ID:

dvi_2442

 Coordinate:

scaffold_12822:1245927-1246077 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.3 -7.0 -6.7 -6.7

Flybase annnotation

exon [dvir_GLEANR_14393:1]; CDS [Dvir\GJ14443-cds]; intron [Dvir\GJ14443-in]

No Repeatable elements found

Sense Strand Reads

---------------------------#######################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTGAACAAAAATCCAAAACGAAAAACATGTCATCTATGAATCCAGAATAGTAAGTCGTTCACATGCATTAATTGCGCGTAATTGAGATATTCACTCGAACAATGAAAAACCTTGCACTCATCCGCGTTCCATAACCCAGCACTGGTCACCTTTTTCTCTTTTTTTTTTTTCATTCTTTTGCGTTTCTGCGACGTCATTTTTGCGACGTCCACGACGACTTTTTAGCAGTCACCGCAGCCCCACACCCTTT
*****************************************************((...(((..........((((..((....(((.....)))..))..)))))))....))****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 GSM1528803
follicle cells		 M027
male body		 M028
head
 SRR060655
9x160_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 V053
head
 V116
male body
....................GAAAAACATGTCATCTATG.................................................................................................................................................................................................................... 19 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................TTCACTCGAACAATGAAAAACCT.......................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................AGTCGTTCACATGCATTAATT................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................ATGTCATCTATGAATCCAGA............................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................ATCCGCGTTCCATAACCCAG............................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
...........ATCCAAAACGAAAAACATGTC........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................ATAACCCAGCACTTGTCACCTT.................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........AATCCAAAACGAAAAACAT.............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATAACCCAGCACTGGTCACCTT.................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................TCCGCGTTCCATAACCCAGCA............................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................ATAACCCAGCACTGGTCCCCTT.................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................ATATTCACTCGAACAATGAAAAACCT.......................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................AAACATGTCATCTATGAATCCAGA............................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................ACATGTCATCTATGAATCC............................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CCTGCACTGATCCGCTTTC......................................................................................................................... 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTTTTTAGTTGTCACCGCT.............. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GAACTTGTTTTTAGGTTTTGCTTTTTGTACAGTAGATACTTAGGTCTTATCATTCAGCAAGTGTACGTAATTAACGCGCATTAACTCTATAAGTGAGCTTGTTACTTTTTGGAACGTGAGTAGGCGCAAGGTATTGGGTCGTGACCAGTGGAAAAAGAGAAAAAAAAAAAAGTAAGAAAACGCAAAGACGCTGCAGTAAAAACGCTGCAGGTGCTGCTGAAAAATCGTCAGTGGCGTCGGGGTGTGGGAAA
******************************************************************************************************************************************((...(((..........((((..((....(((.....)))..))..)))))))....))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060666
160_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060659
Argentina_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060673
9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060657
140_testes_total
 SRR060660
Argentina_ovaries_total
 V047
embryo
 V053
head
 SRR060667
160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 GSM1528803
follicle cells		 M047
female body
 SRR060665
9_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060664
9_males_carcasses_total
.......................................................................................................................................AGGTAGTGCCCAGTGGAAA................................................................................................. 19 3 10 43.50 435 213 35 32 30 17 6 0 19 18 11 5 13 4 5 6 0 0 0 0 4 4 3 0 3 0 3 0 2 1 1 0
........................................................................................................................................GGTAGTGCCCAGTGGAAA................................................................................................. 18 2 3 8.33 25 3 2 0 4 5 3 0 1 0 2 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGGTAGTGCCCAGTGGAA.................................................................................................. 18 3 20 3.90 78 5 16 7 3 4 2 0 10 6 2 1 0 4 0 4 0 0 0 0 0 4 3 0 0 3 0 0 1 2 0 1
.............................................................................................TGAGCTTGTTACTTTTTGGAA......................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CGTGAGTAGGCGCGAGGTGTT.................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGGAACGTGAGTAGGCGCA........................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GGGTCGTGACCAGTGGAAAAA............................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TATTGGGTCGTGACCAGTGGAA.................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CGTGAGTAGGCGCAAGGTA...................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTTGGATCGTGAGTAGC............................................................................................................................... 18 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCTGCAGGTGCTGCTGAAAAA........................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAACTTGTTTTTAGGTTTTGC...................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CGAGGTATTGGGTCGTGACCA........................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GGGTAGTGCCCAGTGGAAA................................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGGTCGTGCCCAGTGGAAA................................................................................................. 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAGGTATTGCCTCGTGAC.......................................................................................................... 18 2 5 0.40 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GCGCATTCGCTCCATAAGTGA........................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GAGAAAAAAAAAAATGTAAGG.......................................................................... 21 2 7 0.29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGCTGCGGATAAATCGTCCG.................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................GTTTTGGATCGTGAGTAG................................................................................................................................ 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................GTAGTGCCCAGTGGAAAAAC.............................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGTTTGTGGATCGTGAGTAG................................................................................................................................ 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AAAAAAAAAGTAAGAAGAC...................................................................... 19 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AGGTAGTGTCCAGTGGAAA................................................................................................. 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GATAGTGCCCAGTGGAAA................................................................................................. 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGAGTAAAAAAAAAATGTAAGG.......................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................AAAAAAAAAAAGTAAGAAAAT...................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................AAGGTATTGCCTCGTGACA......................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12822:1245877-1246127 + dvi_2442 CTTGAACA---------------------------------------A--AAATCC-----AAAACGAAAAAC-ATGTCATCTATGAATCCAGAATAGTAAGTCG-TTCACATGCA-------TTAATTGCGCGT-AATT----GAGA--------TA--TTCACTCGAAC-----A--------------------AT--GAA-AAAC-CTTGCACTCA---TCCGCGTTCCATAACCCAGCACTGGTCACCTTT-TTCTCTTT---------TTTTTTTTTCATTCTTTT-G-CGTTTCTGCGACGTCATTTTTGCGACGTC----------------------------------C-----AC-GACGACTTTTTAGCAGTCA-------CC-GCAGCCC-----CACACCCTTT-----------------------------------
