ID:

dvi_2625

 Coordinate:

scaffold_12822:2852126-2852302 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.1 -36.1 -36.0

Flybase annnotation

exon [dvir_GLEANR_14465:11]; CDS [Dvir\GJ14521-cds]; exon [dvir_GLEANR_14465:10]; CDS [Dvir\GJ14521-cds]; intron [Dvir\GJ14521-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
TART_DVLINEJockey+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGATGTGACAACGGCCACGCCGGATCTCTATAGCAAAATATGCAGCAATGGTAATGTCATACACCAACAACAACAACAGCAACAGTTGCTGCTGGCACAGCAGCAACAACAGCTGCTGCAGCTGCAAATGCAACACGAAACACAACAGCTACAACAGCAACAACAACAATCGCAGACGCAGCAGCAGCACACACAGTCAAATCTCATTAGTCATAGTCATGCAACAGCAACAATAACTGAAACAACAAATGCAACTGCAACAAATGCAACAACAAAC
*********************************************************...........................((((((((((...))))))))))....((((((((..((((..............................................))))..)))))))).******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 SRR060665
9_females_carcasses_total
 V053
head
 SRR060672
9x160_females_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 SRR060659
Argentina_testes_total
 SRR060668
160x9_males_carcasses_total
 M061
embryo
 SRR060686
Argx9_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 V116
male body
........................................................................................................................................................................ATCGCAGACGCAGCAGCA........................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ACAATCGCAGACGCAGCAGC............................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CAACGGCCACGCCGGATCTCTA....................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CATACACCAACAACAACAACAG...................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........CAACGGCCACGCCGGATCTCT........................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CAACAATCGCAGACGCAGCAGT............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCACAACCGCCACGACGGATC........................................................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CAACAAATGCAACTGCAACAA.............. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCGCAGACGCAGCAGCAGCAC....................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................AGCAATGGTAATGTCATAC....................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AACAGCAACAATCGCAGACG................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................GCAAAATATGCAGCAGTGGTA................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CGGCAACAACAATCGCAGACG................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CAATCGCAGACGCAGCAGCGG.......................................................................................... 21 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................CAATGGTAATGGCATACTC..................................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................GCAACAGTTGCTGCTGGC..................................................................................................................................................................................... 18 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................ACAACAACAACAGCAACAGTT.............................................................................................................................................................................................. 21 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................CAACAACAACAGCAACAGTTG............................................................................................................................................................................................. 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................CAACAACAACAGCAACAGTT.............................................................................................................................................................................................. 20 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................AACAACAACAGCAACAGTT.............................................................................................................................................................................................. 19 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................ACACCAACAAAAACAACAG...................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CCAACAACAACAACAGCAAC.................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................CAACAACAGCAACAGTTG............................................................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TACAACAGCAACAACAACA............................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................CAACAACAGCTGCAGCAGCT.......................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AACAACAACAACAGCAACAG................................................................................................................................................................................................ 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TACAACAGCAACAACAACAA............................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................CAACAACAACAGCAACAGT............................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................CAACAACAACAACAGCAACAG................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................CAACAACAACAACAGCGACAGT............................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................CTACAACAGCAACAACAACA............................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CCTACACTGTTGCCGGTGCGGCCTAGAGATATCGTTTTATACGTCGTTACCATTACAGTATGTGGTTGTTGTTGTTGTCGTTGTCAACGACGACCGTGTCGTCGTTGTTGTCGACGACGTCGACGTTTACGTTGTGCTTTGTGTTGTCGATGTTGTCGTTGTTGTTGTTAGCGTCTGCGTCGTCGTCGTGTGTGTCAGTTTAGAGTAATCAGTATCAGTACGTTGTCGTTGTTATTGACTTTGTTGTTTACGTTGACGTTGTTTACGTTGTTGTTTG
*******************************************************************************************...........................((((((((((...))))))))))....((((((((..((((..............................................))))..)))))))).********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060681
Argx9_testes_total
 V116
male body		 M027
male body		 SRR060666
160_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060667
160_females_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060671
9x160_males_carcasses_total
 V053
head
 M061
embryo
 SRR060662
9x160_0-2h_embryos_total
...........GCCGGTGCGGCCTAGAGATAT..................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGTCGTGTGTGTCAGTTTAGA......................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GTCGTTGTTGTTGTTAGCGTC...................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTTATTGACTTTGTTGTTT............................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ACGACGTCGACGTTTACGTT................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTATGTGGTTGTTGTTGTTGT....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................CGTTACAGTATGTGGTTGTTG.............................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GTACGTTGTCGTTGTTATTG........................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TGTGCTTTGTGTTGTCGATGT............................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TCCGGTGCGGCCTAGAGATATC.................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CGACGTTTACGTTGTGCTTTG........................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTGTGTCAGTTTAGAGTAA..................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................GATATCGTTTTATACGTCGTT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GACGACGTCGACGTTTACGT................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTCGTGTGTGTCAGTTTAGA......................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGTGTGTGTCAGTTTAGAGTGA..................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CAGTATCAGTACGTTGTCG................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GTGTGTGTCAGTTTAGAGT....................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CGGTGCGGCCTAGAGATATCG................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................CCTAGAGGTGTCGTTTTATAC........................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................ACGTCGTTACCGTTACAGTGT........................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GTTGTTAGCGTCTGCGTCGTC............................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............GTGCGGCCTAGAGATATCGTT................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CTGTTATTGACTTTGTTGTT............................. 20 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............TTTCGGCCTAGAGATATCGT.................................................................................................................................................................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................................GTCGTTGCTATGGACTTGGTTG............................... 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TACGTTGTCGTTGCTACTGACC..................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................TGATGTTTACGTTGCCGTT................. 19 2 20 0.15 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
.............................................................................................................................................................................................GAGTGTCAGTCTAGAGTA...................................................................... 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATGTTGTCGCTGTTACTGACT..................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................ACTTCAGTATGTGGTTGTTA.............................................................................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................TTTGATGTTTACGTTGCCG................... 19 2 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTATGTGGTTGTTGTTGTTGT....................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................TGGTTGTTGTTGTTGTCGTT................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTGATGTTTACGTTGCCGTT................. 20 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GACGTTGTCGTTGTTACTGACC..................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12822:2852076-2852352 + dvi_2625 GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATATGCAGCAATGGTAATGTCA-----------------------------TACAC------------------------------------------------CA---ACA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAGT-----TGCTGCTGGCACAGC-------------------------------------AG-------CAACAA---------------CAG----CTGCTGCAGC------------------------------------------------TGCAAATGCAACACGAAAC---------------------------------------ACAACAGCTACAACAGCAA---------------------------------------------------------CAA---------------------CAACAATCGCAGACGC-AGCAGCAGCA---CAC-------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAG---TCAAATCTCATTAGTCATAGTCATGCAACAGCAACAAT------------------------------AACT---GA---------------------------------------------------------AACAA--CAAATGCAACTGC----------AACAAATG---CAACAACAAAC
droMoj3 scaffold_6540:26783199-26783499 + GGATGTGACATCGGGCACGCCAGATCTATACAGCA--AAAATTTGCAGCAATGGTAATATTA-----------------------------TGCACCAACTACA---A---------------------------------------------------------------------------------------------------------------------------------------------CA------A---CAACAACAGCACCAGC-----TGTTGCTTGCACAGC-------------------------------------AG-------CAGCAG---------------CAG----ATGCTGCAGC------------------------------------------------TGCAGATGCAACATGAGACACAACTACAGCTTCAGCAACAACAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC--------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------------------------TCAAATATCATTAGTCATCGTCATACAACGACAACAACAGATAGTGATATAACAAATGAAGCATTTGCAAAGGCAACTG------------------------------------------------C------AAC--AGCCACAGTAGCAGC----------AGCAGCAG---CAGCAACAAC-
droGri2 scaffold_14624:3600447-3600747 + dgr_84 GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATTTGCAGCAACGGTAATGTTA-----------------------------CACTCC------------------------------------------------------------------------------------------AACAACAT------------------------------CAACAA------------------CA------A---CAACAACAGCAGCAGC-----TGTTGCT------GC-------------------------------------AA-------CAACAG---------------CAT----CTGCTGCAGC------------------------------------------------TGCAAATGCAACATGAAAC---------------------------------------AC---------------------------------AACA------------------------------------ACAACT---ACAACAGCTACAG---------C----------------------------T-----------------------------------------------------------------ACAACAGCAACAAC--------------------------------AACAACAACAG------------------CAAC---AGCAG----CTACAGCAGCAGCAGCAGCAGCAAACACAGCAAACAAATCTCATTAGTCATAGTCAT------------------------C-------------------------------------------------------------------------------A---TCA-------AACAGAAGCAGC----------TGTTGCAA---CAGACACAGAC
droWil2 scf2_1100000003625:570-839 + ACA----ACAGCAGCAACG---AA-CGCAACA---------------------------------------------------------------------------G------------------------------------------CAACAGCA------ACAGCAGCAACAATTGCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAGCAA------------------CAATGGCAGCAACAACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------AACAACAACAGCAGCAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---ACAA------------CAGCATCAGCAACAGCAA----CAGCAGCAACGAAT---------GCAACAGCA-----------------A------------------CAGCAACAG---------------------------CAA---CA--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGCAAC------------------------------AATT---GCAG------------------------------------------------CA---ACAAC--AGCAACAGCAGCAAC----------AATGGCAG---CAACAACAACA
