ID:

dvi_2443

 Coordinate:

scaffold_12822:1246840-1246990 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.1 -12.0 -12.0 -11.9

Flybase annnotation

CDS [Dvir\GJ14443-cds]; exon [dvir_GLEANR_14393:2]; intron [Dvir\GJ14443-in]

No Repeatable elements found

mature
star
  1. scaffold_12726:1761946-1761965 -
  2. scaffold_12726:1862302-1862321 -
  3. dvi_2443  scaffold_12822:1246958-1246977 +
  4. scaffold_12823:2034806-2034825 +
  5. scaffold_12855:6323276-6323295 +
  6. scaffold_12855:7968259-7968278 +
  7. scaffold_12875:6882673-6882692 +
  8. scaffold_12875:11607327-11607346 +
  9. scaffold_12928:3312597-3312616 -
  10. scaffold_12928:7545741-7545760 -
  11. scaffold_12963:6705052-6705071 +
  12. scaffold_12963:8677323-8677342 -
  13. scaffold_12963:9614600-9614619 -
  14. scaffold_12963:10048665-10048684 -
  15. scaffold_12963:17562459-17562478 +
  16. scaffold_12970:11369015-11369034 +
  17. scaffold_13047:2175375-2175394 -
  18. scaffold_13047:14067776-14067795 -
  19. scaffold_13049:898134-898153 -
  20. scaffold_13049:977779-977798 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCTGCATTAGCATTAGGCCCATAGAAGGGACCTTCCAGATTAGATGTCAAGCAATGTGTATTAGCAGGTTGTTTCGACTGGGTACGTGATAAGATAAACAAATTCGTGACGCGCATTTTAAGAGCGCGATATGCTGGTGGAAATATGCCTTGAGTAATACGCACATTTGTTCTGTTTTTTTTTTTTTTTGTGTTTTACAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGT
*********************************************************************************************************...((...........((((((((....(((...((.......))...)))....)))......)))))............))*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 V116
male body		 M047
female body
 M061
embryo
 SRR060666
160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 V047
embryo
 SRR060658
140_ovaries_total
 SRR060683
160_testes_total
 SRR060662
9x160_0-2h_embryos_total
 M027
male body		 SRR060661
160x9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060679
140x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060660
Argentina_ovaries_total
 SRR060657
140_testes_total
 SRR060667
160_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060680
 9xArg_testes_total
 SRR060671
9x160_males_carcasses_total
.....................................................................................................................................................................................................................CAAACTGCTGTTGATCGGGA.................. 20 2 1 4.00 4 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GTTGATCGGCGACTCTGGC.......... 19 0 1 4.00 4 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CAAACTGCTGTTGATCGGC................... 19 0 1 3.00 3 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACTGCTGTTGATCGGCGACTCTGGC.......... 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCAAACTGCTGTTGATCGGC................... 20 0 1 3.00 3 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CAAACTGCTGTTGATCGGGAA................. 21 2 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................AATCTAATTCGTGACGCGC........................................................................................................................................ 19 2 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTGATCGGCGACTCTGGC.......... 18 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGCTGTTGATCGGCGCCTCTGGCGT........ 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGCTGTTGATCGGCGACTCTGGCGT........ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACTGCTGTTGATCGGGA.................. 19 2 1 2.00 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAACAGCGCGATTTGCTGGTGA.............................................................................................................. 22 3 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CTGTTGATCGGCGACTCTGGCGTC....... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTTCAAACTGCTGTTGATCGG.................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CGATTACCTGTTCAAACTGCTGTTGATC...................... 28 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAACAGCGCGATTTGCTGGTG............................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCTGTTGATCGGCGACTCTGGCGTTGG..... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACTGCTGTTGATCGGCGACTCTGGCGTT....... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACTGCTGTTGATCGGC................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCTGTTGATCGGCGACTCTGGC.......... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CGTGACGCGCATTTTAAGAGC............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GATTACCTGTTCAAACTGCTGT........................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GTTGATCGGCGACTCTGGCGT........ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACTGCTGTTGATCGGG................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTCAAACTGCTGTTGATCGGC................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACTGCTGTTGATCGGCGAC................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AACTGCTGTTGATCGGCGACTCTGGCG......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTTGATCGGCGACTCTGGCGTTGGA.... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CGATTATCTTTTCAAACTGCTGTT.......................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTAGCATTAGGCCCATAGAAGGGA............................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGATCGGCGACTCGGGCGTTGGAA... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTTGATCGGCGACTCTGGC.......... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GCATTAGCATTAGGCCCATAGAAGGGAC........................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTTTCAAACTGCTGTTGATCGGC................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAACAGCGCGATTTGCTGGT................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................AAACTGCTGTTGAGCGGCGACTCTGGC.......... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACTGCTGTTGATCGGGG.................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................ATACGATTATCTTTTCAAACTGCT............................. 24 3 2 1.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCAAACTGCTGTTGATCGGGA.................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATTTTAAGAGCGCGATATGCTGGTGGAA............................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AATTCGTGACGCGCATTTTAAGAGCG............................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CAAACTGCTGTTGATCGGCGACTCT............. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACTGCTGTTGATCGGGC.................. 19 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................ATCTAATTCGTGACGCGC........................................................................................................................................ 18 2 8 0.50 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0
.................................................................................................ATCAAATTAGTGACGCGCAT...................................................................................................................................... 20 2 5 0.40 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACTGCTGTTGATCGGGAATTC.............. 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATTCAAATTGCTGTTGATCGGT................... 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AACTAATTAGTGACGCGCAT...................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................AAATTGCTGTTGATCGGC................... 18 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGCGCGATTTGCTGGTGA.............................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................ATCAAATTAGTGACGCGC........................................................................................................................................ 18 2 8 0.25 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................ATCTAATTCGTGACGCGCAT...................................................................................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................AATTAGTGACGCGCATCT.................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AACTAATTAGTGACGCGCA....................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATTTGTTCTGTTTTTTTTTGT................................................................. 21 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................GTAATGCGAACATTCGTTCT............................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................AGGCCCTGAGTAATCCGCA....................................................................................... 19 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ACAGCGCGATTTGCTGGTGA.............................................................................................................. 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TGTTCTGTTTTTTTTTTTTT............................................................... 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TGGGGAATATGCACATTTGT................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCGACGTAATCGTAATCCGGGTATCTTCCCTGGAAGGTCTAATCTACAGTTCGTTACACATAATCGTCCAACAAAGCTGACCCATGCACTATTCTATTTGTTTAAGCACTGCGCGTAAAATTCTCGCGCTATACGACCACCTTTATACGGAACTCATTATGCGTGTAAACAAGACAAAAAAAAAAAAAAACACAAAATGTCGCTAATAGAAAAGTTTGACGACAACTAGCCGCTGAGACCGCAACCTTTCA
