ID:

dvi_22406

 Coordinate:

scaffold_13324:2704278-2704428 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.4 -11.3 -11.2 -10.8

Flybase annnotation

CDS [Dvir\GJ19770-cds]; exon [dvir_GLEANR_5023:6]; intron [Dvir\GJ19770-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCTCTTTTCAGGGCAATCAATACTTTCAATATTATTACAATTTCTAAAAATATTTCAACACCTTTTCCCCCTAGTTACCTTCAATCGCGTTTCAAGGCGAATTTCATAAAAGCTTCAGCTAACCTAAGTTCTCTCTGAGTATTCAATTCTGTTAATTCATTCACTGTCGCTCGCTCATTGCATGCTTGGCCCACACACAGCACAACATGGAACACCTGGGCGCAGGTATTCTGCGCGACTCGCAGCACAT
***********************************************************************************....((........((((...............(((............(((...))).........)))...............)))).........)).******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060679
140x9_testes_total
 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
 SRR1106730
embryo_16-30h
 GSM1528803
follicle cells		 V053
head
...................................................................................AATCGCGTTTCAAGGCGAATT................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................TTCACTGTCGCTCGCTCATTGCA.................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ATTCTGTTAATTCATTCACT..................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......TTGGCGGGCAATCAATACTTTC............................................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................CACAACATGGAACACCTGGGCGCAGG........................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................CAACATGGAACACCTGGGCGC........................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................ATATTTCAACACCTTTTCCCCCT.................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GGTATTCTGCGCGACTCGCA...... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................AAGCTTCAGCTAACCTAAGTTCTCTC................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CAACATGGAACGCCTGGGCGCA.......................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................CACCTTTTCCCCCTAGTTACCTTCA....................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................AAGCTTCAGCTAACCTAAGTTCTCTCT.................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................TTTCAAGGCGAATTTCATAAA............................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GTCGCTCGCTCATTGCATGCTTG.............................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTGCATGCTTGGCCCACA....................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTATTCTGCGCGACTCCCA...... 19 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................ATTCTGTTATTTCACTAACTG.................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TGCTTGGACCACACA..................................................... 15 1 13 0.08 1 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................TGTATGCTTGGACCACA....................................................... 17 2 17 0.06 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................TCATTCATTGTCGCTCTCCC.......................................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GAGAGAAAAGTCCCGTTAGTTATGAAAGTTATAATAATGTTAAAGATTTTTATAAAGTTGTGGAAAAGGGGGATCAATGGAAGTTAGCGCAAAGTTCCGCTTAAAGTATTTTCGAAGTCGATTGGATTCAAGAGAGACTCATAAGTTAAGACAATTAAGTAAGTGACAGCGAGCGAGTAACGTACGAACCGGGTGTGTGTCGTGTTGTACCTTGTGGACCCGCGTCCATAAGACGCGCTGAGCGTCGTGTA
********************************************************************....((........((((...............(((............(((...))).........)))...............)))).........)).*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060657
140_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 V053
head
......................................................................................................................................AGACCCAAAAGTTAAGACAGTT............................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TCGATTGGACTAAAAAGAGA.................................................................................................................. 20 3 12 0.25 3 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0