dp5 2:2170436-2170695 + GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATATGCAGCAATGGTAATGTT-CCCCAGCATATCATACTCCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---CAGC-----AGCT--------------------------------------------------GCTGC----------------------------------AGCAACAGCAATACCAACAACATC------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAACAGTTGCAGCTACAGCT---------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGCAGCCA-----------CTAGCACTCGCACAAGCACAGCCA------------CAACCACAAACACAAATA-------------------------------------CAG---ACCA--CTCG-TAGTCATAGT------------------------GAACT--------------------------------------------------------------------------------------------AAATGAGACAGC----------ATCCAATA---CACC--CTCCA
droPer2 scaffold_7:2338039-2338294 + GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATATGCAGCAATGGTAATGTT-CCCCAGCATATCATACTCCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---CAGC-----AGCT--------------------------------------------------GCTGC----------------------------------ACCAACAGCAATACCAACAACATC------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAACAGTTGCAGCTACAGCT---------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGCAGCCA-----------CTAGCACTCGCACAAGCACAGCCACAGCCACAACCACAACCACAAACACAAATA-------------------------------------CAG---ACCA--CTCG-TAGTCATAGT------------------------GAACT------------------------------------------------------------------------------------------------------------------------AA---ATGAGACAGCA
droAna3 scaffold_13337:19297527-19297767 - CAACG-----GCAACAGGA---A----------------------CTGCA---------------------------------------------------------A------------------------------------CG---GCCACAGCA------ACAGCAACTACAACT------GGAACAGCA---------------------------------------------------------------A------CAGCAACAG-----------CAACTG-----------------------------------------------------------------------------CAAC-------AGC------------------------AAC---TACAACTGCAACAGCAACTACA------------------------------------------------------------------AGTGCAACAGCAACTTC---A---------------------ACTCCAACAGCA---------ACAACA---ATTA-------------------------------------CAA-----------------------------------------------------------CAGAAA------CTAGAACAGCAACAGCAA------CTTAAATT--------------------------A------------------CAAC--------------------------------------------------------------------------AGCAGCTAG------------------------------AACA---GCAA------------------------------------------------CA---GCAAT--TACAACAGCAGCTAG----------AACAACAA---CAACAGCTAC-
droBip1 scf7180000395839:161742-162005 - GGATGCGG--GCGGCC-TGCCAGTCTTCCAGAGCGCCA-GCCAAGCAGCC--------GTCG-----------------------------CACAG------CAGCAGCAACAACAGCAG------------------------CAGCAGCA---------------------------------GC------------------------------------------------------------AAC------------------AACAACATT-----------TG------------AATCTTCAGTTGCATCAGCAGCACTTGGGCCT--T------------------------------CATC----TGCAACAGCAACAGCAGCTGCAACTTCAGCAGC---AG---------------------------------------------------------------------------------------CAGCAG------CAACATAATGCACAGG------------------------C---------GCA----------------------------------------ACAGCAGCAG-----------------------CAGATC------------------------------------------------------------------CAA-----------------------------------------------------G-----------------------------------------------------------------------------------------------------------------TGCA---GCAG------------------------------------------------CA---GCAGCAA--CAACAACAACAGC----------AGCAGCAA---CAACAACAACA
droKik1 scf7180000302344:1389416-1389689 + GGCTGCAACAGCTACCACAGCTG-------------------------CA---------------------------------------------------------A------------------------------------------CAGCAACA------GCAG---CAACAGCTAAAGCTACAACAGCTGCAAA---------------------------------------------------------------------AG--------------CAGCAA------------------AAAAGACGGCTACAACA-----------GCAGCAACGGTGGCAACAGCTACAACTGCAGCTGC----AGT---------------------------GGTATAAA---------------------C---------------------------------------------------AGC---------------------------------CACA------------------------------------GAA---ACTGCAACAGT---TA---------C---AACAA-CAGGTACAACAA------------CTACACCAGCA-----------------G------------------CAGCTCCACCAA------------------------CTCATACA--------------------------G------------------CAGC--------------------------------------------------------------------------AGCTACAAA------------------------------AACT---GCAA------------------------------------------------CA---ACAAG--TGCTACAACAACTGC----------AACAGGTG---CAGCTACAGCA
droFic1 scf7180000453438:40323-40610 - TGTGGCAACTACAACGACAACA-------------------------------------------------------------------------------------GCAGGATCAGCAGAAAGATGACCAGCAG---------CA---ACC---------------------------------------------------------------------------------------------------------ACAGCAAC---AGCAACAATTCAAGAGCAGCTGGGAGAACTCCTAA-------------------------------AG-------CAACAG------------CAGCAGC-------AACAGC------------------------AGC---AAACACAGCAACGACAACAACA------------------------------------------------------------------AT------------------TGCAACAGCAACTGTGGCAACTACAACGACAACC---------ACA----------------------------------------GCAACAGCAA-----------------------CAAATTCAAG------AG------------------CAGCTAAGAGAA------------------------CTCCTCAA--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGCAAA------------------------------CACA---GCAA------------------------------------------------CG---ACAACAA--CAATTGCAACAGC----------AACTGTGG---CAACTACAACC
droEle1 scf7180000491212:284928-285203 + CAA--------CAGCAACACCTG----------------------CACCAGCA------------------------------------------------------G------------------------------------------CAACATCA------GCAC---CAACAGC---------------------------------------------------------------------AACATCAACAA---CACCAACAGCAA-----------CATCAA-----------------------------------------------------------------------------CAAC-------ACC------------------------AGC---ACCAGCACCAACACCAACAGCA------------------------------------------------------------------GTCGCAGCAGCAACATC---A---------------------------------------------------------------------------------------------------------------------------------------------------------------G------CAACACCAGCAGCATCAGCAACACCAGC--------------AACACCAGCAACACCAG------------------CAAC--------------------------------------------------------------------------ATCAGCAAC------------------------------ATCT---GCAGCAACAGGCCAACTTTCTCCACATCCAGCAATCGCTGCAGCATAACCACCAGCTGAGCCAC--CCAGAACCAATCC----------ATCAGATG---CCCCA-----A
droRho1 scf7180000777882:8236-8507 - GTG----ACAACA-CTACACCA-------------------------------------------------------------------------------------GCAA---------------------------------------CAT------------------------------------------------------------------------CAACAGCTACAACAGCAGCAGCAACA------ACAGCAGC---AA--------------CAACAA------------------CAGCTTC------------------------------------------------------------AACAGCAGCAATACCAGCAACAAC---------------TGCAGCAGC---------------------------------------AACAACAACTGCAGCAGCA------------------------------GCAAC---AACAACA------------------------------------ACA---TCAA------------CACCAACACTATCTGCAA----CAGCAGCAACAAAC---CCTGCC-------------------------------------------------------------------------------------------------------------A------------CCGCCTCCAATACAACATCAGCAATACAACAC----------------------------------------------------------AGCGGCTAT------------------------------AACG---CCCA------------------------------------------------CA---T-ACCAA--CAACTCCAACAGC----------AACAACAA---CAGCAGCAACA
droBia1 scf7180000302113:2271390-2271659 + GCA----GCAGCAGCAACGTCTG----------------------TGGCAGCA------------------------------------------------------G---------------------------------------------CAACA------CCAG---CAACTGTAGGAGC---------------------------------------------------------------AACATCAGCAA---CAGCAACAACAACAAC-----------TG-----------------------------------------------TAGCAGCA-------------------------------------------------ACAGC---------------AGCAGCAAC---------------------------------------ACCAACAACTGTAGGAGCA------------------------------ACATC---AGCAACAGC------------------------------------A---ACAA------------CAACAACTGTAGCAGCAA----CAGCAGCAGCGATA---TCAACAACTGTAGCA-----G------------------------------CAACAGCAGCAG------------------------C-----------------------------------------------------GAT--------------------------------------------------------------------------ATCAACAAC------------------------------TGTA---GCAG---------------------------------------CAGCAGCAACA---ACCGA--GGGAGCAACAACAGC----------AACACTTG---CAGCGGCAACA
droTak1 scf7180000415192:82728-83019 - GGCAGCAACAACCACTACAGCAG----------------------------CA------------------------------------------------------A------------------------------------------CCACTAAG------GCAG---CAACAGCTACGGTAGCAACAACCACAGT---------------------------------------------------------------------CG--------------CAACAA------------------CCAAGGCAGCAACAACC-----------ACAGCGGCGACAACCAAGGCAGCAACAACAACCAC----TGC---------------------------AGCAACAA---------------------C---------------------------------------------------CAC---------------------------------AGCG------------------------------------GCA---ACTACTAAGGC------------TGCAACAACAA----CCACCGCAGCAACA---ACAACC--------------------------A------------------CCGCCGCAACAACAACCACAGCGGCAACTA------CTAAGGCT--------------------------G------------------CAAC--------------------------------------------------------------------------AACAACTAC------------------------------CGCA---GCAA------------------------------------------------CA---ACAAA--CACCGCAGCAACAAC----------AACCACCG---CAGCAACAACA
droEug1 scf7180000409032:796141-796404 + GAA----GCAAAAGCGACGGCAGG-CGCAACA---------------------------------------------------------------------------G------------AAG------CAGCTGCAAGCGCAG---------------------------CATCAATT------GTACC------------------------------------------------------------------------------AGGAG-----------AAGCAA---------------------------AAACAGAACTTGTTACT--G------------------------------CAGC----AGCAGCAACAACAGCAGCAGCAACAACAGCAGC---AG------------------------------------------------------------CAGCCG---------------------------------CAACAACAGCAGCAGC------------------------C---------GCAACA---A---------------CAG----------------------CAG-----------------------CAGCCGCAACAACAGCAG------------------CAGCAG------CAACAACAGCAGCAGCAA--------------------------------------------------------------C--------------------------------------------------------------------------AACAGCAGC------------------------------AGCA---GCAA------------------------------------------------CA---ACCGC--AGCTGCTGCAACAAC----------AACAGCAG---CAGCAACCAAT
dm3 chrX:12854189-12854453 + TGCAGCAACTACTACGGCAGCA-------------------------------------------------------------------------------------A------------------------------------------CAACTACT------GCAG---CAACTACTACGGCAGCAACAACTA------------------------------------------------------------------CTGC---AG--------------CAACTA------------------CTACTGCAGCAACAACT-----------ACTGCAGCAACAACTACCGCAGCAACAACAAC-------TGC---------------------------AGCAACTA---------------------------------C---------------------------------------CAC---------------------------------GGCA------------------------------------GCAACA---ACTACAGCTGCAA---------C-------------TACTGCAGCAACA---ACAACTGCAGCAACA-----A------------------------------CAACTGCAGCAA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGCAGCAAC------------------------------AACA---ACTG------------------------------------------------CA---GCAACAA--CAACTGCAGCAAC----------AACTACTG---CAGCAACAACT
droSim2 2r:11014800-11015084 - AGCTGCGACGTCGGCAGCGACAA--CTTATTGGCA--A-CACACACGAAACTTGTTGCGTT-GC----------------CAGCAACAGCA----------------------------------------------------------------------------------------ACAGCTACAGCA------------------------------------------------------------------A------AAGCAACAG-----------CAGCAAGC--------------------------------------------ACACCGGTTACAG-------------------------------------------------------------------CAGA------------------------------------------AACAACAACAACAATAGCAGCAAACAC---------------------------------AGCT---------------GCACTAACAGCAAACATATGAGCAGCA---ACAA-------------------------------------CAGCAGACGCTACAACAGCAG-----CAACAC------------------------------------------------------------------TAA---GA--------------------------G------------------CAACATGAGCAA----ACAC----------------------------------------------------------AGCAGCAAC------------------------------ATTG---CTAG------------------------------------------------CA---AACGCAA--CAAAGGCAGCAGC----------AACATTAC---GAACAACAACT
droSec2 scaffold_68:56963-57193 - AAA----GCAAAGGCGACGCCTGG-CTCACCAGCA--A-CAGATACAGACA------------------------------------------------------------------------------------------CAGCA---------------------------GAAACA------GTACC------------------------------------------------------------------------------AGGAAAAGC-----------AG------------AAGCTAATGTTGCAGCAACAACA-----------G---------------------------CAG-------CAGCAACAACAACAGCAGCAACAACAACAACAGC------------------------------------------------------A------------------------------------GCAGCAA---------------------------------------------------------CAA---------------------CA------------------------------------------------------------------G------------------CAGCAG------CAAGAACAGCAGCAGCAAAAACAGCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---GCAG------------------------------------------CAACTGCA---ATTAA--AGCC---ACATCATC----------TGCAGCAA---CTTCAACTGCA
droYak3 X:19163348-19163600 + GTC-GTGA-----GCCACGCAGCAGCTCC--------------------------C-----------------------------------CTCCCCTGCAGCAGCAGCAATATCAGCAG------------------------CAGCAGCA---------------------------GCAGCAGCAGCA---------------------------------------------------GCAGCAAC------------------AG--------------CAGCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------AGCAACAGC------------------------------------------------------------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCTGCAACAGCAACAGCAACAGCT------------GCAACAGCAACAGCTG------------CAGCATCAGCAGCAGCA------------------------------------------------------------------------------------CTTCGCCAGTCT--G---------ATGAGCAGT------------------------------CACA---GT---------------------------------------------------------AACAA--CAACTCCAACACTAACAAACAGCCGCT-GAGCAGCGACAACAA--