***************************************************************...((...........((((((((....(((...((.......))...)))....)))......)))))............))********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060672
9x160_females_carcasses_total
 SRR060689
160x9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 GSM1528803
follicle cells		 SRR060658
140_ovaries_total
 M027
male body		 SRR060663
160_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060664
9_males_carcasses_total
 M047
female body
 SRR060662
9x160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
...............................................................................................................................................................................................................AGAAAAGTTTCACGAAAAGTAG...................... 22 3 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TTGTCGCGCTAAACGACCAC............................................................................................................... 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGAAAAGTTTCAAGACAAGTAG...................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................AGCTTCCCTGGAAGG...................................................................................................................................................................................................................... 15 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................TCGCGCTAAACGACCACT.............................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................CGGGGTATCTTCTGTGGAAG....................................................................................................................................................................................................................... 20 3 8 0.25 2 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................GGAAGGACTAAACTCCAGTT........................................................................................................................................................................................................ 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................GGATGGACTAATCTCCAGTT........................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................CAGGGTATCTTCTGTGGAAG....................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................AAGTCGCCAATAGAAAAG..................................... 18 2 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAACACAAAAT..................................................... 21 0 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................TAGATTCCCTGGAAGG...................................................................................................................................................................................................................... 16 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGAAAAGTTTCAAGACAAGTA....................... 21 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAACACAA........................................................ 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................TAGTAGAAAAGTTTGAGGAG............................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.................GGGGTATCTTCTGTGGAAG....................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................AAAAAAAAAAAAAATACAAAATG.................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12822:1246790-1247040 + dvi_2443 AGCTGCATTAGCATT-AGGCCCATAGAAGGGACCTTCCAGATTAGATGTCAAGCAATGTGTATTAGCAGGTTGTTTCGACTGGGTACGTGATAAGATAAACAAATTCGTGACGCGCATTTTAAGAGCG-------------C-GATATGCTGGTGGAA-ATATGCCTTGAGTAATACGCACATTTGTTCTGTTTTTTTTTTTTTTTGTGTTTTACAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGT
droMoj3 scaffold_6540:33865478-33865687 + AGCTGCATTCGTAGTGAAG--CGTGAGAGTAAC-----ATAT----TGTCAAACAATGATAATTGGCAGGTT-----------TTACGCGATAAGATAAGCAA--------------TTATAATAGAGCTATTGCGCTAAAC-GATATGATGTTGAAATATATACCTTGAGTAAAACGC--------------------ACATTTTTGCTTTTACAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGATTCCGGCGTTGGAAAGT
droGri2 scaffold_15074:2610978-2611138 - GTT---------------------------------------------------------------------GCCACAAATTTGTATGCGATAAGATAAGCAAAT--ATGACGTGTATTTAAACACCC-------------CTGATATATTGTA-------AGGCCTTCAGTAA--CGC-------------TCTCTTTCGCTTCTCTCGTTTGTAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGT
droWil2 scf2_1100000004943:16072433-16072506 - TTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTTTTTACACTTTTCAGCGATTATCTATTCAAATTGCTGTTGATCGGTGACTCTGGAGTTGGAAAAT
dp5 2:5594289-5594346 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGAGATTCCGGCGTTGGAAAGT
droPer2 scaffold_19:1310885-1310942 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGTGATTCCGGCGTTGGAAAGT
droAna3 scaffold_13340:3754927-3755015 - CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAATTTGTGGTATTCTCTTTTTATACTCCGTAGCGATTATCTCTTTAAACTGTTGCTGATTGGAGATTCGGGCGTTGGAAAGT
droBip1 scf7180000396395:586845-586933 + CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATTGTGTGGTGTTCTCTCTCTATGCTCCACAGCGATTATCTCTTTAAACTGTTGCTGATTGGCGATTCGGGCGTTGGAAAGT
droKik1 scf7180000302461:226459-226518 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCACAGCGATTATCTCTTTAAACTGCTGCTTATTGGAGATTCGGGCGTTGGAAAGT
droFic1 scf7180000454096:377396-377453 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACAGCGACTATCTCTTTAAACTGCTCCTCATTGGCGACTCGGGCGTTGGAAAGT
droEle1 scf7180000491104:1623767-1623824 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCGACTATCTCTTTAAACTGCTGCTGATTGGCGACTCGGGCGTTGGAAAGT
droRho1 scf7180000770717:15688-15745 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACAGCGACTATCTCTTTAAACTGCTGCTCATTGGCGACTCGGGCGTTGGAAAGT
droBia1 scf7180000302155:470533-470590 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCCAGTGACTATCTCTTCAAACTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGT
droTak1 scf7180000415417:275319-275386 + TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCCTTTTCCCCAGTGACTATCTCTTCAAACTGCTGCTCATCGGAGACTCGGGCGTTGGAAAGT
droEug1 scf7180000409542:39197-39270 + TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTTATCTTTTCCACAGCGACTATCTCTTTAAACTGCTGCTCATTGGAGACTCGGGCGTCGGAAAGT
dm3 chr3R:17093413-17093469 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGATTATCTCTTTAAGTTGCTGCTTATTGGAGACTCGGGCGTTGGAAAGT
droSim2 3r:4214030-4214086 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGATTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGT
droSec2 scaffold_38:35745-35801 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGACTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGT
droYak3 3R:5883830-5883886 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGACTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGT
droEre2 scaffold_4770:4566904-4566960 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGACTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGCTGCATTAGCATT-AGGCCCATAGAAGGGACCTTCCAGATTAGATGTCAAGCAATGTGTATTAGCAGGTTGTTTCGACTGGGTACGTGATAAGATAAACAAATTCGTGACGCGCATTTTAAGAGCG-------------C-GATATGCTGGTGGAA-ATATGCCTTGAGTAATACGCACATTTGTTCTGTTTTTTTTTTTTTTTGTGTTTTACAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................CAAACTGCTGTTGATCGGGA..................2014.004000000000001000000000000000000000000000000000000000000000000030
..............................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGC..........1914.004000000010000000000001000000000000001000000000000000000000001000
