ID:

dvi_22253

 Coordinate:

scaffold_13052:929516-929666 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.3 -19.1 -19.1

Flybase annnotation

exon [dvir_GLEANR_60:2]; CDS [Dvir\GJ20569-cds]; intron [Dvir\GJ20569-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGTTCTTTTTGTTTTAAATAAAATAAAAAAGCTGGAAATATTTGGAAGCCAATAGAGAATTGCGAATCCTAAGCAAAGGATTATTCATATTTCGATCTGATCGCCATTGTGGCGATTAGCCAGCGACTGTGGAAATGAATATGCTCTGTATACTCTGTTTACTATCAATCACAATTTTGGGAAATCTACCATCACGTTCAGCCCACGGACAAATATTGCACCTATATAAGAAAAGTAATGAGCAGCTAAAT
*********************************************************************..............((((((..(((..((((((((((...))))))))))....))).)))))).........************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060684
140x9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 M061
embryo
 SRR060655
9x160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR060657
140_testes_total
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR1106712
embryo_0-2h
 M027
male body		 SRR060679
140x9_testes_total
..........................................TGGAAGCCAATAGAGAATTGCGAATCC...................................................................................................................................................................................... 27 0 1 3.00 3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0
.....................................................................TAAGCAAAGGATTATTCATATTTCGATC.......................................................................................................................................................... 28 0 1 2.00 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................GCCAGCGACTGTGGAAATGAATAT............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AATAAAAAAGCTGGAAATATTTG............................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TATTTGGAAGCCAATAGAGAATTGC............................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TATTCATATTTCGATCTGATCGCCATTGT............................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TACTCTGTTTACTATCAATCACAATT........................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TATTCATATTTCGATCTGAT...................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CATTGTGGCGATTAGCCAGCGACT........................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GATTAGCCAGCGACTGTGGAAATGAA................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GATTAGCCAGCGACTGTGGAAATG.................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TTGGGAAATCTACCATCACGTTCAGC................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ATGCTCTGTATACTGTGTTT........................................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CACGGACAAATATTGCACC............................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TATTCATATTTCGATCTGATCGCCATTG.............................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................ATTTCGATCTGATCGCCATTGTG............................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTGCACCTATATAAGAAAAGTAATGAGC........ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTGTGGAAATGAATATGCTCTGTATACT................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATTGCACCTATATAAGAAAAGT............... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTGGCGATTAGCCAGCGACT........................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TACTATCAATCACAATTTTGGGAAATC................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ATAAAAGAAAAAAGCTGGAAAT.................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TTGGGAAATCTACCATCACGTTCAGCC................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTAGCCAGCGACTGTGGAA..................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................GATTAGCCAGCGACTGTGGAAATGA................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GACTGTGGAAATGAATATGCTCT........................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CTGTATACTCTGTTTACTATCAAT.................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GACTGTGGAAATGAATATGCTCTGT...................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GACTGTGGAAATGAATATGCTCTGC...................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGCTCTGTATACTCTGTTTACTATCA.................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TGGGAAATCTACCATCACGTTCAGCC................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTGGCGATTAGCCAGCGACTG.......................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAATCTACCATCACGTTCAGCCCAC............................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TATTTCGATCTGATCGTCATTG.............................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................CAGCCCACGGACAAATATTGCACC............................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................GAAGCCAATAGAGAATTGCGAATCC...................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AAAATAAAAAAGCTGGAAATATT................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................AAAAGTAATGAGCAGCGA... 18 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTGGCGACTGGGCAGCGAC............................................................................................................................ 21 3 7 0.29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
............................................................................................................................................ATGCTCTGTCTACTTTGTTG........................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTGGCGACTGGGCAGCGA............................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GCAAGAAAAACAAAATTTATTTTATTTTTTCGACCTTTATAAACCTTCGGTTATCTCTTAACGCTTAGGATTCGTTTCCTAATAAGTATAAAGCTAGACTAGCGGTAACACCGCTAATCGGTCGCTGACACCTTTACTTATACGAGACATATGAGACAAATGATAGTTAGTGTTAAAACCCTTTAGATGGTAGTGCAAGTCGGGTGCCTGTTTATAACGTGGATATATTCTTTTCATTACTCGTCGATTTA
*************************************************************************************************************..............((((((..(((..((((((((((...))))))))))....))).)))))).........********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 M027
male body		 V053
head
 GSM1528803
follicle cells		 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
 M028
head
 V047
embryo
 SRR060672
9x160_females_carcasses_total
..............................................................GCTTAGTATTCGTTTCCTA.......................................................................................................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................GGCTTAGTATTCGTTTCCTA.......................................................................................................................................................................... 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................ACCCTTTAGGTGCTAGTGCAC..................................................... 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0
