ID:

dvi_2647

 Coordinate:

scaffold_12822:2984678-2984744 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_14159:3]; exon [dvir_GLEANR_14159:4]; CDS [Dvir\GJ14203-cds]; CDS [Dvir\GJ14203-cds]; intron [Dvir\GJ14203-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------##################################################
ATAGTAAAAGCTATTGGGCCAACATCTATGTGAATCCAACATTGCCTGTGGTAAGTTCAATTATTATTCAACACATATATTTATCTCTTCCTTTACTCACCACGGTTTTGGTTGCAGATGAAGGGCAGCATGCTCTGGGAGGCCAAAGATGAAAAAAATCAAAATCT
**************************************************................................................((((......)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M047
female body
 SRR060672
9x160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060666
160_males_carcasses_total
 M027
male body		 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060679
140x9_testes_total
 V053
head
 V047
embryo
 M028
head
..............................................................................................................................AGCATGCTCTGGGAGGCCAAAGAT................. 24 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AGCATGCTCTGGGAGGCCAAAG................... 22 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CAGCATGCTCTGGGAGGCCAAAGATGA............... 27 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
............ATTGGGCCAACATCTATGTGAATC................................................................................................................................... 24 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................GATGAAGGGCAGCATGCTCTGGGAGGC........................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AAAAGCTATTGGGCCAACAT.............................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATTGGGCCAACATCTATGTGA...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................GCAGCATGCTCTGGGAGGCC....................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............GGGCCAACATCTATGTGA...................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ATCTATGTGAATCCAACAT............................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TATTGGGCCAACATCTATGTGAATCCAA................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................TCTCTTCTTATACTCCCCACGG.............................................................. 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCATGCTCTGGGAGGCCACAGAT................. 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..AGTAAAAGCTATTGGGCCAAC................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................ATGAAGGGCAGCATGCTCTGGGAGGC........................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CAGCATGCTCTGGGAGGCCAAAG................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AGCATGCTCTGGGAGGCCAAAGA.................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....AAAAGCTATTGGGCCAACATCTATGT........................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GGCAGCATGCTCTGGGAGGC........................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TATTGGGCCAACATCTATGTGAATC................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................ATGAAGGGCAGCATGCTCTGGGAGGCC....................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CAACATCTATGTGAATCCAAC............................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GGCAGCATGCTCTGGGAGGCCAAA.................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GGCAGCATGCTCTGGGAGGCCAAAGA.................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GAAGGGCAGCATGCTCTGGGAA.......................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AAGGGCAGCATGCTCTGGGAGG......................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGGGCAGCATGCTCTGGGAGGC........................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AAGGGCAGCATGCTCTGGGAGGCCAAAG................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CAGCATGCTCTGGGAGGCCAAA.................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GGCAGCATGCTCTGGGAG.......................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GGGAGGCCAAAGATGAAAAAA.......... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGCAGCATGCTCTGGGAAGC........................ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................CAGCATGCTCTGGGAGGCCAAAGA.................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................CTATGTGAATCCAACATTGCCTGTGAT................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................ATGTGAATCCAACATTGCCTGT...................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATGCTCTGGGAGGCCAAAG................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................GAATCCAACATTGCCTGTGATG.................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGTAAAAGCTATTGGGCCAA................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GTGATGAAGGGCAGCATGCTCTGGGAG.......................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CAGCATGCTCTGGGCGGCCAAAGAT................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GCAGCATGCTCTGGAACGTCA...................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................TTCCTTTGATGACCACGGT............................................................. 19 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GTTGAAGGGCAGTATTCTC................................ 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................TCTGGGAGGGAAAAGATGT............... 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TATCATTTTCGATAACCCGGTTGTAGATACACTTAGGTTGTAACGGACACCATTCAAGTTAATAATAAGTTGTGTATATAAATAGAGAAGGAAATGAGTGGTGCCAAAACCAACGTCTACTTCCCGTCGTACGAGACCCTCCGGTTTCTACTTTTTTTAGTTTTAGA
**************************************************................................................((((......)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 M047
female body
 M027
male body		 M028
head
 SRR060667
160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 V116
male body		 SRR1106729
mixed whole adult body
 SRR060671
9x160_males_carcasses_total
 M061
embryo
 SRR060672
9x160_females_carcasses_total
 SRR060675
140x9_ovaries_total
 V053
head
...............................................CATGATTCAAGTTAATGATAA................................................................................................... 21 3 9 5.44 49 16 5 0 4 3 3 3 2 3 1 2 2 2 1 1 1 0 0 0 0 0 0
...............................................CATGATTCAAGTTAATGATA.................................................................................................... 20 3 20 2.20 44 8 7 0 2 3 3 3 5 1 4 1 0 0 1 1 1 0 1 1 0 1 1
................................................ATGATTCAAGTTAATGATAA................................................................................................... 20 3 20 1.30 26 10 3 0 2 3 2 0 0 0 1 1 1 1 0 0 0 0 1 0 1 0 0
................................................................................................................................GTACGAGACCCTCCGTCTTAT.................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................ATGATTCAAGTTAATGATA.................................................................................................... 19 3 20 0.15 3 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CGGTTGTAGATACAGT...................................................................................................................................... 16 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12822:2984628-2984794 - dvi_2647 ATAGTAAAAGCTATTGGGCCAACATCTATGTGAATCCAACATTGCCTGTGGTAAGTTCAATTATTA-------------------------------------------TTCA-ACACA---------------------------------------------------TATAT--TT---------A---------------------------------------------------------T-CT-CTTCCTTT-----------------------------------------------------AC--TC---------ACCAC------------GGTTTTGGTTGCAGATGAAGGGCAGCATGCTCTGGGAGGCCAAAGATGAAAAAAATCAAAATCT