droMoj3 scaffold_6540:33864343-33864578 + CTTTAACA-----------------------------------GGAAA--ACTACC----CGAAACTAAAAACTATGTCATCAATGAATCCAGAATAGTAAGTT---------------------AATTGCGCGT-AATT----GAGA--------TGTATTGATATGTAC-----A--------------------AT--GAA-AAAC-CTTGTACTCA---TCCGCGTTCCATAAGC-AGCACTGGTCACCTTTTTTTTTTTA--------------------TTCTTTTGT-CGTTTCTGCGACGTCATTTTTGCGACGTC----------------------------------C-----AC-GACGACTCTTTGGTAGTTG-------CC-GCGGCCC-----CACACCCTCT-----------------------------------
droGri2 scaffold_15074:2611945-2612171 - TTTGAACA---------------------------------------A--AAGCAAAAGCCTAAAG--AAAA--ATGTCATCTATGAATCCAGAATAGTAAGTCG--TCACATGCA-------TTAATTGCGCGT-AATT----GAGAAACGCAAAAT-------AAAAAT-----AATAA-----------------A--AA--A-AAACTTGCAC--C--CTTCGCGTTCCATAACC-AGCACTGCTAAC-----TTTTTTT-----------------------------T-CTTTTCTGCGACGTCATTTTTGCGACGTC---------------------------------CA-CGACGACT-AAAC------TCG-CCA-------GC-C-----CCA---CACTCCCTTT-----------------------------------
droWil2 scf2_1100000004943:16073151-16073489 - TATATATACATCGGTATATAACACACAAGGAAAGGAATAAAAAAGAAAAAAAACCT------CAA---CAAA--ATGTCATCTATGAATCCAGAATAGTAAGTCGCGTCACTTGCAAAATAAAGAAATTGCGCAT-AAAATACAAAGA--------TT-------GCGTCG-----AATTTG-TGCCTTTTGT----TA--AA--A-ACATT-------------TTCGTTCGATAAT--TT---------T-----TTCGCTCAACGCGAGGTTTTTTTTTT----------C-ATTTTCTGCGACGTCATA-------CGTCCACGACAACGACTAATATGACTAGTACTATAGCCT-----CT-GTTCTGCCTTAGATTC-------------------TCGGTCCACTCCCTTTTTTTCTGTTTTGCGCGAGAACTTGTTAAAAATGAA
dp5 2:5595135-5595352 - CTTGTGAA---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTGAATCCCGAATAGTAAGTTG--TCACATGCA-------TAAACTGCGCAC-CAGT----GCGG--------TG-------GAGACC-----ATTGAC-TTATTTTTCA----TT--GA--A-ACATTTTTACAC---TCTCGCGTTCGATAAT--CG---------T-----TGCTTTCATCA-------------T----------TT-TTTTTCTGCGACGTCATTTTTGCTACGTC---------------------------------CG-----CT-AGTCGTCTCCCATCCCACA-------G------------CCCACTCCCTTT-----------------------------------
droPer2 scaffold_19:1311733-1311950 - CTTGTGAA---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTGAATCCCGAATAGTAAGTTG--TCACATGCA-------TAAACTGCGCAC-CAGT----GCGG--------TG-------GAGACC-----ATTGAC-TTATTTTTCA----TT--GA--A-ACATTTTTACAC---TCTCGCGTTCGATAAT--CG---------T-----TGCTTTCATCA-------------T----------TT-TTTTTCTGCGACGTCATTTTTGCTACGTC---------------------------------CG-----CT-AGTCGTCTCCCATCCCACA-------G------------CCCACTCCCTTT-----------------------------------
droAna3 scaffold_13340:3755581-3755823 - CTTGTGAA---------------------------------------A--AGGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCATCTGCA-------GCAATTGCGCAT-AACT----TGGA--------TG-------TGTCGA-----ATTT-C-TGGCTTTA---GCATT--GGA-ATACA--T-CAC--A--TCTCTCGTTCGATAATC-AG---------T-----TT----------------------------------T-CTTTTCTGCGACGTCATTTTTGCTACGTT---------------------------------TC-----CA-TTCCATTCATCGGCCACCAGTCATCAGCCC-----CCACGCCACTCCCCTCTGCACCTTGCTG---CTGGCTTTGTT---------
droBip1 scf7180000396395:586049-586261 + CTTGTGAA---------------------------------------A--AGGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCATCTGCA-------TCAATTGCGCAT-AATT----TGGA--------TC-------TTGCCC-----TTTT-C-TGGATTTC---GCATT--GGA-ATACA--T-CAC--A--TCTCTCGTTCGATAATC-AG---------T-----TT----------------------------------T-CTTTTCTGCGACGTCATTTTTGCTACGTT---------------------------------TC-----CA-TTCCATTCATCGGCCACCA-------GCCC-----CCACGCCACTCCCCTA-----------------------------------
droKik1 scf7180000302461:227641-227867 - CTTGTCAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACACA-------GCAATTGCGCAT-AATT----GGGA--------TC-------GGGAACAACGGAGTGAC-TGGTTTTCCA----TTTCGA--A-AC--TCGCCAGC---GCCAGCCTTCGCTAAT--CG---------T-----TTCATATA----------------------------T--TTTTCTGCGACGTCATTT-TGCTACGTT---------------------------------TCATAGCCATT-CCATTCATCAGCTCTCT-------CG-GCC---C--CTCCACTCCCTTT-----------------------------------
droFic1 scf7180000454096:378182-378391 - CT-GTGAA---------------------------------------A---AGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACTCGCA-------GTAATTGCGCAT-ATTT-------------AGCTT-------GAAAGT-----GGTGAC-TGGCTCTCCA----TC--GA--G-ACACTTCCTC--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------TTTTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-T-CCATTCATCAGCGAGCA-------GC-C-----C-----CACTCCCTTT-----------------------------------
droEle1 scf7180000491104:1624607-1624820 - CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACATGCA-------GCAACTGCGCAT-AATT----AGGA--------TT-------GGGAGC-----AGAGAC-TGGTTTTCCG----TG--GA--A-ACATTTCCAC--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------TTTTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATCATCGAGCA-------GC-C-----C-----CACTCCCTTT-----------------------------------
droRho1 scf7180000770717:16528-16739 - CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACATGCA-------TCAACTGCGCAT-AATT----AGGA--------TT-------GGGAAC-----ACTGAC-TGGTTTTCCA----TG--GA--A-ACATTTTC-T--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATCATCGAGTA-------GC-C-----C-----CACTCCCTTT-----------------------------------
droBia1 scf7180000302155:471341-471556 - CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCAAACGTC-------GCTA-TGCGCAGCAATG------------TGGAGT-------TAAAGT-ACTTGTCAAC-TGGTTTTCCACGCATTGGG-AAA-ACACCTCT-C--GCCCCTGGCCTTCGAACAT--AG---------T-----TTCTTTTA----------------------------T--TTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-T-CCATTCATCATCGAGCA-------GC-C-----C-----CAC------------------------------------------
droTak1 scf7180000415417:274435-274657 + CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCC-------GTTA-TGCGCATTAATT------------TGG-GC-------CAAAGT-GCCCAGTGAC-TGGTTTTCCACGGATC--GAAAA-ACACTTCCTC--GCCCCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATCATCGAGCA-------GC-C-----C-----CACTCCCT-T-----------------------------------
droEug1 scf7180000409542:38285-38497 + CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCA-------GTTA-TGCGCATTAATT------------TGGATT-------AAAAGT-----AGTGAC-T----TTTTA----CG--GA--A-TGGCTTCTAC--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-T-CCATTCATCATCGAGCA-------GA-GCAGCCC-----CACTCCCTTT-----------------------------------
dm3 chr3R:17094325-17094534 - CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGTA-------ATTA-TGCGCAGTTATC------------TGGAGT-------TAAAAC-----AGTGAC-TGGGCTTCCAC-----------------TTCCTT--T--TCTGGCCTTCGAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------
droSim2 3r:4213039-4213248 + dsi_12179 CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACAAACA-------ATTA-TGCGCAGTTATC------------TGGAGT-------AGAAAC-----GGTGAC-TGGGCTTCCAC-----------------TTCCTT--A--CCTGGCCTTCGAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------