..........................................................................................................TATGCTCGAAGACGATTGGA............................................................................................................................. 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CAAGAGGGAAGCATAAGTTA....................................................................................................... 20 3 10 0.20 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GAGACTCATAACTTATGACTA................................................................................................. 21 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGAAGACGATAGGACTCA......................................................................................................................... 19 3 17 0.18 3 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................AGACCCAAAAGTTAAGACA.................................................................................................. 19 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGAAGACGATAGGATTCC......................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1
............................................................................................................TTTTCGAAGTTGAGTGGA............................................................................................................................. 18 2 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................ATGCTCGAAGACGATTGGA............................................................................................................................. 19 3 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AATATTACAAAGTTGTGGAA.......................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................TTGGACGCGCGGCCATAA.................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13324:2704228-2704478 + dvi_22406 CTCTCT--TTTCAGGGCAATCAATACTTTCAATATTATTACAATTTCTA-A--------AA-ATA------------------------------TTTCA-ACACC--T----TTTCCCCCTAGT------TACCTTCAATC---GC-------------GTTT-CAAGGCGAATTTCATAAAAGCTTCAG--------CTAA------------CCTAAG-----TTC------------------T-----------------C---TCTGAG---------------------------------------------------------------------------------T--ATTCAATT------CTG--TTAAT-------------------------TCATTCACTGTCGCT----CG-CTCA-TTGCATGC---TTGGCC-------C-----------ACACACAGCACAACATGGAACACC---TGGGCGCAGGTATTCTGCGCGACTCGCAGCACAT
droMoj3 scaffold_6496:14089229-14089541 - CTCTCT--TTTCAGGGCAATCAATACTTTCAATATTATTACAATTACTAAA--------TCTCTATATATATATATATATGAATATATGTATAAATC----ACCCACTT-----GAGTTCC-------------C------C--CTC-------------GATT-AAAGGCGAATTTCATAA--GCTTCAG--------CT----------------------------------------------A-----------------T---TCTCAAA-------------G---TTCTT----C---TCTC-T---TTCTATCTACCTGTCTCTCTCTCTATCTCTACTTCTTTGAGTCAATTCAATT------CTG--TTAAT-------------------------TCATTCATTGTCACT----CG-CTCACTTGCATG------CTCG---GC-CT-A----------CACACAGCACAACATGGAGCATC---TGGGCTCTGGCCTGCTGCGCGACGGCCAGCACAT
droGri2 scaffold_15112:4767282-4767589 - CTCTCT--TTTCAGGGCAATCAATATTTTCAATATTATTACAATTACTA-A--------TTAA-A------------------------------TC--AGACCCA--TTCTCTTACCCCCTGATCTATTATACCCCCATCCCC-AA-------------ATCT-AAAGGCGAATTTCATAA--GCTACTCCGACTA--CTAG---------A--TCTAAG---TGTTC-------------------------------------------------------------------------TCTCTCTGAG--------------------------------------------T--CTTCAGTTGGTCATCTGATTTAATTCATT--CA--TTTGTCC------ATTTGTCATTG----T----CG-CTCA-TTGCATGCTCG---CTC---GGCCCAACAAAAAAAAAAACACAGTACAACATGGATCACAGCCTGGGGTCGGGAATTCTGCGTGATGCCCAACACAT
droWil2 scf2_1100000004822:1757885-1758124 + TA---T--TTTCAGGGCAATCAATATTTTCAATACTATTATAATTTCTAAAATACACGTTCTTTG------------------------------TT----ACGA----TAGAAAAGTTCC-------------------------TAAAAATATGCTATAATA-AAAGGCGAATTTCATGA--CTT--------------------------------AG---TCT-CTT---------------------------TTGAACCCC------------------------------------CCACTTCAT---T----------------------------------------------------------------------------------TCTAATATTGTTT-----AG-TACT----CA-----------CA----TTGACCCCCAA-TT-CC-----A--TTACACAGCACAACATGGAACAACAT--CATCTC-TCTGGATTCCGCGACTCGCAGCACAT
dp5 3:9893499-9893785 + CTCTCT--TTTCAGGGGAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACACA---------AGTTGC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC------------TAACCCAAAACAG--TCTCAG---TGT-CTCT--------CTCTATCACTCTCCGTCTCTGAGCCCCCT---------------------------CTCTA-------------------CCCACCCTTCT-------------------------------------------------CTT----TCTCTCCGT-CTCCGTCTCTGTCTCTCACT--CACT----GA-CTCA-TTGCATGCTCT---GCC---TC-CT-CC-----A---CACACAGCACAACATGGAGCACCATCTGGGTGGCGTGGGCCTGCGGGACTCGCAGCACAT
droPer2 scaffold_4:5211652-5211946 + CTCTCT--TTTCAGGGGAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACACA---------AGTTGC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC------------TAACCGAAAACAG--CATCAG---TGT-CTCTCTCTCTCTCTCTATCACTCTCCGTCTCTGAGCCCCCT---------------------------CTCTA-------------------CCCACCCATCT-------------------------------------------------CTT----TCTCTCCGT-CTCCGTCTCTGTCTCTCAC-G-CACT----GA-CTCA-TTGCATGCTCT---GCC---TC-CT-CC-----A---CACACAGCACAACATGGAGCACCATATGGGAGGCGTGGGCCTGCGGGACTCGCAGCACAT