droMoj3 scaffold_6540:7413466-7413648 + AAAGCAAAAGCTATTGGGCCAATATCTTCGTTAATTCAACATTACCCGTGGTATGTGCGATAATAATT-------------------------------AATTTAATTGG----------------AT---TATAATCCAAGAA-----TCTTTAT-----------T----------------------------------------------------------------------------------G-------------------------------------------------------------ACTT--TATT-C-C------------GTCTTGTAATTTGCTTACAGATGCGGGGCAGTATGCTATGGGAGGCTAAAGATGAAAACAATAAAAATCT
droGri2 scaffold_14906:4523785-4523954 - ATAGTAAAAGCTATTGGGCCAATATATATGTGAATCCAACGCTGCCAGTGGTAAGTTCAAGATCC-----ATGGCAATAGGCCACAAGAA-----------------------------------------------------------TCTC---------------------------------------------------------------------------------------------T-CTG--------------------------------------------------------------------------GT---TTATAA---TCGACCGACTTGCTTGCAGATGAGGGGCAGTATGCTCTGGGAGGCCAAGGATGAACACAATCAAAATCT
droWil2 scf2_1100000004902:5941108-5941277 - ATGAGAAAACCTATTGGGCAAATATATTTGTGAATGAAACCTTGCCAGTGGTAAGTATTTCAATTT------------------------------------------------GTTGT-----------------T-------GTCAAT--------------------------------------TAT-------------------------------------------------------ATTATA---GTG-------------------------A----------------------------GCTC-----CTTTTT---TTTTTA---------TTGAATACTTCAGATGAGCGGCAGTATGTTGTGGGAAGCCAAAGATGAGAGCAATCAGAATCT
dp5 2:14499018-14499196 + ATGGCAAGACCTATTGGGCCAATATTTTTGTGAACGAAACATTGCCGGTGGTAAGTAAAGATCACAATCCAATCTCATAATTCGCACGGA-----------------------------------------------------------TCATTAA-----------G-------AT------------------------------------------------------------------------AGT------------------------------------------------------------------TT--TTCTT---CC---------CTTCTCCCACCTTTCAGATGCGTGGCAGCATGCTGTGGGAGTCCAAGGATGAGTGCAATCAGAACCT
droPer2 scaffold_0:5922234-5922412 - ATGGCAAGACCTATTGGGCCAATATATTTGTGAACGAAACATTGCCGGTGGTAAGTAAAGATCACAATCCAATCTCATAATTCGCACGGA-----------------------------------------------------------TCATTAA-----------G-------GT------------------------------------------------------------------------AGT------------------------------------------------------------------TT--TTCTT---CC---------CTTCTCCCCCCTTTCAGATGCGTGGCAGCATGCTGTGGGAATCCAAGGATGAGTGCAATCAGAACCT
droAna3 scaffold_13340:22529881-22530050 - ACGGGAAGTCCTACTGGGCCAACATATTTGTGGACGAATCCCTGCCGGTGGTAAGTGTGGACATCA------------------------------------------------GGCCA-----------------G-------CTTAAT--------------------------------------TTT-------------------------------------------------------TATAGC---CCT-------------------------A----------------------------ATTC-----CTA---CCCATTCCC---------TCTGATCGATCAGATGCGCGGCAGCATGTTGTGGGAATCCAAGGATGCAACCGATCAGAACCT
droBip1 scf7180000396721:623665-623827 + ACGGAAAGTCGTACTGGGCCAACATATTTGTGAATGAAACCCTGCCAGTGGTAAGTGTGAGAAG---------------------------------------------TTCA-AGCCA---------------------------------------------------CCTCG--AT---------TTC-------------------------------------------------------C-CAG---CCCTA-----------------------------------------------------AT--TT---------CGCA--------------TTCCCTTCATCAGATGCGCGGCAGCATGTTGTGGGAATCCAAGGATGCAGACGATCAGAACCT
droKik1 scf7180000302778:379992-380053 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTATTGCAGATGAGGGGCAGCATGCTGTGGGAATCCAAGGATGCCAACAATCAGAACCT
droFic1 scf7180000453912:1133142-1133393 + ATGGCAAAGCGTATTGGGCCAACATCTTTGTAAACTCAACTCTTCCGGTGGTAAGTTTAGAACACATTCGATTG--------------------CAGCTATTTTTATAAG----------------AT---CATCTTTAA-----TAAA----------------------------ATATCGAAAATATAGTCAAATTAGGAATAAAAGTAATCTAATATCTATTTTTAAATAGAAATCTAAACTA-AGA-------------CC---------------------------------------------------------A-------------ACATTTTTCTCTGTGTTCCAGATGAAAGGAAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCT
droEle1 scf7180000491008:269097-269296 + ATGGAAAAGCTTACTGGGCCAACATCTTTGTTAATAAAACTCTTCCGGTGGTAAGTTCGTAACTCATT------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------TTTATTCATATATATTATATTAATAAGAACCATAAAAAAATGTAATAATTGTCTA--CGTC-A-------------TGTTTTTTCTCTGTGTTGCAGATGAAAGGGAGCATGCTGTGGGAATCCAAGGATGCAAACGATCAGAACCT
droRho1 scf7180000779477:43728-43931 + ATGGAAAAGCCTACTGGGCCAACGTATTTGTGAATAACACTCTTCCGGTGGTAAGTTAGATTCAT-------------------------------------------------GATTATATTTTGTTC-A--TAAACAATATA-----TGTATGTTTATTTTCCATT-AAGCAA--ATTTAAG--------------------------------------------------------------------AAA---------AC-----------------------------------------------------ATA-C-C------------TTTTTCTCTCTGTGTTGCAGATGAAAGGGAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCT
droBia1 scf7180000302136:315720-315843 + TAAGT----TTTATT-----------------------------------------------TAAA-------------------------------------------TTCA-GATTA---------------------------------------------------TATTT--TT---------T---------------------------------------------------------T-TA-AATTCTGTAACTAAC---------------------------------------------------------A-------C----AACTTTTCCCTCTGTGTTGCAGATGAAAGGCAGCATGCTGTGGGAATCCAAGGATGCAAGCGATCAGAACCT
droTak1 scf7180000414373:76815-76896 - ATGGCAAGGCATACTGGGCCAACGTCTATGTTAACGAAACTCTTCCGGTGGTAAGTTTAGAATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATAAATTCAAATA------
droEug1 scf7180000409798:423926-424122 - ATGGTAAGGCGTATTGGGCGAACATCTTCGTAAACGAAACTCTTCCGGTGGTAAGTTAAGAAGACATT----------GATCCTCAAGAA-----------CCTA------------AATGTCATTTTATGTACAATCTTAATA-----TTTT--------------------------------------------------------------------------------------------------T---TCA-------------------------A----------------------------ACTC-----C-A-------------CTATTTCCCTCTGTGTTACAGATGAAAGGCAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCT
dm3 chr3R:19966369-19966580 + GTGGAAAGGCCTATTGGGCCAATATCTTTGTGAACGAAACTTTGCCGGTGGTAAGTAAAGAACCC------TTACAATAAACTCTACAAATCACCA--------------TTAATA----------------------------------------------TTCATTCGTACAT--ATTCTTA--------------------------------------------------------------------ATTATATATTTTATATATATATAAT------------------------------------------------------------ATATTTCTCTCTGTGTTCCAGATGAAAGGTAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCT
droSim2 3r:19503600-19503798 + ATGGAAAGGCCTATTGGGCCAATATCTTTGTGAACGAAACTTTGCCGGTGGTAAGTAAATAACAT---------CAATAAACTGTATAAATCACCA--------------TTAATA----------------------------------------------TTCATTTATACAT--ATTTCGA--------------------------------------------------------------------ATTATATATTTAAC---------------------------------------------------------A-------------ATATTTCTCTCTGTGTTCCAGATGAAAGGCAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCT
droSec2 scaffold_0:20304190-20304390 + ATGGAAAGGCCTATTGGGCCAATATCTTTGTGAACGAAACTTTGCCGGTGGTAAGTAAATAACCC------TAACAATAAACTGTATATATCACAA--------------TTAATA----------------------------------------------TTCATT-AAACAT--ATTTCGA--------------------------------------------------------------------ATTATATATTTAAC---------------------------------------------------------A-------------ATATTTCTCTCTGTGTTCCAGATGAAAGGCAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCT
droYak3 3R:26536737-26536853 - TTATTAG----------AAATTTATATTTAT------------------------------------------------------------------------------------------------------------------TTAA----------------------------ATTTCATATATTTA-------------------------------------------------------T-TGA-------------AC---------------------------------------------------------A-------------TTATTTCTCTCTGTGTTCCAGATGAAGGGAAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCT
droEre2 scaffold_4820:8091520-8091708 - ATGAAAAGGCCTATTGGGCCAATGTCTTTGTGAACGAAACTCTGCCGGTGGTAAGTTAAGAACCCC-----TGGTAACAAACTCTATGGATCAGCA--------------GCAAGATCATGTGGTGTTCTG--T-------------------------------------------------------------------------------------------------------------------AA-------------AC---------------------------------------------------------A-------------ATATTTCTCTCTGTGTTCCAGATGAAAGGCAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATAGTAAAAGCTATTGGGCCAACATCTATGTGAATCCAACATTGCCTGTGGTAAGTTCAATTATTA-------------------------------------------TTCA-ACACA---------------------------------------------------TATAT--TT---------A---------------------------------------------------------T-CT-CTTCCTTT-----------------------------------------------------AC--TC---------ACCAC------------GGTTTTGGTTGCAGATGAAGGGCAGCATGCTCTGGGAGGCCAAAGATGAAAAAAATCAAAATCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGCTCTGGGAGGCCAAAGAT.................2413.003001000000000000000000000000000000000000000000000000000000000020
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGCTCTGGGAGGCCAAAG...................2212.002001000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAGCATGCTCTGGGAGGCCAAAGATGA...............2712.002000000000000000001000010000000000000000000000000000000000000000
............ATTGGGCCAACATCTATGTGAATC....................................................................................................................................................................................................................................................................................................................................................................................2412.002100000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAGGGCAGCATGCTCTGGGAGGC........................2712.002000000000000000000000000000000000000000000000000000000000000020
.....AAAAGCTATTGGGCCAACAT...............................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............ATTGGGCCAACATCTATGTGA.......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GCAGCATGCTCTGGGAGGCC.......................2011.001000000000000000000000010000000000000000000000000000000000000000
...............GGGCCAACATCTATGTGA.......................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......................ATCTATGTGAATCCAACAT..............................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........TATTGGGCCAACATCTATGTGAATCCAA.................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000010000000000000000000000000000000000000000000000
..AGTAAAAGCTATTGGGCCAAC.................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATGAAGGGCAGCATGCTCTGGGAGGC........................2611.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAGCATGCTCTGGGAGGCCAAAG...................2311.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGCTCTGGGAGGCCAAAGA..................2311.001000000000000001000000000000000000000000000000000000000000000000
.....AAAAGCTATTGGGCCAACATCTATGT.........................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGCTCTGGGAGGC........................2011.001000000000000000000000000000000000000000000000000000000000000010
...........TATTGGGCCAACATCTATGTGAATC....................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATGAAGGGCAGCATGCTCTGGGAGGCC.......................2711.001000000000000000000000000000000000000000000000000000000000000010
...................CAACATCTATGTGAATCCAAC................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGCTCTGGGAGGCCAAA....................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGCTCTGGGAGGCCAAAGA..................2611.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................GAAGGGCAGCATGCTCTGGGAA..........................2211.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAGGGCAGCATGCTCTGGGAGG.........................2211.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................AGGGCAGCATGCTCTGGGAGGC........................2211.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................AAGGGCAGCATGCTCTGGGAGGCCAAAG...................2811.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................CAGCATGCTCTGGGAGGCCAAA....................2211.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGCTCTGGGAG..........................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GGGAGGCCAAAGATGAAAAAA..........2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAGCATGCTCTGGGAGGCCAAAGA..................2411.001000000000000000000000000000100000000000000000000000000000000000
...........................ATGTGAATCCAACATTGCCTGT.......................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTCTGGGAGGCCAAAG...................1911.001000000000000000000010000000000000000000000000000000000000000000
..AGTAAAAGCTATTGGGCCAA..................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAAGCAAAAGCTATTGGGCCAATATCTTCGTTAATTCAACATTACCCGTGGTATGTGCGATAATAATT-------------------------------AATTTAATTGG----------------AT---TATAATCCAAGAA-----TCTTTAT-----------T----------------------------------------------------------------------------------G-------------------------------------------------------------ACTT--TATT-C-C------------GTCTTGTAATTTGCTTACAGATGCGGGGCAGTATGCTATGGGAGGCTAAAGATGAAAACAATAAAAATCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............ATTGGGCCAATATCTTCGTTAATTCAAC................................................................................................................................................................................................................................................................................................................................................................................2812.002100001
.AAGCAAAAGCTATTGGGCCAATATCTT............................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................................................................................................GTATGCTATGGGAGGCTAAAGATGAA..............2611.001100000
AAAGCAAAAGCTATTGGGCCAATATCTT............................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
............ATTGGGCCAATATCTTCGTTAATTC...................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AGTATGCTATGGGAGGCTAAAGAT.................2411.001100000
....................................................................................................................................................................................................................................................................................................................................................................................GCTATGGGAGGCTAAAGATGAAAAC...........2511.001000001
....................................................................................................................................................................................................................................................................................................................................................................................GCTATGGGAGGCTAAAGATGAAAACAAT........2811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................CTATGGGAGGCTAAAGATG................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................GCTATGGGAGGCTAAAGAT.................1911.001100000
.....AAAAGCTATTGGGCCAATATC..............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................CAATATCTTCGTTAATTCAAC................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AGTATGCTATGGGAGGCTAAAG...................2211.001100000
