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGACTTACGGCAGAGGTGGC..................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATAAAAAGTGAAGGCGCAGCTTCAGC........................................................................................................ 27 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TCCACAGCCACAGGAGTCGCAGCAA..................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGGAGTCGCAGCAAATGCCAC.............. 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TCCACAGCCACAGGAGTCGCT......................... 21 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGGAGTCGCAGCAAATGCCC............... 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................TCAGCGACTTACGGCAGAGGTG....................................................................................... 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................ACAGCGACTTACGGCAGAGGTGG...................................................................................... 23 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGACTTACGGCAGAGGT........................................................................................ 22 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GAAGGCGTAGCGTAAGCGACT.................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................GCTACACATGCGCCGCAGATGCCA................................................... 24 0 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCC................................................... 23 1 5 0.40 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAAT......................................................................................................................................................................... 22 0 20 0.40 8 0 0 7 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCC................................................... 22 1 5 0.40 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACACATGCGCCGCAGATGCCACAGGC.............................................. 26 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAATA........................................................................................................................................................................ 23 0 20 0.35 7 1 1 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAATACA...................................................................................................................................................................... 25 0 20 0.35 7 0 1 5 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGAATTACGGCAGAGGTG....................................................................................... 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TCAGGGTATAAAAAGTGAAGGCGCAGC.............................................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CAGTAGTCGCAGCAAATGCCAC.............. 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TACGGCAGAGGTGGCAAAGCTAACC........................................................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TACGGCAGAGGTGGCAAAGCTA.............................................................................. 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGCGAATTACGGCAGAGG......................................................................................... 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................AGCTTCAGCGAATTACGGCAGA........................................................................................... 22 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGGCAAAGCTAACCGCTACACATGCGCC............................................................. 28 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AAGCTAACCGCTACACATGCGCC............................................................. 23 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AGCTAACCGCTACACATGCGC.............................................................. 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCTACACATGCGCCGCAGATGCCACC................................................. 26 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAACCGCTACACATGCGCCGCAGAT....................................................... 25 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TACCCATTTTTAATGGGTTCAGGGT.................................................................................................................................. 25 0 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0
CACATTTGGATTTTGCACAA........................................................................................................................................................................... 20 0 20 0.25 5 1 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCTAACCGCTACACATGCGCCGCAGA........................................................ 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAATACAAT.................................................................................................................................................................... 27 0 20 0.25 5 0 0 3 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTACGGCAGAGGTGGCAAAGC................................................................................ 21 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAA................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGTCGCAGATGCCACAGGC.............................................. 27 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGCACATGCGCCGCAGATGCCAC.................................................. 23 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATTTTA................................................... 22 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACC................................................. 24 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACACATGCGCCGCAGATGCCACAGGCT............................................. 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAGGCT............................................. 28 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAGGCTA............................................ 29 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAGT............................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATACACATGCGCCGCAGATGCCA................................................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGCTGCCAC.................................................. 23 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................ATCCTACACATGCGCCGCAGATGCCAC.................................................. 27 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCT................................................... 23 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ACATGCGCCGCAGATGCCACA................................................. 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCACAGGCC............................................. 29 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCGGATGCCACAGG............................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAATACAATA................................................................................................................................................................... 28 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATACACATGCGCCGCAGATGC..................................................... 21 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CATGCGCCGCAGATGCCACAGG............................................... 22 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACACATGCGCCGCAGATGCCACAGG............................................... 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTACACATGCGCCGCAGATGCCAA.................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACAGGCTT............................................ 29 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AACACATGCGCCGCAGATGCCACAGGC.............................................. 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACACATGCGCCGCAGATGCCACT................................................. 24 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................AATGGGTTCAGGGTATAAAAAGTGAA...................................................................................................................... 26 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTGCACATGCGCCGCAGCTGCCC................................................... 23 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................TTAATGGGTTCAGGGTATAAAAAGTGA....................................................................................................................... 27 0 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAATAC....................................................................................................................................................................... 24 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................TTAATGGGTTCAGGGTATAAAAAGTG........................................................................................................................ 26 0 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAACTACA...................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TACTCTTATACCCATTTTTAATGGGTT........................................................................................................................................ 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAA.......................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TACTCTTATACCCATTTTTAATGG........................................................................................................................................... 24 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CCATTTTTAATGGGTTCAGGGTC................................................................................................................................. 23 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACAAATACAAAA................................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACACATACA...................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACATTTGGATTTTGCACACATACAA..................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................AATGGGTTTAGGGTATAAAAAGTCAA...................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GTGTAAACCTAAAACGTGTTTATGTTATATGAGAATATGGGTAAAAATTACCCAAGTCCCATATTTTTCACTTCCGCGTCGAAGTCGCTGAATGCCGTCTCCACCGTTTCGATTGGCGATGTGTACGCGGCGTCTACGGTGTCCGAGGTGTCGGTGTCCTCAGCGTCGTTTACGGTGTCGGCGTAGTCGTC
***********************************.((...(((........(((.......((((...(((((..........((.......)))))))...))))....))).....)))))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060681
Argx9_testes_total
 SRR060679
140x9_testes_total
 M047
female body
 SRR060678
9x140_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060677
Argx9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060675
140x9_ovaries_total
 SRR060683
160_testes_total
 SRR060655
9x160_testes_total
 SRR060659
Argentina_testes_total
 SRR060673
9_ovaries_total
 SRR060658
140_ovaries_total
 SRR060689
160x9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 GSM1528803
follicle cells		 SRR060688
160_ovaries_total
 SRR060674
9x140_ovaries_total
 M061
embryo
 SRR060660
Argentina_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060657
140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 M028
head
 SRR060663
160_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 V053
head
......................................................................................................ACCGTTTCGATTGGCGATGTGTACG................................................................ 25 0 5 14.60 73 18 23 3 2 3 0 6 0 1 9 0 1 1 1 0 0 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ACCGTTTCGATTGGCGATGTGTACGC............................................................... 26 0 4 10.00 40 4 0 8 13 0 2 0 2 2 0 1 2 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................CACCGTTTCGATTGGCGATGTGTACG................................................................ 26 0 3 8.67 26 11 8 2 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GTTTCGATTGGCGATGTGTACGC............................................................... 23 0 4 8.00 32 6 1 5 1 1 1 1 4 1 0 1 0 0 0 0 3 0 0 0 3 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0
........................................................................................................CGTTTCGATTGGCGATGTGTACG................................................................ 23 0 5 7.80 39 10 11 0 2 0 0 2 0 1 4 3 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTATATGAGAATATGGGTAAAAATT.............................................................................................................................................. 25 0 20 6.15 123 3 9 1 20 17 0 0 4 4 12 0 3 0 0 42 3 1 0 0 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0
.........................TATATGAGAATATGGGTAAAAATT.............................................................................................................................................. 24 0 20 5.70 114 6 13 2 0 48 0 10 0 2 0 0 0 2 0 0 1 1 0 0 0 13 0 0 4 2 0 0 0 4 4 2 0 0 0 0
......................TGTTATATGAGAATATGGGTAAAAATT.............................................................................................................................................. 27 0 20 5.60 112 0 19 0 23 38 0 0 0 11 7 0 1 0 0 0 1 1 0 0 0 5 0 0 0 1 0 0 0 4 0 1 0 0 0 0
.....................................................................................................CACCGTTTCGATTGGCGATGTGTAC................................................................. 25 0 3 5.33 16 3 2 1 5 0 0 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCGTTTCGATTGGCGATGTGTACGC............................................................... 25 0 4 5.25 21 2 0 9 3 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................ACCGTTTCGATTGGCGATGTGTAC................................................................. 24 0 5 3.40 17 2 0 1 5 0 1 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................TTTCGATTGGCGATGTGTACGC............................................................... 22 0 4 2.50 10 5 0 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CGTTTCGATTGGCGATGTGTACGC............................................................... 24 0 4 2.50 10 2 0 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GTTTCGATTGGCGATGTGTACG................................................................ 22 0 5 2.40 12 2 4 0 1 0 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATGTTATATGAGAATATGGGTAAAAATT.............................................................................................................................................. 28 0 20 2.10 42 0 6 0 13 8 0 2 3 0 0 0 0 0 0 5 0 0 0 0 0 3 0 0 0 0 0 0 0 2 0 0 0 0 0 0
............................................................................CGTCGAAGTCGCTGAATGCCGTCT........................................................................................... 24 0 3 2.00 6 3 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TCCGCGTCGAAGTCGCTGAATGCCG.............................................................................................. 25 0 2 2.00 4 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CCACCGTTTCGATTGGCGATGTGTAC................................................................. 26 0 3 1.67 5 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................CCACCGTTTCGATTGGCGATGTGTACGC............................................................... 28 0 2 1.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TCCGCGTCGAAGTCGCTGAATGCCGT............................................................................................. 26 0 2 1.50 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAGAGGTGTCGGTGTCCTCAGCGTCGTTT.................... 29 2 2 1.50 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGCGTTGAAGTCGCTGAATGCCGTCT........................................................................................... 26 1 3 1.33 4 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTCCGCGTCGAAGTCGCTTAATGC................................................................................................ 24 1 3 1.33 4 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GTTATATGAGAATATGGGTAAAAATT.............................................................................................................................................. 26 0 20 1.20 24 3 0 0 0 10 0 1 4 4 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCCGTTTCGATTGGCGATGTGTACGC............................................................... 26 1 4 1.00 4 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TCACTTCCGCGTCGAAGTCGCTGAA................................................................................................... 25 0 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CCGCGTCGAAGTCGCTGAATGCCGT............................................................................................. 25 0 2 1.00 2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGCGTCGAAGTCGCTGAATGCCGTCT........................................................................................... 26 0 3 1.00 3 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GTCGAAGTCGCTGAATGCCGTCT........................................................................................... 23 0 3 1.00 3 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CACCGTTTCGATTGGCGATGTGTACGC............................................................... 27 0 2 1.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TCCGCGTCGAAGTCGCTTAATGC................................................................................................ 23 1 3 1.00 3 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCGTTTCGATTGGCGATGTGTACG................................................................ 24 0 5 0.80 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTCGATTGGCGATGTGTACG................................................................ 21 0 5 0.80 4 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCCGTTTCGATTGGCGATTTGTACGC............................................................... 26 2 4 0.75 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGCGTCGAAGTCGCTGAATGCCGT............................................................................................. 24 0 3 0.67 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................CGTCGAAGTCGCTGAATGCCGT............................................................................................. 22 0 3 0.67 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTTCCGCGTCGAAGTCGCTTAATGCCG.............................................................................................. 27 1 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TGCCGTCTCCATCGTTCAGAT.............................................................................. 21 3 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCGTTTCGATTGGCGATGTGTAC................................................................. 23 0 5 0.60 3 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCCGTTTCGATTGGCGATGTGTACG................................................................ 