ID:

dvi_259

 Coordinate:

scaffold_13050:2029226-2029276 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.7 -20.7 -19.8 -19.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
LINEJ1_DMLINEJockey+
mature
  1. dvi_260  scaffold_12823:724887-724911 -
  2. dvi_259  scaffold_13050:2029252-2029276 -
  3. dvi_374  scaffold_13324:146997-147021 +
  4. scaffold_13324:1113473-1113497 -
star

Sense Strand Reads

CGGTTTTTACTCAGTGCTGCTGCAGTCGAGGTGAATGCCGTGTCTTTGGCTACTTCCTTGTGCAGCTCAGCGGGCTTCGGCTTAGCTTTCTGTATAGATTTAGAAGTGTTTATAACTCCTTTATGTTTTTTACTAGCAGGCAGGTCGCGTT
***********************************....((.........((((((..(((((((...(((.(((....)))..)))..)))))))......))))))......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M027
male body		 SRR060676
9xArg_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060673
9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060656
9x160_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 M061
embryo
 SRR060658
140_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060683
160_testes_total
 M028
head
 V047
embryo
 GSM1528803
follicle cells		 SRR060679
140x9_testes_total
 SRR060655
9x160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060680
 9xArg_testes_total
 SRR060689
160x9_testes_total
 SRR060681
Argx9_testes_total
 V053
head
..................................................TACTTCCTTGTGCAGCTCAGCGGGC............................................................................ 25 0 4 38.25 153 23 86 11 4 3 0 2 1 3 1 1 1 3 0 3 2 7 0 0 0 1 1 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGG............................................................................. 24 0 4 15.75 63 16 0 10 9 0 1 5 3 2 2 4 1 0 5 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGG.............................................................................. 23 0 4 8.75 35 8 0 8 3 2 2 1 2 2 1 1 0 0 2 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTGCTGCAGTCG........................................................................................................................... 24 0 4 5.75 23 2 0 2 5 1 3 1 0 0 1 0 2 0 1 1 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGTCGAGG........................................................................................................................ 26 0 4 5.50 22 10 0 3 0 3 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTGCTGCAGTCGAGG........................................................................................................................ 27 0 4 5.50 22 9 0 5 3 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTCGAGG........................................................................................................................ 25 0 4 4.75 19 12 0 2 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGAG......................................................................................................................... 23 0 4 4.50 18 1 0 2 2 3 0 1 0 1 2 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGTCG........................................................................................................................... 23 0 4 4.00 16 0 0 1 0 4 4 0 1 1 0 0 0 2 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGC................................................................................ 21 0 4 3.75 15 3 0 2 2 1 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGGCT........................................................................... 26 0 4 3.50 14 2 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCG........................................................................................................................... 21 0 4 3.50 14 1 0 0 1 0 2 1 1 0 0 1 1 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTCG........................................................................................................................... 22 0 4 3.50 14 2 0 2 1 0 1 2 2 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCG............................................................................... 22 0 4 3.25 13 2 0 1 1 0 1 1 1 0 1 1 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGGCTT.......................................................................... 27 0 4 2.75 11 8 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGGCTTC......................................................................... 28 0 4 2.50 10 4 2 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGTC............................................................................................................................ 22 0 4 2.25 9 0 0 0 0 3 1 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGAGG........................................................................................................................ 24 0 4 2.00 8 5 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTCGAG......................................................................................................................... 24 0 4 2.00 8 3 0 0 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTC............................................................................................................................ 20 0 4 2.00 8 0 0 0 0 0 0 1 0 2 0 1 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTGCTGCAGTCGAG......................................................................................................................... 26 0 4 1.75 7 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGTCGAG......................................................................................................................... 25 0 4 1.75 7 0 0 0 0 3 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTGCTGCAGTCGA.......................................................................................................................... 25 0 4 1.75 7 2 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTGCTGCAGTC............................................................................................................................ 23 0 4 1.50 6 0 0 0 0 0 2 0 2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGT............................................................................................................................. 21 0 4 1.25 5 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................TTCCTTGTGCAGCTCAGCGG.............................................................................. 20 0 4 1.25 5 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTC............................................................................................................................ 21 0 4 1.25 5 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTTTACTAGCAGGCAGGTCGCGT. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTCGA.......................................................................................................................... 23 0 4 1.00 4 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGAGGTG...................................................................................................................... 26 0 4 1.00 4 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
....TTTTACTCAGTGCTGCTGCAG.............................................................................................................................. 21 0 4 1.00 4 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTCCTTGTGCAGCTCAGCGGGC............................................................................ 22 0 4 1.00 4 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGTCGA.......................................................................................................................... 24 0 4 0.75 3 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGAC............................................................................ 25 1 4 0.75 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGAGGT....................................................................................................................... 25 0 4 0.75 3 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTCCTTGTGCAGCTCAGCGGGCTTC......................................................................... 25 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTCGAGGT....................................................................................................................... 26 0 4 0.50 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTCGAGGTG...................................................................................................................... 27 0 4 0.50 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ACTTCCTTGTGCAGCTCAGCGGGC............................................................................ 24 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTCCTTGTGCAGCTCAGCGGGCTTCG........................................................................ 26 0 4 0.50 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ACTTCCTTGTGCAGCTCAGCGGGCTTC......................................................................... 27 0 4 0.50 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTGCTGCAGT............................................................................................................................. 22 0 4 0.50 2 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TAACTCCTTTATGTTTTTTACTAGCAG............ 27 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTAGAAGTGTTTATAACTCCT............................... 21 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TGCCGTGTCTTTGGCTACTTCCTTGTG......................................................................................... 27 0 6 0.50 3 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......TACTCAGTGCTGCTGCAGT............................................................................................................................. 19 0 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGT............................................................................................................................. 20 0 4 0.50 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGA.......................................................................................................................... 22 0 4 0.50 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................TGCCGTGTCTTTGGCTACTTCCTTG........................................................................................... 25 0 6 0.33 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................CTTAGCTTTCTGTATAGATTTAGAAG............................................. 26 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTAGCTTTCTGTATGGATTTAGAAG............................................. 25 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTCTGTATAGATTTAGAAGTG........................................... 21 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................TTAGCTTTCTGTATAGATTTAGAAGTGT.......................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TAGCTTTCTGTATAGATTTAGAAGT............................................ 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTCCTTGTGCAGCTCAGCGGGCTTCGG....................................................................... 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTTAGCTTTCTGTATAGATTTAGA............................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTGCTGTAGTCG........................................................................................................................... 24 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAACTCAGCGGGC............................................................................ 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAG................................................................................. 20 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCCGCGGGCTT.......................................................................... 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGAGGTGT..................................................................................................................... 27 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTCTGCAGCTCAGC................................................................................ 21 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTACTTCCTTGTGCAGCTCTGCGGT............................................................................. 25 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ACTTCCTTGTGCAGCTCAGCGGGCTT.......................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTCCTTGTGCAGCTCAGCGGGCTT.......................................................................... 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCAGGC............................................................................ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCA.................................................................................. 19 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCGGTGCTGCTGCAGTCGAGGT....................................................................................................................... 25 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CTGTTACTCAGTGCTGCTGCAGTCGA.......................................................................................................................... 26 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTACTCATTGCTGCTGCAGTCGAGG........................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCCGCAGTCGAGG........................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAG.............................................................................................................................. 20 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGGCTTCG........................................................................ 29 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTACTCAGTGCTGCTGCAGTCG........................................................................................................................... 24 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGCG............................................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCATCTCAGCGGGC............................................................................ 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGTTGAGG........................................................................................................................ 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CTTTTACTCAGTGCTGCTGCAGTCGAG......................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCAGGCG........................................................................... 26 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGTCT........................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTCGTGCAGCTCAGCGGGC............................................................................ 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGGCTTA......................................................................... 28 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGACTTCCTTGTGCAGCTCAGCGG.............................................................................. 24 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGCTTCCTTGTGCAGCTCAGCGG.............................................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGTC............................................................................ 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....TTTTACTCAGTGCTACTGCAGTCG........................................................................................................................... 24 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CTTCCTTGTGCAGCTCAGCGGGCTT.......................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGGCG........................................................................... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGAA......................................................................................................................... 23 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TATTTCCTTGTGCAGCTCAGCGG.............................................................................. 23 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TCCTTGTGCAGCTCAGCGG.............................................................................. 19 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTACTCAGTGCTGCTGCAGTCGC.......................................................................................................................... 24 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ACTTCCTTGTGCAGCTCAGCGGG............................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCAGTCGCG......................................................................................................................... 23 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTATGCAGCTCAGCGG.............................................................................. 23 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTCGTGCAGCTCAGCGGG............................................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................TGCCGTGTCTTTGGCTACTTCCTTGTGC........................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCTTTGGCTACTTCCTTGTGCAGCTC................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCCGCGG.............................................................................. 23 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCAGA............................................................................................................................. 20 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTACTTCCTTGTGCAGCTCAGCGGG............................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTCTGCAGCTCAGCG............................................................................... 22 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTCAGCGGGCTC.......................................................................... 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTCCTTGTGCAGCTCAGCGGGT............................................................................ 22 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TACTTCCTTGTGCAGCTAAAC................................................................................ 21 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TACTCAGTGCTGCTGCATTCGAG......................................................................................................................... 23 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................ATGCCGTGTCTTTGGCTACTTCCTTG........................................................................................... 26 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................TGCCGTGTCTTTGGCTACTTCCTTA........................................................................................... 25 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTACTCAGTGCTGCTGCATG............................................................................................................................. 20 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................ATGCCGTGTCTTTAGCTACTTCCTTG........................................................................................... 26 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............TGATGATGCAGTAGAGGTGA..................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TGCCGTGTCTTTGGCTACTTCCTTGT.......................................................................................... 26 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................GTCTTTGGCTACTTCCTTGT.......................................................................................... 20 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCTTTGGCTATTTCCCTG........................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCCAAAAATGAGTCACGACGACGTCAGCTCCACTTACGGCACAGAAACCGATGAAGGAACACGTCGAGTCGCCCGAAGCCGAATCGAAAGACATATCTAAATCTTCACAAATATTGAGGAAATACAAAAAATGATCGTCCGTCCAGCGCAA
***********************************....((.........((((((..(((((((...(((.(((....)))..)))..)))))))......))))))......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 M027
male body		 SRR060674
9x140_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060673
9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060656
9x160_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 SRR060689
160x9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