droEre2 scaffold_4784:3586472-3586757 + TGATGCAGCAGCAGCAGAATCTG----------------------CA------------------------------------------------------------C------------------------------ACGCAG---------CACCAGCACAATCTG---CAGCAGCAAAATCAGAGCCACTCGCAGTTGCAGCAACACAACCAGCAGCAGCATCAGCAGCAGCAGCAGCAGCATCAAC----------------------------------------------------------------------------------------------------------------AGCAGCAGC----AGC---------------------------AGC---------------------AACA---------------------------------GC------------------AGC---------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCAGCAGCAACAACAGCAACAGCAGCAG------CAGCAACAGCAGCAGCAT------CAAC---A--------------------------G------------------CAACAGC-----------------------------------------------------------------------AGCAACAGC------------------------------AACAGCAGCAG------------------------------------------------CA---GTTGC--AGCCACAACAGCAGC----------TGCAGCCG---CAACAGCAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATATGCAGCAATGGTAATGTCA-----------------------------TACAC------------------------------------------------CA---ACA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAGT-----TGCTGCTGGCACAGC-------------------------------------AG-------CAACAA---------------CAG----CTGCTGCAGC------------------------------------------------TGCAAATGCAACACGAAAC---------------------------------------ACAACAGCTACAACAGCAA---------------------------------------------------------CAA---------------------CAACAATCGCAGACGC-AGCAGCAGCA---CAC-------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAG---TCAAATCTCATTAGTCATAGTCATGCAACAGCAACAAT------------------------------AACT---GA---------------------------------------------------------AACAA--CAAATGCAACTGC----------AACAAATG---CAACAACAAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCAGACGC-AGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCGCAGACGC-AGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
........CAACGGCCACGCCGGATCTCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................CA-----------------------------TACAC------------------------------------------------CA---ACA---------------------------------------------------------------------------------------------------------A---CAACAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000010000000000000000000000000000000
........CAACGGCCACGCCGGATCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAATCGCAGACGC-AGCAGT....................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA--CAAATGCAACTGC----------AACAA.................2111.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCAGACGC-AGCAGCAGCA---C............................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
..............................................AGCAATGGTAATGTCA-----------------------------TAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCAACAGT-----TGCTGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.201000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAGT-----T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................CA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAGT-----TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAGT-----T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................A---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAGT-----T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.071000000000000000000000000000000000000010000000000000000000000000
...............................................................................................C------------------------------------------------CA---ACA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAACAACAGCAACAGT-----TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAGCAA---------------------------------------------------------CAA---------------------CAACA......................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................A---ACA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAGCAA---------------------------------------------------------CAA---------------------CAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................CA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAGT-----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................CA---ACA---------------------------------------------------------------------------------------------------------A---CAACAACAGCAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACAGCAA---------------------------------------------------------CAA---------------------CAACA......................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
GGATGTGACATCGGGCACGCCAGATCTATACAGCA--AAAATTTGCAGCAATGGTAATATTA-----------------------------TGCACCAACTACA---A---------------------------------------------------------------------------------------------------------------------------------------------CA------A---CAACAACAGCACCAGC-----TGTTGCTTGCACAGC-------------------------------------AG-------CAGCAG---------------CAG----ATGCTGCAGC------------------------------------------------TGCAGATGCAACATGAGACACAACTACAGCTTCAGCAACAACAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC--------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------------------------TCAAATATCATTAGTCATCGTCATACAACGACAACAACAGATAGTGATATAACAAATGAAGCATTTGCAAAGGCAACTG------------------------------------------------C------AAC--AGCCACAGTAGCAGC----------AGCAGCAG---CAGCAACAAC-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------C------AAC--AGCCACAGTAGCAGC----------AGC...................2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------C------AAC--AGCCACAGTAGCAGC----------AGCAGCAG---...........2811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................AG----ATGCTGCAGC------------------------------------------------TGCAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCA...................................................................................................................................................................................................................................................................................................................................................................................................19200.102000200
................................................................................................CAACTACA---A---------------------------------------------------------------------------------------------------------------------------------------------CA------A---CAACAACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAACAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTAGCAGC----------AGCAGCAG---CA.........21200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGC----------AGCAGCAG---CAGCAAC....22200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC----------AGCAGCAG---CAGCAACAAC-23200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC--------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................................................19200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGC----------AGCAGCAG---CAGCAACA...23200.051010000
droGri2
GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATTTGCAGCAACGGTAATGTTA-----------------------------CACTCC------------------------------------------------------------------------------------------AACAACAT------------------------------CAACAA------------------CA------A---CAACAACAGCAGCAGC-----TGTTGCT------GC-------------------------------------AA-------CAACAG---------------CAT----CTGCTGCAGC------------------------------------------------TGCAAATGCAACATGAAAC---------------------------------------AC---------------------------------AACA------------------------------------ACAACT---ACAACAGCTACAG---------C----------------------------T-----------------------------------------------------------------ACAACAGCAACAAC--------------------------------AACAACAACAG------------------CAAC---AGCAG----CTACAGCAGCAGCAGCAGCAGCAAACACAGCAAACAAATCTCATTAGTCATAGTCAT------------------------C-------------------------------------------------------------------------------A---TCA-------AACAGAAGCAGC----------TGTTGCAA---CAGACACAGACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC----------TGTTGCAA---CAGACAC....2011.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------------ACAACT---ACAACAGCTACA...............................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
...............................................................................................CC------------------------------------------------------------------------------------------AACAACAT------------------------------CAACAA------------------CA------A---CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.09110
droWil2
ACA----ACAGCAGCAACG---AA-CGCAACA---------------------------------------------------------------------------G------------------------------------------CAACAGCA------ACAGCAGCAACAATTGCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAGCAA------------------CAATGGCAGCAACAACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------AACAACAACAGCAGCAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---ACAA------------CAGCATCAGCAACAGCAA----CAGCAGCAACGAAT---------GCAACAGCA-----------------A------------------CAGCAACAG---------------------------CAA---CA--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGCAAC------------------------------AATT---GCAG------------------------------------------------CA---ACAAC--AGCAACAGCAGCAAC----------AATGGCAG---CAACAACAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................AA------------------CAATGGCAGCAACAACA-----------ACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.7014014000
.......................................................................................................................................................................................................................................................AACA------ACAGCAAC---AG--------------CAGCAA------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.25505000
..............................................................................................................................................................................................................................................................................................................................AACAACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.20404000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---------------------------------------AACAACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.20400040
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------A------------------CAGCAACAG---------------------------CAA---CA--------------------------G------------------CAAC--------------------------------------------------------------------------A............................................................................................................................................................22200.20401003
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAACA------------------------------ACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
.....................................................................................................................................................................................A---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15302010
............................................................................................................................................................................AACAATTGCA---GC------------------------------------------------------------AACA------ACAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15301020
......................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------AACAACAACAGCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.15300030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA-----------------A------------------CAGCAACAG---------------------------CAA---CA--------------------------..............................................................................................................................................................................................................................................................22200.15300030
......................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------AACAACAACAGCAGCAACA------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300030
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------AATT---GCAG------------------------------------------------CA---ACAAC--AGCA...........................................22200.15301020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA-----------------A------------------CAGCAACAG---------------------------CAA---CA--------------------------..............................................................................................................................................................................................................................................................21200.15300030
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------------------------CA---ACAAC--AGCAACAGCAGC...................................21200.15302010
................................................................................................................................................................................................................................................................................................AA------------------CAATGGCAGCAACAACA-----------ACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15302010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAAT---------GCAACAGCA-----------------A------------------CAGCAAC.............................................................................................................................................................................................................................................................................................................................2580.13101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGCAA----CAGCAGCAACGAA...........................................................................................................................................................................................................................................................................................................................................................................................2690.11100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---AC............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--AGCAACAGCAGCAAC----------AATGG.................23200.10202000