25 1 5 0.60 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GGTGTCCTCAGCGTCGTTTACGGT............... 24 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CCGAGGTGTCGGTGTCCTCAGCG.......................... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TCCGAGGTGTCGGTGTCCTCAGCGT......................... 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CTTTTCGATTGGCGATGTGTACGC............................................................... 24 1 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TCCGCGTCGAAGTCGCTGAATG................................................................................................. 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CTCAGCGTCGTTTACGGTGTCGGCG........ 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CCGAGGGGTCGGTGTCCTCAGCGT......................... 24 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CCCATATTTTTCACTTCCGCGTCGAA............................................................................................................ 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CCCACCGTTTCGATTGGCGATGTGTACGC............................................................... 29 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTTCGATTGGCGATGTGTACGC............................................................... 23 1 4 0.50 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................CTTCCGCGTCGAAGTCGCTGAATGCC............................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CCGCGTCGAAGTCGCTGAATGCC............................................................................................... 23 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................GCCGCGTCGAAGTCGCTGAATGCCGT............................................................................................. 26 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................CGTCGAAGTCGCTTAATGCCGTCT........................................................................................... 24 1 4 0.50 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TCACTTCCGCGTCGAAGTCGCTGAAT.................................................................................................. 26 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TCGAAGTCGCTGAATGCCGTCTCC......................................................................................... 24 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CCCCCGTTTCGATTGGCGATGTGTACGC............................................................... 28 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CCGAGGTGTCGGTGTCCTCAGCGT......................... 24 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTGTCCGAGGTGTCGGTGTCCTCAGCG.......................... 27 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTCACCGTTTCGATTGGCGATGTGTACGC............................................................... 29 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CCGCGTCGAAGTCGCTGAATGCCGTCT........................................................................................... 27 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGTCCGAGGTGTCGGTGTCCTCAGC........................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCGATTGGCGATGTGTACGC............................................................... 21 0 4 0.50 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ACCTTTTCGATTGGCGATGTGTACGC............................................................... 26 1 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CTTTTCGATTGGCGATGTGTACG................................................................ 23 1 5 0.40 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CGATTGGCGATGTGTACG................................................................ 18 0 5 0.40 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GTCGAAGTCGCTGAATGCCGT............................................................................................. 21 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGCGTCGAAGTCGCTGAATGCCG.............................................................................................. 23 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................CACTTCCGCGTTGAAGTCGCTTAAT.................................................................................................. 25 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................CGTCGAAGTCGCTGAATGCCGTC............................................................................................ 23 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GTCCCATATTTTTCACTTCCGCGT................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCCACCGTTTCGATTGGCGATGTGTACG................................................................ 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CCACCGTTTCGATTGGCGATGTGTA.................................................................. 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCTCCACCGTTTCGATTGGCGATGTG.................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCTCCACCGTTTCGATTGGCGATGTGT................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GCGTTGAAGTCGCTGAATGCCGT............................................................................................. 23 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CACCGTTTCGATTGGCGATGTGT................................................................... 23 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CAAGTCCCATATTTTTCACTTCCGCGT................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TCACTTCCGCGTCGAAGTCGCTTAATGC................................................................................................ 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CCACCGTTTCGATTGGCGATGTGTACG................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTTCCGCGTCGAAGTCGCTTAATGC................................................................................................ 25 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CGTCTCCACCGTTTCGATTGGCGATGT..................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCCGTCTCCACCGTTTCGATTGGCGATG...................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAATGCCGTCTCCACCGTTT.................................................................................. 20 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................ACTTCCGCGTCGAAGTCGCTTAATGC................................................................................................ 26 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCTCCACCGTTTCGATTGGCGATGT..................................................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCTCCACCGTTTCGATTGGCGATG...................................................................... 24 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GCGTCGAAGTCGCTGAATGCCGTC............................................................................................ 24 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGCGTCGAAGTCGCTGAATGCCGTC............................................................................................ 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TTATGTTATATGAGAATATGGGTA.................................................................................................................................................... 24 0 20 0.25 5 0 2 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TACCGTTTCGATTGGCGATGTGTACGC............................................................... 27 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGCGTCGAAGTCGCTGAAAGCCGTCT........................................................................................... 26 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATGTTATATGAGAATATGGGTAAAAAT............................................................................................................................................... 27 0 20 0.25 5 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCGTTTCGATTGACGATGTGTACGC............................................................... 25 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ACGGTGTCCGAGGTGTCGGTG................................... 21 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................ACACCGTTTCGATTGGCGATGTGTAC................................................................. 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ACACCGTTTCGATTGGCGATGTGTACG................................................................ 27 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCGTTTCGATTGGCGATGTGTTCGC............................................................... 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCCCTTTCGATTGGCGATGTGTACGC............................................................... 26 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCGTTTCGATTGGCGACGTGTACGC............................................................... 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ACCGTTTCGCTTGGCGATGTGTACGC............................................................... 26 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGCGTCGAAGTCGCTTAATGCCGTCT........................................................................................... 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGTTATATGAGAATATGGGTAAAAAT............................................................................................................................................... 26 0 20 0.25 5 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................GCGATGTGTACGCGGCGTCTACGGT................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCTCTTCGATTGGCGATGTGTACGC............................................................... 25 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CTCCACCGTTTCGATTGGAGATGTGTAC................................................................. 28 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TCCGTTTCGATTGGCGATGTGTACGC............................................................... 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTTTTCGATTGGCGATGTGTACGC............................................................... 24 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................AATTGGCGATGTGTACGC............................................................... 18 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................ATATGAGAATATGGGTAAAAATT.............................................................................................................................................. 23 0 20 0.20 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GTGTACGCGGCGTCTACGGTGTCCGA............................................. 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTACGCGGCGTCTACGGTGTCCG.............................................. 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTTTTTCGATTGGCGATGTGTACG................................................................ 24 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ACCGCTTCGATTGGCGATGTGTACG................................................................ 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCGTTTCGATTGGCGATGTGTACA................................................................ 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CTGTTTATGTTATATGAGAATATGGGT..................................................................................................................................................... 27 1 20 0.20 4 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................CCGAAGTCGCTGAAT.................................................................................................. 15 1 10 0.20 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0
....................................................................................................TTTCCGTTTCGATTGGCGATGTGTACG................................................................ 27 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ACCTTTTCGATTGGCGATGTGTAC................................................................. 24 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CGTTTCGATTGGCGATGTGTCC................................................................. 22 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................CCCGTTTCGATTGGCGATTTGTACGA............................................................... 26 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ACCGTTTAGATTGGCGATGTGTACG................................................................ 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCCGTTTCGATTGGCGATGTGTACT................................................................ 25 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGTACGCGGCGTCTACGGTGTCCGA............................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCCGTTTCGATTGGCGATGTGTAC................................................................. 24 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AACGTGTACGCGGCGTCTACGGTGTC................................................ 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCTGTTTCGATTGGCGATGTGTAC................................................................. 24 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGCGGCGTCTACGGTGTCCGA............................................. 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTTCGATTGGCGATGTGTACG................................................................ 22 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTGTGTACGCGGCGTCTACGG.................................................... 21 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ACCTTTTCGATTGGCGATGTGTACG................................................................ 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCGATTGGCGATGTGTACG................................................................ 23 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GTCTACGGTGTCCGAGGTGTCGGT.................................... 24 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GTCTACGGTGTCCGAGGTGTCG...................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AGAATATGGGTAAAAATT.............................................................................................................................................. 18 0 20 0.15 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CGTCTACTGTGTCCGAGTT.......................................... 19 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................TATGAGAATATGGGTAAAAATT.............................................................................................................................................. 22 0 20 0.10 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TATGTTATATGAGAATATGGGTAAAA................................................................................................................................................. 26 0 20 0.10 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GTTTATGTTATATGAGAATATGGGT..................................................................................................................................................... 25 0 20 0.10 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TATATGAGAATATGGGTAAAAATTA............................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................ATGAGAATATGGGTAAAAATT.............................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTATATGAGAATATGGGTA.................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATGTTATATGAGAATATGGGT..................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................TATATGAGTATATGGGTAAAAATT.............................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................ATGAGAATATGGGTAAAAAT............................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGTTATATGAGAATATGGGTAGAAATT.............................................................................................................................................. 27 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TATATGAGAATATGGGTAAAAATTAC............................................................................................................................................ 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TATGTTATATGAGAATATGGGTA.................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TATATGAGAATATGGGTAAAAACT.............................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AAACCTAAAAGGTGTTTATGTTATATGA............................................................................................................................................................... 28 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTATACGAGAATATGGGTAAAAATT.............................................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................TGAGAATATGGGTAAAAATT.............................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTATATGAGAATATGGGT..................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGTTATATGAGAATATGGGTAAAAA................................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................TATGTTATATGAGAATATGGGTAAAAA................................................................................................................................................ 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TTATGTTATATGAGAATA.......................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GTGTTTATGTTATATGAGAAT........................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GTTATATGAGAATATGGGTAAAAAT............................................................................................................................................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CATGAGAATATGGGTAAAAATT.............................................................................................................................................. 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TATATCAGAATATGGGTAAAAATT.............................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TTATGTTATATGAGAATATGGGT..................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GTTATATGAGAATATGGGTAAAAATTC............................................................................................................................................. 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GAGAATATGGGTAAAAATTACCCAAGTC..................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TGTTTATGTTATATGAGAATATGGGT..................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATGTTATATGAGAATATG........................................................................................................................................................ 18 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TGTATGAGAATATGGGTAAAAATT.............................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTATATGAGAGTATGGGTAAAAATT.............................................................................................................................................. 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GTGTTTATGTTATATGAGAATATG........................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GTTTATGTTATATGAGAAT........................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:24869521-24869711 - dvi_267 CACATTTGGATTTTGCA--C----------------AAATACAATATACTCTT-ATACCC---A-TTTTTAATGGGTTCAGGGTATAAAAAGT----------------------------------------------------------------------------GAAGGCGCAGCTTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCAAAGCTA------ACCG----------------CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCTCCAC------------------------AGCCAC-------------------------------------------------------A--------------------------------------------GGAGTCGCAGCAAAT---GC--CACAGCCGC----ATCAGCAG