.........GCTATTGGGCCAATATCTTCGTTAATT....................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................................GCAGTATGCTATGGGAGGCTAAAGAT.................2611.001100000
............ATTGGGCCAATATCTTCGTT........................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................GTATGCTATGGGAGGCTAAAGAT.................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................GGGAGGCTAAAGATGAAAA............1911.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................ATGGGAGGCTAAAGATGA...............1811.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGAAAACAATAAAAATCT1911.001100000
AAAGCAAAAGCTATTGGGCCAAT.................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................CTATGGGAGGCTAAAGATGA...............2011.001100000
......AAAGCTATTGGGCCAATATC..............................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AGTATGCTATGGGAGGCT.......................1811.001100000
droGri2
ATAGTAAAAGCTATTGGGCCAATATATATGTGAATCCAACGCTGCCAGTGGTAAGTTCAAGATCC-----ATGGCAATAGGCCACAAGAA-----------------------------------------------------------TCTC---------------------------------------------------------------------------------------------T-CTG--------------------------------------------------------------------------GT---TTATAA---TCGACCGACTTGCTTGCAGATGAGGGGCAGTATGCTCTGGGAGGCCAAGGATGAACACAATCAAAATCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATGAGAAAACCTATTGGGCAAATATATTTGTGAATGAAACCTTGCCAGTGGTAAGTATTTCAATTT------------------------------------------------GTTGT-----------------T-------GTCAAT--------------------------------------TAT-------------------------------------------------------ATTATA---GTG-------------------------A----------------------------GCTC-----CTTTTT---TTTTTA---------TTGAATACTTCAGATGAGCGGCAGTATGTTGTGGGAAGCCAAAGATGAGAGCAATCAGAATCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................GTGAATGAAACCTTGCCAGT.......................................................................................................................................................................................................................................................................................................................................................................2012.00220000
................................................................................................................................................................................................................................................................................................................................................................................GTATGTTGTGGGAAGCCAAAG...................2112.00200110
.........................ATTTGTGAATGAAACCTTGCCAGT.......................................................................................................................................................................................................................................................................................................................................................................2412.00200200
.....................ATATATTTGTGAATGAAACCTTGCCAGT.......................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................AAAGATGAGAGCAATCAGAAT..2111.00100010
........................................................................................................................................................................................................................................................................................................................................................................GAGCGGCAGTATGTTGTGGGAA..........................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................GTATGTTGTGGGAAGCCAAAGAT.................2311.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................AGCCAAAGATGAGAGCAATCAGA....2311.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................AAGATGAGAGCAATCAGAAT..2011.00100010
..............................................................................................................................................................................................................................................................................................................................................................................CAGTATGTTGTGGGAAGC........................1811.00100010
.....................................................................................................................................................................................................................................................................................................................................................................GATGAGCGGCAGTATGTTGT...............................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................GGCAGTATGTTGTGGGAAGCC.......................2111.00100100
.....................................................................................................................................................................................................................................................................................................................................................................GATGAGCGGCAGTATGTTGTGGGAA..........................2511.00100100
................................................................................................................................................................................................................................................................................................................................................................................GTATGTTGTGGGAAGCCAAA....................2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................GATGAGCGGCAGTATGTTGTGGGA...........................2411.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................GATGAGAGCAATCAGAAT..1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................AGCCAAAGATGAGAGCAAT........1911.00100100
.....................................................................................................................................................................................................................................................................................................................................................................GATGAGCGGCAGTATGTTGTGGGAAGC........................2711.00100100
...................................................................................................................................................................................................................................................................................................................................................................................TGTTGTGGGAAGCCAAAGATGAG..............2311.00100010
........................................................................................................................................................................................................................................................................................................................................................................GAGCGGCAGTATGTTGTGGGAAGCCAA.....................2711.00101000
...............................................................................................................................................................................................................................................................................................................................................................................AGTATGTTGTGGGAAGCCA......................1911.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................AAGATGAGAGCAATCAGAA...1911.00100100