............................................................TCGCTTAGTATTCGTTTCC............................................................................................................................................................................ 19 2 6 0.17 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................TGTAGATCGTAGTGTAAGTCG................................................. 21 3 6 0.17 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................AACCCCTTTAGATCGTAGC......................................................... 19 3 10 0.10 1 0 0 0 0 0 1 0 0 0
...............................................................CTTAGTATTCGTTTCCTATTC....................................................................................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 0 1 0 0
..................................................................................................CTAGCGGTAAGGGCGCTAA...................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 1 0
.....................TTATTTTATCGACGTTTGTAA................................................................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................ATGGTATTGCAAGTGGGC............................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13052:929466-929716 - dvi_22253 CGTTCTTTTTGTTTTAAATAAAATAAAAAAGCTGGAAATATTT---------------------------------------GGAAGCCA-A--TAGAGAATTGCGAAT------------CCTAAGCAAAGGATTATTCATATTT-CGATCTGATCGCCATTGTGGCGATTAGCCAGCGA-CTGTGGAAATGAATATGCTCTGTATACTCTGTTTACTATCAATCACAATTTTGGGAAATCTACCATCACGTTCAGCCCACGGACAAATATTGCACCTATATAAGAAAAGTAATGAGCAGCTAAAT-------------
droMoj3 scaffold_6498:1291404-1291583 + CGC----------------------------------------------------------------GAACTGGATAGCATTT----------AAAGAGAATTAATACTCATATTTATAAGCATATA----------------TATTGAATCTGATCGCCATTTTGGCGATTAGCCTGGGATTTGTGGAAATGAATATTCT---AATTTGTTGTGTACTATCAATAACAATTTTTGAAAC---ATCGTCAGCGTC--------------------------------------------AGCTTCGTCATCATTAGGCAA
droGri2 scaffold_14822:86495-86757 + TTTG--------------------TTATTTAATAAACAAATATTTAAAAAAAACGTGATTTGAGTGCGAATTGGATAACGCTGAAGCATA-A--TAAGAAATTTTAAAT------------CCTTCGCAAGGGATTAC-CACATAT-TGTTCGCATCGCCATTTTGGCGATTAACCTGTGA-CTGTGGAAATGAATAT------TCTACTTTGTTTACTGTTAATAACAATTGTGGGAAATCTAACATCAAATTCTGCCTACGGCCAAATACAATACACATCCAAAAATCATAATGACAAGCTTCAT-------------
droRho1 scf7180000772623:3285-3385 + ----------------------------------------------------------------------------------------------------------------------------------------------------GATCCGATCGCCCTTTTGAAGG------AGCGA-TAGTGGAGATGATTTT------AATTCTTAGTTTGCTGCTAATAGCAACTCTGGGAGATA---------------------------------------------AACATGACTACTGGTTGCAC-------------
droTak1 scf7180000415212:131468-131649 - AATT--------------------AAAATTACTGGAAATATAT---------------------------------------AAAGGCAATATAGAGAAAACTGCAACTGAAATCT--TAACTTAAG----------------AAGTGAATTAAATCGCCCTGTTGAAGG------AGCGA-TTGTGGAGATGAATTT------AATTCTTAGTGTGCTGCTAATAGCAACCCTGGGAGATA---------------------------------------------AATATGACCACAGGCTCCAC---TTAAGAGCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CGTTCTTTTTGTTTTAAATAAAATAAAAAAGCTGGAAATATTT---------------------------------------GGAAGCCA-A--TAGAGAATTGCGAAT------------CCTAAGCAAAGGATTATTCATATTT-CGATCTGATCGCCATTGTGGCGATTAGCCAGCGA-CTGTGGAAATGAATATGCTCTGTATACTCTGTTTACTATCAATCACAATTTTGGGAAATCTACCATCACGTTCAGCCCACGGACAAATATTGCACCTATATAAGAAAAGTAATGAGCAGCTAAAT-------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................T---------------------------------------GGAAGCCA-A--TAGAGAATTGCGAAT------------CC.....................................................................................................................................................................................................2713.003000000000000000000000001001100000000000000000000000000000000000
...........................................................................................................................TAAGCAAAGGATTATTCATATTT-CGATC........................................................................................................................................................................2812.002000000000000000000000000010000000000000000000000000000000000001
.............................................................................................................................................................................GCCAGCGA-CTGTGGAAATGAATAT..........................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................AATAAAAAAGCTGGAAATATTT---------------------------------------G.............................................................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
......................................TATTT---------------------------------------GGAAGCCA-A--TAGAGAATTGC.......................................................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................TATTCATATTT-CGATCTGATCGCCATTGT...........................................................................................................................................................2911.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................TACTCTGTTTACTATCAATCACAATT........................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATTCATATTT-CGATCTGAT....................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................CATTGTGGCGATTAGCCAGCGA-CT........................................................................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................GATTAGCCAGCGA-CTGTGGAAATGAA.............................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GATTAGCCAGCGA-CTGTGGAAATG...............................................................................................................................2411.001000000010000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTGGGAAATCTACCATCACGTTCAGC..............................................................2611.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................CACGGACAAATATTGCACC..........................................1911.001000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................TATTCATATTT-CGATCTGATCGCCATTG............................................................................................................................................................2811.001000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................ATTT-CGATCTGATCGCCATTGTG..........................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTGCACCTATATAAGAAAAGTAATGAGC.....................2811.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................CTGTGGAAATGAATATGCTCTGTATACT..............................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATTGCACCTATATAAGAAAAGT............................2211.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................TTGTGGCGATTAGCCAGCGA-CT........................