droSec2 scaffold_38:34766-34975 + CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACAAACA-------ATTA-TGCGCAGTTATC------------TGGAGT-------AGAAAC-----GGTGAC-TGGGCTTCCAC-----------------TTCCTT--A--ACTGGCCTTCGAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------
droYak3 3R:5884697-5884898 - CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCA-------ATTA-TGCGCAGTTATC------------TGGAGT-------TAAAAC-----GGTTTACAGCTCTTCCAC-----------------TTC-------------CTTTCGAATGT--GG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------
droEre2 scaffold_4770:4565910-4566103 + CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCA-------ATTA-TGCGCAGTTATC------------TGGAGT-------AAAAAC-----TGTGAC-TGGTCTTCCAC-----------------CTT-----------CTACCCAAAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----C-----CACACC---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTTGAACA---------------------------------------A--AAATCC-----AAAACGAAAAAC-ATGTCATCTATGAATCCAGAATAGTAAGTCG-TTCACATGCA-------TTAATTGCGCGT-AATT----GAGA--------TA--TTCACTCGAAC-----A--------------------AT--GAA-AAAC-CTTGCACTCA---TCCGCGTTCCATAACCCAGCACTGGTCACCTTT-TTCTCTTT---------TTTTTTTTTCATTCTTTT-G-CGTTTCTGCGACGTCATTTTTGCGACGTC----------------------------------C-----AC-GACGACTTTTTAGCAGTCA-------CC-GCAGCCC-----CACACCCTTT-----------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................GAAAAAC-ATGTCATCTATG...............................................................................................................................................................................................................................................................................................................................................................................1912.002001000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................TTCACTCGAAC-----A--------------------AT--GAA-AAAC-CT.................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
....................................................................................................AGTCG-TTCACATGCA-------TTAATT....................................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................ATGTCATCTATGAATCCAGA.......................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................A---TCCGCGTTCCATAACCCAG...................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
....................................................ATCC-----AAAACGAAAAAC-ATGTC......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
...................................................AATCC-----AAAACGAAAAAC-AT.........................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ATAACCCAGCACTGGTCACCTT......................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................TCCGCGTTCCATAACCCAGCA.................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................A--------TA--TTCACTCGAAC-----A--------------------AT--GAA-AAAC-CT.................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................AAAC-ATGTCATCTATGAATCCAGA.......................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................AC-ATGTCATCTATGAATCC..........................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTTTAACA-----------------------------------GGAAA--ACTACC----CGAAACTAAAAACTATGTCATCAATGAATCCAGAATAGTAAGTT---------------------AATTGCGCGT-AATT----GAGA--------TGTATTGATATGTAC-----A--------------------AT--GAA-AAAC-CTTGTACTCA---TCCGCGTTCCATAAGC-AGCACTGGTCACCTTTTTTTTTTTA--------------------TTCTTTTGT-CGTTTCTGCGACGTCATTTTTGCGACGTC----------------------------------C-----AC-GACGACTCTTTGGTAGTTG-------CC-GCGGCCC-----CACACCCTCT-----------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....ACA-----------------------------------GGAAA--ACTACC----CGAAA....................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...................................................................AAAAACTATGTCATCAATG...............................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................................................................TTTTTTTA--------------------TTCTTTTGT-CGT...........................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTGGTAGTTG-------CC-GCGG.....................................................2111.001100000
.....................................................................AAACTATGTCATCAATGAATCCAGAATA....................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droGri2
TTTGAACA---------------------------------------A--AAGCAAAAGCCTAAAG--AAAA--ATGTCATCTATGAATCCAGAATAGTAAGTCG--TCACATGCA-------TTAATTGCGCGT-AATT----GAGAAACGCAAAAT-------AAAAAT-----AATAA-----------------A--AA--A-AAACTTGCAC--C--CTTCGCGTTCCATAACC-AGCACTGCTAAC-----TTTTTTT-----------------------------T-CTTTTCTGCGACGTCATTTTTGCGACGTC---------------------------------CA-CGACGACT-AAAC------TCG-CCA-------GC-C-----CCA---CACTCCCTTT-----------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................AAGCCTAAAG--AAAA--ATGTC......................................................................................................................................................................................................................................................................................................................................................................................1911.00101
.......................................................AAAGCCTAAAG--AAAA--ATGTCATCT..................................................................................................................................................................................................................................................................................................................................................................................2411.00110
droWil2
TATATATACATCGGTATATAACACACAAGGAAAGGAATAAAAAAGAAAAAAAACCT------CAA---CAAA--ATGTCATCTATGAATCCAGAATAGTAAGTCGCGTCACTTGCAAAATAAAGAAATTGCGCAT-AAAATACAAAGA--------TT-------GCGTCG-----AATTTG-TGCCTTTTGT----TA--AA--A-ACATT-------------TTCGTTCGATAAT--TT---------T-----TTCGCTCAACGCGAGGTTTTTTTTTT----------C-ATTTTCTGCGACGTCATA-------CGTCCACGACAACGACTAATATGACTAGTACTATAGCCT-----CT-GTTCTGCCTTAGATTC-------------------TCGGTCCACTCCCTTTTTTTCTGTTTTGCGCGAGAACTTGTTAAAAATGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................ATAACACACAAGGAAAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1917.00700520
...............ATATAACACACAAGGAAAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000
.................ATAACACACAAGGAAAGGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
.................ATAACACACAAGGAAAGGAATA..............................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
...........................AGGAAAGGAATAAAAAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
........CATCGGTATATAACACACAAGGAAAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...................................................................................................................................................A--------TT-------GCGTCG-----AATTTG-TGCCT.........................................................................................................................................................................................................................................................................2011.00110000