..........................................................................................................................................................................................................................................................A------ACAGCAAC---AG--------------CAGCAA------------------CAATGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
..........................................................................................................................................................................................................................................................A------ACAGCAAC---AG--------------CAGCAA------------------CAATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
...........................................................................................................................................................................................................................................................................................................................AGCAACAACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAAC--AGCAACAGCAGCAAC----------......................21200.10200020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--AGCAACAGCAGCAAC----------AATGGC................24200.10202000
.......................................................................................................................................................................................................................................................AACA------ACAGCAAC---AG--------------CAGCAA------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAA----CAGCAGCAACG.............................................................................................................................................................................................................................................................................................................................................................................................22110.09100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------CAGCATCAGCAACAGCAA----CAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AGCAGCAGC------------------------------------A---ACAA------------CAGCATCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------A---ACAA------------CAGCATCAGCAACAGCAA----CAG.....................................................................................................................................................................................................................................................................................................................................................................................................27120.08101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------A---ACAA------------CAGCATCAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................22140.07100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGC---------------------------------------AACAACAACAGCAGCAACA------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28140.07100010
........................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------AACAACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.07101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------CAA---CA--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGCAAC------------------------------AATT---...............................................................................................................25160.06100010
...............................A---------------------------------------------------------------------------G------------------------------------------CAACAGCA------ACAGCAGCAACAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.06100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------CAGCATCAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................19170.06100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAGCAACAGCAA----CAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAA----CAGCAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................24190.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---A.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC--AGCAACAGCAGCAAC----------A.....................21200.05100001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------------------------AATT---GCAG------------------------------------------------CA---ACAAC--AGCAA..........................................24200.05100010
............................................................................................................................................................................AACAATTGCA---GC------------------------------------------------------------AACA------ACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..................................................................................................................................................................................................................................................................................................................................................AGCAACA-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------AA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACA-----------ACAGCAACA-------------------------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................................................CAACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.....................................................................................................................................................................................................................................................................................................................AATGGCAGCAACAACA-----------ACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------------------------------------CA---ACAAC--AGCAACAGCAGCA..................................24200.05100010
............................................................................................................................................................................AACAATTGCA---GC------------------------------------------------------------AACA------ACAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...................................................................................................................................................................................GCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---GCAG------------------------------------------------CA---ACAAC--AGCAACAGCAGC...................................25200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------ACAAC---AGCAGCAGC------------------------------------A---ACAA------------CAG...........................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---GCAG------------------------------------------------CA---ACAAC--AGCAACAGCAG....................................24200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------AACAACAACAGCAGCAACA------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
..........................................................................................................................................................AGCA------ACAGCAGCAACAATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACA------------------------------ACAAC---AGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAAC--AGCAACAGCAGCAAC----------AATGGC................27200.05101000
...................................................................................................................................................................................................................................................................................................................................CA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GCAG------------------------------------------------CA---ACAAC--AGCAACAGCAGC...................................24200.05101000
............................................................................................................................................................................AACAATTGCA---GC------------------------------------------------------------AACA------ACAGCAAC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------AATT---GCAG------------------------------------------------CA---ACAAC--AGCAA..........................................23200.05101000
.............................ACA---------------------------------------------------------------------------G------------------------------------------CAACAGCA------ACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC---AGCAGCAGC------------------------------------A---ACAA------------CA............................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
........................................................................................................................................................................................................................................................ACA------ACAGCAAC---AG--------------CAGCAA------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.................................................................................................................................................................................................................................................................................................................................AACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAACA------------------------------ACAAC---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---A.............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
...............................................................................................................................................................................AATTGCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
........................................................................................................................................................................................................................................................................................................................GGCAGCAACAACA-----------ACAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG---------------------------CAA---CA--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGC.......................................................................................................................................................21200.05101000
................................................................................................................................................................................................................................................................................................................................................ACAGCAACA-------------------------------------------------ACAAC---------------TGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAAC----------AATGGCAG---CAACAACA...25200.05101000
.....................................................................................................................................................................................................................................................................................................................AATGGCAGCAACAACA-----------ACAGCAACA-------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
........................................................................................................................................................................................................................................................................................................................GGCAGCAACAACA-----------ACAGCAACA-------------------------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...............................................................................................................................................................................................................................................................................................CAA------------------CAATGGCAGCAACAACA-----------ACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.................................................................................................................................................................................TTGCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACA------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.....................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------AACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAAC----------AATGG.................20200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG---------------------------CAA---CA--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGCA......................................................................................................................................................21200.05101000
...................................................................................................................................................................................GCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC--AGCAACAGCAGCAAC----------AATGGC................25200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------AACAACAACAGCAGCAACA------------------------------ACAAC---A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCA-----------------A------------------CAGCAACAG---------------------------CAA---C.........................................................................................................................................................................................................................................................................................22200.05100001