....................AATATATTTGTGAATGAAACCTTGC...........................................................................................................................................................................................................................................................................................................................................................................2511.00100010
dp5
ATGGCAAGACCTATTGGGCCAATATTTTTGTGAACGAAACATTGCCGGTGGTAAGTAAAGATCACAATCCAATCTCATAATTCGCACGGA-----------------------------------------------------------TCATTAA-----------G-------AT------------------------------------------------------------------------AGT------------------------------------------------------------------TT--TTCTT---CC---------CTTCTCCCACCTTTCAGATGCGTGGCAGCATGCTGTGGGAGTCCAAGGATGAGTGCAATCAGAACCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................GATGCGTGGCAGCATGCTGTGGGA...........................2417.0070510100000
.....................................................................................................................................................................................................................................................................................................................................................................GATGCGTGGCAGCATGCTGTGG.............................2213.0030300000000
...............................GAACGAAACATTGCCGGT.......................................................................................................................................................................................................................................................................................................................................................................1813.0030300000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGATGAGTGCAATCAGAAC..2513.0030120000000
...............................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATGAGTGCAATCAGAACCT2512.0020200000000
..........CTATTGGGCCAATATTTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................2112.0020110000000
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGCTGTGGGAGTC........................2012.0020200000000
...............................GAACGAAACATTGCCGGTG......................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAGTCCAAGGATGAGT.............2512.0020100100000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGGGAGTCCAAGGATGAGTG............2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................ATGCGTGGCAGCATGCTGTGGGA...........................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGCTGTGGGAGTCCAAGG...................2511.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGCTGTGGGAGTCCAAG....................2411.0010100000000
.........................TTTTGTGAACGAAACATTGCCGG........................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................CATGCTGTGGGAGTCCAAGGATGAGTG............2711.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................GATGCGTGGCAGCATGCTGTGGG............................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGGGAGTCCAAGGATGAGT.............2011.0010000100000
..........................TTTGTGAACGAAACATTGCCGGTG......................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGGGAGTCCAAGGATGAGTGCA..........2311.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGGATGAGTGCAATCAGAAC..2611.0010100000000
..........................TTTGTGAACGAAACATTGCCGGT.......................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAGTCCAAGG...................1911.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................ATGCGTGGCAGCATGCTGTGGG............................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGATGAGTGCAATCAG.....2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................TGCGTGGCAGCATGCTGTGGGAGT.........................2411.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAGTCCAAGGATGA...............2311.0010100000000
.................GCCAATATTTTTGTGAACGAA..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
...............................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATGAGTGCAATCA......1911.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATGAGTGCAATCAG.....2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGTGGGAGTCCAAGGATGAGT.............2211.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGATGAGTGCAATCAGAACCT2711.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTGCAATCAGAACCT1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................GATGCGTGGCAGCATGCTGTGGGAGT.........................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATGAGTGCAATCAGAAC..2311.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGCTGTGGGAGTCCAAG....................2111.0010100000000
.............................GTGAACGAAACATTGCCGGT.......................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
ATGGCAAGACCTATTGGGCCAATATATTTGTGAACGAAACATTGCCGGTGGTAAGTAAAGATCACAATCCAATCTCATAATTCGCACGGA-----------------------------------------------------------TCATTAA-----------G-------GT------------------------------------------------------------------------AGT------------------------------------------------------------------TT--TTCTT---CC---------CTTCTCCCCCCTTTCAGATGCGTGGCAGCATGCTGTGGGAATCCAAGGATGAGTGCAATCAGAACCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................GAACGAAACATTGCCGGTG......................................................................................................................................................................................................................................................................................................................................................................1913.003300000
..........................................................................................................................................................................................................................................................................................................................................................................................GGAATCCAAGGATGAGTG............1811.001010000
droAna3
ACGGGAAGTCCTACTGGGCCAACATATTTGTGGACGAATCCCTGCCGGTGGTAAGTGTGGACATCA------------------------------------------------GGCCA-----------------G-------CTTAAT--------------------------------------TTT-------------------------------------------------------TATAGC---CCT-------------------------A----------------------------ATTC-----CTA---CCCATTCCC---------TCTGATCGATCAGATGCGCGGCAGCATGTTGTGGGAATCCAAGGATGCAACCGATCAGAACCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................GATGCGCGGCAGCATGTTGTGGGA...........................2414.004000040
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGTTGTGGGAATCCAAGGATG................2512.002100010
....................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGGAATCCAAGGATG................2012.002000020
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCAACCGATCA......2111.001000010
..................CCAACATATTTGTGGACGAATCCCTGCC..........................................................................................................................................................................................................................................................................................................................................................................2811.001010000