..............................................................CAA---CAAA--ATGTCATCTATGAATCCAGA.......................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...................................................................................................................................................A--------TT-------GCGTCG-----AATTTG-TGCCC.........................................................................................................................................................................................................................................................................2011.00110000
.....................................................................................................................................AT-AAAATACAAAGA--------TT-------GCGTCG-----AATTT................................................................................................................................................................................................................................................................................2711.00100100
...............ATATAACACACAAGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
.....ATACATCGGTATATAACACACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
....................ACACACAAGGAAAGGAATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................ATGTCATCTATGAATCCAGA.......................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...............ATATAACACACAAGGAAAGGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
......................................................................AA--ATGTCATCTATGAATCCAGAATA....................................................................................................................................................................................................................................................................................................................................................................2511.00100001
..................................GAATAAAAAAGAAAAAAAACCT------CAA---.................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.......ACATCGGTATATAACACACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
......................................................................................................................................................................................................................................................................................................................................................................T-----CT-GTTCTGCCTTAGATTC-------------------...................................................1911.00101000
dp5
CTTGTGAA---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTGAATCCCGAATAGTAAGTTG--TCACATGCA-------TAAACTGCGCAC-CAGT----GCGG--------TG-------GAGACC-----ATTGAC-TTATTTTTCA----TT--GA--A-ACATTTTTACAC---TCTCGCGTTCGATAAT--CG---------T-----TGCTTTCATCA-------------T----------TT-TTTTTCTGCGACGTCATTTTTGCTACGTC---------------------------------CG-----CT-AGTCGTCTCCCATCCCACA-------G------------CCCACTCCCTTT-----------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......A---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTGA..............................................................................................................................................................................................................................................................................................................................................................................2513.0030300000000
...................................................ATACC------------CAAA--ATGTCATCTGTG...............................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
..TGTGAA---------------------------------------A--AATACC------------CAAA--ATGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................TACC------------CAAA--ATGTCATCTGTGA..............................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................ATACC------------CAAA--ATGTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
................................................................................................................................................................................................................................TCGCGTTCGATAAT--CG---------T-----TGC.................................................................................................................................................................................................2011.0010100000000
...................................................ATACC------------CAAA--ATGTCATCTGTGAATCCC.........................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.......A---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTG...............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....GAA---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTG...............................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................CTACGTC---------------------------------CG-----CT-AGTCGTCTCC............................................................................2111.0010100000000
......................................................................AA--ATGTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................CAAA--ATGTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
CTTGTGAA---------------------------------------A--AATACC------------CAAA--ATGT.......................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
CTTGTGAA---------------------------------------A--AATACC------------CAAA--AT.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................CGTCATTTTTGCTACGTC---------------------------------CG-----C........................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................TCGTCTCCCATCCCACA-------G------------CC.............................................2011.0010100000000
............................................................................GTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...................................................ATACC------------CAAA--ATGTCATCTGTGAATC...........................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
......AA---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTGA..............................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................................................TGTCATCTGTGAATCCCGAATACG..................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...................................................ATACC------------CAAA--ATGTCATCTGT................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................ATCA-------------T----------TT-TTTTTCTGCGACGT................................................................................................................................................2111.0010100000000
CTTGTGAA---------------------------------------A--AATACC------------CAAA--ATGTCATCT..................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........................................................................ATGTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................TGTCATCTGTGAATCCCGAATA....................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
..............................................................................CATCTGTGAATCCCGAATACG..................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.............................................................................................................................................................................................................A-ACATTTTTACAC---TCTCGCG................................................................................................................................................................................................................................2011.0010100000000