droMoj3 scaffold_6540:3386428-3386594 + TACTTT-------TTCA--C----------------AAAACCATTATACCCTG-ATTTCC--CA-TTTTCAATGGGTTCAGGGTATAAAAATT-C-------------------------------------AACAGATTTTAGCAGAAGCAACCC---------------------------------------------------GA-----------A------------------ATTTCAGC-----------A-----------------------------CAA---TAAACT------TCAT-------------------------------------------------G----------------------------------------------------------------------------------------TTT------------------------------------------------------------------------TGTT----------------GGCAACAGCCACAAC-------------------------------------------------------AGC---AACA-----------------------------------------------------TCAATT-------GACAGCAGC----AACAGCAG
droGri2 scaffold_14853:5209324-5209510 - CCTATC-------TGTGCAC----------------AGCATCGTTATACCCTT-TTAAAA--CA-TTTTTAATG-------GGTTCAGTTTGG-------------GACA------------TAAAA------AAA-----------------------------------AGCTGCA------AAACGA-------GCGTAAAA-----------------------------------------------------CGCGAGCGAAACGCGCGCGTTT--AAT----GA---TA------------------------ACCGTCGCATACG--------------------------------------------------GG------ACAA----C------------A-----------------------------------------------------------------------------------------------------------------------ACAAC------AACAACAGCAACAAC-------------------------------------------------------AAC---AA-----------------------------------------------------------CG---AC--AACAGCAAC----AACAACA-
droWil2 scf2_1100000002869:4496-4672 + TACATT-------TTGG--C----------------GACTTTAATATACCATT-TCACCC--TA-TGGGTGTAT-------GGTATAAAAAAA----------------------------------------------------------------------------CAATCCATTTCCAA--AATGACTAAAGA-----CAACTGGGTTAAAGCCGCAG----------------TCCTTCAGC-----------AGGGTGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGACAGCATC---CACC-----------------------------------------------------TCAAGT-----------GCATC----AACCGCA-
dp5 Unknown_group_38:17809-17982 - CACTTCCACTTTTACCA--C----------------AAACCTAATATACCCAA-ATACTCCTTT-TGAGTACCG-------GGTATAAAAATG-C-------------------------------------A--------------------------------------GC-AT------CGG--CAAGC--------------TGAATGTTAGATGGAA----------------TACTCCAAT-------------------------------------------------------------------------------------------------------------------------------------------------CGG----------------ATACATTTACTTC-------------------GTAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAACCGAG---------TCGAAAGC----TGCATCAG
droPer2 scaffold_377:1068-1248 + CACATCCACTTTTACCA--C----------------AAATCTAATATACCCCA-ATACTCATTT-TGAGTATCG-------GGTATAAAAACA----------------------------------------------------------------------------GACGCC-----T---GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCTGGC---CCACGCACTGGGCGACGACGTCC------AGAG----------------CAGCCATTGAGCCGTT------------------------------------------------------------------------------------------------CCC--AGGCACAAC------------------------A---ACAG----------------------CAGCAGC------------------T--------------------------------------------------ACA------GCAGCT---GC--AACAGCAGC----CTCAGCGC
droAna3 scaffold_13082:2622265-2622426 - CACTTT-------TGAC--C----------------AAAATTATAATACCCTCT----------GCA------------AGGGTATAAAAACATC----------------------------------------------------------------------------AGCATCA------G----------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATCAGTCACAGCAACAGTGAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--CAAAGCAAC----AGCAACAG
droBip1 scf7180000394106:2490-2690 - CACTTT-------TGGACACTCCTTCACTTTTGGACAAAATTATAATACCCTCC----------GCA------------AGGGTATAACAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACATCCGG--------------------------------------------------AGCAGCAA-CGG---------C------------------------------------------------AGCGACAACAACATCA------------------------------------------------GAAGC--------------------AGCAACGGCAGCAACAGCAACACCAGCAGCAAAGAACAAGAACCAAAACAGCAGA------------------AAC---A--------------------------------------------ACAGCGAAAA---CA---AA--AGCATCGGC----ATCAGCAG
droKik1 scf7180000300814:9337-9537 - AACTTC-------TGAC--T----------------GAAATTATAATACCCT------------GCA------------AGGGTT-------------------------------------------------------------------------------------------------------------------------------------------GTGAGGAGTCGTTCGA-------CTTCC-----------------------------------------------CACAAATACTGGCGGCCAACTACAACGGCAACCGC--------------------------------------------------GCCAGCCGCCGAAAGC---------------------------------------------------------AACAACAGCATCAGCAGCC-------------------------------------------------------------------AACAACAACAGCAGAGGCAACGTCAGCCG--AAGAAT---------ATCAACAGC---------------GCC---AG-----------------------------------------------------CAGCGAAT-------ATCAACAGC----GTCAGCAG
droFic1 scf7180000453912:810328-810505 + AACTTC-------TGGC--C----------------AAAATTATAATACCCTT--TGCTC--TG-CA------------AGGGTATAATAAAAGTAGGTATATATATAAAAAAAGCGC---------------------------------------------------------G------CGC--CAA-------------------------------GTTGTCTGCAAGTGTTGCA-------CATCG-----------------------------------------------CACAGATGCCAGCGCCGCGATACAAA-------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------CAA-----AAG-GC--------------------------CA-------------------------GCAGCAAT---------------------A--------------------------------------------TCTGC------AGCA---GC------ACAAC----AGCAACAT
droEle1 scf7180000488282:852-1011 + AACTTC-------TGAC--T----------------GAAATTATAATACCCTCT----------GCA------------AGGGTATAAAAACAAC----------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAGACCCTCAAAGAGACGACAACTGAAAGAAGG---CCAAGCA---GGATA------CA------ACAA----C------AGGAGC-----------------------------------------------------------------------------------------------------------------------------------GGCAACAGAGACAAG---G----------------------------------------------------AC---AACGGCAGCAGCAGCAACAACGAC------------------------------------------------------C----ATCAGCA-
droRho1 scf7180000764772:1023-1208 + CACTTT-------TGAC--C----------------AAAATTATAATACCCTCT----------GCA------------AGGGTATAAAAATACTCAGTGA-----AAAA------------AATAG------AGAA------------ATAACCCCTCACCCGCACGAGAAGTCGCA-------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------TGC--------CGCCAGCAGTTGCAGTCGTCACTAGCA------------GT-----------------------CGC--AGTCACAAT------------------------C----------------------------------------------------G---------------------------CCACC------AGC-------AGTCGCAGT------CGCT---GCCCAGCAATCGC----AATCGCAG
droBia1 scf7180000302472:25857-26055 - AACTTC-------TGAC--T----------------GAAATTTGTATACCCTCT----------GCA------------AGGGTATAAAAAGATTACACATATTTAAAAACATATTAAATATTATAAAGTATA----------------AT-------------AACT-GAAAGT-------------------------------AAAAGTTTAGCTC-------------------------------------------------------------------AACTAACCCAGCTC-----------------------------------------------------------------------------------------------------------------ATATGTATATC------------------------------------------------------------------------------------------------------CCAAAT------GCTAG------------------A---AC-------------------------------AAGA------------T---------------------------TTAGC----------------AGACAGAATCGCAA---ATCTTGC--CACACCCTCGTC---AGTTAG
droTak1 scf7180000415386:242154-242333 + TACTTT-------TGCA--G----------------GAATACAATATACCCTT-TTACTC--TA-CGAATGACG-------GGTATAAAAATT----------------------------------------------------------------------------AATA------------------------------------------GATATCA----------------TA-------TTCCCTACAGCAGAGAAGGAGGCGCAACCGGATCTGCTGAACAA---CACCCC------GCCG-------------------------------------------------G----------------------------------------------------------------------------------------TGC------------------------------------------------------------------------CACCGAAAC------GCTCC---------------------CAC-------------------------------AAGC------------G---------------------------CCGCC----------------ACACGCCACCGCGA------------------CCC----ATCTCCAA
droEug1 scf7180000405770:928-1106 - TACTTT-------TCAA--C----------------GAATCTAGTATACCCTT-TTACTC--TA-CGAGTAACG-------GGTATAAAAATG----------------------------------------------------------------------------AAAA-ACT---T---GCGAACCTTACAAAAATAAAA-----------------------------------------------------ACAAAGCAA--------------------------------------------------------------------------------------------------------AGACAGCGGCAATG------ACAA----------------CA---------------------------------------------------------------------------------------------------------GCGGC--------------------AGTGACAAAAGCGGCCGCGACAACAG----------------------CGGCAGC---------------GAC---AA-----------------------------------------------------------CA---GC--GGCAGCGAC----AACAGCGG
dm3 chr3R:10532852-10533042 + TACTCT-------TCAA--C----------------GAATCTAGCATACCCTT-TTACTC--TA-CAAGTAACG-------GGCACAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAG----------------------------------------------------------ACGATGGAGTACCGAATACCGATGGCGATCGCGAGTGGC---------------------CAGCA------AAAG----------------TTGTCATTAGGCAGCACTTAAGTTAACTGCTCGCAGACAC------------------------------------------------------------------------CAC--ATACACCAC------------------------ATACAC-------------------------------------------------------A--------------------------------------------CACCTCGTAG-----------------C-AC----AGCACACA
droSim2 x:6214566-6214695 + TTCGGA-------TGAG-----------------------------------------------------------TTCAGCGTCAAGGAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCA------ACAG----------------CT---------------------------------------------------------------------------------------------------------GCAGC--------------------AGCAACAGGAGCAACAGCAACGGCAG----------------------CAGGAGA--T-GCAACGACAGCAGCAAC---A--------------------------------------------GCAGATGGAGCAAAT--------GGAGCGGC-TTAAGCAGCAA
droSec2 scaffold_65:165483-165644 + TACTTT-------TCTA--C----------------GATTCTAGTATATCCTT-TTACTC--TA-CGAGTAACG-------GGTATAAAATAA-------------AGAG------------AAAGA------AGAA-----------------------------------ATTAT---T---ACAAGC-------TTTTAAGA-----------------------------------------------------AAAGAGCTAGACACATGTGAATGCGCTAG----------GCT------TC--------------------------------------------------------ACAGAGCAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CAAA----------------------------------------------------------------------------------------------------------------------AGGAGT---GC--CAGAA---T----CAAATCAG
droYak3 v2_chrUn_2085:1212-1418 - TACTTT-------TCAA--C----------------GAATCTAGTATACCCTT-TTACTC--TA-CGAGTAACG-------GGTATAACTAGA-------------------------------AAG------------------------------------------GAGA------------------------------------------ACTACAG----------------GA-------CTTCTCACACCAGAA---------------------------------------------------------------------------------------------------------------------------------------AAAAACAGCAGCGGTAGCAGC------------------------------TACGACAACAA--------------------------------------------------------------------------------------------CAAC----------------------------------------------------------------AATA---CCAGCGGCAGCAACGGCAAGCGACATACAAAACTACAAAGGGGAACTGCAA---GACTTCC--CACACCAGAGAAAAGCAGCAA
droEre2 scaffold_4820:7613076-7613218 - ATGCGG-------TGA----------------------------------------------------------------AGGTGGAGGACGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCTGCAGATCAC---CAGCGA------GCGG-------------------------------------------------AGGCCACGAGGTAGGCCGTATAAGCC------ACGG----------------CTGCAGC-----------------------------------------------------------------------------------------------------------------------------TGCAACAGCATCAGCTGCAGCCGCAG----------------------CAGAAGT--T---------------------------------------------------------------------------GCAAGT---GC--AGCAGCAGC----AGCAGCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CACATTTGGATTTTGCA--C----------------AAATACAATATACTCTT-ATACCC---A-TTTTTAATGGGTTCAGGGTATAAAAAGT----------------------------------------------------------------------------GAAGGCGCAGCTTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCAAAGCTA------ACCG----------------CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCTCCAC------------------------AGCCAC-------------------------------------------------------A--------------------------------------------GGAGTCGCAGCAAAT---GC--CACAGCCGC----ATCAGCAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--......................................................................................................................................................................................2356.2031005000000000000000003000300074540000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGC..................................................................................................................................................................................2755.60280015200000000000000000000101010111012001000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CA.........................................................................................................................................................................................2355.60280010010000000000000000000300080120110000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--......................................................................................................................................................................................2455.0025001000000000000000000000011016280000400100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGG...................................................................................................................................................................................2654.0020009000000000000000001001111210100001000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--A.....................................................................................................................................................................................2553.8019000010000000000000000001041312010020300000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------...........................................................................................................................................................................................2153.0015000010000000000000002000020104030100100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AG....................................................................................................................................................................................2552.6013005000000000000000000000000031020101000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CA.........................................................................................................................................................................................2252.6013002000000000000000002000000053000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATG....................................................................................................................................................................................................................................................................2052.4012000000000000000000000000000006230010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------C..........................................................................................................................................................................................2152.4012002000000000010000002000001010220000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------...........................................................................................................................................................................................2052.4012002000000000000000001000000041110100000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AG....................................................................................................................................................................................2652.4012000000000000000000000000100005040000200000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------C..........................................................................................................................................................................................2252.2011001000000000000000000000030004000020001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATG....................................................................................................................................................................................................................................................................1951.809000000000000000000000000000030320000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--A.....................................................................................................................................................................................2451.809005000000000000000000000001000010000001000000000000000000000010
.....................................................................................................................................................................................TC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGG.............................................................................................................................................................................................................................................................................................................................................2321.503000001000000000000000000000010000100000000000000000000000000000
.....................................................................................................................................................................................TC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGC............................................................................................................................................................................................................................................................................................................................................2421.503000000000000000000001000000010000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G----------------CTACACATGCGCC-------------------GCAGATG....................................................................................................................................................................................................................................................................2141.255000000000000000000000000000010300100000000000000000000000000000