droAna3 scaffold_13266:11498351-11498607 - TTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCT-----------CCAA--------CC--CAAGACTTTTGATC------------------T-----------------------TTTGAC-C-----------------CT----GCCCCTAGAC-TC---TGC----------C---C-CTCTTTG----T-----------------------------------------C---TCTCTAT------GTCTCGCGTTG-CACT----CATCTCA-TGTCACC----TTGTCG---AA-AT-CC-----ATTCCATACAGCACAACATGGAGCACC---TGAGCGGC---GGCTTGAGGGACTCGCAGCGCAT
droBip1 scf7180000396547:969606-969871 + TTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACGCA--------TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCAACT--------CCAA---------C--CCCGACTTTTGATC------------------T-----------------------TTTGAA-CC---TG----CCCATGCCC----CTACCTTAGACTC---TGC----------C---CCCTCTTTG----T-----------------------------------------C---TCTCTAT------GTCT--TG-------TCGCCCATCTCA-TATCACC----TTGTCG---AA-AT-CC-----ATTCCATACAGCACAACATGGAGCACC---TAAGCGG---TGGCCTGAGGGACTCCCAGCGCAT
droKik1 scf7180000302682:867950-868219 + CTCTCTTATTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTAAG--------TGACTG------------------------------TCT-C-TCGCA--T-----TAGTTCG-------------T----TTC--CCC-------------GATTAAAAGGCGAATTTCATGA--GCCCCCC--------CTCA---------A--TCTGACTTTTGT-C------------------T----CA-----------A---TCTCTGAC-C-----------------CC----T--CCCCGAC-TC---TGT----------C---T-CTCTCTC----T-----------------------------------------CT--CTTCT----------------CTG----T----CA-CTCA-TTGCATGATGGTTGTCC---TC-CT-CC-----AACCCACACAGCACAATATGGAGCATCATCTGAGCGGCGTGGGGCTAAGGGACTCCCAGCACAT
droFic1 scf7180000454044:874003-874263 + CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTA------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCC-----------CCAA----A---AACCCCCGACTTTTTACT------------------A-----------------C---TATCAGAC-C----------------CAT----TTCCCATGAACTC---TCG----------A---A----------------------------------------------------------TTTCTGT------GTCTCTCGATT-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATTCCACACAGCACAACATGGAGCACCACATGGGCGCACTGGGACTGAGGGAGTCACAGCACAT
droEle1 scf7180000491009:75029-75298 - CTCTCT--TTTCAGGGCAACCAATGCTTTCAATATTATTACAATTTCTA-G--------TTTCTG------------------------------TC----ACGCA--TTACTATAGTTGC-------------------------T-------------GATT-AAAGGCGAATTTCATAA--GACC-----------CAAA---------A--CCCGACTTTTGAAC------------------C-----------------CCCT--TCAGAA-CC---AC----------CCC---CTTCCACCGAACTC---TCT----------G---T-----TTT----T----------------------------------------------CTCTGA------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-GC-----ATCCCACACAGCACAACATGGAGCACCACATGGGCGGCGTGGGACTGAGGGACTCCCAGCACAT
droRho1 scf7180000780106:193306-193567 - CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--TTACAATAGTTCC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GACC-----------CAAA--------AT--CGCGTCTTTTGATC------------------A-----------------C---TCTCAGAA-C-----------------CC----TTCTCCAGAACTC---TCT----------A---T----------------------------------------------------------TTTCTGT------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATCCCACACAGCACAACATGGAGCACCACATGGGCGGCGTGGGCTTGAGGGACTCCCAGCACAT
droBia1 scf7180000302292:1279860-1280133 - CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTA------------------------------TC----CCGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCC-----------CAAA--------AA--CCCGACTTTTGTTC------------------A-----------------C---TCTCAGAC-CTCAGACCTTAG---ACAAT----TTCCCCTGATCTCTTCTTT----------C---T----------------------------------------------------------ATTCTGT------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATCCCACACAGCACAACATGGAGCACCACCTGGGCGGCGTGGGCCTGCGGGACTCGCAGCACAT
droTak1 scf7180000415386:179764-180045 + CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATAA--GCCC-----------CAAA----C---AA--CCCGACTTTTGTTC------------------A-----------------CTC-TCTCAGCT-CG---ACCTTCG---AACCT----TTCCCCTGATCTT---TCT----------G---A-----------------------------------------TCTCTT----TCT----ATTCTGCGTC----TCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----AACCCACACAGCACAACATGGAGCACCACCTGGGCGGCGTGGGCCTGAGGGACTCACAGCACAT
droEug1 scf7180000409663:244477-244752 - CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTTTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATAA--GCCCGA----AAAATAAAA--------AA--CAAGACTTTTGTTC------------------A-----------------C---TCTCAGAACCT---CT----G---AACCTTTA--CCCCTTGAACTC---TTT----------C---T------------------------------------------------------CT--GTTCTGT------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATTTCACACAGCACAACATGGAGCAGCACCTGGGCGGCGTTGGACTGAGGGACTCGCAGCACAT
dm3 chr2R:15060724-15060989 + CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------CTCTTCTCAGAA-TG---AA----G---TACCT----CTTCCCTGAC---TTCTAT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCAGCACATGGGTGGCGTGGGATTGAGGGATTCGCAACACAT