.....................................................................................................................................................................................................................................CAAACTGCTGTTGATCGGC...................1913.003001100000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................AAACTGCTGTTGATCGGCGACTCTGGC..........2713.003000000000000000000000000000000000000000000000000000000000000003
....................................................................................................................................................................................................................................TCAAACTGCTGTTGATCGGC...................2013.003002100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTGATCGGCGACTCTGGC..........1812.002001000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................CTGCTGTTGATCGGCGACTCTGGCGT........2612.002000000000000000000000000000000000000000000000000000000000000002
......................................................................................................................................................................................................................................AAACTGCTGTTGATCGGGA..................1912.002000000000000100010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CTGTTGATCGGCGACTCTGGCGTC.......2411.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GCTGTTGATCGGCGACTCTGGCGTTGG.....2711.001000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................ACTGCTGTTGATCGGCGACTCTGGCGTT.......2811.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................AAACTGCTGTTGATCGGC...................1811.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................TGCTGTTGATCGGCGACTCTGGC..........2311.001000000000001000000000000000000000000000000000000000000000000000
..........................................................................................................CGTGACGCGCATTTTAAGAGC............................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGCGT........2111.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AAACTGCTGTTGATCGGG...................1811.001000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTCAAACTGCTGTTGATCGGC...................2111.001000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACTGCTGTTGATCGGCGAC................1911.001000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AACTGCTGTTGATCGGCGACTCTGGCG.........2711.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................TGTTGATCGGCGACTCTGGCGTTGGA....2611.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................CGATTATCTTTTCAAACTGCTGTT..........................2411.001000000000000000000000000000000000000010000000000000000000000000
.......TTAGCATT-AGGCCCATAGAAGGGA...........................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGTTGATCGGCGACTCTGGC..........2011.001000000000000000000001000000000000000000000000000000000000000000
....GCATTAGCATT-AGGCCCATAGAAGGGAC..........................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTTTCAAACTGCTGTTGATCGGC...................2311.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TCAAACTGCTGTTGATCGGGA..................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................ATTTTAAGAGCG-------------C-GATATGCTGGTGGAA-............................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................AATTCGTGACGCGCATTTTAAGAGCG-------------..............................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CAAACTGCTGTTGATCGGCGACTCT.............2511.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AAACTGCTGTTGATCGGGC..................1920.501000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TGTTCTGTTTTTTTTTTTTT...............................................................20200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
AGCTGCATTCGTAGTGAAG--CGTGAGAGTAAC-----ATAT----TGTCAAACAATGATAATTGGCAGGTT-----------TTACGCGATAAGATAAGCAA--------------TTATAATAGAGCTATTGCGCTAAAC-GATATGATGTTGAAATATATACCTTGAGTAAAACGC--------------------ACATTTTTGCTTTTACAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGATTCCGGCGTTGGAAAGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................TCAAACTGCTGTTGATCGGCGATT...............2411.001000001
................................................................................................................................................................................................................................................TGATCGGCGATTCCGGCGTTGGA....2311.001100000
.............................................................................................................................................................................................................................TATCTTTTCAAACTGCTGTTGATC......................2411.001100000
............................................................................................................................................................................................................................................CTGTTGATCGGCGATTCCC............1911.001000010
..............................................................................................................................................................................................................................................GTTGATCGGCGATTCCGGC..........1911.001000001
........................................................................................................................................................................................................................................ACTGCTGTTGATCGGCGATTCCGGCG.........2611.001100000
............................................................................................................................................................................................................................TTATCTTTTCAAACTGCTGTT..........................2111.001100000
...........................................................................................................................................................................................................................ATTATCTTTTCAAACTGCTGTTGATCGGC...................2911.001100000
.......................................................................................................................................................................................................................................AACTGCTGTTGATCGGCGATTCCGG...........2511.001100000
...........................................................................................................................................................................................................................................GCTGTTGATCGGCGATTCCGGCGTT.......2511.001000010
droGri2
GTT---------------------------------------------------------------------GCCACAAATTTGTATGCGATAAGATAAGCAAAT--ATGACGTGTATTTAAACACCC-------------CTGATATATTGTA-------AGGCCTTCAGTAA--CGC-------------TCTCTTTCGCTTCTCTCGTTTGTAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGCG.........2011.00110
........................................................................................................................................................................................................................................ACTGCTGTTGATCGGCGACTCTG............2311.00110
..............................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGCGTTG......2311.00110
................................................................................................................................................................................................................................CTTTTCAAACTGCTGTTG.........................1811.00110
droWil2
TTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTTTTTACACTTTTCAGCGATTATCTATTCAAATTGCTGTTGATCGGTGACTCTGGAGTTGGAAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGA..........1913.00300300
........................................................................................................................................................................................................................................ATTGCTGTTGATCGGTGACTCTGGA..........2513.00300201
.....................................................................................................................................................................................................................................CAAATTGCTGTTGATCGGT...................1913.00300120
.............................................................................................................................................................................................................................TATCTATTCAAATTGCTGTTGATCGGT...................2712.00201010