.....................................GGCACAGAAACCGATGAAGGAAC........................................................................................... 23 0 7 6.43 45 18 6 1 0 3 3 2 3 2 1 1 1 0 0 1 0 0 0 0 0 0 1 1 0 1
......................................GCACAGAAACCGATGAAGGAAC........................................................................................... 22 0 7 5.86 41 8 7 4 4 4 2 2 1 0 1 3 0 1 0 2 0 1 0 1 0 0 0 0 0 0
...................................ACGGCACAGAAACCGATGAAGGAAC........................................................................................... 25 0 6 5.33 32 8 6 5 1 0 3 4 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0
....................................CGGCACAGAAACCGATGAAGGAAC........................................................................................... 24 0 7 4.86 34 8 4 1 14 3 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCGAAAGACATATCTAAATCTTCACA.......................................... 26 0 3 3.67 11 7 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CACAGAAACCGATGAAGGAAC........................................................................................... 21 0 7 2.86 20 1 3 0 1 4 0 0 1 1 3 1 2 1 0 1 0 0 0 0 0 0 0 0 1 0
....................................................................................CGAAAGACATATCTAAATCTTCACA.......................................... 25 0 3 2.33 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCGAAAGACATACCTAAATCTTCACA.......................................... 26 1 3 1.00 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TTAACGGCACAGAAACCGATGAAGGAAC........................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AATCGAAAGACATATCTAAATCTTCACA.......................................... 28 0 3 1.00 3 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................TTACGGCACAGAAACCGATGAAGGAAC........................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................ACAGAAACCGATGAAGGAAC........................................................................................... 20 0 7 0.86 6 0 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................CGGCACAGAAACCGATGAAGGAA............................................................................................ 23 0 7 0.71 5 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCGAAAGACATATCTAAATCTTCAC........................................... 25 0 3 0.67 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GTCGCCCGAAGCCGAATCGAAAGA............................................................ 24 0 3 0.67 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CGAAAGACATATCTAAATCTTCACAA......................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................AGCCGAATCGAAAGACATATC...................................................... 21 0 3 0.67 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................ACAGAAACCGATGAAGGAACACG........................................................................................ 23 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................AGGAAATACAAAAAATGATCGTC............ 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................ATCGAAAGACATATCTAAATCTTCAC........................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CCGAAGCCGAATCGAAAGA............................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CGCCCGAAGCCGAATCGAAAGA............................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATGTCGCCCGAAGCCGAATCGAAAGA............................................................ 26 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TTCGAAAGACATACCTAAATCTTCACA.......................................... 27 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTCGCCCGAAGCCGAATC.................................................................. 19 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TACGGCACAGAAACCGATGAAGGAAC........................................................................................... 26 0 6 0.33 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................GTCGCCCGAAGCCGAATCGAAA.............................................................. 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CCCGAAGCCGAATCGAAAGACATAT....................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................ATCGAAAGACATATCTAAATCTTCACAA......................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CGAAAGACATATCTAAATCTTC............................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AATCGAAAGACATACCTAAATCTTCACA.......................................... 28 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................ATCGAAAGACATATCTAAATCTTCACA.......................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GAAAGACATACCTAAATCTTCACA.......................................... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CGAAGCCGAATCGAAAGACATAT....................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TATCGAAAGACATATCTAAATCTTCACA.......................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CGAGTCGCCCGAAGCCGAATCG................................................................. 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCGAAAGACATATCTAAATCTTCA............................................ 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AAAGACATATCTAAATCTTCACA.......................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CGAAAGACATACCTAAATCTTCACA.......................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................AGAAACCGATGAAGGAAC........................................................................................... 18 0 7 0.29 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................GGCACAGAAACCGATGAAGGA............................................................................................. 21 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GGCACAGAAACCGATGAAGGAA............................................................................................ 22 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGGCACAGAAACCGATGAAGGAAC........................................................................................... 24 1 7 0.29 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GAAACCGATGAAGGAACAC......................................................................................... 19 0 7 0.29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................CAGAAACCGATGAAGGAACACG........................................................................................ 22 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................GGCACAGAAACCGATGAAGGAACACG........................................................................................ 26 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................ACGGCACAGAAACCGATGAAGGAACACG........................................................................................ 28 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................ACGGCACAGAAACAGATGAAGGAACACG........................................................................................ 28 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................ACAGAAACCGATGAAGGAACTCG........................................................................................ 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................AGAAACCGATGAAGGAACACG........................................................................................ 21 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................ACGGAACAGAAACCGATGAAGGAAC........................................................................................... 25 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AACGGCACAGAAACCGATGAAGGAAC........................................................................................... 26 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................ACGGCACAGAAACCGATGAAGGAA............................................................................................ 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TGTACGGCACAGAAACCGATGAAGGAAC........................................................................................... 28 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................GCACAGAAACCGATGAAGGAACC.......................................................................................... 23 1 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GGGCACAGAAACCGATGAAGGAAC........................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................AGGCACAGAAACCGATGAAGGAAC........................................................................................... 24 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CCGGCACAGAAACCGATGAAGGAAC........................................................................................... 25 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CGCACAGAAACCGATGAAGGAAC........................................................................................... 23 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GGCACAGAAACCGATGAAG............................................................................................... 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GGCACAGAAATCGATGAAGGAAC........................................................................................... 23 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTCGGCCCAGAAACCGATGAAGGAAC........................................................................................... 26 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................CAGAAACCGATGAAGGAAC........................................................................................... 19 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AGATTGAGGAAATACAGAAG..................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13050:2029176-2029326 - dvi_259 CGGTTTTTACTCAGTGCTGCTGCAGTCGAGGTGAATGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-GTGCAGCTCAGCGGGCT--TCGGCTTAGCTTTCTGTATAGATT------------------TAGA-AGTGTTTATAACTCCTTTAT-GTTTTTTACTAGCAGGCAGGTCGCGTT
droMoj3 scaffold_6500:27873136-27873287 + CGATTGCTATAATTAGCTGCCGAGGAAGATGCAGCAGGGC---TTT-------TGGTTAGGCTC---------------CCAAAAT-TTACGCTA-AGTT---GGGCTGGCTTAATTTTGCGGATTGTTT------------------TTGA-CAGTTTGTCCGCTTTTTTTATGTTTTTTCGAGACAGCCAGCTTAGTAG
droWil2 scf2_1100000003657:2457-2616 - CGATTATTTCGGAGCGCAGCCGAAGAGGTAGTAGCAGTTGAATT--TCTGGAAAGTTTT--------TGTAGTT-GTT-GTT---TGTT----ATGAGCATCTG--AGCCAGTACTCTTTTCTAGTAGTT------------------TTGA-GGCTTTGTCGCCTCTTTTTT-GTTTTTTACAAGGAGGGGCTCTAGGCA
dp5 Unknown_singleton_3490:7347-7494 - CGATTATTTAGAAGTGCTACTGAAGGGGTAGTAACAGGTGT---AA-------AATTTTGGCGGCCCTTGAATGGGTG-AT----TTTT----TGGAATATCTG--GGTGTGTAGTTTTTTGAATTGTTT------------------TTGA-GACTTTATCAGCTCTTTTTT-GCTTTTTACTAATA------------G
droPer2 scaffold_71:173333-173479 - CGATTATTTAGAAGTACTACTGAAGGGGTAGTAGCAGGTGT---AA-------AATTTTGGCGGCCCTTGAATGGGTG-AT----T-TT----TGGAATAGCTG--GGTGTGTAGTTTTTTGAATTGTTT------------------TTGA-GACTTTATCAGCTCTTTTTA-GCTTTTTACTAATA------------G
droAna3 scaffold_13137:381070-381215 - CGATTGTTACCCAATGCCTTTGCAGAGGAAGAATCAGCC---------------------------------------GTCTTGTT-GAGCGGGGTTGAGGTCT--GAAACTTAGCTTTACGGATCGGGGGTGGAGTGAGAGCAAA------------TAGTCACGTCTATGC-GTTTTCGACTGCCATTTCGTCCAGGAG
droBip1 scf7180000394959:9823-9979 + CGATTGTTACTCAATGCGTTTGCAGAGGAAGAATCGGCC---------------------------------------GGCTTGTT-GATCGCCGTTGTGGTCA--GCAACTTAGTTTTGCGGATCGGGGGCGGAGTGCAGACAGGTAAAGAGGGCT-GAGCCACGTCTTTTC-TTTTTTGACTGACTTTTCGTCCAGGAG
droKik1 scf7180000302768:24473-24616 - CGATTATTTTCAAGTGCAGCTAAGGAGGTAGTAGCTGAT----TAT-------TGTTTTGGCGTCCCTTGGTTTGGTC-AT-------------------------ATGGTTTGGACTTGTGAATTACTT------------------TGGA-TACTTTGTCAACTCTCTTTT-TATTTTTTAGGAGGGAGATCCTTGGCA
droFic1 scf7180000453944:10053-10197 + CGATTGTTTTGAAGTTCAGCTAAGGAGGTAGTAGCTGTTGT---GT-------TGTTTTGACGTCCCTTTGTTAGGTC-GT-------------------------ATGGTTTGGCCTTGTGAATTATTT------------------CTGT-TGCTTTGTCAGCTCTCTTCT-TATTTTTTGGAAGAGGGATCCTAGGCA
droEle1 scf7180000490546:4114-4270 + CGATTGTCCCCCAAACGCGCGGCAGTGGATGTAGAGGCC---------------------------------------GCCTCATT-AGGAGGCACAGTGATCT--GCCGCTTAGTTTTGCGGTTCGGAGGGGGAGTGAGGATAGATAAAGGGGACT-GAGTCACACCTTTGC-GTTTCCTGTGGACATTACGATCTTGTG
droRho1 scf7180000763918:24590-24740 + CGGTTATTACTTAGTGCCGCTGTCTTGGAGGTGGATGTCGAATA--A--------TCAAGTC----------------TCCTCCTT-GGGCT-TTTCGCGACCT--TCAGCTTAGCTTTAGTAATAGTTT------------------TGGC-TGGGCTTGCAGAAACTTTAA-GCTTCTTGCTTACGAGCTGCTCATGGG
droBia1 scf7180000302168:125812-125944 - CGATTGTCAGCCAATGCCTTAGCAGAAGAAGAATTGGCC---------------------------------------GGCTTGTT-AAGCGACACTGTGGCCT--GCAACTTAGTTTTGCGGACCGGGG------------------------GCG-GAGTAACTTCTTTGC-GTTTTCGGCTGACATTTCGTCCAGGAA
droTak1 scf7180000413742:591-746 - CGATTGTCCCCCAAACGCGCGGCAGTGGATGTAGAGGCC---------------------------------------GCCTCATT-AGGAGGCACAGTGATCT--GCCGCTTAGTTTTGCGGTTCGGAGG-GGAGTGAGGATAGATAAAGGGGACT-GAGTCACACCTTTGC-GTTTCCTGTGGACATTACGATCTTGTG
droEug1 scf7180000409541:2043-2174 + CGATTGTTACCCAATGTCTTTGCAGAATAATGATCGGCC---------------------------------------GTCTTGTT-GAGCGGCATAGTGGCCT--GAACCTTAGTTTTCGGGTCA-GG------------------------GGCG-TGGCCACGCCTTTAC-GTTTTCGGTTGACATTTCGCTCAGAAG
dm3 chr2L:4922361-4922517 + CGATTGTTATTTAATGCTGCTGCAGTGGAGGTAGAGGCC---------------------------------------TCCTCATT-GAGTGGCATAGTGGCCT--GCCTTTTAGTTTTACGGCTTGGAGAAGGGGTGAGGATAGGTAATGGGGGCT-GAGACACGCCTTTTC-GTTTCCTGTTGACAGTACGATCATGTG
droSim2 2r:3142496-3142640 + CGGTTATTACTTAGTGAAGACAATGAGGGTGT------TTCAAC--TT--------T----------------AGATG-GCATCTT-CAGCGGCTGAGAAACCT--GCTTCTTAGTTTTCTGATCTTTTT------------------GAAA-TGTACTTGAGTTTCCCTTAC-GTTTCCTGCCTTCAGGTATGACTGATT
droSec2 scaffold_71:122975-123116 - CTGTTATTATTAAGTTAAGACATTGAGGGTG------TCTCAAC--AC--------T----------------AGATG-GCATCTT-CTGCGGCTGAGAAGCCT--GTTTCTTAGTTTTCAGATTTTTTT------------------AAAA-CGCACTTGAATTTCCCTTAC-GTTTTCTGCCTACAGGT---ATGACTG
droYak3 v2_chrUn_3278:6269-6401 - CTGTTGTTACTTAGTGTGGGCAGGGAGCGTG------CCTCATC--TT--------T----------------AGATG-GGAACTT-CTGCGGCTGAGGAGCCT--GCTTCTTGGATTTGTCTTTCTGA---------------------C-------AACTATTCCCTTTAC-GCTTTCTGCCCACAGAT---ATAAGTG
droEre2 scaffold_4784:23278473-23278614 - CGATTATTGCTAAGTGAAGACAATGAGGGTG------TCTCAAC--AT--------T----------------AGATG-GCATCTT-CTGCAGCTGAGACGCCT--GCTTTTTAGTTTTCTGATCTTTTT------------------GAAA-CGTAATTGTGTTTCCCTTAT-GTTTTCTGCCCTC---ACGTATGACTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CGGTTTTTACTCAGTGCTGCTGCAGTCGAGGTGAATGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-GTGCAGCTCAGCGGGCT--TCGGCTTAGCTTTCTGTATAGATT------------------TAGA-AGTGTTTATAACTCCTTTAT-GTTTTTTACTAGCAGGCAGGTCGCGTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGC..................................................................................................25438.25153861237301000000000000000001411310003122103000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGG...................................................................................................24415.756300160001000003000000010013910240000015250000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGG....................................................................................................2348.7535008000000000100000000002238210000111122000000000000000000000000
....TTTTACTCAGTGCTGCTGCAGTCG.............................................................................................................................................................................2445.7523002000200000000000000003052000001131111000000000000000000000000
.....TTTACTCAGTGCTGCTGCAGTCGAGG..........................................................................................................................................................................2645.50220010000000000000000000000203200000002003000000000000000000000000
....TTTTACTCAGTGCTGCTGCAGTCGAGG..........................................................................................................................................................................2745.5022009000000000000000000000135100000011010000000000000000000000000
......TTACTCAGTGCTGCTGCAGTCGAGG..........................................................................................................................................................................2544.75190012000000000000000000000012100000100101000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCGAG...........................................................................................................................................................................2344.5018001030100000000000000000022120000001203000000000000000000000000
.....TTTACTCAGTGCTGCTGCAGTCG.............................................................................................................................................................................2344.0016000020001000000000000004101100002000004000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGC......................................................................................................2143.7515003000000000000000000003322000000001001000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGCT--...............................................................................................2643.5014902000000000000000000000021000000000000000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCG.............................................................................................................................................................................2143.5014001020100000000000000002110010003001010000000000000000000000000
......TTACTCAGTGCTGCTGCAGTCG.............................................................................................................................................................................2243.5014002020000000000000000001212010000012000000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCG.....................................................................................................2243.2513012000000000000000000001111010002001110000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGCT--T..............................................................................................2742.7511208000000000000000000000000000000000100000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGCT--TC.............................................................................................2842.5010204000100000000000000000000020000001000000000000000000000000000
.....TTTACTCAGTGCTGCTGCAGTC..............................................................................................................................................................................2242.259000010100000000000000001100000000001013000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCGAGG..........................................................................................................................................................................2442.008005000000000000000000000101000000001000000000000000000000000000
......TTACTCAGTGCTGCTGCAGTCGAG...........................................................................................................................................................................2442.008003010100000000000000000000000000001101000000000000000000000000
.......TACTCAGTGCTGCTGCAGTC..............................................................................................................................................................................2042.008000000300000000000000000000210000011000000000000000000000000000
....TTTTACTCAGTGCTGCTGCAGTCGAG...........................................................................................................................................................................2641.757000000000000000000000000132100000000000000000000000000000000000
.....TTTACTCAGTGCTGCTGCAGTCGAG...........................................................................................................................................................................2541.757000000000000000000000000100100001001003000000000000000000000000
....TTTTACTCAGTGCTGCTGCAGTCGA............................................................................................................................................................................2541.757002000000000000000000000110100000000101000000000000000000000000