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TACTATCAATCACAATTTTGGGAAATC..............................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTGGGAAATCTACCATCACGTTCAGCC.............................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TTAGCCAGCGA-CTGTGGAA..................................................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................GATTAGCCAGCGA-CTGTGGAAATGA..............................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GA-CTGTGGAAATGAATATGCTCT.....................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................CTGTATACTCTGTTTACTATCAAT...............................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................GA-CTGTGGAAATGAATATGCTCTGT...................................................................................................................2511.001000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GA-CTGTGGAAATGAATATGCTCTGC...................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TGCTCTGTATACTCTGTTTACTATCA.................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................TGGGAAATCTACCATCACGTTCAGCC.............................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TGTGGCGATTAGCCAGCGA-CTG.......................................................................................................................................2211.001000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AAATCTACCATCACGTTCAGCCCAC..........................................................2511.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................CAGCCCACGGACAAATATTGCACC..........................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................GAAGCCA-A--TAGAGAATTGCGAAT------------CC.....................................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
...................AAAATAAAAAAGCTGGAAATATT......................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000010000000000000000000000
droMoj3
CGC----------------------------------------------------------------GAACTGGATAGCATTT----------AAAGAGAATTAATACTCATATTTATAAGCATATA----------------TATTGAATCTGATCGCCATTTTGGCGATTAGCCTGGGATTTGTGGAAATGAATATTCT---AATTTGTTGTGTACTATCAATAACAATTTTTGAAAC---ATCGTCAGCGTC--------------------------------------------AGCTTCGTCATCATTAGGCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................ATTTTGGCGATTAGCCTGGG............................................................................................................................................2011.001100000
...................................................................................................................................................................................................TATTCT---AATTTGTTGTGTACTATCA.................................................................................................2511.001100000
....................................................................................................................................................AATCTGATCGCCATTTTGG.........................................................................................................................................................1911.001000100
........................................................................................................................................................................GATTAGCCTGGGATTTGTGGAA..................................................................................................................................2211.001000001
...........................................................................................................................................................................................................................................GAAAC---ATCGTCAGCGTC--------------------------------------------AGCTTC...............2311.001000001
droGri2
TTTG--------------------TTATTTAATAAACAAATATTTAAAAAAAACGTGATTTGAGTGCGAATTGGATAACGCTGAAGCATA-A--TAAGAAATTTTAAAT------------CCTTCGCAAGGGATTAC-CACATAT-TGTTCGCATCGCCATTTTGGCGATTAACCTGTGA-CTGTGGAAATGAATAT------TCTACTTTGTTTACTGTTAATAACAATTGTGGGAAATCTAACATCAAATTCTGCCTACGGCCAAATACAATACACATCCAAAAATCATAATGACAAGCTTCAT-------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................AAAACGTGATTTGAGTGCGAATTG.......................................................................................................................................................................................................................................................2411.00110
............................................................................................................................................................................AACCTGTGA-CTGTGGAAATG...............................................................................................................................2011.00110
.................................................................................................................................AGGGATTAC-CACATAT-TGTTC........................................................................................................................................................................2111.00110
.........................................................ATTTGAGTGCGAATTGGATAAC.................................................................................................................................................................................................................................................2211.00101
..............................................................................................................................................................................................................................AATAACAATTGTGGGAAATCTAACATC.......................................................................2711.00101
..................................................................................................................................GGGATTAC-CACATAT-TGTTCGCATCG..................................................................................................................................................................2611.00110
droRho1
----------------------------------------------------------------------------------------------------------------------------------------------------GATCCGATCGCCCTTTTGAAGG------AGCGA-TAGTGGAGATGATTTT------AATTCTTAGTTTGCTGCTAATAGCAACTCTGGGAGATA---------------------------------------------AACATGACTACTGGTTGCAC-------------SizeHit CountTotal NormTotal
No Reads
droTak1
AATT--------------------AAAATTACTGGAAATATAT---------------------------------------AAAGGCAATATAGAGAAAACTGCAACTGAAATCT--TAACTTAAG----------------AAGTGAATTAAATCGCCCTGTTGAAGG------AGCGA-TTGTGGAGATGAATTT------AATTCTTAGTGTGCTGCTAATAGCAACCCTGGGAGATA---------------------------------------------AATATGACCACAGGCTCCAC---TTAAGAGCAGSizeHit CountTotal NormTotal
No Reads

Generated: 05/17/2015 at 05:24 AM