........................................................................................................................................................................................................................................ATTGCTGTTGATCGGTGA.................1812.00200020
..............................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAGTTGGAAA..2712.00200200
..............................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAGTTGGAA...2612.00200200
..........................................................................................................................................................................................................................................TGCTGTTGATCGGTGACTCTGGA..........2312.00200200
..........................................................................................................................................................................................................................GATTATCTATTCAAATTGCTGTTGATC......................2712.00220000
.............................................................................................................................................................................................................................................TGTTGATCGGTGACTCTGGA..........2012.00200110
..................................................................................................................................................................................................................................ATTCAAATTGCTGTTGATCGGT...................2211.00100100
....................................................................................................................................................................................................................................TCAAATTGCTGTTGATCGGTGACT...............2411.00100100
.......................................................................................................................................................................................................................................AATTGCTGTTGATCGGTGACT...............2111.00100100
....................................................................................................................................................................................................................................................CGGTGACTCTGGAGTTGGA....1911.00100010
.....................................................................................................................................................................................................................................CAAATTGCTGTTGATCGGTGA.................2111.00101000
....................................................................................................................................................................................................................................TCAAATTGCTGTTGATCGGT...................2011.00100100
..............................................................................................................................................................................................................................ATCTATTCAAATTGCTGTTGATCGGT...................2611.00100010
...........................................................................................................................................................................................................................................GCTGTTGATCGGTGACTCTGGAGTT.......2511.00100100
..............................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAGT........2111.00100010
..............................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAG.........2011.00100100
........................................................................................................................................................................................................................................ATTGCTGTTGATCGGTGACTCTG............2311.00100010
....................................................................................................................................................................................................................................................CGGTGACTCTGGAGTTGGAA...2011.00100100
.........................................................................................................................................................................................................................................TTGCTGTTGATCGGTGACT...............1911.00101000
..........................................................................................................................................................................................................................................TGCTGTTGATCGGTGACTC..............1911.00100010
.............................................................................................................................................................................................................................TATCTATTCAAATTGCTGTTG.........................2111.00100100
.................................................................................................................................................................................................................................TATTCAAATTGCTGTTGATCGGT...................2311.00100010
..........................................................................................................................................................................................................................GATTATCTATTCAAATTGCTGTT..........................2311.00100100
............................................................................................................................................................................................................................................CTGTTGATCGGTGACTCTGGA..........2111.00100010
.................................................................................................................................................................................................................................................GATCGGTGACTCTGGAGTTG......2011.00101000
...................................................................................................................................................................................................................................TTCAAATTGCTGTTGATCGGT...................2111.00100010
..........................................................................................................................................................................................................................................TGCTGTTGATCGGTGACTCTGGAGTTG......2711.00100100
.....................................................................................................................................................................................................................................CAAATTGCTGTTGATCGGTGACTCTGGA..........2811.00100100
dp5
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGAGATTCCGGCGTTGGAAAGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTGGA....2213.0030300000000
.....................................................................................................................................................................................................................................................GGAGATTCCGGCGTTGGA....1813.0030300000000
.....................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATT...............2312.0020110000000
.................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTG......2012.0020200000000
.............................................................................................................................................................................................................................................TGCTGATTGGAGATTCCGGCGTTGG.....2512.0020000000020
.................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTGG.....2112.0020200000000
.............................................................................................................................................................................................................................................TGCTGATTGGAGATTCCGGCGT........2212.0020000000020