droPer2
CTTGTGAA---------------------------------------A--AATACC------------CAAA--ATGTCATCTGTGAATCCCGAATAGTAAGTTG--TCACATGCA-------TAAACTGCGCAC-CAGT----GCGG--------TG-------GAGACC-----ATTGAC-TTATTTTTCA----TT--GA--A-ACATTTTTACAC---TCTCGCGTTCGATAAT--CG---------T-----TGCTTTCATCA-------------T----------TT-TTTTTCTGCGACGTCATTTTTGCTACGTC---------------------------------CG-----CT-AGTCGTCTCCCATCCCACA-------G------------CCCACTCCCTTT-----------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................ATACC------------CAAA--ATGTCATCTGTGAATCC..........................................................................................................................................................................................................................................................................................................................................................................2612.002200000
..............................................................................CATCTGTGAATCCCGAATAC...................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.....................................................ACC------------CAAA--ATGTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...............................................................................ATCTGTGAATCCCGAATAC...................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................TACC------------CAAA--ATGTCATCTGTGAATCCCG........................................................................................................................................................................................................................................................................................................................................................................2711.001010000
............................................................................GTCATCTGTGAATCCCGAATACGG.................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................A--ATGTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................A--ATGTCATCTGTGAATCCCGAATACG..................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.............................................................................................................................................................................................................A-ACATTTTTACAC---TCTCGCGTTC.............................................................................................................................................................................................................................2311.001100000
....................................................TACC------------CAAA--ATGTCATCTGTGAATC...........................................................................................................................................................................................................................................................................................................................................................................2411.001010000
............................................................................GTCATCTGTGAATCCCGAATAC...................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................ATACC------------CAAA--ATGTCATCTGTGAATCCCGA.......................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.....................................................ACC------------CAAA--ATGTCATCTGTGAATCCC.........................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....TGAA---------------------------------------A--AATACC------------CAAA--ATGTCATCTGT................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.......................................................................A--ATGTCATCTGTGAATCCC.........................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droAna3
CTTGTGAA---------------------------------------A--AGGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCATCTGCA-------GCAATTGCGCAT-AACT----TGGA--------TG-------TGTCGA-----ATTT-C-TGGCTTTA---GCATT--GGA-ATACA--T-CAC--A--TCTCTCGTTCGATAATC-AG---------T-----TT----------------------------------T-CTTTTCTGCGACGTCATTTTTGCTACGTT---------------------------------TC-----CA-TTCCATTCATCGGCCACCAGTCATCAGCCC-----CCACGCCACTCCCCTCTGCACCTTGCTG---CTGGCTTTGTT---------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................AA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2213.003120000
..........................................................................ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2012.002001010
......................................................CA------------GAAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2612.002020000
............................................................................GTCATCTGTGAATCCGGAAT.....................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...GTGAA---------------------------------------A--AGGCCA------------GAAA--AT.........................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
......AA---------------------------------------A--AGGCCA------------GAAA--ATGTC......................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................................................................................................................GCAATTGCGCAT-AACT----TGGA--------TG-------TG..............................................................................................................................................................................................................................................................................................2411.001000001
............................................................................GTCATCTGTGAATCCGGAATACG..................................................................................................................................................................................................................................................................................................................................................................2311.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................CACTCCCCTCTGCACCTTGC.........................2011.001100000
......................................................................AA--ATGTCATCTGTGAATCCGGAATAC...................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...................................................GGCCA------------GAAA--ATGTCATCTGT................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................................................................A--ATGTCATCTGTGAATCC..........................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