...............................................................................................................................................................................................................................................................................................CAA------------------CAATGGCAGCAACAACA-----------ACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.................................................................................................................................................................................TTGCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC--AGCAACAGCAGCAAC----------AATGG.................25200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------------------------CA---ACAAC--AGCAACAGCAGCA..................................22200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACA------------------------------ACAAC---AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---..............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................................................................................................................................................AG--------------CAGCAA------------------CAATGGCAGCAACAACA-----------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.................................................................................................................................................................................................................................................................................................A------------------CAATGGCAGCAACAACA-----------ACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.....................................................................................................................................................................................A---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..................................................................................................................................................................................TGCA---GC------------------------------------------------------------AACA------ACAGCAAC---AG--------------CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........................................................................................................................................................................................................................................................CA------ACAGCAAC---AG--------------CAGCAA------------------CAATGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAA----CAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
....................................................................................................................................................................................................................................................................................................................................A-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------GCAACAGCA-----------------A------------------CAGCAACAG---------------------------C...............................................................................................................................................................................................................................................................................................21200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATT---GCAG------------------------------------------------CA---ACAAC--AGCAACAGC......................................24200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------------------------------------CA---ACAAC--AGCAACAGCAG....................................22200.05101000
...................................................................................................................................................................................................................................................................AGCAAC---AG--------------CAGCAA------------------CAATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------------------ACAAC---AGCAGCAGC------------------------------------A---ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
....................................................................................................................................................................................................................................................................................................................................A-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACA------------------------------ACAAC---AGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
........................................................................................................................................................................................................................................................ACA------ACAGCAAC---AG--------------CAGCAA------------------CAATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.................................................................................................................................................................................................................................................................................................................................AACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...........................................................................................................................................................................................................................................................................................................................AGCAACAACA-----------ACAGCAACA-------------------------------------------------ACAAC---------------TGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
..................................................................................................................................................................................................................................................................................................................................................AGCAACA-------------------------------------------------ACAAC---------------TGCAGCAGC---------------------------------------AACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------AATT---GCAG------------------------------------------------CA---ACAAC--AGC............................................21200.05101000
................................................................................................................................................................................................................................................................................................AA------------------CAATGGCAGCAACAACA-----------ACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGCAAC------------------------------AATT---G..............................................................................................................20200.05101000
.......................................................................................................................................................................................................................................................AACA------ACAGCAAC---AG--------------CAGCAA------------------CAATGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...........................................................................................................................................................................CAACAATTGCA---GC------------------------------------------------------------AACA------ACAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AGCAGCAGC------------------------------------A---ACAA------------CAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.................................................................................................................................................................................................................................................................................................A------------------CAATGGCAGCAACAACA-----------ACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAACA------------------------------ACAAC---A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100001
dp5
GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATATGCAGCAATGGTAATGTT-CCCCAGCATATCATACTCCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---CAGC-----AGCT--------------------------------------------------GCTGC----------------------------------AGCAACAGCAATACCAACAACATC------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAACAGTTGCAGCTACAGCT---------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGCAGCCA-----------CTAGCACTCGCACAAGCACAGCCA------------CAACCACAAACACAAATA-------------------------------------CAG---ACCA--CTCG-TAGTCATAGT------------------------GAACT--------------------------------------------------------------------------------------------AAATGAGACAGC----------ATCCAATA---CACC--CTCCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCCA-----------CTAGCAC....................................................................................................................................................................................................................................................................................2111.0010001000000
.....TGACAACGGCCACGCCGGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCACTCGCACAAGCACAGCCA------------CA.....................................................................................................................................................................................................................................................2511.0010100000000
..........ACGGCCACGCCGGATCTCTATAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------------------------GAACT--------------------------------------------------------------------------------------------AAATGAGACAGC----------ATCC..................2311.0010010000000
droPer2
GGATGTGACAACGGCCACGCCGGATCTCTATAGCA--A-AATATGCAGCAATGGTAATGTT-CCCCAGCATATCATACTCCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---CAGC-----AGCT--------------------------------------------------GCTGC----------------------------------ACCAACAGCAATACCAACAACATC------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAACAGTTGCAGCTACAGCT---------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGCAGCCA-----------CTAGCACTCGCACAAGCACAGCCACAGCCACAACCACAACCACAAACACAAATA-------------------------------------CAG---ACCA--CTCG-TAGTCATAGT------------------------GAACT------------------------------------------------------------------------------------------------------------------------AA---ATGAGACAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------CAG---ACCA--CTCG-TAGTCATAGT------------------------G............................................................................................................................................2311.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATAGT------------------------GAACT------------------------------------------------------------------------------------------------------------------------AA---ATGG.......1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGT------------------------GAACT------------------------------------------------------------------------------------------------------------------------AA---ATGAGACAGC.2311.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAACAGTTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.081001000
droAna3
CAACG-----GCAACAGGA---A----------------------CTGCA---------------------------------------------------------A------------------------------------CG---GCCACAGCA------ACAGCAACTACAACT------GGAACAGCA---------------------------------------------------------------A------CAGCAACAG-----------CAACTG-----------------------------------------------------------------------------CAAC-------AGC------------------------AAC---TACAACTGCAACAGCAACTACA------------------------------------------------------------------AGTGCAACAGCAACTTC---A---------------------ACTCCAACAGCA---------ACAACA---ATTA-------------------------------------CAA-----------------------------------------------------------CAGAAA------CTAGAACAGCAACAGCAA------CTTAAATT--------------------------A------------------CAAC--------------------------------------------------------------------------AGCAGCTAG------------------------------AACA---GCAA------------------------------------------------CA---GCAAT--TACAACAGCAGCTAG----------AACAACAA---CAACAGCTAC-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GGATGCGG--GCGGCC-TGCCAGTCTTCCAGAGCGCCA-GCCAAGCAGCC--------GTCG-----------------------------CACAG------CAGCAGCAACAACAGCAG------------------------CAGCAGCA---------------------------------GC------------------------------------------------------------AAC------------------AACAACATT-----------TG------------AATCTTCAGTTGCATCAGCAGCACTTGGGCCT--T------------------------------CATC----TGCAACAGCAACAGCAGCTGCAACTTCAGCAGC---AG---------------------------------------------------------------------------------------CAGCAG------CAACATAATGCACAGG------------------------C---------GCA----------------------------------------ACAGCAGCAG-----------------------CAGATC------------------------------------------------------------------CAA-----------------------------------------------------G-----------------------------------------------------------------------------------------------------------------TGCA---GCAG------------------------------------------------CA---GCAGCAA--CAACAACAACAGC----------AGCAGCAA---CAACAACAACASizeHit CountTotal NormTotal
No Reads
droKik1
GGCTGCAACAGCTACCACAGCTG-------------------------CA---------------------------------------------------------A------------------------------------------CAGCAACA------GCAG---CAACAGCTAAAGCTACAACAGCTGCAAA---------------------------------------------------------------------AG--------------CAGCAA------------------AAAAGACGGCTACAACA-----------GCAGCAACGGTGGCAACAGCTACAACTGCAGCTGC----AGT---------------------------GGTATAAA---------------------C---------------------------------------------------AGC---------------------------------CACA------------------------------------GAA---ACTGCAACAGT---TA---------C---AACAA-CAGGTACAACAA------------CTACACCAGCA-----------------G------------------CAGCTCCACCAA------------------------CTCATACA--------------------------G------------------CAGC--------------------------------------------------------------------------AGCTACAAA------------------------------AACT---GCAA------------------------------------------------CA---ACAAG--TGCTACAACAACTGC----------AACAGGTG---CAGCTACAGCASizeHit CountTotal NormTotal