.....................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGT...................1912.0020200000000
..................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTGG....................2111.0010100000000
.........................................................................................................................................................................................................................................CTGTTGCTGATTGGAGATTCCGGCGTTG......2811.0010100000000
..................................................................................................................................................................................................................................................ATTGGAGATTCCGGCGTTGGA....2111.0010100000000
..................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTGGAGATTC..............2711.0010100000000
..............................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTTG......2311.0010100000000
.....................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATTCCGG...........2711.0010100000000
..............................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTTGGAAAG.2811.0011000000000
.................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTGGAA...2311.0010100000000
.....................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATTCCGGC..........2811.0010010000000
..............................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTT.......2211.0010100000000
..................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTGGA...................2211.0010100000000
.................................................................................................................................................................................................................................TCTTCAAACTGTTGCTGATTGGA...................2311.0010100000000
..............................................................................................................................................................................................................................ATCTCTTCAAACTGTTGCTGATTG.....................2411.0010000100000
............................................................................................................................................................................................................................................TTGCTGATTGGAGATTCCGGCGTT.......2411.0010100000000
....................................................................................................................................................................................................................................................TGGAGATTCCGGCGTTGGA....1911.0010010000000
.........................................................................................................................................................................................................................................CTGTTGCTGATTGGAGATTCCGGC..........2411.0010000100000
............................................................................................................................................................................................................................TTATCTCTTCAAACTGTTGCT..........................2111.0010100000000
......................................................................................................................................................................................................................................AAACTGTTGCTGATTGGAGATTCCGGC..........2711.0010000000001
..............................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTTGGA....2511.0010100000000
..............................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGC..........1911.0010100000000
......................................................................................................................................................................................................................................AAACTGTTGCTGATTGGAGA.................2011.0010100000000
.....................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATTC..............2411.0010100000000
.............................................................................................................................................................................................................................................TGCTGATTGGAGATTCCG............1811.0010000000010
...................................................................................................................................................................................................................................TTCAAACTGTTGCTGATTGG....................2011.0010100000000
......................................................................................................................................................................................................................................AAACTGTTGCTGATTGGAG..................1911.0010000100000
.............................................................................................................................................................................................................................TATCTCTTCAAACTGTTGCTG.........................2111.0010100000000
.....................................................................................................................................................................................................................................CAAACTGTTGCTGATTGG....................1811.0010100000000
................................................................................................................................................................................................................................CTCTTCAAACTGTTGCTGATTGG....................2311.0010100000000
........................................................................................................................................................................................................................................ACTGTTGCTGATTGGAGATT...............2011.0010000000001
droPer2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGTGATTCCGGCGTTGGAAAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................AAACTGTTGCTGATTGGT...................1812.002200000
...................................................................................................................................................................................................................................TTCAAACTGTTGCTGATT......................1811.001100000
.................................................................................................................................................................................................................................................GATTGGTGATTCCGGCGTTG......2011.001001000
...................................................................................................................................................................................................................................TTCAAACTGTTGCTGATTG.....................1911.001010000
......................................................................................................................................................................................................................................AAACTGTTGCTGATTGGTGATT...............2211.001100000
..................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTG.....................2011.001010000
.....................................................................................................................................................................................................................................................GGTGATTCCGGCGTTGGAAA..2011.001001000
......................................................................................................................................................................................................................................AAACTGTTGCTGATTGGTGATTCCGGCG.........2811.001000001
..............................................................................................................................................................................................................................ATCTCTTCAAACTGTTGCTGATT......................2311.001100000