....TTTTACTCAGTGCTGCTGCAGTC..............................................................................................................................................................................2341.506000000100000000000001002200000000000000000000000000000000000000
.....TTTACTCAGTGCTGCTGCAGT...............................................................................................................................................................................2141.255002001000000000000000000000010000001000000000000000000000000000
................................................................................TTCCTT-GTGCAGCTCAGCGG....................................................................................................2041.255000000003000000000000001000000000000001000000000000000000000000
......TTACTCAGTGCTGCTGCAGTC..............................................................................................................................................................................2141.255002010000000000000000000100000000000001000000000000000000000000
.................................................................................................................................................................................TTTTACTAGCAGGCAGGTCGCGT.2311.001000000000000000000000000000000000000100000000000000000000000000
......TTACTCAGTGCTGCTGCAGTCGA............................................................................................................................................................................2341.004002000000000000000000000011000000000000000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCGAGGTG........................................................................................................................................................................2641.004000000000000000000000000101000100000000100000000000000000000000
....TTTTACTCAGTGCTGCTGCAG................................................................................................................................................................................2141.004001000000000000000000001002000000000000000000000000000000000000
................................................................................TTCCTT-GTGCAGCTCAGCGGGC..................................................................................................2241.004000100000000000000000003000000000000000000000000000000000000000
.....TTTACTCAGTGCTGCTGCAGTCGA............................................................................................................................................................................2440.753000000000000000000000000100000000000002000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCGAGGT.........................................................................................................................................................................2540.753000000000000000000000000000010000001001000000000000000000000000
................................................................................TTCCTT-GTGCAGCTCAGCGGGCT--TC.............................................................................................2540.753002000000000000000000000010000000000000000000000000000000000000
......TTACTCAGTGCTGCTGCAGTCGAGGT.........................................................................................................................................................................2640.502000000000000000000000000100000000000001000000000000000000000000
......TTACTCAGTGCTGCTGCAGTCGAGGTG........................................................................................................................................................................2740.502000000000000000000000000000100000000100000000000000000000000000
.............................................................................A-CTTCCTT-GTGCAGCTCAGCGGGC..................................................................................................2440.502002000000000000000000000000000000000000000000000000000000000000
................................................................................TTCCTT-GTGCAGCTCAGCGGGCT--TCG............................................................................................2640.502000000001000000000000000010000000000000000000000000000000000000
.............................................................................A-CTTCCTT-GTGCAGCTCAGCGGGCT--TC.............................................................................................2740.502001100000000000000000000000000000000000000000000000000000000000
....TTTTACTCAGTGCTGCTGCAGT...............................................................................................................................................................................2240.502000000000000000000000000000000000001010000000000000000000000000
.................................................................................................................................................................TAACTCCTTTAT-GTTTTTTACTAGCAG............2720.501000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................T------------------TAGA-AGTGTTTATAACTCCT................................2120.501000000000000000000000000000000000000001000000000000000000000000
...................................TGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-GTG...............................................................................................................2760.503000000000000000000000000000010010000010000000000000000000000000
.......TACTCAGTGCTGCTGCAGT...............................................................................................................................................................................1940.502000000000000000000001000000000000000010000000000000000000000000
......TTACTCAGTGCTGCTGCAGT...............................................................................................................................................................................2040.502000000000000000000000000010000000000100000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCGA............................................................................................................................................................................2240.502001000000000000000001000000000000000000000000000000000000000000
...................................TGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-G.................................................................................................................2560.332001000000000000000000000000010000000000000000000000000000000000
..............................................................................................................CTTAGCTTTCTGTATAGATT------------------TAGA-AG..............................................2630.331000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTCTGTATAGATT------------------TAGA-AGTG............................................2130.331000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................TTAGCTTTCTGTATAGATT------------------TAGA-AGTGT...........................................2830.331001000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAGCTTTCTGTATAGATT------------------TAGA-AGT.............................................2530.331000000000000000000000000001000000000000000000000000000000000000
................................................................................TTCCTT-GTGCAGCTCAGCGGGCT--TCGG...........................................................................................2730.331000000001000000000000000000000000000000000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAG.......................................................................................................2040.251000000000000000000000001000000000000000000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCGAGGTGT.......................................................................................................................................................................2740.251000000000000000000000000000000000000100000000000000000000000000
.............................................................................A-CTTCCTT-GTGCAGCTCAGCGGGCT--T..............................................................................................2640.251001000000000000000000000000000000000000000000000000000000000000
................................................................................TTCCTT-GTGCAGCTCAGCGGGCT--T..............................................................................................2440.251000000000000000000000000000000000000100000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCA........................................................................................................1940.251000000000000000000000000000000000000001000000000000000000000000
.....TTTACTCAGTGCTGCTGCAG................................................................................................................................................................................2040.251000000000000000000000000000000000001000000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGCT--TCG............................................................................................2940.251000000000000000000000000010000000000000000000000000000000000000
......TTACTCAGTGCTGCTGCAGTCT.............................................................................................................................................................................2240.251001000000000000000000000000000000000000000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGCT--TA.............................................................................................2840.251000000000000100000000000000000000000000000000000000000000000000
...............................................................................CTTCCTT-GTGCAGCTCAGCGGGCT--T..............................................................................................2540.251001000000000000000000000000000000000000000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGCG--...............................................................................................2640.251100000000000000000000000000000000000000000000000000000000000000
.......TACTCAGTGCTGCTGCAGTCGAA...........................................................................................................................................................................2340.251000000000000000000000000000000000000100000000000000000000000000
.................................................................................TCCTT-GTGCAGCTCAGCGG....................................................................................................1940.251000000100000000000000000000000000000000000000000000000000000000
.....TTTACTCAGTGCTGCTGCAGTCGC............................................................................................................................................................................2440.251000000000000000000000000000000000000001000000000000000000000000
.............................................................................A-CTTCCTT-GTGCAGCTCAGCGGG...................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
...................................TGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-GTGC..............................................................................................................2840.251001000000000000000000000000000000000000000000000000000000000000
..........................................TC--TT--------T----------------GGCTA-CTTCCTT-GTGCAGCTC.........................................................................................................2640.251001000000000000000000000000000000000000000000000000000000000000
......TTACTCAGTGCTGCTGCAGA...............................................................................................................................................................................2040.251001000000000000000000000000000000000000000000000000000000000000
...........................................................................CTA-CTTCCTT-GTGCAGCTCAGCGGG...................................................................................................2540.251001000000000000000000000000000000000000000000000000000000000000
............................................................................TA-CTTCCTT-GTGCAGCTCAGCGGGCT--C..............................................................................................2740.251100000000000000000000000000000000000000000000000000000000000000
................................................................................TTCCTT-GTGCAGCTCAGCGGGT..................................................................................................2250.201000000000000000000000001000000000000000000000000000000000000000
..................................ATGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-G.................................................................................................................2660.171000000000000000000000000000000000000000000000000000000000000001
...................................TGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-A.................................................................................................................2560.171000000000000000000000000100000000000000000000000000000000000000
......TTACTCAGTGCTGCTGCATG...............................................................................................................................................................................2060.171001000000000000000000000000000000000000000000000000000000000000
...................................TGCCGTGTC--TT--------T----------------GGCTA-CTTCCTT-GT................................................................................................................2660.171000000000000000000000000000010000000000000000000000000000000000
.........................................GTC--TT--------T----------------GGCTA-CTTCCTT-GT................................................................................................................2070.141000000000000000000000000000010000000000000000000000000000000000
droMoj3
CGATTGCTATAATTAGCTGCCGAGGAAGATGCAGCAGGGC---TTT-------TGGTTAGGCTC---------------CCAAAAT-TTACGCTA-AGTT---GGGCTGGCTTAATTTTGCGGATTGTTT------------------TTGA-CAGTTTGTCCGCTTTTTTTATGTTTTTTCGAGACAGCCAGCTTAGTAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................ATTTTGCGGATTGTTT------------------TTGA-CAGTT...........................................2550.201000001
..................................CAGGGC---TTT-------TGGTTAGGCTC---------------C.........................................................................................................................2150.201000010
....................................................................................................................TTTGCGGATTGTTT------------------TTGA-CAGTTTG.........................................2550.201010000
droWil2
CGATTATTTCGGAGCGCAGCCGAAGAGGTAGTAGCAGTTGAATT--TCTGGAAAGTTTT--------TGTAGTT-GTT-GTT---TGTT----ATGAGCATCTG--AGCCAGTACTCTTTTCTAGTAGTT------------------TTGA-GGCTTTGTCGCCTCTTTTTT-GTTTTTTACAAGGAGGGGCTCTAGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................TAGCAGTTGAATT--TCTGGAAAGTTTT--------......................................................................................................................................26113.0013000130
........................................................................................................................TCTAGTAGTT------------------TTGA-GGCTTTGTCGCCT...................................2719.00901080
......................................................................................................................TTTCTAGTAGTT------------------TTGA-GGCTTTGT........................................2419.00900090
........................................................................................................................................................................TTTTT-GTTTTTTACAAGGAGGGGC........2416.00600060
......................................................................................................................TTTCTAGTAGTT------------------TTGA-GGCTTTGTCG......................................2616.00600060
.............................................................................T-GTT---TGTT----ATGAGCATCTG--AGCCAG.........................................................................................2515.00502030
........................................................................................................................TCTAGTAGTT------------------TTGA-GGCTTTGTCGC.....................................2515.00500050
................................................TGGAAAGTTTT--------TGTAGTT-GTT-GT........................................................................................................................2314.00400040
.......................................................................................................................................................................TTTTTT-GTTTTTTACAAGGAGGGGC........2514.00400040
......................................TGAATT--TCTGGAAAGTTTT--------TGTAGT................................................................................................................................2513.00300030
...........................................T--TCTGGAAAGTTTT--------TGTAGTT-GTT-G.........................................................................................................................2513.00300030
........TCGGAGCGCAGCCGAAGAGG.............................................................................................................................................................................2013.00300030
.....................................................................................................................................................................TCTTTTTT-GTTTTTTACAAGGAGGGGC........2713.00300030
.........................................................................T-GTT-GTT---TGTT----ATGAGCATCTG--AGC............................................................................................2513.00300030
......................................................................................................TG--AGCCAGTACTCTTTTCTAGTAGT........................................................................2513.00300030
..............................................TCTGGAAAGTTTT--------TGTAGTT-GTT-G.........................................................................................................................2413.00300030
............................................................................................................................................................................T-GTTTTTTACAAGGAGGGGCTCTAGG..2613.00300030
......................AAGAGGTAGTAGCAGTTGAATT--TCTG.......................................................................................................................................................2613.00300030
.......TTCGGAGCGCAGCCGAAGAGGTAG..........................................................................................................................................................................2413.00300030
....TATTTCGGAGCGCAGCCGAAGAGG.............................................................................................................................................................................2413.00300030
.......TTCGGAGCGCAGCCGAAGAGGTAGT.........................................................................................................................................................................2512.00200020
..........................................................................................................................TAGTAGTT------------------TTGA-GGCTTTGTCGC.....................................2312.00201010
................................................TGGAAAGTTTT--------TGTAGTT-GTT-GTT---....................................................................................................................2412.00200020
......................................TGAATT--TCTGGAAAGTTTT--------TGTAGTT-G.............................................................................................................................2712.00200020