No Reads
droFic1
TGTGGCAACTACAACGACAACA-------------------------------------------------------------------------------------GCAGGATCAGCAGAAAGATGACCAGCAG---------CA---ACC---------------------------------------------------------------------------------------------------------ACAGCAAC---AGCAACAATTCAAGAGCAGCTGGGAGAACTCCTAA-------------------------------AG-------CAACAG------------CAGCAGC-------AACAGC------------------------AGC---AAACACAGCAACGACAACAACA------------------------------------------------------------------AT------------------TGCAACAGCAACTGTGGCAACTACAACGACAACC---------ACA----------------------------------------GCAACAGCAA-----------------------CAAATTCAAG------AG------------------CAGCTAAGAGAA------------------------CTCCTCAA--------------------------G------------------CAAC--------------------------------------------------------------------------AGCAGCAAA------------------------------CACA---GCAA------------------------------------------------CG---ACAACAA--CAATTGCAACAGC----------AACTGTGG---CAACTACAACCSizeHit CountTotal NormTotal
No Reads
droEle1
CAA--------CAGCAACACCTG----------------------CACCAGCA------------------------------------------------------G------------------------------------------CAACATCA------GCAC---CAACAGC---------------------------------------------------------------------AACATCAACAA---CACCAACAGCAA-----------CATCAA-----------------------------------------------------------------------------CAAC-------ACC------------------------AGC---ACCAGCACCAACACCAACAGCA------------------------------------------------------------------GTCGCAGCAGCAACATC---A---------------------------------------------------------------------------------------------------------------------------------------------------------------G------CAACACCAGCAGCATCAGCAACACCAGC--------------AACACCAGCAACACCAG------------------CAAC--------------------------------------------------------------------------ATCAGCAAC------------------------------ATCT---GCAGCAACAGGCCAACTTTCTCCACATCCAGCAATCGCTGCAGCATAACCACCAGCTGAGCCAC--CCAGAACCAATCC----------ATCAGATG---CCCCA-----ASizeHit CountTotal NormTotal
No Reads
droRho1
GTG----ACAACA-CTACACCA-------------------------------------------------------------------------------------GCAA---------------------------------------CAT------------------------------------------------------------------------CAACAGCTACAACAGCAGCAGCAACA------ACAGCAGC---AA--------------CAACAA------------------CAGCTTC------------------------------------------------------------AACAGCAGCAATACCAGCAACAAC---------------TGCAGCAGC---------------------------------------AACAACAACTGCAGCAGCA------------------------------GCAAC---AACAACA------------------------------------ACA---TCAA------------CACCAACACTATCTGCAA----CAGCAGCAACAAAC---CCTGCC-------------------------------------------------------------------------------------------------------------A------------CCGCCTCCAATACAACATCAGCAATACAACAC----------------------------------------------------------AGCGGCTAT------------------------------AACG---CCCA------------------------------------------------CA---T-ACCAA--CAACTCCAACAGC----------AACAACAA---CAGCAGCAACASizeHit CountTotal NormTotal
No Reads
droBia1
GCA----GCAGCAGCAACGTCTG----------------------TGGCAGCA------------------------------------------------------G---------------------------------------------CAACA------CCAG---CAACTGTAGGAGC---------------------------------------------------------------AACATCAGCAA---CAGCAACAACAACAAC-----------TG-----------------------------------------------TAGCAGCA-------------------------------------------------ACAGC---------------AGCAGCAAC---------------------------------------ACCAACAACTGTAGGAGCA------------------------------ACATC---AGCAACAGC------------------------------------A---ACAA------------CAACAACTGTAGCAGCAA----CAGCAGCAGCGATA---TCAACAACTGTAGCA-----G------------------------------CAACAGCAGCAG------------------------C-----------------------------------------------------GAT--------------------------------------------------------------------------ATCAACAAC------------------------------TGTA---GCAG---------------------------------------CAGCAGCAACA---ACCGA--GGGAGCAACAACAGC----------AACACTTG---CAGCGGCAACASizeHit CountTotal NormTotal
No Reads
droTak1
GGCAGCAACAACCACTACAGCAG----------------------------CA------------------------------------------------------A------------------------------------------CCACTAAG------GCAG---CAACAGCTACGGTAGCAACAACCACAGT---------------------------------------------------------------------CG--------------CAACAA------------------CCAAGGCAGCAACAACC-----------ACAGCGGCGACAACCAAGGCAGCAACAACAACCAC----TGC---------------------------AGCAACAA---------------------C---------------------------------------------------CAC---------------------------------AGCG------------------------------------GCA---ACTACTAAGGC------------TGCAACAACAA----CCACCGCAGCAACA---ACAACC--------------------------A------------------CCGCCGCAACAACAACCACAGCGGCAACTA------CTAAGGCT--------------------------G------------------CAAC--------------------------------------------------------------------------AACAACTAC------------------------------CGCA---GCAA------------------------------------------------CA---ACAAA--CACCGCAGCAACAAC----------AACCACCG---CAGCAACAACASizeHit CountTotal NormTotal
No Reads
droEug1
GAA----GCAAAAGCGACGGCAGG-CGCAACA---------------------------------------------------------------------------G------------AAG------CAGCTGCAAGCGCAG---------------------------CATCAATT------GTACC------------------------------------------------------------------------------AGGAG-----------AAGCAA---------------------------AAACAGAACTTGTTACT--G------------------------------CAGC----AGCAGCAACAACAGCAGCAGCAACAACAGCAGC---AG------------------------------------------------------------CAGCCG---------------------------------CAACAACAGCAGCAGC------------------------C---------GCAACA---A---------------CAG----------------------CAG-----------------------CAGCCGCAACAACAGCAG------------------CAGCAG------CAACAACAGCAGCAGCAA--------------------------------------------------------------C--------------------------------------------------------------------------AACAGCAGC------------------------------AGCA---GCAA------------------------------------------------CA---ACCGC--AGCTGCTGCAACAAC----------AACAGCAG---CAGCAACCAATSizeHit CountTotal NormTotal
No Reads
dm3
TGCAGCAACTACTACGGCAGCA-------------------------------------------------------------------------------------A------------------------------------------CAACTACT------GCAG---CAACTACTACGGCAGCAACAACTA------------------------------------------------------------------CTGC---AG--------------CAACTA------------------CTACTGCAGCAACAACT-----------ACTGCAGCAACAACTACCGCAGCAACAACAAC-------TGC---------------------------AGCAACTA---------------------------------C---------------------------------------CAC---------------------------------GGCA------------------------------------GCAACA---ACTACAGCTGCAA---------C-------------TACTGCAGCAACA---ACAACTGCAGCAACA-----A------------------------------CAACTGCAGCAA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGCAGCAAC------------------------------AACA---ACTG------------------------------------------------CA---GCAACAA--CAACTGCAGCAAC----------AACTACTG---CAGCAACAACTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................AACTA------------------CTACTGCAGCAACAACT-----------ACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................ACTA------------------------------------------------------------------CTGC---AG--------------CAACTA------------------CTACTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACAGCTGCAA---------C-------------TACTGCA................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AACTA------------------CTACTGCAGCAACAACT-----------ACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................TACGGCAGCAACAACTA------------------------------------------------------------------CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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............................................................................................................................................................................AACTACTACGGCAGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC------------------------------AACA---ACTG------------------------------------------------CA---GCAAC.................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA-----A------------------------------CAACTGCAGCAA------------------------C------.........................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA---ACAACTGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAACAA--CAACTGCAGCAAC----------......................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGCAGCAAC------------------------------......................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC-------TGC---------------------------AGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---ACAACTGCAGCAACA-----A------------------------------CAACTGC.............................................................................................................................................................................................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----A------------------------------CAACTGCAGCAA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGC..........................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGCAGCAAC------------------------------AACA---ACTG------------------------------------------------C..........................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----A------------------------------CAACTGCAGCAA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGC..........................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGCAGCAAC------------------------------AACA---ACTG------------------------------------------------C..........................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---ACAACTGCAGCAACA-----A------------------------------CAACTGC.............................................................................................................................................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................A-------------------------------------------------------------------------------------A------------------------------------------CAACTACT------GCAG---CAACTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................CAACAACTA------------------------------------------------------------------CTGC---AG--------------CAACTA------------------CT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------------AACA---ACTG------------------------------------------------CA---GCAACAA--CAACTGC......................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AACTA------------------------------------------------------------------CTGC---AG--------------CAACTA------------------CTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------A------------------CAAC--------------------------------------------------------------------------TGCAGCAAC------------------------------AACA---ACTG------------------------------------------------C..........................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................A-------------------------------------------------------------------------------------A------------------------------------------CAACTACT------GCAG---CAACTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAACTGCAGCAACA-----A------------------------------CAACTGC.............................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CA-------------------------------------------------------------------------------------A------------------------------------------CAACTACT------GCAG---CAACTACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................ACAACTA------------------------------------------------------------------CTGC---AG--------------CAACTA------------------CT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AACTACT------GCAG---CAACTACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-----A------------------------------CAACTGCAGCAA------------------------C------A--------------------------A------------------CAAC--------------------------------------------------------------------------TGC..........................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---ACTG------------------------------------------------CA---GCAACAA--CAACTGC......................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AACAACTA------------------------------------------------------------------CTGC---AG--------------CAACTA------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------------------------AACA---ACTG------------------------------------------------CA---GCAACAA--CAACTGC......................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................A------------------------------------------CAACTACT------GCAG---CAACTACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CA-------------------------------------------------------------------------------------A------------------------------------------CAACTACT------GCAG---CAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC----------AACTACTG---CAGCAAC....2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GCAACAACTA------------------------------------------------------------------CTGC---AG--------------CAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CAACAACT-----------ACTGCAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGCTGCGACGTCGGCAGCGACAA--CTTATTGGCA--A-CACACACGAAACTTGTTGCGTT-GC----------------CAGCAACAGCA----------------------------------------------------------------------------------------ACAGCTACAGCA------------------------------------------------------------------A------AAGCAACAG-----------CAGCAAGC--------------------------------------------ACACCGGTTACAG-------------------------------------------------------------------CAGA------------------------------------------AACAACAACAACAATAGCAGCAAACAC---------------------------------AGCT---------------GCACTAACAGCAAACATATGAGCAGCA---ACAA-------------------------------------CAGCAGACGCTACAACAGCAG-----CAACAC------------------------------------------------------------------TAA---GA--------------------------G------------------CAACATGAGCAA----ACAC----------------------------------------------------------AGCAGCAAC------------------------------ATTG---CTAG------------------------------------------------CA---AACGCAA--CAAAGGCAGCAGC----------AACATTAC---GAACAACAACTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AAA----GCAAAGGCGACGCCTGG-CTCACCAGCA--A-CAGATACAGACA------------------------------------------------------------------------------------------CAGCA---------------------------GAAACA------GTACC------------------------------------------------------------------------------AGGAAAAGC-----------AG------------AAGCTAATGTTGCAGCAACAACA-----------G---------------------------CAG-------CAGCAACAACAACAGCAGCAACAACAACAACAGC------------------------------------------------------A------------------------------------GCAGCAA---------------------------------------------------------CAA---------------------CA------------------------------------------------------------------G------------------CAGCAG------CAAGAACAGCAGCAGCAAAAACAGCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---GCAG------------------------------------------CAACTGCA---ATTAA--AGCC---ACATCATC----------TGCAGCAA---CTTCAACTGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---GCAG------------------------------------------CAACTGCA---ATT...................................................2220.5010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------CA------------------------------------------------------------------G------------------CAGCAG------CAAGAACAGCA.............................................................................................................................................................................................................................................................................................................2220.5010100