CTTGTGAA---------------------------------------A--AGGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCATCTGCA-------TCAATTGCGCAT-AATT----TGGA--------TC-------TTGCCC-----TTTT-C-TGGATTTC---GCATT--GGA-ATACA--T-CAC--A--TCTCTCGTTCGATAATC-AG---------T-----TT----------------------------------T-CTTTTCTGCGACGTCATTTTTGCTACGTT---------------------------------TC-----CA-TTCCATTCATCGGCCACCA-------GCCC-----CCACGCCACTCCCCTA-----------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTTGTCAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACACA-------GCAATTGCGCAT-AATT----GGGA--------TC-------GGGAACAACGGAGTGAC-TGGTTTTCCA----TTTCGA--A-AC--TCGCCAGC---GCCAGCCTTCGCTAAT--CG---------T-----TTCATATA----------------------------T--TTTTCTGCGACGTCATTT-TGCTACGTT---------------------------------TCATAGCCATT-CCATTCATCAGCTCTCT-------CG-GCC---C--CTCCACTCCCTTT-----------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CT-GTGAA---------------------------------------A---AGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACTCGCA-------GTAATTGCGCAT-ATTT-------------AGCTT-------GAAAGT-----GGTGAC-TGGCTCTCCA----TC--GA--G-ACACTTCCTC--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------TTTTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-T-CCATTCATCAGCGAGCA-------GC-C-----C-----CACTCCCTTT-----------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACATGCA-------GCAACTGCGCAT-AATT----AGGA--------TT-------GGGAGC-----AGAGAC-TGGTTTTCCG----TG--GA--A-ACATTTCCAC--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------TTTTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATCATCGAGCA-------GC-C-----C-----CACTCCCTTT-----------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACATGCA-------TCAACTGCGCAT-AATT----AGGA--------TT-------GGGAAC-----ACTGAC-TGGTTTTCCA----TG--GA--A-ACATTTTC-T--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATCATCGAGTA-------GC-C-----C-----CACTCCCTTT-----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCAAACGTC-------GCTA-TGCGCAGCAATG------------TGGAGT-------TAAAGT-ACTTGTCAAC-TGGTTTTCCACGCATTGGG-AAA-ACACCTCT-C--GCCCCTGGCCTTCGAACAT--AG---------T-----TTCTTTTA----------------------------T--TTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-T-CCATTCATCATCGAGCA-------GC-C-----C-----CAC------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCC-------GTTA-TGCGCATTAATT------------TGG-GC-------CAAAGT-GCCCAGTGAC-TGGTTTTCCACGGATC--GAAAA-ACACTTCCTC--GCCCCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATCATCGAGCA-------GC-C-----C-----CACTCCCT-T-----------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCA-------GTTA-TGCGCATTAATT------------TGGATT-------AAAAGT-----AGTGAC-T----TTTTA----CG--GA--A-TGGCTTCTAC--G--CCTGGCCTTCGATAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-T-CCATTCATCATCGAGCA-------GA-GCAGCCC-----CACTCCCTTT-----------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGTA-------ATTA-TGCGCAGTTATC------------TGGAGT-------TAAAAC-----AGTGAC-TGGGCTTCCAC-----------------TTCCTT--T--TCTGGCCTTCGAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................A--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................A--ATGTCATCTGTGAATCCG.........................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................A------------GAAA--ATGTCATCTGTGAATCCGGAAT.....................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AAGCCA------------GAAA--ATGTCATCT..................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CCAC-----------------TTCCTT--T--TCTGGCCT...............................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................A------------GAAA--ATGTCATCTGTGAATC...........................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AAA--ATGTCATCTGTGAATCCGG........................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AA--ATGTCATCTGTGAATCCGGAAT.....................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTCTGCTACGTT---------------------------------TC-----AT-TCCGT.................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AA--ATGTCATCTGTGAATCCGG........................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.......................................................A------------GAAA--ATGTCATCTGTGAAT............................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GTCATCTGTGAATCCGGAAT.....................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000
...........................................................................TGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGT.......................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.......................................................................A--ATGTCATCTGTGAATCCGGAATAC...................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................A--AAGCCA------------GAAA--ATGTCATCTGT................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
......................................................CA------------GAAA--ATGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ATCCGGAATAGTAAGTCG--T.........................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GTGAC-TGGGCTTCCAC-----------------TTCCT.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................A----------------------------T-TTTTTCTGCGACGTCATTTCTG........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...GTGAA---------------------------------------A--AAGCCA------------GAAA--A..........................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCT..................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................T--TCTGGCCTTCGAAAAT--AG---------T-----T...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CCCATTCATTATCGAGCA-------GC-C-----...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................................T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGT................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................CA------------GAAA--ATGTCATCTGTGAATC...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AAA--ATGTCATCTGTGAATCCG.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....GAA---------------------------------------A--AAGCCA------------GAAA--ATGTCAT....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................TAAAAC-----AGTGAC-TGGGCTTCC.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTC...............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATGTCATCTGTGAATCCGGAATA....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATGTCATCTGTGAATCCGGAAT.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TC-----AT-TCCCATTCATTATCGAG.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................A--ATGTCATCTGTGAATCCGGAAT.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GAGT-------TAAAAC-----AGTGAC-TGGGC.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......A---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAAT............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GTGAATCCGGAATAGTAAG...............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AGTCG--TCACACGTA-------ATTA-TGC..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................TCCGGAATAGTAAGTCG--TC........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AA--ATGTCATCTGTGAATCCGGAATACG..................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GAAA--ATGTCATCTGTGAATCCGG........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................C-----AT-TCCCATTCATTATCGAGCA-------GC-.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................GTGAC-TGGGCTTCCAC-----------------TTC...............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TAAGTCG--TCACACGTA-------ATTA-T....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................A--ATGTCATCTGTGAATCC..........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATGTCATCTGTGAATCCGG........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TTTCTGCTACGTT---------------------------------TC-----AT-TCCT..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GACGTCATTTCTGCTACG...................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTCTGCTACGTT---------------------------------TC-----AT-TCC...................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GTGAATCCGGAATAGTAAGTC.