............................TAGTAGCAGTTGAATT--TCTGGAAAG..................................................................................................................................................2512.00200020
..........................................................T--------TGTAGTT-GTT-GTT---TGTT----ATGAGC......................................................................................................2412.00200020
........................................................................................................................TCTAGTAGTT------------------TTGA-GGCTTTGTCG......................................2412.00200020
........................................................................................................................................................................TTTTT-GTTTTTTACAAGGAGGGGCTC......2612.00200020
.........................................................TT--------TGTAGTT-GTT-GTT---TGTT----ATGAGC......................................................................................................2512.00200020
....................................................................................................TCTG--AGCCAGTACTCTTTTCTAGTA..........................................................................2512.00200020
....TATTTCGGAGCGCAGCCGAAGAGGTAG..........................................................................................................................................................................2712.00201010
...................................................................................................................TCTTTTCTAGTAGTT------------------TTGA-GGCTTTGT........................................2712.00200020
........TCGGAGCGCAGCCGAAGAGGTAGTAG.......................................................................................................................................................................2611.00101000
.......................................................................................................................................................................TTTTTT-GTTTTTTACAAGGAGGGG.........2411.00100010
.......................................................................................................................................................................TTTTTT-GTTTTTTACAAGGAGGGGCTA......2711.00100010
..............................................................................................................................................................TGTCGCCTCTTTTTT-GTTTTTTACAA................2611.00101000
.............................................................................................................................TAGTT------------------TTGA-GGCTTTGTCGCCT...................................2211.00100010
...........................................................................................................................AGTAGTT------------------TTGA-GGCTTTGTCGCCT...................................2411.00100010
.....ATTTCGGAGCGCAGCCGAAGAGG.............................................................................................................................................................................2311.00101000
..........................................................T--------TGTAGTT-GTT-GTT---TGTT----ATGAGCA.....................................................................................................2511.00100010
......................................................................................................TG--AGCCAGTACTCTTTTCTAGTAGTT------------------.....................................................2611.00100010
......................................................................................................................TTTCTAGTAGTT------------------TTGA-GGCTTTGTC.......................................2511.00100010
.....................................................................................................................TTTTCTAGTAGTT------------------TTGA-GGCTTTGT........................................2511.00100010
..............................................TCTGGAAAGTTTT--------TGTAGTT-GTT-GT........................................................................................................................2511.00100010
....................CGAAGAGGTAGTAGCAGTTGAATT--TCA........................................................................................................................................................2711.00100010
....................................................................................................TCTG--AGCCAGTACTCTTTTCTAGTAGTT------------------.....................................................2811.00101000
....................CGAAGAGGTAGTAGCAGTTGAATT--TCT........................................................................................................................................................2711.00100010
..........................................................T--------TGTAGTT-GTT-GTT---TGTT----ATGAG.......................................................................................................2311.00100010
.........................................ATT--TCTGGAAAGTTTT--------TGTAGTT-GT............................................................................................................................2511.00100010
.......TTCGGAGCGCAGCCGAAGAGGTA...........................................................................................................................................................................2311.00100010
........................................................................................................................................................................TTTTT-GTTTTTTACAAGGAGG...........2111.00100010
......................................................................AGTT-GTT-GTT---TGTT----ATGAGCAT....................................................................................................2211.00101000
.....................GAAGAGGTAGTAGCAGTTGAATT--TC.........................................................................................................................................................2511.00110000
....................................................................................................................CTTTTCTAGTAGTT------------------TTGA-GGC.............................................2111.00100010
...........................................T--TCTGGAAAGTTTT--------TGTAGTT-G.............................................................................................................................2211.00100010
............................................................................................................................................................................T-GTTTTTTACAAGGAGGT..........1811.00100010
....TATTTCGGAGCGCAGCCGAAGAG..............................................................................................................................................................................2311.00101000
.......TTCGGAGCGCAGCCGAAGAGGTAGTAG.......................................................................................................................................................................2711.00100010
.........................................................................................................................................................................TTTT-GTTTTTTACAAGGAGGGGCTA......2511.00100010
..........................................................................................................................TAGTAGTT------------------TTGA-GGCTTTGTCGCCT...................................2511.00100010
.........................................................................T-GTT-GTT---TGTT----ATGAGCATCTG--AGCCAG.........................................................................................2811.00100010
................................................................................................................TACTCTTTTCTAGTAGTT------------------TTGA-GGC.............................................2511.00101000
...................................................................TGTAGTT-GTT-GTT---TGTT----ATGAGCAA....................................................................................................2511.00100010
.......................AGAGGTAGTAGCAGTTGAATT--TCT........................................................................................................................................................2411.00100010
......................................................................................GTT----ATGAGCATCTG--AGCCAGT........................................................................................2111.00101000
....TATTTCGGAGCGCAGCCGAAGAGGT............................................................................................................................................................................2511.00100010
.........CGGAGCGCAGCCGAAGAGGTAGT.........................................................................................................................................................................2311.00100010
...................................................................TGTAGTT-GTT-GTT---TGTT----ATGAGC......................................................................................................2311.00100010
.............................................................................T-GTT---TGTT----ATGAGCATCTG--AGCCA..........................................................................................2411.00100010
..........................................................................................................................................................................TTT-GTTTTTTACAAGGAGGG..........2011.00100010
.....................................................................................................CTG--AGCCAGTACTCTTTTCTAGTA..........................................................................2411.00100010
.............................AGTAGCAGTTGAATT--TCTGGAAAGT.................................................................................................................................................2511.00100010
.....................GAAGAGGTAGTAGCAGTTGAATT--TCT........................................................................................................................................................2611.00100010
......................................................................................................................TTTCTAGTAGTT------------------TTGA-GGCTTTGTCGC.....................................2711.00100010
........................................................................................................................TCTAGTAGTT------------------TTGA-GGCTTTGTCGCC....................................2611.00100010
............................................................................................................................................................................T-GTTTTTTACAAGGAGGGGCTCTAG...2511.00100010
...................................................................TGTAGTT-GTT-GTT---TGTT----ATGAGCAAAA..................................................................................................2711.00100010
.....................................................................................TGTT----ATGAGCATCTG--AGCCAGTACT.....................................................................................2511.00100010
........................................................................................T----ATGAGCATCTG--AGCCAGTACTCT...................................................................................2411.00100010
..........................................................................................................................................................................TTT-GTTTTTTACAAGGAGGGGCT.......2311.00100010
...................................................................TGTAGTT-GTT-GTT---TGTT----ATGAG.......................................................................................................2211.00100010
...................................................................................................................TCTTTTCTAGTAGTT------------------TTGA-GGCTTTG.........................................2611.00100010
.........................................................................................................................................................................TTTT-GTTTTTTACAAGGAGGGGCTC......2511.00101000
.......................AGAGGTAGTAGCAGTTGAATT--TCTGG......................................................................................................................................................2611.00100010
...................................................................TGTAGTT-GTT-GTT---TGTT----ATGAGCATCTA--...............................................................................................2811.00100010
...................................................................TGTAGTT-GTT-GTT---TGTT----ATGAGCA.....................................................................................................2411.00100010
...................................................................TGTAGTT-GTT-GTT---TGTT----ATGAGCATT...................................................................................................2611.00100010
................................................TGGAAAGTTTT--------TGTAGTT-GTT-G.........................................................................................................................2211.00100010
.....................................................................TAGTT-GTT-GTT---TGTT----ATGAGCATCGA--...............................................................................................2611.00100010
dp5
CGATTATTTAGAAGTGCTACTGAAGGGGTAGTAACAGGTGT---AA-------AATTTTGGCGGCCCTTGAATGGGTG-AT----TTTT----TGGAATATCTG--GGTGTGTAGTTTTTTGAATTGTTT------------------TTGA-GACTTTATCAGCTCTTTTTT-GCTTTTTACTAATA------------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...TTATTTAGAAGTGCTACTGAAGGGG.............................................................................................................................................................................2511.0010100000000
.......TTAGAAGTGCTACTGAAGGGG.............................................................................................................................................................................2111.0010100000000
.......................................................................................................................TTGAATTGTTT------------------TTGA-GACTT...........................................2011.0010100000000
.............................AGTAACAGGTGT---AA-------AATTTTG.............................................................................................................................................2111.0010000000100
.........AGAAGTGCTACTGAAGGGGT............................................................................................................................................................................2020.5010100000000
.........AGAAGTGCTACTGAAGGGG.............................................................................................................................................................................1920.5010100000000
droPer2
CGATTATTTAGAAGTACTACTGAAGGGGTAGTAGCAGGTGT---AA-------AATTTTGGCGGCCCTTGAATGGGTG-AT----T-TT----TGGAATAGCTG--GGTGTGTAGTTTTTTGAATTGTTT------------------TTGA-GACTTTATCAGCTCTTTTTA-GCTTTTTACTAATA------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...TTATTTAGAAGTACTACTGAAGGGG.............................................................................................................................................................................2511.001010000
.......................................................................................TT----TGGAATAGCTG--GGTGTGTAGT.....................................................................................2380.635041000
.......................................................................................TT----TGGAATAGCTG--GGTGTGTAG......................................................................................2280.504040000
..................................CAGGTGT---AA-------AATTTTGGCGGCCC......................................................................................................................................2350.402200000
.......................................................................................TT----TGGAATAGCTG--GGTGTGTAGTTTT..................................................................................2630.331010000
.......................................................................................TT----TGGAATAGCTG--GGTGTGTAGTTT...................................................................................2530.331010000
.....................................................................................T-TT----TGGAATAGCTG--GGTGTGTAGTT....................................................................................2530.331010000
........................................................................................T----TGGAATAGCTG--GGTGTGTAGTT....................................................................................2330.331010000
.....................................................................................T-TT----TGGAATAGCTG--GGTGTGTAG......................................................................................2380.252010001
.......................................................................................TT----TGGAATAGCTG--GGTGTGTA.......................................................................................2180.252020000
........................................................................................T----TGGAATAGCTG--GGTGTGTAG......................................................................................2180.131010000
.....................................................................................T-TT----TGGAATAGCTG--GGTGTGTA.......................................................................................2280.131010000
................................................................................................................................TT------------------TTGA-GACTTTATCAGCTCTTTT..............................2490.111010000
.................................................................................................................................T------------------TTGA-GACTTTATCAGCTCTTTT..............................2390.111010000
........................................................................................................................TGAATTGTTT------------------TTGA-GACTTTATCAGC....................................2690.111010000
droAna3
CGATTGTTACCCAATGCCTTTGCAGAGGAAGAATCAGCC---------------------------------------GTCTTGTT-GAGCGGGGTTGAGGTCT--GAAACTTAGCTTTACGGATCGGGGGTGGAGTGAGAGCAAA------------TAGTCACGTCTATGC-GTTTTCGACTGCCATTTCGTCCAGGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......TACCCAATGCCTTTGCAGAGGAAGAATC......................................................................................................................................................................2821.002020000
...............................................................................................................TTAGCTTTACGGATCGGGGGTGG...................................................................2311.001100000
..............TGCCTTTGCAGAGGAAGAATCAGCC---------------------------------------...........................................................................................................................2521.002020000
...............GCCTTTGCAGAGGAAGAATCAGCC---------------------------------------...........................................................................................................................2420.501010000
..............TGCCTTTGCAGAGGAAGAATCAGCC---------------------------------------GT.........................................................................................................................2720.501100000
....................TGCAGAGGAAGAATCAGCC---------------------------------------GTCT.......................................................................................................................2320.501100000