droSim2 2r:15711001-15711263 + CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C---TCTCAGAA-CG---AA----G---TTCCT----CTTCCCTGAC---TTCTAT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CATT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCACCACATGGGTGGCGTGGGATTGAGGGACTCCCAACACAT
droSec2 scaffold_1:12573550-12573812 + CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCT-------------------------C-------------AATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C---TCTCAGAA-CG---AA----G---TACCT----CTTCCCTGAC---TTCTAT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCACCACATGGGTGGCGTGGGATTGAGGGACTCCCAACACAT
droYak3 2R:14118330-14118593 - CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTACTA-G--------TGTCTG------------------------------TC--C-ACGCA--T-----TAGTTCC-------------------------T-------------TATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C---TCTCAGAC-CG---AA----G---AACCT----ATCCCGTGAC---TACTTT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCATCACCTGGGAGGCGTGGGATTGAGGGACTCCCAACACAT
droEre2 scaffold_4845:9260818-9261063 + CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTACTA-G--------AGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------TATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C-------------------------------C----TCCCCGTGAC---TTCTTT----------C---T----------------------------------------------------------ATTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCACCACTTGGGCGGCGTGGGATTGAGGGACTCCCAACACAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTCTCT--TTTCAGGGCAATCAATACTTTCAATATTATTACAATTTCTA-A--------AA-ATA------------------------------TTTCA-ACACC--T----TTTCCCCCTAGT------TACCTTCAATC---GC-------------GTTT-CAAGGCGAATTTCATAAAAGCTTCAG--------CTAA------------CCTAAG-----TTC------------------T-----------------C---TCTGAG---------------------------------------------------------------------------------T--ATTCAATT------CTG--TTAAT-------------------------TCATTCACTGTCGCT----CG-CTCA-TTGCATGC---TTGGCC-------C-----------ACACACAGCACAACATGGAACACC---TGGGCGCAGGTATTCTGCGCGACTCGCAGCACATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................AATC---GC-------------GTTT-CAAGGCGAATT....................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTGTCGCT----CG-CTCA-TTGCA............................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATT------CTG--TTAAT-------------------------TCATTCACT...................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACATGGAACACC---TGGGCGCAGG........................2611.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATGGAACACC---TGGGCGC...........................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................ATA------------------------------TTTCA-ACACC--T----TTTCCCCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCTGCGCGACTCGCA......2011.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................AAGCTTCAG--------CTAA------------CCTAAG-----TTC------------------T-----------------C---TC.....................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................CACC--T----TTTCCCCCTAGT------TACCTTCA.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AAGCTTCAG--------CTAA------------CCTAAG-----TTC------------------T-----------------C---TCT....................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTT-CAAGGCGAATTTCATAAA.............................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCT----CG-CTCA-TTGCATGC---TTG...................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCATGC---TTGGCC-------C-----------ACA..........................................................1811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTCTCT--TTTCAGGGCAATCAATACTTTCAATATTATTACAATTACTAAA--------TCTCTATATATATATATATATGAATATATGTATAAATC----ACCCACTT-----GAGTTCC-------------C------C--CTC-------------GATT-AAAGGCGAATTTCATAA--GCTTCAG--------CT----------------------------------------------A-----------------T---TCTCAAA-------------G---TTCTT----C---TCTC-T---TTCTATCTACCTGTCTCTCTCTCTATCTCTACTTCTTTGAGTCAATTCAATT------CTG--TTAAT-------------------------TCATTCATTGTCACT----CG-CTCACTTGCATG------CTCG---GC-CT-A----------CACACAGCACAACATGGAGCATC---TGGGCTCTGGCCTGCTGCGCGACGGCCAGCACATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---TGGGCTCTGGCCTGCTGCGCGAC...........2612.002000002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---TGGGCTCTGGCCTGCTGCGCGA............2512.002000002
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGCCTGCTGCGCGAC...........1911.001001000
..........................................................................................................CTT-----GAGTTCC-------------C------C--CTC-------------GATT-AAAGGCG........................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................G-CTCACTTGCATG------CTCG---GC-..........................................................................1911.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACATGGAGCATC---TGGG..............................2011.001000001