.........................................................................GGGTTCAGGGTATAAAAAGT----------------------------------------------------------------------------GAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2631.003000000000000000000000000000003000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------GGAGTCGCAGCAAAT---GC--CACAG................2321.002000000000000000000000000020000000000000000000000000000000000000
....................................................................................................................................................................................TTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GG................................................................................................................................................................................................................................................................................................................................................2121.002000000000000000000000000000010000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAC------------------------AGCCAC-------------------------------------------------------A--------------------------------------------GGAGTCGCA..................................2121.002000000000000000000002000000000000000000000000000000000000000000
....................................................................................................................................................................................TTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGG.............................................................................................................................................................................................................................................................................................................................................2421.002000001000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................TTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCAA..........................................................................................................................................................................................................................................................................................................................................2721.002000000000000000000000000000010010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCTC................................................................................................................................................................................2950.804001000000000000000000000000010010000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGC..................................................................................................................................................................................2850.804000000000000000000000000010002000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGG...................................................................................................................................................................................2750.804001000000000000000000000020001000000000000000000000000000000000
CACATTTGGATTTTGCA--C----------------AAATACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.7515000002000000000000004000110300000001300000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G----------------CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--......................................................................................................................................................................................2540.753000000000000000000001000000010010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TA------ACCG----------------CTACACATGCGCC-------------------GCAGATG....................................................................................................................................................................................................................................................................2640.753000000000000000000000000001000020000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAT--......................................................................................................................................................................................2350.603000000000000000000000000000010110000000000000000000000000000000
....................................................................................................................................................................................TTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCA...........................................................................................................................................................................................................................................................................................................................................2620.501000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------------------------------------A--------------------------------------------GGAGTCGCAGCAAAT---GC--CAC..................2220.501000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................TC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCAA..........................................................................................................................................................................................................................................................................................................................................2620.501000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G----------------CTACACATGCGCC-------------------GCAGAT.....................................................................................................................................................................................................................................................................2040.502000000000000000000000000001010000000000000000000000000000000000
....................................................................................................................................................................................TTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGC............................................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000000010000000000000000000000000000000000
...................................................................................TATAAAAAGT----------------------------------------------------------------------------GAAGGCGCAGCTTC--AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAC------------------------AGCCAC-------------------------------------------------------A--------------------------------------------GGAGTCGCAGCAA..............................2520.501000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------GGAGTCGCAGCAAAT---GC--CAC..................2120.501000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAC------------------------AGCCAC-------------------------------------------------------A--------------------------------------------GGAGTCGCT..................................2120.501000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------GGAGTCGCAGCAAAT---GC--CC...................2020.501000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................TC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTG..............................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................TTC--AGCGACTTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGT...............................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G----------------CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CA.........................................................................................................................................................................................2440.502000000000000000000000000000000200000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CC.........................................................................................................................................................................................2350.402000000000000000000000000000000000100000100000000000000000000000
CACATTTGGATTTTGCA--C----------------AAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.408000000000000000000000000000070000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CC.........................................................................................................................................................................................2250.402001000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGC..................................................................................................................................................................................2650.402002000000000000000000000000000000000000000000000000000000000000
CACATTTGGATTTTGCA--C----------------AAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.357000000000000000000000000000031210000000000000000000000000000000
CACATTTGGATTTTGCA--C----------------AAATACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.357000000000000000000000000001050010000000000000000000000000000000
.............................................................................TCAGGGTATAAAAAGT----------------------------------------------------------------------------GAAGGCGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................TACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCAAAGCTA------ACC............................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................TACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCAAAGCTA------...............................................................................................................................................................................................................................................................................................................................2230.331000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGGCAAAGCTA------ACCG----------------CTACACATGCGCC-------------------...........................................................................................................................................................................................................................................................................2840.251000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AAGCTA------ACCG----------------CTACACATGCGCC-------------------...........................................................................................................................................................................................................................................................................2340.251000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AGCTA------ACCG----------------CTACACATGCGC...............................................................................................................................................................................................................................................................................................2140.251000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G----------------CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--C.....................................................................................................................................................................................2640.251000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TA------ACCG----------------CTACACATGCGCC-------------------GCAGAT.....................................................................................................................................................................................................................................................................2540.251000000000000000000000000000000100000000000000000000000000000000
.......................................................TACCC---A-TTTTTAATGGGTTCAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.255000000000000000000000000000000000000000000000000000000000000005
CACATTTGGATTTTGCA--C----------------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.255000000000000000000000000000101210000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GCTA------ACCG----------------CTACACATGCGCC-------------------GCAGA......................................................................................................................................................................................................................................................................2640.251000000000000000000000000000010000000000000000000000000000000000
CACATTTGGATTTTGCA--C----------------AAATACAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.255000000000000000000001000000030100000000000000000000000000000000
...............................................................................................................................................................................................TTACGG------------------------------------------------------------CAGA---------------------------------------------------------------------------------------------------------------GGTGGCAAAGC.......................................................................................................................................................................................................................................................................................................................................2140.251000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AA....................................................................................................................................................................................2550.201000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--C.....................................................................................................................................................................................2450.201000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCT.................................................................................................................................................................................2750.201001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCT.................................................................................................................................................................................2850.201001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCTA................................................................................................................................................................................2950.201000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGT...................................................................................................................................................................................2650.201001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CT.........................................................................................................................................................................................2350.201000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--A.....................................................................................................................................................................................2150.201001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCC.................................................................................................................................................................................2950.201000000000000000000000000000010000000000000000000000000000000000
CACATTTGGATTTTGCA--C----------------AAATACAATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.204000000000000000000000000000000040000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGG...................................................................................................................................................................................2250.201000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGG...................................................................................................................................................................................2550.201001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAA--......................................................................................................................................................................................2450.201000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--AGGCTT................................................................................................................................................................................2950.201000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACACATGCGCC-------------------GCAGATGC------------------------------------------------------------------------CAC--T.....................................................................................................................................................................................2450.201000000000000000000000000000010000000000000000000000000000000000
......................................................................AATGGGTTCAGGGTATAAAAAGT----------------------------------------------------------------------------GAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.201000001000000000000000000000000000000000000000000000000000000000
....................................................................TTAATGGGTTCAGGGTATAAAAAGT----------------------------------------------------------------------------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.111000000000000000000000000010000000000000000000000000000000000000
CACATTTGGATTTTGCA--C----------------AAATAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000200000000000000000000000000000000
....................................................................TTAATGGGTTCAGGGTATAAAAAGT----------------------------------------------------------------------------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26160.061000000000000000000000000000010000000000000000000000000000000000
..............................................TACTCTT-ATACCC---A-TTTTTAATGGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000100000000000000000000000000000000000
CACATTTGGATTTTGCA--C----------------AAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000100000000000000000000000