..............TGCCTTTGCAGAGGAAGAATCAGC...................................................................................................................................................................2420.501000010
..................TTTGCAGAGGAAGAATCAGCC---------------------------------------GTCT.......................................................................................................................2520.501100000
..............TGCCTTTGCAGAGGAAGAATCAGCC---------------------------------------GTC........................................................................................................................2820.501100000
........................GAGGAAGAATCAGCC---------------------------------------GTCTTGTT-GA................................................................................................................2530.331100000
........................GAGGAAGAATCAGCC---------------------------------------GTCTTGTT-GAG...............................................................................................................2630.331100000
........................GAGGAAGAATCAGCC---------------------------------------GTCTTGTT-GAGCG.............................................................................................................2830.331100000
.................................................................................TTGTT-GAGCGGGGTTGAGGTCT--G..............................................................................................2370.292200000
..................................................................................TGTT-GAGCGGGGTTGAGGTCT--...............................................................................................2170.141100000
..............................GAATCAGCC---------------------------------------GTCTTGTT-GAGCGGG...........................................................................................................24140.142000020
................................................................................CTTGTT-GAGCGGGGTTGAGGTCT--G..............................................................................................2470.141100000
............................AAGAATCAGCC---------------------------------------GTCTTGTT-GAGCGGGG..........................................................................................................27140.071100000
............................AAGAATCAGCC---------------------------------------GTCTTGTT-GAGCGG............................................................................................................25140.071010000
..............................GAATCAGCC---------------------------------------GTCTTGTT-GAGCGG............................................................................................................23140.071001000
.................................TCAGCC---------------------------------------GTCTTGTT-GAGCGGGGTTGA......................................................................................................26140.071100000
...............................AATCAGCC---------------------------------------GTCTTGTT-GAGCG.............................................................................................................21150.071100000
............................AAGAATCAGCC---------------------------------------GTCTTGTT-GAGC..............................................................................................................23150.071100000
droBip1
CGATTGTTACTCAATGCGTTTGCAGAGGAAGAATCGGCC---------------------------------------GGCTTGTT-GATCGCCGTTGTGGTCA--GCAACTTAGTTTTGCGGATCGGGGGCGGAGTGCAGACAGGTAAAGAGGGCT-GAGCCACGTCTTTTC-TTTTTTGACTGACTTTTCGTCCAGGAGSizeHit CountTotal NormTotal
No Reads
droKik1
CGATTATTTTCAAGTGCAGCTAAGGAGGTAGTAGCTGAT----TAT-------TGTTTTGGCGTCCCTTGGTTTGGTC-AT-------------------------ATGGTTTGGACTTGTGAATTACTT------------------TGGA-TACTTTGTCAACTCTCTTTT-TATTTTTTAGGAGGGAGATCCTTGGCASizeHit CountTotal NormTotal
No Reads
droFic1
CGATTGTTTTGAAGTTCAGCTAAGGAGGTAGTAGCTGTTGT---GT-------TGTTTTGACGTCCCTTTGTTAGGTC-GT-------------------------ATGGTTTGGCCTTGTGAATTATTT------------------CTGT-TGCTTTGTCAGCTCTCTTCT-TATTTTTTGGAAGAGGGATCCTAGGCASizeHit CountTotal NormTotal
No Reads
droEle1
CGATTGTCCCCCAAACGCGCGGCAGTGGATGTAGAGGCC---------------------------------------GCCTCATT-AGGAGGCACAGTGATCT--GCCGCTTAGTTTTGCGGTTCGGAGGGGGAGTGAGGATAGATAAAGGGGACT-GAGTCACACCTTTGC-GTTTCCTGTGGACATTACGATCTTGTGSizeHit CountTotal NormTotal
No Reads
droRho1
CGGTTATTACTTAGTGCCGCTGTCTTGGAGGTGGATGTCGAATA--A--------TCAAGTC----------------TCCTCCTT-GGGCT-TTTCGCGACCT--TCAGCTTAGCTTTAGTAATAGTTT------------------TGGC-TGGGCTTGCAGAAACTTTAA-GCTTCTTGCTTACGAGCTGCTCATGGGSizeHit CountTotal NormTotal
No Reads
droBia1
CGATTGTCAGCCAATGCCTTAGCAGAAGAAGAATTGGCC---------------------------------------GGCTTGTT-AAGCGACACTGTGGCCT--GCAACTTAGTTTTGCGGACCGGGG------------------------GCG-GAGTAACTTCTTTGC-GTTTTCGGCTGACATTTCGTCCAGGAASizeHit CountTotal NormTotal
No Reads
droTak1
CGATTGTCCCCCAAACGCGCGGCAGTGGATGTAGAGGCC---------------------------------------GCCTCATT-AGGAGGCACAGTGATCT--GCCGCTTAGTTTTGCGGTTCGGAGG-GGAGTGAGGATAGATAAAGGGGACT-GAGTCACACCTTTGC-GTTTCCTGTGGACATTACGATCTTGTGSizeHit CountTotal NormTotal
No Reads
droEug1
CGATTGTTACCCAATGTCTTTGCAGAATAATGATCGGCC---------------------------------------GTCTTGTT-GAGCGGCATAGTGGCCT--GAACCTTAGTTTTCGGGTCA-GG------------------------GGCG-TGGCCACGCCTTTAC-GTTTTCGGTTGACATTTCGCTCAGAAGSizeHit CountTotal NormTotal
No Reads
dm3
CGATTGTTATTTAATGCTGCTGCAGTGGAGGTAGAGGCC---------------------------------------TCCTCATT-GAGTGGCATAGTGGCCT--GCCTTTTAGTTTTACGGCTTGGAGAAGGGGTGAGGATAGGTAATGGGGGCT-GAGACACGCCTTTTC-GTTTCCTGTTGACAGTACGATCATGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........TTAATGCTGCTGCAGTGGAGGTAG.......................................................................................................................................................................2417112.65191500000000000000000000044000000000000090902440020190900019000000000000000000000000000000010100000000010000000000000000000000000000000000000000000111000116210301000000000000000000000000000000003150148130018068000001160703030006100215007534334111200000000010000000000000000000000000000000000000000000000000210000222202600000036954800000000000000128261320251000000
..................................................................................................................GTTTTACGGCTTGGAGAAGGG..................................................................211983.001577000000000000000000000301000000000000203020005010001050012010000000000000000000000000000000000000000000000000000000000000000000000000010500002010520120003120000000002000000000000000011020013007016020050570000002000100413200061465145512116855222510200000000000000000000000000000000000000000000001170000001310000114112000040192229002200000150000010386200118011070
..................................................................................................................GTTTTACGGCTTGGAGAAGG...................................................................201976.0014440000000000000000000001010000000000006040100012010000020000000000000000000000000000000000000000000000000000000000000000000000000010010003000040003001100052100000000000000000000010000700000011622300000088000000200000000070161213114293132350110000000000000000000000000000000000000000001000000000000005200004040253000020342977000000000000007897150119000000
..........TTAATGCTGCTGCAGTGGAGGTAGA......................................................................................................................................................................251773.8212550000000000000000000000100000000000001030520091202000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000140214010000000000000000000000000000000004090600205010001140503000003902896110937154268600000000100000000000000000000000000000000000000000000000000190000202401500000029432700000000000000569411174000000
..........TTAATGCTGCTGCAGTGGAGGTA........................................................................................................................................................................231764.94110400000000000000000000015100000000000000201000320020203000000000000000000000000000000000000000000000000000000200000000000000000000001000000000021701102000121000000000000000000000000000000000170400006070000108030000000230381431170374342903000000000200000000000000000000000000000000000000000000000004000000502000000719700000000000000286762500000010
..........TTAATGCTGCTGCAGTGGAGG..........................................................................................................................................................................211749.5384200000000000000000000001100000000000130206200415010003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030500010100101000003201000000000000001002520060030102004120100001010000100190062201211114641510810560000000000001001000200002000000000000000000015291300000071000101719000024027281603241000020100001541221811020260
..................................................................................................................GTTTTACGGCTTGGAGAAGGGG.................................................................221946.68887000000000000000000000010000000000000000000005020000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000020300000000000000000000000001500000006014200000380000000100000000100008801283678835200000000000000000000000000000000000000000000000000002000000180010101901800000099240001000010000057468887000010
..........TTAATGCTGCTGCAGTGGAGGTAGAG.....................................................................................................................................................................261737.53638000000000000000000000020000000000000002050105010102060000000000000000000000000000030000000000000000000000000000000000000000000000000200100000005001020000000000000000000000000100000100000003042000407000000311412080001102946129447461383000000000000000000000000000000000000000000000000000000000001100000307000000141790000000000000018416236300000
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..............................................................................TCCTCATT-GAGTGGCATAGTGGCCT--...............................................................................................251923.47446010000000000000000000210000000000000407022410101100609011000000000000000000000000000003000400000000020000000000000101003000000000000000000000000171021301795501095140000000000000000000000000000000004117041213061000011201115340002000230150126000000000000200000000000000000000000000000000000000000000000200000482001000040000000000000000132179100000
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................................................................................................................TAGTTTTACGGCTTGGAGAAG....................................................................211922.79433000000000000000000000030001000000000000042003010203150000000000000000000000000000000002000000000000000000000001000000000000000000000000000003002400210043430000000020000000000000000000103900150709008018000000412000032260152011071517111000000000000000000000000001000000000000000000001249000000000000121500002101126700234000012000005194501200150
..............................................................................................................................................TAGGTAATGGGGGCT-GAGACACGCCTT...............................271922.58429000000000000000000000122000000000000207042006240202070000210000000000000000001100020000000000000000000000000000000000000000000000000100100007711837125132512147900000000000000000000000000000000000180060206020000901106410003216691180795100000000220000000000100000000000000000000000000000000000000610000312350000001300000000000000004141112600000
..................................................................................................................GTTTTACGGCTTGGAGAAG....................................................................191922.42426000000000000000000000331000000000001402001001501000003000010000000000000000000000000000000000000000000000000000000000000000000000000000000000120400000002300000000000000000000000000030000002901100000024000000000000000048001117028011190000000000000000000000000000000000000000000000000000000000000400001120130000007570000000000000027355035000000
..........TTAATGCTGCTGCAGTGGAGGT.........................................................................................................................................................................221721.47365000000001000000000000210001000000000001030005110302050000000000000000000000000000000000000000000000000000010000000000000000000000000000100001010000030010300000000000000000000000010000000002020500401100000010002000001400519028015953101000000030000000000000000000000000000000000000000000000000400100160900000029130004000040000017322624000000
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..............................................................................................................................................TAGGTAATGGGGGCT-GAGACACGCC.................................251921.003990000000000000000000000000000000000000010100000000000000005010000000000000000000000000000000000001000000000000000000000100000000000000003000100173110200170100000000000000000000000000000000000500302001096131800030100000100230174135375010000000000000000000000000000000000000000000000000000000000040000000000000003000000000000000011121512020000
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........................................................................................................................................TGAGGATAGGTAATGGGGGCT-GAGA.......................................251917.373300000020000000000000001000000000000000000100000000000000001000000000000000000000000000020000000001000000000000000000000000000000000402007000100000001000300000000000000000000000000000000000010400001046422130007040160001200113022014567810000000000000000000000000000000000000000000000000000000000010000003330000001042000000000000001446200000
....................TGCAGTGGAGGTAGAGGCC---------------------------------------TC.........................................................................................................................211817.1730900000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000210410000000200200000100100000000000000000510040000200000000000000300000210110000100000213100000110031040000107000110000000000000000000000511000000000000010000001501800215500003900000223012990490
...............................................................................................................TTAGTTTTACGGCTTGGAGAAGGGG.................................................................251917.1632600000000000000000000011000000000000020000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000003020000100000000135600000100118041093952100000000000000000000000000000000000000000000000000000000000300000031800000011163000000000000006243019300000
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..............TGCTGCTGCAGTGGAGGTAGAG.....................................................................................................................................................................221715.2425900000000000000000000021000000000000010202100200010100100000000000000000000000000000010000000000020100000000020001000000000000000000000100000150401309501202000000000000000000000000000000000004001000210000001314061110001812920408910000000000100000000000000000000000000000000000000000010000000600000191300000151080000000000000047106600000
.............................................................................................................TTTTAGTTTTACGGCTTGGAGAAGGGG.................................................................271914.212700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000200000000000000000000000000000000000300001020000000060301800000002211022839700000000000000000000000000000000000000000000000000000000000000000010305000000013001000100000008121311300000
...........TAATGCTGCTGCAGTGGAGGT.........................................................................................................................................................................211713.53230000000000000000000000100004000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000006053000000000000000001006000101000000000000100100064210000000100005140000000000000000000000000200000000000000000000309100000001000000000000020030001760000360000002001110140
.......TATTTAATGCTGCTGCAGTGGAG...........................................................................................................................................................................231713.41228000000000000000000000001000000000000000010100010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140303302039200000000000000000000000000000000006030400000000000100000000010012714713912420000000000000000000000000000000000000000000000000000000000000000001500000000010000000000000000100000000
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..............................................................................................................................................TAGGTAATGGGGGCT-GAGACACGCCT................................261912.8424400000000000000000000013100000000000040102000002010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337300656107103000000000000000000000000000001000000400000001531401009032000016013110201586000000000000000000000000000000000000000000000000000000000000000100040200000060000000000000000420118210000
......................................................................................................................TACGGCTTGGAGAAGGGGTGA..............................................................211912.6824100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000020200000000000000000000000001000000010000000000121000000002000000000000000000100900100000000000000000010001106100000002201030000000000000200001050000000010000000000100000001611100000200000030000001505271012360000392000010000600210
...........TAATGCTGCTGCAGTGGAGGTAGAG.....................................................................................................................................................................251711.942030000000000000000000002100000000000000000000000001000100000000000000000000000000000005010000000000000000000000000000300000000000000000001000010000020200131000000000000000000000000000000000000520201023000000001403000006005909019111610000000000000000000000000000000000000000000000000000000000020000003100000005430000000000000051084700000
..............................................................................TCCTCATT-GAGTGGCATAGTGGCCT--G..............................................................................................261911.262140000001000000000000000000000000000000020221031300030600000000000000000000000000000200140000000000000000000000000000100000000000000001001000017902507421179950000000000000000000000000000000000040020000000000501021600013000300011000000000000010000000000000000000000000000000000000000000000030010081303000000706000000000000003432000000
.................TGCTGCAGTGGAGGTAGAGGCC---------------------------------------TC.........................................................................................................................241810.33186000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232501030024010000000000000000000000000000000000020000000000015051040500090001020000000000000010000000000000000000000000000000000000000000000000500000050000000080100000000000000163022149110010
.........TTTAATGCTGCTGCAGTGGAG...........................................................................................................................................................................211710.121720000000000000000000000000030000000000000010000000001000000000000000000000000010000000000000000000000000000000000000000000000000000000000000003100000000000000000000050000000000000000500020150100000030000000000000112000020202432026200000000100100000100020000100000000000010011001200900000000000003010000100010000150000100000002000020100
..................................................................................................................GTTTTACGGCTTGGAGAAGGGGT................................................................23199.421790000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000022161219191310000000000000000000000000000000000000000000000000000000000030000100130000002210000000000000013117000000