droGri2
CTCTCT--TTTCAGGGCAATCAATATTTTCAATATTATTACAATTACTA-A--------TTAA-A------------------------------TC--AGACCCA--TTCTCTTACCCCCTGATCTATTATACCCCCATCCCC-AA-------------ATCT-AAAGGCGAATTTCATAA--GCTACTCCGACTA--CTAG---------A--TCTAAG---TGTTC-------------------------------------------------------------------------TCTCTCTGAG--------------------------------------------T--CTTCAGTTGGTCATCTGATTTAATTCATT--CA--TTTGTCC------ATTTGTCATTG----T----CG-CTCA-TTGCATGCTCG---CTC---GGCCCAACAAAAAAAAAAACACAGTACAACATGGATCACAGCCTGGGGTCGGGAATTCTGCGTGATGCCCAACACATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TA---T--TTTCAGGGCAATCAATATTTTCAATACTATTATAATTTCTAAAATACACGTTCTTTG------------------------------TT----ACGA----TAGAAAAGTTCC-------------------------TAAAAATATGCTATAATA-AAAGGCGAATTTCATGA--CTT--------------------------------AG---TCT-CTT---------------------------TTGAACCCC------------------------------------CCACTTCAT---T----------------------------------------------------------------------------------TCTAATATTGTTT-----AG-TACT----CA-----------CA----TTGACCCCCAA-TT-CC-----A--TTACACAGCACAACATGGAACAACAT--CATCTC-TCTGGATTCCGCGACTCGCAGCACATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................AAAATATGCTATAATA-AAAGGCG........................................................................................................................................................................................................................................................................................................................................................................2311.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAT--CATCTC-TCTGGATTCCGCGA............2511.00100010
....................................ATTATAATTTCTAAAATACACGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTC-TCTGGATTCCGCGACG..........2211.00110000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-TCTGGATTCCGCGACTCGCAGCACA.2611.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAT--CATCTC-TCTGGATTCCGCGA............2611.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC-TCTGGATTCCGCGACT..........2011.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--CATCTC-TCTGGATTCCGCGA............2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-TT-CC-----A--TTACACAGCAGG.................................................1980.13100010
dp5
CTCTCT--TTTCAGGGGAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACACA---------AGTTGC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC------------TAACCCAAAACAG--TCTCAG---TGT-CTCT--------CTCTATCACTCTCCGTCTCTGAGCCCCCT---------------------------CTCTA-------------------CCCACCCTTCT-------------------------------------------------CTT----TCTCTCCGT-CTCCGTCTCTGTCTCTCACT--CACT----GA-CTCA-TTGCATGCTCT---GCC---TC-CT-CC-----A---CACACAGCACAACATGGAGCACCATCTGGGTGGCGTGGGCCTGCGGGACTCGCAGCACATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCCTGCGGGACTCGCAGCAC..2411.0010100000000
...................................................................................................................AGTTGC-------------------------T-------------AATT-AAAGGCGAATTTCAT................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGGTGGCGTGGGCCTGT................2211.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGGTGGCGTGGGCCTGCGGG.............2311.0010100000000
droPer2
CTCTCT--TTTCAGGGGAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACACA---------AGTTGC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC------------TAACCGAAAACAG--CATCAG---TGT-CTCTCTCTCTCTCTCTATCACTCTCCGTCTCTGAGCCCCCT---------------------------CTCTA-------------------CCCACCCATCT-------------------------------------------------CTT----TCTCTCCGT-CTCCGTCTCTGTCTCTCAC-G-CACT----GA-CTCA-TTGCATGCTCT---GCC---TC-CT-CC-----A---CACACAGCACAACATGGAGCACCATATGGGAGGCGTGGGCCTGCGGGACTCGCAGCACATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGGCGTGGGCCTGCGGGACT..........2411.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCGTGGGCCTGCGGGACTC.........2311.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAGGCGTGGGCCTGCGGGACT..........2611.001000100
droAna3
TTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCT-----------CCAA--------CC--CAAGACTTTTGATC------------------T-----------------------TTTGAC-C-----------------CT----GCCCCTAGAC-TC---TGC----------C---C-CTCTTTG----T-----------------------------------------C---TCTCTAT------GTCTCGCGTTG-CACT----CATCTCA-TGTCACC----TTGTCG---AA-AT-CC-----ATTCCATACAGCACAACATGGAGCACC---TGAGCGGC---GGCTTGAGGGACTCGCAGCGCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTGAGGGACTCGCAGCGCAT2312.002100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTGAGGGACTCGCAGC....1911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACC----TTGTCG---AA-AT-CC-----ATTCC...........................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGGAGCACC---TGAGCGGC---GGCT...................2511.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCACC---TGAGCGGC---GGCT...................2111.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCACC---TGAGCGGC---GGCTT..................2211.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACC---TGAGCGGC---GGC....................1911.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAGGGACTCGCAGCGCAT2111.001000100
droBip1
TTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGAATG------------------------------TC----ACGCA--------TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCAACT--------CCAA---------C--CCCGACTTTTGATC------------------T-----------------------TTTGAA-CC---TG----CCCATGCCC----CTACCTTAGACTC---TGC----------C---CCCTCTTTG----T-----------------------------------------C---TCTCTAT------GTCT--TG-------TCGCCCATCTCA-TATCACC----TTGTCG---AA-AT-CC-----ATTCCATACAGCACAACATGGAGCACC---TAAGCGG---TGGCCTGAGGGACTCCCAGCGCATSizeHit CountTotal NormTotal
No Reads
droKik1
CTCTCTTATTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTAAG--------TGACTG------------------------------TCT-C-TCGCA--T-----TAGTTCG-------------T----TTC--CCC-------------GATTAAAAGGCGAATTTCATGA--GCCCCCC--------CTCA---------A--TCTGACTTTTGT-C------------------T----CA-----------A---TCTCTGAC-C-----------------CC----T--CCCCGAC-TC---TGT----------C---T-CTCTCTC----T-----------------------------------------CT--CTTCT----------------CTG----T----CA-CTCA-TTGCATGATGGTTGTCC---TC-CT-CC-----AACCCACACAGCACAATATGGAGCATCATCTGAGCGGCGTGGGGCTAAGGGACTCCCAGCACATSizeHit CountTotal NormTotal
No Reads
droFic1
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTA------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCC-----------CCAA----A---AACCCCCGACTTTTTACT------------------A-----------------C---TATCAGAC-C----------------CAT----TTCCCATGAACTC---TCG----------A---A----------------------------------------------------------TTTCTGT------GTCTCTCGATT-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATTCCACACAGCACAACATGGAGCACCACATGGGCGCACTGGGACTGAGGGAGTCACAGCACATSizeHit CountTotal NormTotal
No Reads
droEle1
CTCTCT--TTTCAGGGCAACCAATGCTTTCAATATTATTACAATTTCTA-G--------TTTCTG------------------------------TC----ACGCA--TTACTATAGTTGC-------------------------T-------------GATT-AAAGGCGAATTTCATAA--GACC-----------CAAA---------A--CCCGACTTTTGAAC------------------C-----------------CCCT--TCAGAA-CC---AC----------CCC---CTTCCACCGAACTC---TCT----------G---T-----TTT----T----------------------------------------------CTCTGA------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-GC-----ATCCCACACAGCACAACATGGAGCACCACATGGGCGGCGTGGGACTGAGGGACTCCCAGCACATSizeHit CountTotal NormTotal
No Reads
droRho1
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--TTACAATAGTTCC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GACC-----------CAAA--------AT--CGCGTCTTTTGATC------------------A-----------------C---TCTCAGAA-C-----------------CC----TTCTCCAGAACTC---TCT----------A---T----------------------------------------------------------TTTCTGT------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATCCCACACAGCACAACATGGAGCACCACATGGGCGGCGTGGGCTTGAGGGACTCCCAGCACATSizeHit CountTotal NormTotal
No Reads
droBia1
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTA------------------------------TC----CCGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATGA--GCCC-----------CAAA--------AA--CCCGACTTTTGTTC------------------A-----------------C---TCTCAGAC-CTCAGACCTTAG---ACAAT----TTCCCCTGATCTCTTCTTT----------C---T----------------------------------------------------------ATTCTGT------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATCCCACACAGCACAACATGGAGCACCACCTGGGCGGCGTGGGCCTGCGGGACTCGCAGCACATSizeHit CountTotal NormTotal
No Reads
droTak1
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATAA--GCCC-----------CAAA----C---AA--CCCGACTTTTGTTC------------------A-----------------CTC-TCTCAGCT-CG---ACCTTCG---AACCT----TTCCCCTGATCTT---TCT----------G---A-----------------------------------------TCTCTT----TCT----ATTCTGCGTC----TCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----AACCCACACAGCACAACATGGAGCACCACCTGGGCGGCGTGGGCCTGAGGGACTCACAGCACATSizeHit CountTotal NormTotal
No Reads
droEug1
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTTTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------GATT-AAAGGCGAATTTCATAA--GCCCGA----AAAATAAAA--------AA--CAAGACTTTTGTTC------------------A-----------------C---TCTCAGAACCT---CT----G---AACCTTTA--CCCCTTGAACTC---TTT----------C---T------------------------------------------------------CT--GTTCTGT------GTCTCTCGCTG-CACT----CA-CTCA-TTGCATG----TTGTCC---TC-CT-AC-----ATTTCACACAGCACAACATGGAGCAGCACCTGGGCGGCGTTGGACTGAGGGACTCGCAGCACATSizeHit CountTotal NormTotal