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTA----------------------------T-TTTTTCTGCGACG.................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTCTGCTACGTT---------------------------------TC-----AT-TC....................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....GAA---------------------------------------A--AAGCCA------------GAAA--ATGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AGTCG--TCACACGTA-------ATTA-TGCG.................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................T-------TAAAAC-----AGTGAC-TGGGCTTC......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................GCCA------------GAAA--ATGTCATCTG.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATTCATTATCGAGCA-------GC-C-----C..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TTTCTGCTACGTT---------------------------------TC-----AT-TCC...................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TATC------------TGGAGT-------TAAAAC-----AGTGAC-TGGGC.........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTGCTACGTT---------------------------------TC-----AT-TCCCATT...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................GAAA--ATGTCATCTGTGAATCC..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................A------------GAAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CA------------GAAA--ATGTCATCTGTGAATCC..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTGTGAA---------------------------------------A--AAGCCA------------GAAA--A..........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................A--ATGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTCTGCTACGTT---------------------------------TC-----AT-TCCG..................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTG.................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTTTCTGCGACGTCATTTCTG........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTCTGCGACGTCATTTCTGCTA.....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................GCCA------------GAAA--ATGTCATCTGTGAA.............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GAATCCGGAATAGTAAGTCG--T.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................TTTCTGCTACGTT---------------------------------TC-----AT-TCCG..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCCA------------GAAA--ATGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGTGAATCCGGAATAGTAAGTC.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGAA---------------------------------------A--AAGCCA------------GAAA--ATGTC......................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CGCAGTTATC------------TGGAGT-------TAAA............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................TGTCATCTGTGAATCCGGAATACG..................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AATAGTAAGTCG--TCACACGTA-------..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................AGCCA------------GAAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTTCTGCGACGTCATTTCTGC.......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................A--AAGCCA------------GAAA--ATGTCATCTGTGA..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TA-------ATTA-TGCGCAGTTATC------------TGGA.........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTCATTTCTGCTACGTT---------------------------------TC-----AT-......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TA-------ATTA-TGCGCAGTTATC------------TGG..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ATTA-TGCGCAGTTATC------------TGGAG........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TCTGCTACGTT---------------------------------TC-----AT-TCCGTC................................................................................2150.8040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CGAAAAT--AG---------T-----TTCTTTTC----------------------------................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................CTGTGAATCCGGAATACG..................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droSim2
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACAAACA-------ATTA-TGCGCAGTTATC------------TGGAGT-------AGAAAC-----GGTGAC-TGGGCTTCCAC-----------------TTCCTT--A--CCTGGCCTTCGAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................A------------GAAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
.......................................................................A--ATGTCATCTGTGAATCCGGAATAC...................................................................................................................................................................................................................................................................................................................................................................2512.00201100000000000000
.......................................................................A--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2112.00200100000000100000
...........................................................................TGTCATCTGTGAATCCGG........................................................................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
.......................................................A------------GAAA--ATGTCATCTGTGAATCCGGG.......................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..TGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGT.......................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
......................................................CA------------GAAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.............................................................................................................................................................................................................................................T--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGAA..................................................................................................................................................2511.00100000000100000000
..................................................................................................................................................................................................................................................................................................................CGTCATTTCTGCTACGTT---------------------------------TC-----AT-T.....................................................................................2311.00100010000000000000
........................................................................................................................................................TGGAGT-------AGAAAC-----GGTGAC-TGGT..........................................................................................................................................................................................................................................................................2211.00100000000000001000
..........................................................................ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
........................................................................................................................................TATC------------TGGAGT-------AGAAAC-----GGTGT................................................................................................................................................................................................................................................................................2111.00100000000000001000