..........TTAATGCTGCTGCAGTGGAGGTAGAGG....................................................................................................................................................................27179.411600000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000040000010010100000200029060101132200000000000000000000000000000000000000000000000000000000000000000020300000061500000000000000481414000000
...........TAATGCTGCTGCAGTGGAGGTAGA......................................................................................................................................................................24179.24157000000000000000000000001000000000000200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000220001010002000000000000000000000000000000000000040000000000000403050000030125090125700000000000000000000000000000000000000000000000000000000000013001000209000000310000000000000000913165300000
....................................................................................TT-GAGTGGCATAGTGGCCT--GC.............................................................................................21199.111730000000000000000000000000030000000000000200000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000010205010010021000000400100000000000000000000010010000000000000000000000100210020100000028910000001011012001020400008100000001000100000005121500000020000013020000111190000600002000001102071040
...................CTGCAGTGGAGGTAGAGGCC---------------------------------------T..........................................................................................................................21189.0616300000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000820100000000000000000800030000000000000000010000000203100001010000010000000000010000000003000010000000000000000000000590000000000000000000010040010340000310000000011610110
.............................................................................................................................................ATAGGTAATGGGGGCT-GAGAC......................................21198.681650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104000000000000000000240002000000000000000001000000011500000101000000300000000001000000000100001000000000000100001101051300000000000000020000310111102200001320000001011400150
...................................................................................................................TTTTACGGCTTGGAGAAGGGG.................................................................21198.42160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100010000000300000000000004010000100003017313540000000000000000000000000000000000000000000001042000000000000010100002001001013000011000003100021040
......................................................................................................................TACGGCTTGGAGAAGGGGTGAGGA...........................................................24197.89150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001010130003000419051220000000000000000000000000000000000000000000000000000000000000210000221700000051540000000000000059912600000
..................................................................................CATT-GAGTGGCATAGTGGCCT--...............................................................................................21197.7914800000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000020000004130000000000000000000270000000000000000000000001000050111000000000001000000001001002000000100001000000100000000000001061800000000000000000000300000003200005000001001061070
..............................GTAGAGGCC---------------------------------------TCCTCATT-GAGT..............................................................................................................21197.741470000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000100200006000000000000000410000000100000000000000000000014002000000000006230000000000200000100010000300000000000000000000025300000000000000000000190060000500002000000000020070
..............................................................................................................TTTAGTTTTACGGCTTGGAGAAGGGG.................................................................26197.681460000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000030201200000008041111538000000000000000000000000000000000000000000000000000000000000200000010100000024400000000000000710145100000
...........TAATGCTGCTGCAGTGGAGGTAG.......................................................................................................................................................................23177.531280000000000000000000000100000000000000000210000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010120002000000000000000000000000000000000020410003020000001030200000400230204110000000000000000000000000000000000000000000000000000010000004000010106000000391001200000000006121615101000
..............TGCTGCTGCAGTGGAGGTAGA......................................................................................................................................................................21177.29124000000000000000000000110000000000000001000001000101020000000000000000000000000000030402000000000000000000000000000000000000000000000000000000102002101010400000000600000000000000000000000001030000000000000003040000111002001012100000000001000000000000000000000000000000000000000001100000030000000010100303620001200003001002455210020
..................................................................................................................GTTTTACGGCTTGGAGAAGGGGTG...............................................................24197.2613800000000000000000000010000000000000000000000100000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000102030010100000000000000000000015027271890000000000000000000000000000000000000000000000000000000000000001000203000000017000000000000005594000000
.................................................................................TCATT-GAGTGGCATAGTGGCC..................................................................................................21197.261380000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000002006000000000000000103010100000000000000044000000000000000000000010000000021000000000110200000000100200100000030000100000010000000000000013120000000000011000000000030001900009000000000031090
.................................................................................TCATT-GAGTGGCATAGTGGCCT--GCCT...........................................................................................26197.1613600000000000000000000022000000000000020204100103010107000000000000000000000000000001000300000000000000000000010000002000000000000000000000000133011533104411400000000000000000000000000000000000402300000000002030020000200100500110000000001100000000000000000000000000000000000000000000000004000002001000000400000000000000001594100000
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...........TAATGCTGCTGCAGTGGAGGTAGAGG....................................................................................................................................................................26176.881170000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000001000000030001110000000000000000000000000000000000000011300000050000000010200000600130609990000000000000000000000000000000000000000000000000000000000002000000202000000563000000000000004947800000
......................................................................................................................TACGGCTTGGAGAAGGGGTGAGG............................................................23196.841300000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000100000000000000000002000100002100000000000000000000000000000000000000000000000101000000000060200000600320306590000000000000000000000000000000000000000000010000000010000006000000161000000021915000100001000001823000000
........................................................................................................................CGGCTTGGAGAAGGGGTGAGG............................................................21196.7412800000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000111000000000000101000000000030020010001000020000000000001000000081570000000000000400000030013001027000020000000000032050
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...............................................................................................................TTAGTTTTACGGCTTGGAGAAGGGGT................................................................26196.0511500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001100010600000000301040001000809189291000000000001000000000000000000000000000000000000000000000000000000100000000222000000000000003463300004
................CTGCTGCAGTGGAGGTAGAGG....................................................................................................................................................................21176.001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000010000000000000000000020000001010000111300000000000001000000000000000000000000000110011003000000000000020200002000000132000023010000000040050
...............................................................................................................TTAGTTTTACGGCTTGGAGAAGGG..................................................................24195.9511300000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000051000000000000000000000001901403202300000000000000000000000000000000000000000000100000000000000020000000010000000120000000000000001367000000
.................TGCTGCAGTGGAGGTAGAGGC...................................................................................................................................................................21185.72103000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000002000000000000000000000000000000000000010010000000000010010000000000000000000000000000000000000000000000010211000001100003500000000001001001000000001000000000000100000001012000000200000000100001006201031000017000001000040050
..........TTAATGCTGCTGCAGTGGA............................................................................................................................................................................19175.719700000000000000000000001000000000000000001020012010001000010000000000000000000000000000000000000020000000000000000000000000000000000000000000010000000000000000000000000000000000000009000001601000000000000000000000003011807035150000000000000000000000000000000000000000000000000000000000000000020100000000860000000000000002500000000
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.................................................................................TCATT-GAGTGGCATAGTGGCCT--GCCTT..........................................................................................27195.5310500000010000000000000012000000000000000001000102000108000000000000000000000000000000000100000000010000000000000002003000000000000000000000000015001354120218000000000000000000010000000000000003004000000000010200060004000101602020000000000000000000000000000000000000000000000000000000000001000000000010000100000000000000000120000000
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...............................TAGAGGCC---------------------------------------TCCTCATT-GAGTGG............................................................................................................22194.84920000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342101000000100000000100000000000000000000010000001000000000000000000100400000201000148200000000010000000000000000000000000000020006060300000000000001405000020242000300001000000302030020
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....................................................................................TT-GAGTGGCATAGTGGCCT--GCCT...........................................................................................23194.849200000000000000000000010000000000000010201000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032011232110203200000000100000000000000000000000020400000030000004020000000800200000000000000000100000000000000000000000000000000250000000030000000000001500000010420000000000000002101000000
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.....................................................................................................................TTACGGCTTGGAGAAGGGGTGAGGA...........................................................25191.21230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000002000000010101170000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000002012200000
..............................................................................TCCTCATT-GAGTGGCATAGTGGC...................................................................................................23191.21230000000000000000000000000000000000000000010000000000000000000000000000000000000000200000000000000000000000000000000100000000000000000000000000000010110001000000000000000000000000000000000000005000000000000000000000201010000200000000000100000000000000000010000000000000000000000000000000000000000000000110000000000000000000000000
.................................................................................................................AGTTTTACGGCTTGGAGAAGGGG.................................................................23191.21230000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000002000000030313110000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000103000000
......................................................................................................................TACGGCTTGGAGAAGGGGTGAGGATA.........................................................26191.16220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010205271000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210100000
.....................................................................................................................................GGGTGAGGATAGGTAATGGGG...............................................21191.16220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000010010001100000000000000000000000000110000000000000001000000010000500003000000000000020
.............................................................................................................................................ATAGGTAATGGGGGCT-GAGA.......................................20191.16220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000200000000000000000000020000000000000000002000000000000000100000000010000000000000000000000000000000000000000000000000300000000000001000000010020000200003000000000000010
................................................................................CTCATT-GAGTGGCATAGTGG....................................................................................................20191.16220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300100000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000110000200002000001000000030
..................GCTGCAGTGGAGGTAGAGG....................................................................................................................................................................19181.11200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000010000003000000000000000170000100000000000110000010
................................................................................................................................................GGTAATGGGGGCT-GAGACACG...................................21191.11210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000010000000000000000000001000000000000000000010300110000000000000000100000021020000100002000000000000000
...........................................................................................................................CTTGGAGAAGGGGTGAGGA...........................................................19191.112100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000001000006000000100000020
..............................................................................TCCTCATT-GAGTGGCATAGTGGCCT--GCCTT..........................................................................................30191.112100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000101311000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TACGGCTTGGAGAAGGGGT................................................................19191.11210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000110000000000000000000000000000000000000000000000000000100000001000002100000000300001400001000000101000000
....................................................................................................................................................................CGCCTTTTC-GTTTCCTGTTGA...............21191.11210000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000030000000000000000000000000000000000000000000000000010000000000000000000000040000000000000000000000000000100000000000001011000000000000000000000000000000000000010000000000110000000000000000000030010000000000000000000000010
..............................................................................................ATAGTGGCCT--GCCTTTTAGTT....................................................................................21191.11210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100002134000000000000000000000000000000000000000000000000000000000000000000000020000000100000000000000000000
...................................................................................ATT-GAGTGGCATAGTGGCCT--GC.............................................................................................22191.11210000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000001001000000000000010000000000010000000000000010000100210000001000000001000000140000000000000000000000010
...............GCTGCTGCAGTGGAGGTAGAGGCC---------------------------------------TC.........................................................................................................................26171.06180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000004000100101000000000000000000000000000000000000000001000000000010000000000010100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001310000000
....TGTTATTTAATGCTGCTGCAGTGGAG...........................................................................................................................................................................26171.06180000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000204530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..ATTGTTATTTAATGCTGCTGC..................................................................................................................................................................................21181.06190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000002010000011000000000000010000001000000000000000000000000000020000000000000000000020000000000000000000000000010
.................TGCTGCAGTGGAGGTAGAG.....................................................................................................................................................................19181.06190000000000000000000000000000000000000000100000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001001000010100000000000000000000000000000000000000000000000000000000000100100100000000000000000000000000000000000000000000000000000000200000001000000100000000111000100000000000000010000
....................TGCAGTGGAGGTAGAGGCC---------------------------------------...........................................................................................................................19181.06190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000700020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001011400000000000000000010
..............................................................................................................TTTAGTTTTACGGCTTGGAGAAGGGGT................................................................27191.05200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000020000000000000103060000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000200100000
......................................................................................................................TACGGCTTGGAGAAGGGG.................................................................18191.05200000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000010000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000203000000000000002320000000