......................................................................................................................................................................................................................................................................................................................................................................ATGCGCGGCAGCATGTTGTGGGA...........................2311.001000001
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGTTGTGGGAATCCAAG....................2111.001000010
....................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGGAATCCAAGGATGC...............2111.001000010
.........CCTACTGGGCCAACATATTTGTGGAC.....................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGTTGTGGGAATCCAA.....................2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................GCGCGGCAGCATGTTGTGGGA...........................2111.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGCAACCGATCAGAACCT1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................GGCAGCATGTTGTGGGAATCCAAGG...................2511.001100000
droBip1
ACGGAAAGTCGTACTGGGCCAACATATTTGTGAATGAAACCCTGCCAGTGGTAAGTGTGAGAAG---------------------------------------------TTCA-AGCCA---------------------------------------------------CCTCG--AT---------TTC-------------------------------------------------------C-CAG---CCCTA-----------------------------------------------------AT--TT---------CGCA--------------TTCCCTTCATCAGATGCGCGGCAGCATGTTGTGGGAATCCAAGGATGCAGACGATCAGAACCTSizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTATTGCAGATGAGGGGCAGCATGCTGTGGGAATCCAAGGATGCCAACAATCAGAACCTSizeHit CountTotal NormTotal
No Reads
droFic1
ATGGCAAAGCGTATTGGGCCAACATCTTTGTAAACTCAACTCTTCCGGTGGTAAGTTTAGAACACATTCGATTG--------------------CAGCTATTTTTATAAG----------------AT---CATCTTTAA-----TAAA----------------------------ATATCGAAAATATAGTCAAATTAGGAATAAAAGTAATCTAATATCTATTTTTAAATAGAAATCTAAACTA-AGA-------------CC---------------------------------------------------------A-------------ACATTTTTCTCTGTGTTCCAGATGAAAGGAAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotal
No Reads
droEle1
ATGGAAAAGCTTACTGGGCCAACATCTTTGTTAATAAAACTCTTCCGGTGGTAAGTTCGTAACTCATT------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------TTTATTCATATATATTATATTAATAAGAACCATAAAAAAATGTAATAATTGTCTA--CGTC-A-------------TGTTTTTTCTCTGTGTTGCAGATGAAAGGGAGCATGCTGTGGGAATCCAAGGATGCAAACGATCAGAACCTSizeHit CountTotal NormTotal
No Reads
droRho1
ATGGAAAAGCCTACTGGGCCAACGTATTTGTGAATAACACTCTTCCGGTGGTAAGTTAGATTCAT-------------------------------------------------GATTATATTTTGTTC-A--TAAACAATATA-----TGTATGTTTATTTTCCATT-AAGCAA--ATTTAAG--------------------------------------------------------------------AAA---------AC-----------------------------------------------------ATA-C-C------------TTTTTCTCTCTGTGTTGCAGATGAAAGGGAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotal
No Reads
droBia1
TAAGT----TTTATT-----------------------------------------------TAAA-------------------------------------------TTCA-GATTA---------------------------------------------------TATTT--TT---------T---------------------------------------------------------T-TA-AATTCTGTAACTAAC---------------------------------------------------------A-------C----AACTTTTCCCTCTGTGTTGCAGATGAAAGGCAGCATGCTGTGGGAATCCAAGGATGCAAGCGATCAGAACCTSizeHit CountTotal NormTotal
No Reads
droTak1
ATGGCAAGGCATACTGGGCCAACGTCTATGTTAACGAAACTCTTCCGGTGGTAAGTTTAGAATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATAAATTCAAATA------SizeHit CountTotal NormTotal
No Reads
droEug1
ATGGTAAGGCGTATTGGGCGAACATCTTCGTAAACGAAACTCTTCCGGTGGTAAGTTAAGAAGACATT----------GATCCTCAAGAA-----------CCTA------------AATGTCATTTTATGTACAATCTTAATA-----TTTT--------------------------------------------------------------------------------------------------T---TCA-------------------------A----------------------------ACTC-----C-A-------------CTATTTCCCTCTGTGTTACAGATGAAAGGCAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotal
No Reads
dm3
GTGGAAAGGCCTATTGGGCCAATATCTTTGTGAACGAAACTTTGCCGGTGGTAAGTAAAGAACCC------TTACAATAAACTCTACAAATCACCA--------------TTAATA----------------------------------------------TTCATTCGTACAT--ATTCTTA--------------------------------------------------------------------ATTATATATTTTATATATATATAAT------------------------------------------------------------ATATTTCTCTCTGTGTTCCAGATGAAAGGTAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................TAGCATGTTGTGGGAATCCAAGGA..................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACGATCAGAACC.2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TATCTTTGTGAACGAAACTTTGCCGGT.......................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTGTGGGAATCCAAGGATGCGAAC...........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........TATTGGGCCAATATCTTTGTGAACGAAAC................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGAAAGGTAGCATGTTGTGGGAATC........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TCCAAGGATGCGAACGATCAGAACC.2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAAGGTAGCATGTTGT...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGGGAATCCAAGGATGC...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAAGGTAGCATGTTGTGGGAATCCAA.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........CTATTGGGCCAATATCTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATGCGAACGATCAGT....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGTTGTGGGAATCCAAGGATGC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........CCTATTGGGCCAATATCTTT...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGGTAGCATGTTGTGGGAATCCAAG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGGGCCAATATCTTTGTGAACGAAACTTT.............................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGGAATCCAAGGATGCGAAC...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGGAATCCAAGG...................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GAAAGGTAGCATGTTGTGGGA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGCGAACGATCAGAACCT1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGGGAATCCAAGGATGCGAACG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTGTGGGAATCCAAGGATGCGAACGAT........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCAATATCTTTGTGAACGAAACTT..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AGGATGCGAACGATCAGAAC..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................GGTAGCATGTTGTGGGA...........................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAAGGTAGCATGTTGTGG.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATGCGAACGATCAGAACCT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAGGATGCGAACGATCAGAACCT2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................TGAACGAAACTTTGCCGGTGA.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GGTAGCATGTTGTGGGAATCCAAGGAT.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTGTGGGAATCCAAGGATGCGAACGA.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGTTGTGGGAATCCAAGG...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTTGTGAACGAAACTTTGCCGGTGA.....................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