..............................................TACTCTT-ATACCC---A-TTTTTAATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................CC---A-TTTTTAATGGGTTCAGGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TACTTT-------TTCA--C----------------AAAACCATTATACCCTG-ATTTCC--CA-TTTTCAATGGGTTCAGGGTATAAAAATT-C-------------------------------------AACAGATTTTAGCAGAAGCAACCC---------------------------------------------------GA-----------A------------------ATTTCAGC-----------A-----------------------------CAA---TAAACT------TCAT-------------------------------------------------G----------------------------------------------------------------------------------------TTT------------------------------------------------------------------------TGTT----------------GGCAACAGCCACAAC-------------------------------------------------------AGC---AACA-----------------------------------------------------TCAATT-------GACAGCAGC----AACAGCAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............CA--C----------------AAAACCATTATACCCTG-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204400000
........................................................TTCC--CA-TTTTCAATGGGTTCAGGGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.............TTCA--C----------------AAAACCATTATACCCTG-ATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
droGri2
CCTATC-------TGTGCAC----------------AGCATCGTTATACCCTT-TTAAAA--CA-TTTTTAATG-------GGTTCAGTTTGG-------------GACA------------TAAAA------AAA-----------------------------------AGCTGCA------AAACGA-------GCGTAAAA-----------------------------------------------------CGCGAGCGAAACGCGCGCGTTT--AAT----GA---TA------------------------ACCGTCGCATACG--------------------------------------------------GG------ACAA----C------------A-----------------------------------------------------------------------------------------------------------------------ACAAC------AACAACAGCAACAAC-------------------------------------------------------AAC---AA-----------------------------------------------------------CG---AC--AACAGCAAC----AACAACA-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAAC-------------------------------------------------------AAC---AA-----------------------------------------------------------CG---AC--AAC..................23150.07110
droWil2
TACATT-------TTGG--C----------------GACTTTAATATACCATT-TCACCC--TA-TGGGTGTAT-------GGTATAAAAAAA----------------------------------------------------------------------------CAATCCATTTCCAA--AATGACTAAAGA-----CAACTGGGTTAAAGCCGCAG----------------TCCTTCAGC-----------AGGGTGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGACAGCATC---CACC-----------------------------------------------------TCAAGT-----------GCATC----AACCGCA-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................TAAAGCCGCAG----------------TCCTTCAGC-----------AGGGTGG--------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................27200.45903060
...............................................................................................................................................................................................TAAAGA-----CAACTGGGTTAAAGCCGCAG----------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.30600060
.................................................................................................................................................................................TTCCAA--AATGACTAAAGA-----CAACTGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.30601050
.........................................................................................................................................................................................................................................................................................................TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTC........................................................................................................26140.21302010
...........................................................................................................................................................................................................................................................................................................T------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCG......................................................................................................26140.14202000
.........................................................................................................................................................................................................................................................................................................TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------G...........................................................................................................23160.13202000
.........................................................................................................................................................................................................................................................................................................TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GC..........................................................................................................24160.13202000
.........................................................................................................................................................................................................................................................................................................TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCT.........................................................................................................25160.13211000
......................................................................................................................................................................................................................................................................TGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---.....................................................................................................................................................24160.13202000
.....................................................................................................................................................................................................................................................................GTGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTG.........................................................................................................................................................24160.13202000
...................................................................................................................................................................................................................TAAAGCCGCAG----------------TCCTTCAGC-----------AGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200020
...................................................................................................................................................................................................................................................................................................................................................................................AGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGACAGCATC---CAC........................................................................................27130.08100010
................................................................................................................................................................................................................................................................................................................................................................................AGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGACAGCA................................................................................................25140.07101000
..................................................................................................................................................................................................................................................................................................................TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGAC....................................................................................................27140.07101000
.............................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGACA...................................................................................................25140.07101000
......................................................................................................................................................................................................................................................................................................................................................................................C-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGACAGCAT...............................................................................................20140.07100010
.........................................................................................................................................................................................................................................................................................................TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCC.......................................................................................................27140.07101000
..................................................................................................................................................................................................................................................................................................................................................................................CAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GCTCCGACAGCA................................................................................................23140.07101000
......................................................................................................................................................................................................................................................................TGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------G...........................................................................................................26160.06101000
........................................................................................................................................................................................................................................................................G--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---.....................................................................................................................................................22160.06110000
.......................................................................................................................................................................................................................................................................GG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------G...........................................................................................................25160.06101000
.....................................................................................................................................................................................................................................................................GTGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---.....................................................................................................................................................25160.06101000
......................................................................................................................................................................................................................................................................TGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CTGA---T----------------------------------------GC..........................................................................................................27160.06101000
....................................................................................................................................................................................................................................................AGC-----------AGGGTGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------C...........................................................................................................................................................28160.06101000
....................................................................................................................................................................................................................AAAGCCGCAG----------------TCCTTCAGC-----------AGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGCATC---CACC-----------------------------------------------------TCAAGT-----------GCATC----........25200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACAGCATC---CACC-----------------------------------------------------TCAAGT-----------GCAT.............26200.05100010
......................................................................................................................................................................................A--AATGACTAAAGA-----CAACTGGGTTAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.............................................................................................................................................................................................ACTAAAGA-----CAACTGGGTTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100
.....................................................................................TAAAAAAA----------------------------------------------------------------------------CAATCCATTTCCAA--AATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
............................................................................................................................................................................TCCATTTCCAA--AATGACTAAAGA-----CAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...........................................................................................................................................................................................TGACTAAAGA-----CAACTGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
.ACATT-------TTGG--C----------------GACTTTAATATACCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
......................................................................................................................................................................................................................................................C-----------AGGGTGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCAGG................................................................................................................................................................................................................................................................................................................................................23200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATC---CACC-----------------------------------------------------TCAAGT-----------GCATC----A.......22200.05100010
..............................................................................................................................................................................................................................................TCCTTCAGC-----------AGGGTGG--------------------------------TAT------TC--------------------------------------------------------AT........................................................................................................................................................................................................................................................................................................................................................23200.05101000
..............................................................................................................................................................................................................................................TCCTTCAGC-----------AGGGTGG--------------------------------TAT------TC--------------------------------------------------------ATGCAGCA..................................................................................................................................................................................................................................................................................................................................................29200.05101000
...................................................................................................................................................................................................................TAAAGCCGCAG----------------TCCTTCAGC-----------AGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.................................................................................................................................................................................TTCCAA--AATGACTAAAGA-----CAACTGGGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
..................................................................................................................................................................................................................TTAAAGCCGCAG----------------TCCTTCAGC-----------AGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GCTCCGACAGCATC---CACC-----------------------------------------------------TCAAGT-----------GCA..............28200.05101000
..................................................................................................................................................................................................................TTAAAGCCGCAG----------------TCCTTCAGC-----------AGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GCTCCGACAGCATC---CACC-----------------------------------------------------TCAAGT-----------.................25200.05101000
dp5