.................................................................................................GTAAGTCG--TCACAAACA-------ATTA-TG...................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
......................................................CA------------GAAA--ATGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
..........................................................................ATGTCATCTGTGAATCCGGG.......................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......................................................................................................................................................................................................................................................................................................................ATTTCTGCTACGTT---------------------------------TC-----AT-TCC...................................................................................2111.00110000000000000000
droSec2
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACAAACA-------ATTA-TGCGCAGTTATC------------TGGAGT-------AGAAAC-----GGTGAC-TGGGCTTCCAC-----------------TTCCTT--A--ACTGGCCTTCGAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................AAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2311.0010010
............................................................................GTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................1811.0010010
......................................................CA------------GAAA--ATGTCATCTGTGAATCC..........................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.......................................................................A--ATGTCATCTGTGAATCCGG........................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................................................A------------GAAA--ATGTCATCTGTGA..............................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.......................................................A------------GAAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2511.0011000
...............................................................................ATCTGTGAATCCGGAATAC...................................................................................................................................................................................................................................................................................................................................................................1911.0011000
droYak3
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCA-------ATTA-TGCGCAGTTATC------------TGGAGT-------TAAAAC-----GGTTTACAGCTCTTCCAC-----------------TTC-------------CTTTCGAATGT--GG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----CCACTCCACTCCCTTT-----------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................A--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2121.00200000020000
..........................................................................ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2021.00200000020000
.....GAA---------------------------------------A--AAGCCA------------GAAA--ATGTCAT....................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................................................................................................................................................................AAAAC-----GGTTTACAGCTCTTCCA....................................................................................................................................................................................................................................................................2220.50101000000000
............................................................................................GAATAGTAAGTCG--TCACACGC..................................................................................................................................................................................................................................................................................................................................................2120.50110000000000
.......................................................................A--ATGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2220.50100000010000
......................................................................AA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2220.50100000010000
.......................................................................A--ATGTCATCTGTGAATCCGGAATA....................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
............................................................................................................................................................GT-------TAAAAC-----GGTTTACAGCTCTTCCA....................................................................................................................................................................................................................................................................2520.50101000000000
......................................................................AA--ATGTCATCTGTGAATCCGG........................................................................................................................................................................................................................................................................................................................................................................2120.50100100000000
droEre2
CTTGTGAA---------------------------------------A--AAGCCA------------GAAA--ATGTCATCTGTGAATCCGGAATAGTAAGTCG--TCACACGCA-------ATTA-TGCGCAGTTATC------------TGGAGT-------AAAAAC-----TGTGAC-TGGTCTTCCAC-----------------CTT-----------CTACCCAAAAAAT--AG---------T-----TTCTTTTA----------------------------T-TTTTTCTGCGACGTCATTTCTGCTACGTT---------------------------------TC-----AT-TCCCATTCATTATCGAGCA-------GC-C-----C-----CACACC---------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................ATCTGTGAATCCGGAATAC...................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.....GAA---------------------------------------A--AAGCCA------------GAAA--ATGT.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.......................................................................A--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................AA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.......................................................A------------GAAA--ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................................................AAGCCA------------GAAA--ATGTCATCTGTGAAT............................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................................................................................ATCCGGAATAGTAAGTCG--TCAA......................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.......................................................................A--ATGTCATCTGTGAATCCGGAAT.....................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
......................................................................AA--ATGTCATCTGTGAATCCGGAA......................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..........................................................................ATGTCATCTGTGAATCCGGA.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000010

Generated: 05/17/2015 at 04:48 AM