GTGGAAAGGCCTATTGGG......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGTGGGAATCCAAGGATGC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................AGGTAGCATGTTGTGGGAATCCAAGG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................ATGTTGTGGGAATCCAAGGAT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATATCTTTGTGAACGAAACTTTGCCGG........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACG..........1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAAGGTAGCATGTTGTGGGAA..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCTTTGTGAACGAAACTTTGCCGGTGA.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCTTTGTGAACGAAACTTTGCCGGT.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TCCAAGGATGCGAACGAT........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TATCTTTGTGAACGAAACTTTGCCGG........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCTTTGTGAACGAAACTTT.............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTATATATTTTATATATATA.......................................................................................................................................2070.7150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100100000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTATATATTTTATATATATAT......................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATGGAAAGGCCTATTGGGCCAATATCTTTGTGAACGAAACTTTGCCGGTGGTAAGTAAATAACAT---------CAATAAACTGTATAAATCACCA--------------TTAATA----------------------------------------------TTCATTTATACAT--ATTTCGA--------------------------------------------------------------------ATTATATATTTAAC---------------------------------------------------------A-------------ATATTTCTCTCTGTGTTCCAGATGAAAGGCAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........CTATTGGGCCAATATCTTTGTGAACGA...................................................................................................................................................................................................................................................................................................................................................................................2713.00303000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACGATCAGAAC..2512.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGTGGGAATCCAAGGATGCGAACGAT........2611.00100000010000000000
........................TCTTTGTGAACGAAACTTTGCCGGTGA.....................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........CTATTGGGCCAATATCTTTGTGA.......................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..............TGGGCCAATATCTTTGTGAACGAAAC................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAATCCAAGG...................1911.00100000000000100000
..........CTATTGGGCCAATATCTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
........................TCTTTGTGAACGAAACTTTGCCGGTG......................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACGATC.......2011.00101000000000000000
..............TGGGCCAATATCTTTGTGAACGAAA.................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................AATCCAAGGATGCGAACGATC.......2111.00101000000000000000
..........CTATTGGGCCAATATCTTTGTGAAC.....................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACGATCA......2111.00100010000000000000
droSec2
ATGGAAAGGCCTATTGGGCCAATATCTTTGTGAACGAAACTTTGCCGGTGGTAAGTAAATAACCC------TAACAATAAACTGTATATATCACAA--------------TTAATA----------------------------------------------TTCATT-AAACAT--ATTTCGA--------------------------------------------------------------------ATTATATATTTAAC---------------------------------------------------------A-------------ATATTTCTCTCTGTGTTCCAGATGAAAGGCAGCATGTTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................ATGTTGTGGGAATCCAAGG...................1917.0071240
..................................................................................................................................................................................................................................................................................................................................................................................ATGTTGTGGGAATCCAAGGAT.................2113.0030300
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAAGGCAGCATGTTGTGGGA...........................2412.0020110
........................................................................................................................................................................................................................................................................................................................................................................GAAAGGCAGCATGTTGTGGGA...........................2112.0020020
..........CTATTGGGCCAATATCTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................2112.0020110
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACGATCA......2111.0010100
.............................GTGAACGAAACTTTGCCG.........................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........CTATTGGGCCAATATCTTTGTGAACG....................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
............................................................................................................................................................................................................................................................................................................................................................................................AATCCAAGGATGCGAACGATCAGAAC..2611.0010100
.................................................................................................................................................................................................................................................................................................................................................................................CATGTTGTGGGAATCCAAGGAT.................2211.0011000
............ATTGGGCCAATATCTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................GCATGTTGTGGGAATCCAAGG...................2111.0010100
........................................................................................................................................................................................................................................................................................................................................................................GAAAGGCAGCATGTTGTGGGAATCCAAG....................2811.0010100
....................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGGAATCCAAGGATGC...............2111.0010100
..................CCAATATCTTTGTGAACGAAA.................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................................................................................................................................................................................................ATGTTGTGGGAATCCAAGGATGC...............2311.0011000
............................TGTGAACGAAACTTTGCCGGT.......................................................................................................................................................................................................................................................................................................................................................................2111.0010010
droYak3
TTATTAG----------AAATTTATATTTAT------------------------------------------------------------------------------------------------------------------TTAA----------------------------ATTTCATATATTTA-------------------------------------------------------T-TGA-------------AC---------------------------------------------------------A-------------TTATTTCTCTCTGTGTTCCAGATGAAGGGAAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................ATGAAGGGAAGCATGCTGTGGG............................2213.00300000030000
........................................................................................................................................................................................................................................................................................................................................................................GAAGGGAAGCATGCTGTGGGA...........................2112.00201000010000