...............................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGC------------------------------------------------------A------------------------------------GCAGCAA---------------------------------------------------------CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
................................................................................................................................................................................................................................................................................................................................CAACA-----------G---------------------------CAG-------CAGCAACAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
.................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------------------------------------------------------A------------------------------------GCAGCAA---------------------------------------------------------CAA---------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
............................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGC------------------------------------------------------A------------------------------------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000
droYak3
GTC-GTGA-----GCCACGCAGCAGCTCC--------------------------C-----------------------------------CTCCCCTGCAGCAGCAGCAATATCAGCAG------------------------CAGCAGCA---------------------------GCAGCAGCAGCA---------------------------------------------------GCAGCAAC------------------AG--------------CAGCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------AGCAACAGC------------------------------------------------------------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCTGCAACAGCAACAGCAACAGCT------------GCAACAGCAACAGCTG------------CAGCATCAGCAGCAGCA------------------------------------------------------------------------------------CTTCGCCAGTCT--G---------ATGAGCAGT------------------------------CACA---GT---------------------------------------------------------AACAA--CAACTCCAACACTAACAAACAGCCGCT-GAGCAGCGACAACAA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCTG------------CAGCATCA..................................................................................................................................................................................................................................................................................1911.00100000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACAGCCGCT-GAGCAGCGACAAC....2511.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------------------------------------------------AGCAACAGC------------------------------------------------------------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................27200.5010000000000010
...............................................................................................................TATCAGCAG------------------------CAGCAGCA---------------------------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.20101000000000
.....................................................................................................................CAG------------------------CAGCAGCA---------------------------GCAGCAGCAGCA---------------------------------------------------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000002
......................................................................................................................................................................................................................................................CAAC------------------AG--------------CAGCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------AGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------------------AGCAACAGC------------------------------------------------------------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CA.............................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
..............................................................................................................................................................................................................................................................................................GCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------AGCAACAGC------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
........................................................................................................................................................................................AGCAGCA---------------------------------------------------GCAGCAAC------------------AG--------------CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.....................................................................................................................CAG------------------------CAGCAGCA---------------------------GCAGCAGCAGCA---------------------------------------------------GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
....................................................................................................................GCAG------------------------CAGCAGCA---------------------------GCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
..................................................................................................................................................................................................................................................GCAGCAAC------------------AG--------------CAGCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
................................................................................................................ATCAGCAG------------------------CAGCAGCA---------------------------GCAGCAGCAGCA---------------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC------------------------------------------------------------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAG............................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC------------------------------------------------AGCAACAGC------------------------------------------------------------------------------------AACAGC------------------------------------A---..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
...................................................................................................................................................CAGCA---------------------------GCAGCAGCAGCA---------------------------------------------------GCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
........................................................................................................................................................................................AGCAGCA---------------------------------------------------GCAGCAAC------------------AG--------------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010000000
.............................................................................................................................................................................................................................................................................G--------------CAGCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------AGCAACAGC------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
....................................................................................................................................................................................................................................................AGCAAC------------------AG--------------CAGCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC------------------------------------------------------------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................20200.05100000100000
.........................................................................................................................................................................................GCAGCA---------------------------------------------------GCAGCAAC------------------AG--------------CAGCA------------------------------------------------------------------------------------GCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000
.....................................................................................................................................................................................................................................................GCAAC------------------AG--------------CAGCA------------------------------------------------------------------------------------GCAGCAGC------------------------------------------------AGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
droEre2
TGATGCAGCAGCAGCAGAATCTG----------------------CA------------------------------------------------------------C------------------------------ACGCAG---------CACCAGCACAATCTG---CAGCAGCAAAATCAGAGCCACTCGCAGTTGCAGCAACACAACCAGCAGCAGCATCAGCAGCAGCAGCAGCAGCATCAAC----------------------------------------------------------------------------------------------------------------AGCAGCAGC----AGC---------------------------AGC---------------------AACA---------------------------------GC------------------AGC---------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCAGCAGCAACAACAGCAACAGCAGCAG------CAGCAACAGCAGCAGCAT------CAAC---A--------------------------G------------------CAACAGC-----------------------------------------------------------------------AGCAACAGC------------------------------AACAGCAGCAG------------------------------------------------CA---GTTGC--AGCCACAACAGCAGC----------TGCAGCCG---CAACAGCAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................AAAATCAGAGCCACTCGCAGTTGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.............................................................................................................................................................................GCAGCAAAATCAGAGCCACTCGCAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
................................................................................................................................................................................GCAAAATCAGAGCCACTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................................................................................................................GCAACACAACCAGCAGCAGCATCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...............................................................................................................................................................................AGCAAAATCAGAGCCACTCGCAGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
......................................................................................................................................................................TG---CAGCAGCAAAATCAGAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.............................................................................................................................................................................GCAGCAAAATCAGAGCCACTCGCAGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACAGCAGC----------TGCAGCCG---CA.........2211.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------------------------------AACAGCAGCAG------------------------------------------------CA---GTT...................................................2220.5010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC------------------------------AACAGCAGCAG------------------------------------------------CA---GTT...................................................2120.5010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAT------CAAC---A--------------------------G------------------CAACA......................................................................................................................................................................................................................................1930.3310000100
...............................................................................................................................................................................................................................................GCAGCATCAAC----------------------------------------------------------------------------------------------------------------AGCAGCAGC----AGC---------------------------AGC---------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................20200.1531000020