CACTTCCACTTTTACCA--C----------------AAACCTAATATACCCAA-ATACTCCTTT-TGAGTACCG-------GGTATAAAAATG-C-------------------------------------A--------------------------------------GC-AT------CGG--CAAGC--------------TGAATGTTAGATGGAA----------------TACTCCAAT-------------------------------------------------------------------------------------------------------------------------------------------------CGG----------------ATACATTTACTTC-------------------GTAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAACCGAG---------TCGAAAGC----TGCATCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------G...............................................................................................................25101.901901200000160
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GA..............................................................................................................26101.601601100000320
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------................................................................................................................24111.18130900000400
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTC........................................................................................................................................................................20121.08130700000330
....................................................................................ATAAAAATG-C-------------------------------------A--------------------------------------GC-AT------CGG--CAAGC--------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............CCA--C----------------AAACCTAATATACCCAA-AT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAACCGAG---------TCGAAAGC----........2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAACCGAG---------TC..................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------G...............................................................................................................22120.4250300000020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GA..............................................................................................................22120.4250500000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------C.....................................2490.3330300000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------......................................27100.3030300000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AA................................................................................................................................................23110.2730300000000
...............................................................................................................................................................................T------CGG--CAAGC--------------TGAATGTTAGATGGAA----------------TAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.2520000000020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------..................................................................................................................................................21120.2530100000020
...............................................................................................................................................................................................C--------------TGAATGTTAGATGGAA----------------TACTCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................26120.2530000000300
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAACC................................2590.2220200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAAC.................................2590.2220200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------..................................................................................................................................................18140.2130300000000
...................................................................................................................................................................................................................GTTAGATGGAA----------------TACTCCAAT-------------------------------------------------------------------------------------------------------------------------------------------------CGG----------------...........................................................................................................................................................................................................................................................................................................23110.1820200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------C...............................................................................................................25110.1820000000020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------A.................................................................................................................................................22120.1720200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------................................................................................................................21130.1520200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAG...........................................................................................................................................................................17140.1420000000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------C.....................................2770.1410100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAAC.................................2680.1310000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAAC.................................2880.1310100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAAC.................................2980.1310100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------C.....................................2390.1110010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CG....................................2590.1110000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------C.....................................2590.1110010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CG....................................2690.1110100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAA..................................2490.1110000000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGAACCG...............................2490.1110100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGA...................................2490.1110100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------CGA...................................2690.1110100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GT..............................................................................................................26100.1010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------G...............................................................................................................23100.1010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------A...............................................................................................................25110.0910100000000
....................................................................................................................................................................................................................TTAGATGGAA----------------TACTCCAAT-------------------------------------------------------------------------------------------------------------------------------------------------CGG----------------ATACA......................................................................................................................................................................................................................................................................................................27110.0910010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GA..............................................................................................................23120.0810100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGG------------------------------------------------------------------------CACTG------GAGAGCTC........................................................................................................................................................................19120.0810100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCTCT---------------------..................................................................................................................................................21120.0810100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------GAT-----------------------------------------------------------------------......................................23120.0810100000000
...................................................................................................................................................................................................................................................CAAT-------------------------------------------------------------------------------------------------------------------------------------------------CGG----------------ATACATTTACT................................................................................................................................................................................................................................................................................................18120.0810100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGG------------------------------------------------------------------------CACTG------GAGAGCTC........................................................................................................................................................................18120.0810100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------G...............................................................................................................21120.0810100000000
..............................................................................................................................................................................................................TGAATGTTAGATGGAA----------------TACTCCAAT-------------------------------------------------------------------------------------------------------------------------------------------------C.............................................................................................................................................................................................................................................................................................................................26130.0810100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AA................................................................................................................................................19130.0810000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGC..........................................................................................................................................................................18130.0810000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG------------------------------------------------------------------------CACTG------GAGAGCTCC---------------------AAC-------------------------------................................................................................................................20130.0810100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGCT.........................................................................................................................................................................19130.0810100000000
...............................................................................................................................................................................................C--------------TGAATGTTAGATGGAA----------------TAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0710000000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGG------------------------------------------------------------------------CACTG------GAGAGT..........................................................................................................................................................................18140.0710000000010
.............................................................................................................................................................................................AGC--------------TGAATGTTAGATGGAA----------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0710000000100
..............................................................................................................................................................................................................TGAATGTTAGATGGAA----------------TAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.0710000000010
droPer2
CACATCCACTTTTACCA--C----------------AAATCTAATATACCCCA-ATACTCATTT-TGAGTATCG-------GGTATAAAAACA----------------------------------------------------------------------------GACGCC-----T---GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCTGGC---CCACGCACTGGGCGACGACGTCC------AGAG----------------CAGCCATTGAGCCGTT------------------------------------------------------------------------------------------------CCC--AGGCACAAC------------------------A---ACAG----------------------CAGCAGC------------------T--------------------------------------------------ACA------GCAGCT---GC--AACAGCAGC----CTCAGCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------CCC--AGGCACAAC------------------------A---ACAG----------------------CAG....................................................................................................................22100.505050000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------CCC--AGGCACAAC------------------------A---ACAG----------------------CAGC...................................................................................................................23100.404040000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------CCC--AGGCACAAC------------------------A---ACAG----------------------CA.....................................................................................................................21120.253030000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------CCC--AGGCACAAC------------------------A---ACAG----------------------CAGCAG.................................................................................................................25100.202020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAC------------------------A---ACAG----------------------CAGCAGC------------------T--------------------------------------------------ACA------GC................................2490.111010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------------------A---ACAG----------------------CAGCAGC------------------T--------------------------------------------------ACA------GCAG..............................2590.111010000
............TACCA--C----------------AAATCTAATATACCCCA-ATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102020000
.............................................................................................................................................................................................................................................................................................................................................................TGCCTCTGGC---CCACGCACTGGG................................................................................................................................................................................................................................................................................................................................................22200.102020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------CCC--AGGCACAAC------------------------A---ACAG----------------------CAG....................................................................................................................21100.101010000
.............................................................................................................................................................................................................................................................................................................................................................TGCCTCTGGC---CCACGCACTGGGCGAC............................................................................................................................................................................................................................................................................................................................................26200.102020000
...............CA--C----------------AAATCTAATATACCCCA-ATAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
.......................................................................................................................................................................................................................................................................................................................................................................................GACGACGTCC------AGAG----------------CAGCC......................................................................................................................................................................................................................................................................................................19200.051000001
................................................................................................................................................................................................................................................................................................................................................................................................C------AGAG----------------CAGCCATTGAGCCGTT------------------------------------------------------------------------------------------------...........................................................................................................................................................................................21200.051000001
.................................................................................................................................................................................................................................................................................................................................................................TCTGGC---CCACGCACTGGGCGACGAC.........................................................................................................................................................................................................................................................................................................................................25200.051010000