..............................................................................................................................................................................................................................................GCTGATTGGTGATTCCGGC..........1911.001001000
....................................................................................................................................................................................................................................................TGGTGATTCCGGCGTTGGA....1911.001000001
.....................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGTGATTCCGGC..........2811.001000001
................................................................................................................................................................................................................................CTCTTCAAACTGTTGCTGATT......................2111.001001000
droAna3
CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAATTTGTGGTATTCTCTTTTTATACTCCGTAGCGATTATCTCTTTAAACTGTTGCTGATTGGAGATTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................GTTGCTGATTGGAGATTCGGG...........2111.001100000
......................................................................................................................................................................................................................................................GAGATTCGGGCGTTGGAA...1811.001100000
....................................................................................................................................................................................................................................TTAAACTGTTGCTGATTGGA...................2011.001100000
.....................................................................................................................................................................................................................................................GGAGATTCGGGCGTTGGAAA..2011.001100000
.....................................................................................................................................................................................................................................................GGAGATTCGGGCGTTGGAAAGT2211.001010000
...........................................................................................................................................................................................................................................GTTGCTGATTGGAGATTCGGGC..........2211.001001000
droBip1
CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATTGTGTGGTGTTCTCTCTCTATGCTCCACAGCGATTATCTCTTTAAACTGTTGCTGATTGGCGATTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droKik1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCACAGCGATTATCTCTTTAAACTGCTGCTTATTGGAGATTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droFic1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACAGCGACTATCTCTTTAAACTGCTCCTCATTGGCGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droEle1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCGACTATCTCTTTAAACTGCTGCTGATTGGCGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droRho1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACAGCGACTATCTCTTTAAACTGCTGCTCATTGGCGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droBia1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCCAGTGACTATCTCTTCAAACTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droTak1
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCCTTTTCCCCAGTGACTATCTCTTCAAACTGCTGCTCATCGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droEug1
TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTTATCTTTTCCACAGCGACTATCTCTTTAAACTGCTGCTCATTGGAGACTCGGGCGTCGGAAAGTSizeHit CountTotal NormTotal
No Reads
dm3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGATTATCTCTTTAAGTTGCTGCTTATTGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................AGTTGCTGCTTATTGGAGA.................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000010001000000000000000000000010001000000010000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTGCTGCTTATTGGAGACTCGGGC..........2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001010000000000000000000000021001000
..............................................................................................................................................................................................................................................GCTTATTGGAGACTCGGGC..........1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000002000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000
.......................................................................................................................................................................................................................................AGTTGCTGCTTATTGGAGACTCGGGC..........2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................................................................................TATTGGAGACTCGGGCGTTGGAAAG.2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................CTGCTTATTGGAGACTCGGGC..........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000
........................................................................................................................................................................................................................................GTTGCTGCTTATTGGAGACTCGGGC..........2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTATTGGAGACTCGGGCGTTGGAAAG.2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000
..........................................................................................................................................................................................................................................TGCTGCTTATTGGAGACTCGGGC..........2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000
.......................................................................................................................................................................................................................................AGTTGCTGCTTATTGGAGACT...............2113.0030000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GCTTATTGGAGACTCGGGCGT........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GGAGACTCGGGCGTTGGAAA..2013.0030000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.........................................................................................................................................................................................................................................................ACTCGGGCGTTGGAAAGT1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................GAGACTCGGGCGTTGGAAG..1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTAAGTTGCTGCTTATTGGAGACT...............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
....................................................................................................................................................................................................................................TTAAGTTGCTGCTTATTGGAGACTCGG............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................TTGGAGACTCGGGCGTTGG.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................TTGCTGCTTATTGGAGACTCGGG...........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TTGGAGACTCGGGCGTTGGAAAGT2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGCTTATTGGAGACTCGGG...........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................................................................................................................................................GACTCGGGCGTTGGAAAGT1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGCTTATTGGAGACTCGGGCGTTGGAA...2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................TATTGGAGACTCGGGCGTTGGAAA..2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATTGGAGACTCGGGCGTTGGAA...2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTAAGTTGCTGCTTATTGGAGACTCGGGC..........2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GCTTATTGGAGACTCGGGCGTTGGA....2512.0020000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................TTGGAGACTCGGGCGTTG......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATTGGAGACTCGGGCGTTGG.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGCTGCTTATTGGAGACTCGG............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGCTGCTTATTGGAGACTC..............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TGGAGACTCGGGCGTTGGAAAG.2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GCTTATTGGAGACTCGGGCG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AGTTGCTGCTTATTGGAGAC................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................ATTGGAGACTCGGGCGTTGGAAA..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................................................................................................................................................................................TTAAGTTGCTGCTTATTGGAGAC................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................AAGTTGCTGCTTATTGGAGACTC..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGCTTATTGGAGACTCGGGCGTTG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATTGGAGACTCGGGCGTTGGAA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTAAGTTGCTGCTTATTGGAGACTCG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACTCGGGCGTTGGAAAG.1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................ATCTCTTTAAGTTGCTGCTTA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................TGGAGACTCGGGCGTTGG.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................GCTTATTGGAGACTCGGGCGTT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GTTGCTGCTTATTGGAGACTCGGG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................TATCTCTTTAAGTTGCTGCT..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGCTGCTTATTGGAGACTCGGGCGTT.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................CTGCTTATTGGAGACTCGG............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................TGGAGACTCGGGCGTTGGA....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................TATTGGAGACTCGGGCGTTGGAAAGT2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATTGGAGACTCGGGCGTTGGA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................TTGGAGACTCGGGCGTTGGAAAGG2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AAGTTGCTGCTTATTGGAGACTCGGGC..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................TAAGTTGCTGCTTATTGGAGACTCG.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTATTGGAGACTCGGGCGTTGGAAA..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................GTTGCTGCTTATTGGAGA.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTAAGTTGCTGCTTATTG.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATTGGAGACTCGGGCGTT.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTAAGTTGCTGCTTATTGGAGAC................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GCTGCTTATTGGAGACTCGGGC..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................TATCTCTTTAAGTTGCTGCTTA........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTAAGTTGCTGCTTATTGGAGACTCGGG...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................GCTGCTTATTGGAGACTC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TAAGTTGCTGCTTATTGGAGACTCGG............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................GTTGCTGCTTATTGGAGACT...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CTGCTTATTGGAGACTCGGG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GACTCGGGCGTTGGAAAG.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CAGCGATTATCTCTTTAAGTT................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................ATTATCTCTTTAAGTTGCTGC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTATTGGAGACTCGGGCGTTGGAAAGT2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GCTTATTGGAGACTCGGGCGTTGG.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................ATCTCTTTAAGTTGCTGT...........................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
droSim2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGATTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................TGCTCATTGGAGACTCGGGCGTTGGA....2612.00200000011000000000
.............................................................................................................................................................................................................................................TGCTCATTGGAGACTCGGGCGTTG......2412.00200000000000020000
..................................................................................................................................................................................................................................CTTTAAGTTGCTGCTCATTGG....................2111.00100010000000000000
..........................................................................................................................................................................................................................GATTATCTCTTTAAGTTGCTGCTCAT.......................2611.00100010000000000000
..........................................................................................................................................................................................................................................TGCTGCTCATTGGAGACTCGGGC..........2311.00100000000010000000
................................................................................................................................................................................................................................................TCATTGGAGACTCGGGCGTTT......2111.00100000000000001000
.............................................................................................................................................................................................................................TATCTCTTTAAGTTGCTGCT..........................2011.00100010000000000000
droSec2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGACTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................AGTTGCTGCTCATTGGAGACTC..............2211.0010010
...........................................................................................................................................................................................................................................GCTGCTCATTGGAGACTCGGGC..........2211.0010010
..............................................................................................................................................................................................................................................GCTCATTGGAGACTCGGGC..........1911.0010001
.................................................................................................................................................................................................................................................CATTGGAGACTCGGGCGTTGGA....2211.0010100
........................................................................................................................................................................................................................................GTTGCTGCTCATTGGAGACTCGGGC..........2511.0010010
............................................................................................................................................................................................................................CTATCTCTTTAAGTTGCTGCTC.........................2211.0010010
............................................................................................................................................................................................................................CTATCTCTTTAAGTTGCTG............................1911.0010010
..................................................................................................................................................................................................................................CTTTAAGTTGCTGCTCATTGGAGA.................2411.0010010
....................................................................................................................................................................................................................................TTAAGTTGCTGCTCATTGGA...................2011.0010100
........................................................................................................................................................................................................................................GTTGCTGCTCATTGGAGA.................1811.0010010