No Reads
dm3
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------CTCTTCTCAGAA-TG---AA----G---TACCT----CTTCCCTGAC---TTCTAT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCAGCACATGGGTGGCGTGGGATTGAGGGATTCGCAACACATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGCGTGGGATTGAGGGAT...........2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300101000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATTGAGGGATTCGCAACAC..2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGCGTGGGATTGAGG..............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000020000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGGGTGGCGTGGGATTGAGGG.............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGCGTGGGATTGAGGGA............2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGGGATTGAGGGAT...........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCACATGGGTGGCGTGGGATTGA................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGCGTGGGATTGAGGG.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGTGGCGTGGGATTGAGGG.............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGTGGGATTGAGGGAT...........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACATGGGTGGCGTGGGA....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGCGTGGGATTGAGGG.............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATTGAGGGATTCG........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGGGATTGAGGGATTCGC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGGGATTGAGGGATTC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACATGGAGCAGCACATGGGT.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGCGTGGGATTGAGGGATT..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCAGCACATGGGTGGCGTGGGA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CA-CTCA-TCGCATG----TTGTCC---T............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCC---TC-CT-AC-----AATTCACACA......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCAGCACATGGGTGGCGT........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGCGTGGGATTGAGGGT............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGGGATTGAGGGATTCGCA......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTGAGGGATTCGCAACA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TATTACAATTTCTA-G--------TGTCTG------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCACATGGGTGGCG.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCAGCACATGGGTGGC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGTGGGATTGAGGGATTCG........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGCGTGGGATTGA................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACACAGCACAACATGGAGCAGCACA..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGGAGCAGCACATGGGTGG...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGATTGAGGGATTCGCAACACAT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGTGGGATTGAGGGATTCGCAACC...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................TCTAT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCAC....................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AATTTCTA-G--------TGTCTG------------------------------TC----A..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACACAGCACAACATGGAGCAGCA....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCACAACATGGAGCAGCACATGG...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACATGGGTGGCGTGGGATTGA................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGGGATTGAGGGATT..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGGAGCAGCACATGGGT.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-CT-AC-----AATTCACACAGCACAACA..............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCC---TC-CT-AC-----AATTCACAC.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGGGATTGAGGGATTCGCAA.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACATGGGTGGCGTGGG.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCACATGGGTGGCGTGGGAT...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCACATGGGTGGCGTGGGAT...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCACATGGGTGGCGT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGGATTGAGGGATTCGCA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACATGGGTGGCGTGGGATT..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCACATGGGTGGCGTGGGATTGA................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGGATTGAGGGATTCG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAGCAGCACATGGGTGGCG.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAGCAGCACATGGGTGGC..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCAGCACATGGGTGGCGTGG......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACATGGGTGGCGTGGGATTGAGGG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAACATGGAGCAGCACAT.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGGATTGAGGGATTCGCAA.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCACATGGGTGGCGTG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGGATTGAGGGATTCGCAACA...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAGCAGCACATGGGTGGCGT........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTGAGGGATTCGCA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TCTTCTCAGAA-TG---AA----G---TACCT----CTTCCC................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGGTGGCGTGGGATTGAGG..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCAGCACATGGGTGT...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CT----CA-CTCA-TCGCATG----TTG...................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGGCGTGGGATTGAGGGATT..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droSim2
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------AATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C---TCTCAGAA-CG---AA----G---TTCCT----CTTCCCTGAC---TTCTAT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CATT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCACCACATGGGTGGCGTGGGATTGAGGGACTCCCAACACATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTTCTA-G--------TGTCTG------------------------------TC----ACGCA--T-----TAGTTCT-------------------------C-------------AATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C---TCTCAGAA-CG---AA----G---TACCT----CTTCCCTGAC---TTCTAT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCACCACATGGGTGGCGTGGGATTGAGGGACTCCCAACACATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGGTGGCGTGGGATTGAGGGACTC.........2911.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTG-CACT----CA-CTCA-TCGCATG----TTGTCC---T............................................................................2711.0010001
................................................................................................................................................................AATT-AAAGGCGAATTTCATA...............................................................................................................................................................................................................................................................................................................................................................2011.0011000
droYak3
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTACTA-G--------TGTCTG------------------------------TC--C-ACGCA--T-----TAGTTCC-------------------------T-------------TATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C---TCTCAGAC-CG---AA----G---AACCT----ATCCCGTGAC---TACTTT----------C---T----------------------------------------------------------TTTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCATCACCTGGGAGGCGTGGGATTGAGGGACTCCCAACACATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CT----CA-CTCA-TCGCATG----TTGTC.................................................................................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGGGATTGAGGGACTCCCA......2211.00101000000000
..........................................ATTACTA-G--------TGTCTG------------------------------TC--C-ACG............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGGGAGGCGTGGGATTGAGG..............2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGGATTGAGGGACTCCCAACA...2411.00100000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGGCGTGGGATTGAGGGACTCC........2711.00110000000000
droEre2
CTCTCT--TTTCAGGGCAACCAATACTTTCAATATTATTACAATTACTA-G--------AGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------T-------------TATT-AAAGGCGAATTTCATAA--GCCC-----------CTAA---------T--TCCGTCTTTTTATC------------------G-----------------C-------------------------------C----TCCCCGTGAC---TTCTTT----------C---T----------------------------------------------------------ATTCTCT------GTCTCTCACTG-CACT----CA-CTCA-TCGCATG----TTGTCC---TC-CT-AC-----AATTCACACAGCACAACATGGAGCACCACTTGGGCGGCGTGGGATTGAGGGACTCCCAACACATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................TA-G--------AGTCTG------------------------------TC----ACGCA--T-----TAGTTCC-------------------------..................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAGCACCACTTGGGCGGCG.........................2311.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAGCACCACTTGGGCGGCGTGG......................2611.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGTGGGATTGAGGGACTC.........2111.0010000100

Generated: 05/16/2015 at 10:24 PM