...................................................................................................................................................................................................................................................................................................................................................................TGGC---CCACGCACTGGGCGACGACGTC......................................................................................................................................................................................................................................................................................................................................26200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................CACGCACTGGGCGACGACGTCC------AGAG----------------...........................................................................................................................................................................................................................................................................................................26200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATTGAGCCGTT------------------------------------------------------------------------------------------------CCC--AGGCA.................................................................................................................................................................................23200.051010000
...................................................CA-ATACTCATTT-TGAGTATCG-------GGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droAna3
CACTTT-------TGAC--C----------------AAAATTATAATACCCTCT----------GCA------------AGGGTATAAAAACATC----------------------------------------------------------------------------AGCATCA------G----------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATCAGTCACAGCAACAGTGAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--CAAAGCAAC----AGCAACAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--C....................22190.5310091000
................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGC.................................................................................................................................................................................................................................22200.50100100000
.......................................................................................................................................................................................................................................................................................................................................................................................................T-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATC.....................................................................................................................................................................................................................27110.455050000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------C......................................................................................................................25200.306060000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGG...................................................................................................................28200.255041000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGA---------------------CTAGCAGAAGAAACATCAGT..................................................................................................................................................................................................................25120.253012000
.......................................................................................................................................................................................................................................................................................................................................................................................................T-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACA.......................................................................................................................................................................................................................25110.182200000
...........................................................................................................................................................................................................................................................................................................................................................................................................G---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATC.....................................................................................................................................................................................................................24120.172020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---------------------CTAGCAGAAGAAACATCAGT..................................................................................................................................................................................................................22130.152110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--AAGCAGGAG------------------------C---ACAT----------------------CAGG...................................................................................................................20200.153030000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------..............................................................................................23200.153030000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------.......................................................................................................................27200.153120000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGG...................................................................................................................24200.153030000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------.......................................................................................................................24200.153030000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGGAG------------------------C---ACAT----------------------CAGG...................................................................................................................18200.153111000
..............................................................................................................................................................................ATCA------G----------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTG............................................................................................................................................................................................................................................................22140.142101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------CTAGCAGAAGAAACATCAGTCACAGCA...........................................................................................................................................................................................................2880.131100000
.................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAA.............................................................................................................................................................................................................................2580.131100000
.................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAG............................................................................................................................................................................................................................2680.131010000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACA.......................................................................................................................................................................................................................2790.111100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--.....................23180.112011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------A.............................................................................................27200.102020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--AAGCAGGAG------------------------C---ACAT----------------------CAGGA..................................................................................................................21200.102110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGG...................................................................................................................22200.102200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAG.................................................................................................................25200.102200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAG.................................................................................................................22200.102110000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGA..............................................................................................................................................................................................................................20200.102110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------...........................................26200.102110000
..................................................................................................................................................................................................................................................................................................................................................................................................CAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGA..............................................................................................................................................................................................................................23200.102020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAC-----CCC--AAGCAGGAG------------------------C---AC...............................................................................................................................................21200.102020000
......................................................................................................................................................................................................................................................................................................................................................................................................AT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATC.....................................................................................................................................................................................................................28100.101010000
...........................................................................................................................................................................................................................................................................................................................................................................................................G---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATCAGTC.................................................................................................................................................................................................................28110.091010000
.......................................................................................................................................................................................................................................................................................................................................................................................................T-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACAT......................................................................................................................................................................................................................26110.091100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATCAGTC.................................................................................................................................................................................................................27110.091001000
.............................................................................................................................................................................CATCA------G----------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------C.....................................................................................................................................................................................................................................25120.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACAT......................................................................................................................................................................................................................25120.081100000
..........................................................................................................................................................................................................................................................................................................................................................................................................AG---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATCA....................................................................................................................................................................................................................26120.081010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGA---------------------CTAGCAGAAGAAACATCAGTC.................................................................................................................................................................................................................25120.081010000
...........................................................................................................................................................................................................................................................................................................................................................................................................G---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATCAGC..................................................................................................................................................................................................................27120.081010000
...........................................................................................................................................................................................................................................................................................................................................................................................................G---------C------------------------------------------------CGTGA---------------------CTAGCAGAAGAAACATCAGT..................................................................................................................................................................................................................27120.081001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---------------------CTAGCAGAAGAAACATCAGC..................................................................................................................................................................................................................22130.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---------------------CTAGCAGAAGAAACATC.....................................................................................................................................................................................................................19130.081010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAAACATCAGTCACAGC............................................................................................................................................................................................................21130.081010000
..............................................................................................................................................................................ATCA------G----------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CC....................................................................................................................................................................................................................................25140.071010000
.................................................................................................................................................................................A------G----------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CT....................................................................................................................................................................................................................................22140.071100000
..............................................................................................................................................................................ATCA------G----------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CT....................................................................................................................................................................................................................................25140.071010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAAGAAACATCAGTCACA..............................................................................................................................................................................................................22140.071100000
.............................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAG..................................................................................................................................................................................................................................22150.071001000