.......................................................................................................................................................................................................................GCAGCAGCATCAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1022000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................19200.1020002000
...................................................................................................................................................................................................................ACCAGCAGCAGCATCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------AGC---------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................23200.1021000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------------------------------AACAGCAGCAG------------------------------------------------C..........................................................18200.1020000020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................24120.0810000010
.....................................................................................................................................................................................................................................AGCAGCAGCAGCAGCATCAAC----------------------------------------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0811000000
...................................................................................................................................................................................................................................................CATCAAC----------------------------------------------------------------------------------------------------------------AGCAGCAGC----AGC---------------------------AGC---------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.0610001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................22160.0610000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------------------AACAGCAGCAG------------------------------------------------CA---GT....................................................18190.0511000000
........................................................................................................................................................................................................................CAGCAGCATCAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAACAGCAGC................................................................................................................................................................................................................................................................................................................................20200.0510100000
........................................................................................................................................................................................................................................................................................................................................................................................GC---------------------------AGC---------------------AACA---------------------------------GC------------------AGC---------------------------------AACAGC------------------------------------A---GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................27200.0511000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCA..........................................................................................................................................................................................................................................................................................................................................................19200.0510000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------G------------------CAACAGC-----------------------------------------------------------------------AGCAACAGC------------------------------A.....................................................................................................................19200.0510000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAACAGCAGCAG------C.......................................................................................................................................................................................................................................................................................................................20200.0511000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAG------CAGCAACAGC..............................................................................................................................................................................................................................................................................................................20200.0511000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAG------CAGCAACAGCA.............................................................................................................................................................................................................................................................................................................23200.0510000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAG------CAGCAACAGCAGCA..........................................................................................................................................................................................................................................................................................................25200.0510001000
....................................................................................................................................................................................................................................................ATCAAC----------------------------------------------------------------------------------------------------------------AGCAGCAGC----AGC---------------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
..............................................................................................................................................................................................................................................................................................................................................................................GCAGC----AGC---------------------------AGC---------------------AACA---------------------------------GC------------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------GC------------------AGC---------------------------------AACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................26200.0511000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------CAGCAACAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................21200.0510001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAGCAG------........................................................................................................................................................................................................................................................................................................................21200.0510001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAA---------------------------------------------------------------------------CAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................19200.0510001000
...................................................................................................................................................................................................................................................CATCAAC----------------------------------------------------------------------------------------------------------------AGCAGCAGC----AGC---------------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC-----------------------------------------------------------------------AGCAACAGC------------------------------AACAGC................................................................................................................20200.0510100000
................................................................................................................................................................................................................................................................................................................................................................................AGC----AGC---------------------------AGC---------------------AACA---------------------------------GC------------------AGC---------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------CAGCAACAGCAGCAGC........................................................................................................................................................................................................................................................................................................20200.0511000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAG------CAGCAACAGCAGC...........................................................................................................................................................................................................................................................................................................24200.0510000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................20200.0510100000
..........................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC----AGC---------------------------AGC---------------------AACA---------------------------------GC------------------AGC---------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000
..........................................................................................................................................................................................................................GCAGCATCAGCAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCAGCAGCAA................................................................................................................................................................................................................................................................................................................................................22200.0511000000
..............................................................................................................................................................................................................................CATCAGCAGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510001000
.............................................................................................................................................................................................................................GCATCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------------------------------------------------------------CAGCAGCAGCAGCAACA..............................................................................................................................................................................................................................................................................................................................................21200.0510000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAG------CAGC....................................................................................................................................................................................................................................................................................................................19200.0510100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAGC................................................................................................................................................................................................................................................................................................................................19200.0511000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................18200.0510000100
.........................................................................................................................................................................................................................................................................................................................................................................................C---------------------------AGC---------------------AACA---------------------------------GC------------------AGC---------------------------------AACAGC------------------------------------A---GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG------CAGCAACAGC..............................................................................................................................................................................................................................................................................................................19200.0510000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------A---GCAA---------------------------------------------------------------------------CAGCAGCAGCAGCAAC...............................................................................................................................................................................................................................................................................................................................................22200.0510100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAGCAG------CAGCA...................................................................................................................................................................................................................................................................................................................23200.0510001000
.......................................................................................................................................................................................................................GCAGCAGCATCAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000

Generated: 05/19/2015 at 12:00 PM