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAGGGAAGCATGCTGTGGGA...........................2412.00200000020000
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGCTGTGGGAATCCAAGGAT.................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................GGAAGCATGCTGTGGGAATCCAAGG...................2511.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................AGGGAAGCATGCTGTGGGAATCCAA.....................2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACGATCAGAAC..2511.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................GCTGTGGGAATCCAAGGATGCGAAC...........2511.00110000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAGGGAAGCATGCTGTGGGAATCCAAGG...................2811.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................CATGCTGTGGGAATCCAAG....................1911.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................AATCCAAGGATGCGAACGATCA......2211.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................AATCCAAGGATGCGAACGATCAGA....2411.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................CATGCTGTGGGAATCCAAGG...................2011.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................AGGGAAGCATGCTGTGGGAATCCAAGG...................2711.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGCGAACGATCAGAACCT1911.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................GAAGGGAAGCATGCTGTG..............................1811.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................GCATGCTGTGGGAATCCAAGGATGC...............2511.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................GCATGCTGTGGGAATCCAAGGATG................2411.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................GAAGGGAAGCATGCTGTGG.............................1911.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAGGGAAGCATGCTGT...............................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................GAAGCATGCTGTGGGAATCCAAGGAT.................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAATCCAAGG...................1911.00100000010000
droEre2
ATGAAAAGGCCTATTGGGCCAATGTCTTTGTGAACGAAACTCTGCCGGTGGTAAGTTAAGAACCCC-----TGGTAACAAACTCTATGGATCAGCA--------------GCAAGATCATGTGGTGTTCTG--T-------------------------------------------------------------------------------------------------------------------AA-------------AC---------------------------------------------------------A-------------ATATTTCTCTCTGTGTTCCAGATGAAAGGCAGCATGCTGTGGGAATCCAAGGATGCGAACGATCAGAACCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAATCCAAGG...................19113.00133100720
........................................................................................................................................................................................................................................................................................................................................................................GAAAGGCAGCATGCTGTGGGA...........................2114.0040000400
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGCTGTGGGAATCCAAGG...................2214.0040000400
.................................................................................................................................................................................................................................................................................................................................................................................CATGCTGTGGGAATCCAAGG...................2013.0030000120
....................................................................................................................................................................................................................................................................................................................................................................................GCTGTGGGAATCCAAGGATGC...............2112.0021000100
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAAGGCAGCATGCTGTGGGA...........................2412.0020000200
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAATCCAAGGATGCGAAC...........2712.0020100100
........................................................................................................................................................................................................................................................................................................................................................................GAAAGGCAGCATGCTGTGGG............................2011.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGTGGGAATCCAAGGATGCGAAC...........2611.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................TGCTGTGGGAATCCAAGG...................1811.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGGATGCGAACGATC.......2011.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................AGCATGCTGTGGGAATCCAAG....................2111.0010001000
..........CTATTGGGCCAATGTCTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
................................................................................................................................................................................................................................................................................................................................................................................GCATGCTGTGGGAATCCAAG....................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................................................GAAAGGCAGCATGCTGTGGGAA..........................2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAATCCAAG....................1811.0010000100
..........CTATTGGGCCAATGTCTTTGTGAAC.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................GATGAAAGGCAGCATGCTGTGG.............................2211.0010000100
............ATTGGGCCAATGTCTTTGTGAACGAA..................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................AGGCAGCATGCTGTGGGA...........................1811.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................AATCCAAGGATGCGAACGATC.......2111.0010000100
..............................................................................AAACTCTATGGATCAGCA--------------GCAAGATC..................................................................................................................................................................................................................................................................................................2611.0011000000
........................................................................................................................................................................................................................................................................................................................................................................GAAAGGCAGCATGCTGTGGGAATCCAAG....................2811.0011000000
..................CCAATGTCTTTGTGAACGA...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTGGGAATCCAAGGATG................2211.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................CATGCTGTGGGAATCCAAGT...................2011.0010001000
..........CTATTGGGCCAATGTCTTTGTGAACGAA..................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100

Generated: 05/16/2015 at 08:22 PM