.............................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGC.................................................................................................................................................................................................................................23150.071010000
.............................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCA................................................................................................................................................................................................................................24150.071010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--C....................28170.061010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--.....................27170.061010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--.....................28170.061010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---G........................20190.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------..............................................................................................29200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGT------------------..............................................................................................26200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------...........................................28200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGG...................................................................................................................27200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------A.............................................................................................28200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAG.................................................................................................................26200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAC-----CCC--AAGCAGGAG------------------------C---.................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAG....................................................................................................................22200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------C.............................23200.051001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------...........................................27200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGAACAC-----CCC--AAGCAGGAG------------------------C---ACA..............................................................................................................................................26200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------..............................................................................................26200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AAGCAGGAG------------------------C---ACAT----------------------CAGGAG.................................................................................................................21200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------T......................................................................................................................25200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------C.............................24200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAC-----CCC--AAGCAGGAG------------------------C---.................................................................................................................................................21200.051000100
................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCA................................................................................................................................................................................................................................23200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAC-----CCC--AAGCAGGAG------------------------C---A................................................................................................................................................21200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------..............................................................................................27200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGAACAC-----CCC--AAGCAGG...............................................................................................................................................................................20200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC--AAGCAGGAG------------------------C---ACAT----------------------C......................................................................................................................18200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-----CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAC.................................................................................................................26200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT----------------------CAGGAGC------------------AAT---A--------------------------------------------T------------CA---GC--C....................21200.051001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAACAC-----CCC--AAGCAGGAG------------------------C---.................................................................................................................................................22200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................AGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAGA..............................................................................................................................................................................................................................22200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC--AAGCAGGAG------------------------C---ACAT----------------------CAGGAGC------------------AA............................................................................................26200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAT-CAG---------C------------------------------------------------CGTGA---------------------CTAGCAG...............................................................................................................................................................................................................................23200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAC-----CCC--AAGCAGGAG------------------------C---ACA..............................................................................................................................................23200.051010000
droBip1
CACTTT-------TGGACACTCCTTCACTTTTGGACAAAATTATAATACCCTCC----------GCA------------AGGGTATAACAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACATCCGG--------------------------------------------------AGCAGCAA-CGG---------C------------------------------------------------AGCGACAACAACATCA------------------------------------------------GAAGC--------------------AGCAACGGCAGCAACAGCAACACCAGCAGCAAAGAACAAGAACCAAAACAGCAGA------------------AAC---A--------------------------------------------ACAGCGAAAA---CA---AA--AGCATCGGC----ATCAGCAGSizeHit CountTotal NormTotal
No Reads
droKik1
AACTTC-------TGAC--T----------------GAAATTATAATACCCT------------GCA------------AGGGTT-------------------------------------------------------------------------------------------------------------------------------------------GTGAGGAGTCGTTCGA-------CTTCC-----------------------------------------------CACAAATACTGGCGGCCAACTACAACGGCAACCGC--------------------------------------------------GCCAGCCGCCGAAAGC---------------------------------------------------------AACAACAGCATCAGCAGCC-------------------------------------------------------------------AACAACAACAGCAGAGGCAACGTCAGCCG--AAGAAT---------ATCAACAGC---------------GCC---AG-----------------------------------------------------CAGCGAAT-------ATCAACAGC----GTCAGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
AACTTC-------TGGC--C----------------AAAATTATAATACCCTT--TGCTC--TG-CA------------AGGGTATAATAAAAGTAGGTATATATATAAAAAAAGCGC---------------------------------------------------------G------CGC--CAA-------------------------------GTTGTCTGCAAGTGTTGCA-------CATCG-----------------------------------------------CACAGATGCCAGCGCCGCGATACAAA-------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------CAA-----AAG-GC--------------------------CA-------------------------GCAGCAAT---------------------A--------------------------------------------TCTGC------AGCA---GC------ACAAC----AGCAACATSizeHit CountTotal NormTotal
No Reads
droEle1
AACTTC-------TGAC--T----------------GAAATTATAATACCCTCT----------GCA------------AGGGTATAAAAACAAC----------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAGACCCTCAAAGAGACGACAACTGAAAGAAGG---CCAAGCA---GGATA------CA------ACAA----C------AGGAGC-----------------------------------------------------------------------------------------------------------------------------------GGCAACAGAGACAAG---G----------------------------------------------------AC---AACGGCAGCAGCAGCAACAACGAC------------------------------------------------------C----ATCAGCA-SizeHit CountTotal NormTotal
No Reads
droRho1
CACTTT-------TGAC--C----------------AAAATTATAATACCCTCT----------GCA------------AGGGTATAAAAATACTCAGTGA-----AAAA------------AATAG------AGAA------------ATAACCCCTCACCCGCACGAGAAGTCGCA-------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------TGC--------CGCCAGCAGTTGCAGTCGTCACTAGCA------------GT-----------------------CGC--AGTCACAAT------------------------C----------------------------------------------------G---------------------------CCACC------AGC-------AGTCGCAGT------CGCT---GCCCAGCAATCGC----AATCGCAGSizeHit CountTotal NormTotal
No Reads
droBia1
AACTTC-------TGAC--T----------------GAAATTTGTATACCCTCT----------GCA------------AGGGTATAAAAAGATTACACATATTTAAAAACATATTAAATATTATAAAGTATA----------------AT-------------AACT-GAAAGT-------------------------------AAAAGTTTAGCTC-------------------------------------------------------------------AACTAACCCAGCTC-----------------------------------------------------------------------------------------------------------------ATATGTATATC------------------------------------------------------------------------------------------------------CCAAAT------GCTAG------------------A---AC-------------------------------AAGA------------T---------------------------TTAGC----------------AGACAGAATCGCAA---ATCTTGC--CACACCCTCGTC---AGTTAGSizeHit CountTotal NormTotal
No Reads
droTak1
TACTTT-------TGCA--G----------------GAATACAATATACCCTT-TTACTC--TA-CGAATGACG-------GGTATAAAAATT----------------------------------------------------------------------------AATA------------------------------------------GATATCA----------------TA-------TTCCCTACAGCAGAGAAGGAGGCGCAACCGGATCTGCTGAACAA---CACCCC------GCCG-------------------------------------------------G----------------------------------------------------------------------------------------TGC------------------------------------------------------------------------CACCGAAAC------GCTCC---------------------CAC-------------------------------AAGC------------G---------------------------CCGCC----------------ACACGCCACCGCGA------------------CCC----ATCTCCAASizeHit CountTotal NormTotal
No Reads
droEug1
TACTTT-------TCAA--C----------------GAATCTAGTATACCCTT-TTACTC--TA-CGAGTAACG-------GGTATAAAAATG----------------------------------------------------------------------------AAAA-ACT---T---GCGAACCTTACAAAAATAAAA-----------------------------------------------------ACAAAGCAA--------------------------------------------------------------------------------------------------------AGACAGCGGCAATG------ACAA----------------CA---------------------------------------------------------------------------------------------------------GCGGC--------------------AGTGACAAAAGCGGCCGCGACAACAG----------------------CGGCAGC---------------GAC---AA-----------------------------------------------------------CA---GC--GGCAGCGAC----AACAGCGGSizeHit CountTotal NormTotal
No Reads
dm3
TACTCT-------TCAA--C----------------GAATCTAGCATACCCTT-TTACTC--TA-CAAGTAACG-------GGCACAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAG----------------------------------------------------------ACGATGGAGTACCGAATACCGATGGCGATCGCGAGTGGC---------------------CAGCA------AAAG----------------TTGTCATTAGGCAGCACTTAAGTTAACTGCTCGCAGACAC------------------------------------------------------------------------CAC--ATACACCAC------------------------ATACAC-------------------------------------------------------A--------------------------------------------CACCTCGTAG-----------------C-AC----AGCACACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................TGGAGTACCGAATACCGATGG.............................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CCGATGGCGATCGCGAGTGGC---------------------..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ATACACCAC------------------------ATACAC-------------------------------------------------------A--------------------------------------------CA.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGTACCGAATACCGATGGCGA..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TACCGAATACCGATGGCGA..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AA--C----------------GAATCTAGCATACCCTT-TTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCAA--C----------------GAATCTAGCATACCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................................CCCTT-TTACTC--TA-CAAGTAACG-------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....T-------TCAA--C----------------GAATCTAGCATACCCTT-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TT-TTACTC--TA-CAAGTAACG-------GG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................T-TTACTC--TA-CAAGTAACG-------GG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GAATACCGATGGCGAAG........................................................................................................................................................................................................................................................................................................................................................................17200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TAGCATACCCTT-TTACTC--TA-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AATCTAGCATACCCTT-TTACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TACCCTT-TTACTC--TA-CAAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ATCTAGCATACCCTT-TTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCAA--C----------------GAATCTAGCATACCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
droSim2
TTCGGA-------TGAG-----------------------------------------------------------TTCAGCGTCAAGGAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCA------ACAG----------------CT---------------------------------------------------------------------------------------------------------GCAGC--------------------AGCAACAGGAGCAACAGCAACGGCAG----------------------CAGGAGA--T-GCAACGACAGCAGCAAC---A--------------------------------------------GCAGATGGAGCAAAT--------GGAGCGGC-TTAAGCAGCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGACAGCAGCAAC---A--------------------------------------------GCAGAT.....................................2311.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACGGCAG----------------------CAGG...................................................................................................................2011.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---A--------------------------------------------GCAGATGGAGCA...............................1920.50100010000000000000
droSec2
TACTTT-------TCTA--C----------------GATTCTAGTATATCCTT-TTACTC--TA-CGAGTAACG-------GGTATAAAATAA-------------AGAG------------AAAGA------AGAA-----------------------------------ATTAT---T---ACAAGC-------TTTTAAGA-----------------------------------------------------AAAGAGCTAGACACATGTGAATGCGCTAG----------GCT------TC--------------------------------------------------------ACAGAGCAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------CAAA----------------------------------------------------------------------------------------------------------------------AGGAGT---GC--CAGAA---T----CAAATCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................T-TTACTC--TA-CGAGTAACG-------GGTATAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
droYak3
TACTTT-------TCAA--C----------------GAATCTAGTATACCCTT-TTACTC--TA-CGAGTAACG-------GGTATAACTAGA-------------------------------AAG------------------------------------------GAGA------------------------------------------ACTACAG----------------GA-------CTTCTCACACCAGAA---------------------------------------------------------------------------------------------------------------------------------------AAAAACAGCAGCGGTAGCAGC------------------------------TACGACAACAA--------------------------------------------------------------------------------------------CAAC----------------------------------------------------------------AATA---CCAGCGGCAGCAACGGCAAGCGACATACAAAACTACAAAGGGGAACTGCAA---GACTTCC--CACACCAGAGAAAAGCAGCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAA--------------------------------------------------------------------------------------------CAAC----------------------------------------------------------------AATA---CCAGCGGC............................................................................2430.33101000000000
...........................................................................................................................................................................................................................................................TCACACCAGAA---------------------------------------------------------------------------------------------------------------------------------------AAAAACAGCAGCGG...........................................................................................................................................................................................................................................................................................................2550.20101000000000
.......................................................TACTC--TA-CGAGTAACG-------GGTATAACTAGA-------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.17202000000000
........................................................ACTC--TA-CGAGTAACG-------GGTATAACTAGA-------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08101000000000
droEre2
ATGCGG-------TGA----------------------------------------------------------------AGGTGGAGGACGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCTGCAGATCAC---CAGCGA------GCGG-------------------------------------------------AGGCCACGAGGTAGGCCGTATAAGCC------ACGG----------------CTGCAGC-----------------------------------------------------------------------------------------------------------------------------TGCAACAGCATCAGCTGCAGCCGCAG----------------------CAGAAGT--T---------------------------------------------------------------------------GCAAGT---GC--AGCAGCAGC----AGCAGCGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/15/2015 at 04:49 PM