.......................................................................................................................ACGGCTTGGAGAAGGGGTGAG.............................................................21191.05200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000001000000100000001000000000010010000000000000000000000000000000000100000000000000000010000030001300001000000000010020
...................................................................................................................TTTTACGGCTTGGAGAAGGG..................................................................20191.05200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000011100010010000000000000000000000000000000000000000000000000100000000000000000000000100000000000000002221000030
.........................................................................................................................................................................TTTC-GTTTCCTGTTGACAGT...........20191.05200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000010000000000000000000000000000000000000000000032000000000000000000000000000000000000000000000010010000000000000000000000000000400000000000000000010
..............................................................................................................................................TAGGTAATGGGGGCT-GAGAC......................................20191.05200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000001100300000100000000000000210000000000000000000000001000000000000000000000000010000000000000000000000001221000000000000000100000000
.....................................................................................................................TTACGGCTTGGAGAAGGGGTGAGG............................................................24191.05200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000002321000000000000000000000000000000000000000000000000000000000000000000002000000041000000000000000100200000
...................................................................................ATT-GAGTGGCATAGTGGCCT--GCCT...........................................................................................24191.05200000000000000000000000000000000000001000100010100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000010031000000000000000000000000000000000000001100000000001010000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
...............................................................................................TAGTGGCCT--GCCTTTTAGTTT...................................................................................21191.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000002000000001121200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211100001000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....................................CC---------------------------------------TCCTCATT-GAGTGGCATAGTGGCC..................................................................................................26191.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000100030202530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTAATGCTGCTGCAGTGGAGGTAGAGT....................................................................................................................................................................27171.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070004150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAATGCTGCTGCAGTGGAGGTT........................................................................................................................................................................22171.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000200003000000000000000
......................................................................................................................TACGGCTTGGAGAAGGGGTGAGGAT..........................................................25191.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100001570000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000020100000
...........TAATGCTGCTGCAGTGGAG...........................................................................................................................................................................19171.00170000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000100001000001000000000000000020000000000000000000000000000000110000001000000101000000000000200000000000000000020
...............................................................................................TAGTGGCCT--GCCTTTTAGTTTTACG...............................................................................25191.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000004020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000501330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GTGGCCT--GCCTTTTAGTTTTA.................................................................................21191.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010010000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000010
...................................................................................................................................................................ACGCCTTTTC-GTTTCCTGTTG................21190.95180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000024000000000010000000000000010000001000000000000012000000000000000000000010020000000000000000000010000
.................................................................................................................................GAAGGGGTGAGGATAGGTAATGGG................................................24190.95180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000010000000000000000000000203000000431000000000000000000000000
..................................................................................................................................................................CACGCCTTTTC-GTTTCCTGTT.................21190.95180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000020000000000000000000000000000000000000000002001000000000010000000000000000000000000001000100020000000000000000000000000000000000000000000000010010
....................................................................................TT-GAGTGGCATAGTGGCCT--GCC............................................................................................22190.95180000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000021110000000000000001000010200010000002000000000000000
droSim2
CGGTTATTACTTAGTGAAGACAATGAGGGTGT------TTCAAC--TT--------T----------------AGATG-GCATCTT-CAGCGGCTGAGAAACCT--GCTTCTTAGTTTTCTGATCTTTTT------------------GAAA-TGTACTTGAGTTTCCCTTAC-GTTTCCTGCCTTCAGGTATGACTGATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....TATTACTTAGTGAAGACAATGAGGG............................................................................................................................................................................25111.0011000000000011000000
....TATTACTTAGTGAAGACAATGAGG.............................................................................................................................................................................2415.00500000000005000000
..........................................................................................................................................................GTACTTGAGTTTCCCTTAC-GT.........................2112.00200000000002000000
...............................................T--------T----------------AGATG-GCATCTT-CAGCGGCTGAGA......................................................................................................2612.00200000001010000000
..........TTAGTGAAGACAATGAGGGTGT------T..................................................................................................................................................................2312.00200000000001100000
....TATTACTTAGTGAAGACAATGAGGGT...........................................................................................................................................................................2612.00200000000002000000
..............TGAAGACAATGAGGGTGT------TTCAAC--TT--------T----------------................................................................................................................................2712.00200000000002000000
..........................................................................................................................................................GTACTTGAGTTTCCCTT..............................1712.00200000000002000000
..............TGAAGACAATGAGGGTGT------...................................................................................................................................................................1812.00200000000002000000
..........................................................................................................................................................GTACTTGAGTTTCCCT...............................1612.00200000000002000000
...TTATTACTTAGTGAAGACAATGAGG.............................................................................................................................................................................2511.00100000000001000000
.......................................................................................................T--GCTTCTTAGTTTTCTGATCTTTT........................................................................2411.00100010000000000000
...............................................................................................................................................................TGAGTTTCCCTTAC-GTTTCCTGCCT................2511.00100010000000000000
......................................................................................................................TCTGATCTTTTT------------------GAAA-TGTACTTG........................................2411.00100010000000000000
....................................................................................................................TTTCTGATCTTTTT------------------GAAA-TGT.............................................2111.00100100000000000000
....TATTACTTAGTGAAGACAATGAGGGC...........................................................................................................................................................................2611.00100000000001000000
..........................................................................................................................................................GTACTTGAGTTTCCCTTAC-GTT........................2211.00100000000001000000
............................................................................TG-GCATCTT-CAGCGGCTGAGAAACC..................................................................................................2511.00100000000001000000
.................AGACAATGAGGGTGT------T..................................................................................................................................................................1611.00100000000001000000
............AGTGAAGACAATGAGGGTGT------T..................................................................................................................................................................2111.00100000000001000000
............AGTGAAGACAATGAG..............................................................................................................................................................................1511.00100000000001000000
.................................................................................................................................T------------------GAAA-TGTACTTGAGTTTCCCTTAC-GTT........................2811.00100000000001000000
....TATTACTTAGTGAAGACAAT.................................................................................................................................................................................2011.00100000000001000000
......................................TTCAAC--TT--------T----------------AGATG-GCATCTT-..................................................................................................................2111.00100000000100000000
....................................................................................TT-CAGCGGCTGAGAAACCT--GCTTCT.........................................................................................2511.00100010000000000000
....TATTACTTAGTGAAGACAATGAG..............................................................................................................................................................................2311.00100000000001000000
..........................................................................................................................................................GTACTTGAGTTTCCCTTAC-...........................1911.00100001000000000000
.........................AGGGTGT------TTCAAC--TT--------T----------------AGATG-GCA.......................................................................................................................2411.00100000000001000000
....................................................................................................................................................GAAA-TGTACTTGAGTTTCCC................................2011.00100000000001000000
...............................................................................................................TTAGTTTTCTGATCTTTTT------------------GAAA-TG..............................................2511.00100000000100000000
..........................................................................................................................................................GTACTTGAGTTTCCCTTAC-GTTTCC.....................2511.00100000000001000000
...........TAGTGAAGACAATGAGGGTGT------TTCCG..............................................................................................................................................................2611.00100000000001000000
...........TAGTGAAGACAATGAGGG............................................................................................................................................................................1811.00100000000001000000
....TATTACTTAGTGAAGACAA..................................................................................................................................................................................1911.00100001000000000000
..........TTAGTGAAGACAATGAGGGT...........................................................................................................................................................................2011.00100000000001000000
.GGTTATTACTTAGTGAAGACAATG................................................................................................................................................................................2411.00100000000001000000
..............................GT------TTCAAC--TT--------T----------------AGATG-GCATCTT-C.................................................................................................................2411.00100010000000000000
.......................TGAGGGTGT------TTCAAC--T..........................................................................................................................................................1611.00100000000001000000
.......TACTTAGTGAAGACAATGAGG.............................................................................................................................................................................2111.00100000000001000000
...........................................................................ATG-GCATCTT-CAGCGGCTGAGAAACC..................................................................................................2611.00100100000000000000
......................................................................................................................TCTGATCTTTTT------------------GAAA-TGTACTTGAGT.....................................2711.00100000000001000000
................................................................................................................................................................GAGTTTCCCTTAC-GTTTCC.....................1911.00100000000001000000
...........................................................................................................................................................TACTTGAGTTTCCCTTAC-...........................1811.00100000000001000000
...................................................................................................AACCT--GCTTCTTAGT.....................................................................................1511.00100000000001000000
........................................................................................AGCGGCTGAGAAACCT--GCTTCTTAGTT....................................................................................2711.00100010000000000000
.......................TGAGGGTGT------TTCAAC--TT--------T----------------AGATG-GC........................................................................................................................2511.00100000000001000000
.........................................................................................................................GATCTTTTT------------------GAAA-TGTACT..........................................1911.00100000000001000000
..............................................................................................TGAGAAACCT--GCTTCTTAGT.....................................................................................2011.00100000000001000000
...............GAAGACAATGAGGGT...........................................................................................................................................................................1511.00100000000001000000
........ACTTAGTGAAGACAATGAGGG............................................................................................................................................................................2111.00100000000001000000
.........................................AAC--TT--------T----------------AGATG-GCATCTT-CAGCGGC...........................................................................................................2511.00100000000001000000
...................................................................................................................TTTTCTGATCTTTTT------------------GAAA-T...............................................2011.00100000000001000000
.....................................................................................................................TTCTGATCTTTTT------------------GAAA-T...............................................1811.00100000000001000000
..........................................................................................................................................................GTACTTGAGTTTCCCTTAC-GTTTC......................2411.00100001000000000000
....TATTACTTAGTGAAGACAATGAGGGTG..........................................................................................................................................................................2711.00100000000001000000
.......................................TCAAC--TT--------T----------------AGATG-GCATCTT-CAGCGGC...........................................................................................................2711.00100100000000000000
droSec2
CTGTTATTATTAAGTTAAGACATTGAGGGTG------TCTCAAC--AC--------T----------------AGATG-GCATCTT-CTGCGGCTGAGAAGCCT--GTTTCTTAGTTTTCAGATTTTTTT------------------AAAA-CGCACTTGAATTTCCCTTAC-GTTTTCTGCCTACAGGT---ATGACTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................TTCTTAGTTTTCAGATTTTTTT------------------AAAA-................................................2611.0011000
.......................................TCAAC--AC--------T----------------AGATG-GCATCTT-CTGCGGC...........................................................................................................2711.0011000
........................................CAAC--AC--------T----------------AGATG-GCATCTT-CTGCGGC...........................................................................................................2611.0011000
....................................................................................................................................................................TTCCCTTAC-GTTTTCTGCCTACAGG...........2511.0011000