...............................................................................................................................................................................................................................................CTCATTGGAGACTCGGGC..........1811.0010010
..........................................................................................................................................................................................................................GACTATCTCTTTAAGTTGCTGCT..........................2311.0010010
droYak3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGACTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................CTATCTCTTTAAGTTGCTGCTCATTGGA...................2821.00202000000000
..............................................................................................................................................................................................................................ATCTCTTTAAGTTGCTGCG..........................1920.50110000000000
................................................................................................................................................................................................................................CTCTTTAAGTTGCTGCTCATTGGA...................2420.50100000010000
................................................................................................................................................................................................................................CTCTTTAAGTTGCTGCTCATTGGAGA.................2620.50101000000000
..............................................................................................................................................................................................................................ATCTCTTTAAGTTGCTGCTCATTGGA...................2620.50101000000000
....................................................................................................................................................................................................................................TTAAGTTGCTGCTCATTGGAGA.................2220.50101000000000
...................................................................................................................................................................................................................................TTTAAGTTGCTGCTCATTGGA...................2120.50100000010000
.......................................................................................................................................................................................................................................AGTTGCTGCTCATTGGAGACTCG.............2320.50100000010000
..........................................................................................................................................................................................................................GACTATCTCTTTAAGTTGC..............................1920.50101000000000
.....................................................................................................................................................................................................................................TAAGTTGCTGCTCATTGGAGACTCGGGC..........2820.50100000010000
..........................................................................................................................................................................................................................GACTATCTCTTTAAGTTGCT.............................2020.50100100000000
..................................................................................................................................................................................................................................................ATTGGAGACTCGGGCGTTGGA....2120.50101000000000
..................................................................................................................................................................................................................................CTTTAAGTTGCTGCTCATTGGAGACTC..............2720.50100000010000
droEre2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAGCGACTATCTCTTTAAGTTGCTGCTCATTGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................TTAAGTTGCTGCTCATTGGA...................2012.0020000200
..............................................................................................................................................................................................................................................GCTCATTGGAGACTCGGGC..........1912.0021000010
.................................................................................................................................................................................................................................................CATTGGAGACTCGGGCGTT.......1911.0010010000
............................................................................................................................................................................................................................CTATCTCTTTAAGTTGCTGCTC.........................2211.0010100000
.......................................................................................................................................................................................................................................AGTTGCTGCTCATTGGAGACT...............2111.0010000100
...........................................................................................................................................................................................................................................GCTGCTCATTGGAGACTCGGG...........2111.0010000010
.................................................................................................................................................................................................................................TCTTTAAGTTGCTGCTCATTGGA...................2311.0010000100
....................................................................................................................................................................................................................................................TGGAGACTCGGGCGTTGGAA...2011.0011000000
............................................................................................................................................................................................................................CTATCTCTTTAAGTTGCTGCTCATTGG....................2711.0010000100
........................................................................................................................................................................................................................................................GACTCGGGCGTTGGAAAGC1911.0010100000
..........................................................................................................................................................................................................................GACTATCTCTTTAAGTTGCTGCTC.........................2411.0011000000
........................................................................................................................................................................................................................................GTTGCTGCTCATTGGAGACTC..............2111.0011000000
........................................................................................................................................................................................................................................................GACTCGGGCGTTGGAAAGT1911.0010100000
..............................................................................................................................................................................................................................ATCTCTTTAAGTTGCTGCTCA........................2111.0010000100
..............................................................................................................................................................................................................................ATCTCTTTAAGTTGCTGCTCATTGGA...................2611.0010000100
.........................................................................................................................................................................................................................................................ACTCGGGCGTTGGAAAGC1820.5010000010

Generated: 05/17/2015 at 04:55 AM