......................TTGAGGGTG------TCTCAAC--AC--------T----------------AGATG-GC........................................................................................................................2611.0010010
...............................................................................................................................................................TGAATTTCCCTTAC-GTTTTCTGCC.................2430.6722000
..............................................................................................................................................................TTGAATTTCCCTTAC-GTTTTC.....................2130.3311000
droYak3
CTGTTGTTACTTAGTGTGGGCAGGGAGCGTG------CCTCATC--TT--------T----------------AGATG-GGAACTT-CTGCGGCTGAGGAGCCT--GCTTCTTGGATTTGTCTTTCTGA---------------------C-------AACTATTCCCTTTAC-GCTTTCTGCCCACAGAT---ATAAGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................T--GCTTCTTGGATTTGTCTTTCTGA---------------------C-------AAC........................................2834.0012010200000000
.....................................................................................T-CTGCGGCTGAGGAGCCT--GCTTCTTGGA.....................................................................................2813.00300000000003
.TGTTGTTACTTAGTGTGGGCAGGGAG..............................................................................................................................................................................2672.5718000000000018
...............................................T--------T----------------AGATG-GGAACTT-CTGCGGCTGAGG......................................................................................................2672.5718011000000016
.......................................TCATC--TT--------T----------------AGATG-GGAACTT-CTGCGGC...........................................................................................................2771.861309310000000
....TGTTACTTAGTGTGGGCAGGGAGCG............................................................................................................................................................................2571.431001000010008
........................................................................................TGCGGCTGAGGAGCCT--GCTTCTTGG......................................................................................2551.20606000000000
.TGTTGTTACTTAGTGTGGGCAGGGAGC.............................................................................................................................................................................2771.14801000000007
............................................................................................................TTCTTGGATTTGTCTTTCTGA---------------------C-------AAC........................................2531.00302100000000
..............................................................................................................................TGA---------------------C-------AACTATTCCCTTTAC-GCTTTC.....................2551.00505000000000
........................................................................................TGCGGCTGAGGAGCCT--GCTTCTTGGA.....................................................................................2611.00101000000000
..............................................................................................TGAGGAGCCT--GCTTCTTGGATTTGTCT..............................................................................2711.00100100000000
........................................................T----------------AGATG-GGAACTT-CTGCGGCTGAGG......................................................................................................2570.86606000000000
............................................................................TG-GGAACTT-CTGCGGCTGAGGAGCC..................................................................................................2550.80401300000000
..........................................TC--TT--------T----------------AGATG-GGAACTT-CTGCGGCT..........................................................................................................2570.71501200020000
..........................................TC--TT--------T----------------AGATG-GGAACTT-CTGCGGC...........................................................................................................2470.71504100000000
........................................................................................TGCGGCTGAGGAGCCT--GCTTCTTG.......................................................................................2450.60303000000000
....................................................................................................................TTTGTCTTTCTGA---------------------C-------AACTATTCCCTT...............................2670.57404000000000
..............................................TT--------T----------------AGATG-GGAACTT-CTGCGGCTGAGG......................................................................................................2770.57404000000000
...TTGTTACTTAGTGTGGGCAGGGAG..............................................................................................................................................................................2470.43300000000003
..........TTAGTGTGGGCAGGGAGCGTG------CCTC................................................................................................................................................................2570.43303000000000
........................................CATC--TT--------T----------------AGATG-GGAACTT-CTGCGGC...........................................................................................................2670.43303000000000
..............................................................................................................................TGA---------------------C-------AACTATTCCCTTTAC-GCTTTCTG...................2750.40202000000000
................................................................................................................................................................CTATTCCCTTTAC-GCTTTCTGCCCAC..............2650.40202000000000
.........................................................................................GCGGCTGAGGAGCCT--GCTTCTTGG......................................................................................2450.40202000000000
..............................................................................................................................TGA---------------------C-------AACTATTCCCTTTAC-GCTTTCTGCC.................2950.40202000000000
....................................................................................................................................................................TCCCTTTAC-GCTTTCTGCCCACAGAT---A......2750.40202000000000
..............................................................................................................................TGA---------------------C-------AACTATTCCCTTTAC-GCTTT......................2450.40202000000000
............................................................................TG-GGAACTT-CTGCGGCTGAGGAGCCT--GC.............................................................................................2850.40200200000000
...........................................................................................................................TTCTGA---------------------C-------AACTATTCCCTTTAC-GCTT.......................2650.40202000000000
..........................................................................................................GCTTCTTGGATTTGTCTTTCTGA---------------------C-------...........................................2430.33101000000000
.......................................................................................................T--GCTTCTTGGATTTGTCTTTCTGA---------------------C-------A..........................................2630.33101000000000
.......................................................................................................T--GCTTCTTGGATTTGTCTTTCTGA---------------------C-------AA.........................................2730.33101000000000
............................................................................................................................TCTGA---------------------C-------AACTATTCCCTTTAC-GCT........................2470.29202000000000
..........TTAGTGTGGGCAGGGAGCGTG------CCTCA...............................................................................................................................................................2670.29202000000000
.......................................TCATC--TT--------T----------------AGATG-GGAACTT-CTGCGGCT..........................................................................................................2870.29202000000000
...............................................T--------T----------------AGATG-GGAACTT-CTGCGG............................................................................................................2070.29202000000000
..........................................................................................................................TTTCTGA---------------------C-------AACTATTCCCTTTAC-GCT........................2670.29202000000000
.......TACTTAGTGTGGGCAGGGAGCGTG------CCTC................................................................................................................................................................2870.29202000000000
..........................................TC--TT--------T----------------AGATG-GGAACTT-CTGCGG............................................................................................................2370.29201000010000
.......TACTTAGTGTGGGCAGGGAGCGTG------CCT.................................................................................................................................................................2770.29202000000000
.............................................................................G-GGAACTT-CTGCGGCTGAGGAGCCT--GC.............................................................................................2750.20101000000000
.....................................................................................T-CTGCGGCTGAGGAGCCT--GCTTCTTG.......................................................................................2650.20101000000000
...........................................................................................................................................................................AC-GCTTTCTGCCCACAGA...........1850.20101000000000
....................................................................................................................................................................TCCCTTTAC-GCTTTCTGCCCACA.............2350.20101000000000
.................................................................................AACTT-CTGCGGCTGAGGAGCCT--GCT............................................................................................2550.20101000000000
........................................................................................TGCGGCTGAGGAGCCT--GCTTCTT........................................................................................2350.20101000000000
...............................................................................................................................GA---------------------C-------AACTATTCCCTTTAC-GCTTTCTGCC.................2850.20100100000000
..............................................................................................................................................................AACTATTCCCTTTAC-GCTTTCTGCC.................2550.20101000000000
............................................................................................................................TCTGA---------------------C-------AACTATTCCCTTTAC-GCTTTCT....................2850.20101000000000
..................................................................................ACTT-CTGCGGCTGAGGAGCCT--G..............................................................................................2250.20101000000000
...........................................................................ATG-GGAACTT-CTGCGGCTGAGGAGC...................................................................................................2550.20100100000000
...............................................................................GGAACTT-CTGCGGCTGAGGAGCCT--G..............................................................................................2550.20101000000000
.................................................................................................................................................................TATTCCCTTTAC-GCTTTC.....................1850.20101000000000
....................................................................................................................................................................TCCCTTTAC-GCTTTCTGCCCACAGA...........2550.20101000000000
.....................................................................................T-CTGCGGCTGAGGAGCCT--GCTTCT.........................................................................................2450.20101000000000
...................................................................................................................................................................TTCCCTTTAC-GCTTTCTGCCCACAGA...........2650.20101000000000
.................................................................................................................................................................TATTCCCTTTAC-GCTTTCTGCCC................2350.20101000000000
..........................................................................................................................................................................TAC-GCTTTCTGCCCACAGAT---ATAAGTG2750.20101000000000
............................................................................................................................TCTGA---------------------C-------AACTATTCCCTTTAC-GCTT.......................2550.20101000000000
...................................................................................................................................................................TTCCCTTTAC-GCTTTCTGCCCACAGAT---A......2850.20101000000000
........................................................................................................................................................................TTTAC-GCTTTCTGCCCACAGAT---A......2350.20101000000000
.........................................................................................GCGGCTGAGGAGCCT--GCTTCTTG.......................................................................................2350.20101000000000
............................................................................................................................TCTGA---------------------C-------AACTATTCCCTTTAC-GCTTT......................2650.20101000000000
........ACTTAGTGTGGGCAGGGAGCGTG------CCTC................................................................................................................................................................2770.14100000010000
........................................................T----------------AGATG-GGAACTT-CTGCGGCTGAGGA.....................................................................................................2670.14100000010000
......................................CTCATC--TT--------T----------------AGATG-GGAACTT-CTGCGGC...........................................................................................................2870.14101000000000
......................................................................................................................TGTCTTTCTGA---------------------C-------AACTATTCCCTTTAC-GC.........................2970.14101000000000
.........................................................................................................................CTTTCTGA---------------------C-------AACTATTCCCTTTAC-GC.........................2670.14101000000000
........................................................T----------------AGATG-GGAACTT-CTGCGGCTG.........................................................................................................2270.14101000000000
......................................CTCATC--TT--------T----------------AGATG-GGAACTT-CTGCG.............................................................................................................2670.14101000000000
............................................................................TG-GGAACTT-CTGCGGCTGAGG......................................................................................................2170.14101000000000
..........TTAGTGTGGGCAGGGAGCGTG------CC..................................................................................................................................................................2370.14100100000000
...........................................................................................................................TTCTGA---------------------C-------AACTATTCCCTTTAC-GCT........................2570.14101000000000
....................................................................................................................TTTGTCTTTCTGA---------------------C-------AACTATTCCC.................................2470.14100100000000
........................................................................................................................TCTTTCTGA---------------------C-------AACTATTCCCTTTAC-G..........................2670.14100100000000
.......TACTTAGTGTGGGCAGGGAGCGTG------C...................................................................................................................................................................2570.14101000000000
.........................................................................AGATG-GGAACTT-CTGCGGCTGAGG......................................................................................................2470.14101000000000
...........................................C--TT--------T----------------AGATG-GGAACTT-CTGCGGC...........................................................................................................2370.14101000000000
....................................................................................................................TTTGTCTTTCTGA---------------------C-------AACTATTCCCTTTA.............................2870.14101000000000
....................................................................................................................TTTGTCTTTCTGA---------------------C-------AACTATTCCCT................................2570.14101000000000
CTGTTGTTACTTAGTGTGGT.....................................................................................................................................................................................2070.14101000000000
.....................................................................................................................TTGTCTTTCTGA---------------------C-------AACTATTCCCTT...............................2570.14101000000000
.......................................TCATC--TT--------T----------------AGATG-GGAACTT-CTGCGGCC..........................................................................................................2870.14100100000000
.....................................................................................................................TTGTCTTTCTGA---------------------C-------AACTATTCCC.................................2370.14101000000000
..........................................................................................................................TTTCTGA---------------------C-------AACTATTCCCTTTAC-GC.........................2570.14101000000000
droEre2
CGATTATTGCTAAGTGAAGACAATGAGGGTG------TCTCAAC--AT--------T----------------AGATG-GCATCTT-CTGCAGCTGAGACGCCT--GCTTTTTAGTTTTCTGATCTTTTT------------------GAAA-CGTAATTGTGTTTCCCTTAT-GTTTTCTGCCCTC---ACGTATGACTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................TCTCAAC--AT--------T----------------AGATG-GCATCTT-CTGCAG............................................................................................................2820.5011000000
.....ATTGCTAAGTGAAGACAATGAGGGT...........................................................................................................................................................................2520.5010000010

Generated: 05/15/2015 at 04:36 PM