ID:

dvi_22182

 Coordinate:

scaffold_13052:1540424-1540689 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ15760-cds]; CDS [Dvir\GJ15760-cds]; exon [dvir_GLEANR_162:5]; exon [dvir_GLEANR_162:6]; intron [Dvir\GJ15760-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTTACATTTGAATGTAGATGCGTTGGAGACCCCACACCAACGGTTACATGGTACGCAATGGAATGCTAAAAGCCCATAAGTAGACCATATACTAAAAATTCTTAATATCTTGACCGTCTCTATGGAAGGCAAGCTGTGAAATCAGCGTAGCACAATAAATGAATACATGCACCCTTTTAATTTTGTAAAAAAACGACCCCGCACCTGGGATACATTAAATGTGTTTTACGATTAACGATTTGCCTTACAACAACTGCATGTATACTATTGCCTATAAGTAATAACTATTTCCCTCTGTGTACAACCGCATAAAAAGGTCCCATGGCGAGACAGTGTTGAGTGAAGGCAAAAGATATAAAATGTCAT
**************************************************(((((((..((...(((...)))((((.((.((((((.(((.(((......))).)))..))...))))))))))...((..((((......))))...))...........(((((((((...........((((......)))).(((......)))((((((...))))))....(((........)))............)))))))))..((((((......))))))........))..)))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V053
head
 M047
female body
 V116
male body		 V047
embryo
 M027
male body		 M061
embryo
 SRR060659
Argentina_testes_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060683
160_testes_total
 SRR1106729
mixed whole adult body
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR1106725
embryo_14-16h
 SRR060689
160x9_testes_total
......TTTGAATGTAGATGCGTTGGAGACC............................................................................................................................................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTTGAATGTAGATGCGTT...................................................................................................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGAATGTAGATGCGTTGGAGACC............................................................................................................................................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TGTAGATGCGTTGGAGACCCCAC........................................................................................................................................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................ATGGCGAGACAGTGTTGAGTGAAGGC................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................GGCTCATGGCGAGACAGTGTTGAGTG........................ 26 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................CACATGGTCCCATGGCGAGACA.................................. 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CAGTGTTGAGTGAAGGCAAAA............... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGATGCGTTGGAGACCCCACACC........................................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GATGCGTTGGAGACCCCACACCA....................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................ACAGTGTTGAGTGAAGGCAAA................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TAGATGCGCTGGAGACCCCACACC........................................................................................................................................................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................GTTGAGTGAAGGCAAAAG.............. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ATGTAGATGCGTTGGAGA................................................................................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TGTAGATGCGTTGGAGACCC.............................................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................GTTGAGTGAAGGCAAAAGATATAAAAT..... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................GTGTTGAGTGAAGGCAAAAGATATAAA....... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................GGCGAGACAGTGTTGAGT......................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............TAGATGCGTTGGAGACCCCA............................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...ACATTTGAATGTAGATGCGT....................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................GTTGAGTGAAGGCCAAAGA............. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................GGCGAGACAGTGTTGAGTGAAGGCA.................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TGTAGATGCGTTGGAGACC............................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................ACACCAACGGTTACATGGTCCCA...................................................................................................................................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TGGCGAGACAGTGTTGAGTGAAGGCA.................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTGAATGTAGATGCGTTGGAGACC............................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTGAACGTAGATGCGTTGGAGACC............................................................................................................................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................GAGACAGTGTTGAGTGAA...................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTTGAATGTAGATGCGTTGGAGACCCC............................................................................................................................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................AGTGTTGAGTGAAGGCACAAGAT............ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GAATGTAGATGCGTTGGAGACCCCACA.......................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................GAGACAGTGTTGAGTGAAGGCA.................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...ACATTTGAATGTAGATGCGTT...................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................GAGACAGTGTTGAGTGAAG..................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................AGTGTTGAGTGAAGGCAAA................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CAGTGTTGAGTGAAGGCAAAAGAT............ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTTTAAGTCTGTAAAAAAAC............................................................................................................................................................................ 20 2 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0
......................................................GCAATGGAAGGCTAACAGC..................................................................................................................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCTGTAATTTTGTAAAAAAA............................................................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................CATGCACCCTCGTAATTTTCT.................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................CGAAGGCAAATGATATAAAGT..... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................GTTTAACGATTAAAGATTT............................................................................................................................. 19 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................CTTTTAAGTCTGTAAAAAAA............................................................................................................................................................................. 20 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................TTTAAGTCTGTAAAAAAAC............................................................................................................................................................................ 19 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................CCCATTTCATTTAGTAAAAAA.............................................................................................................................................................................. 21 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................TGGTAAGCCATGGGATGCT........................................................................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................GAACATATACTAAAAATTG......................................................................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATTTTAAGTCTGTAAAAAAAC............................................................................................................................................................................ 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CAATGTAAACTTACATCTACGCAACCTCTGGGGTGTGGTTGCCAATGTACCATGCGTTACCTTACGATTTTCGGGTATTCATCTGGTATATGATTTTTAAGAATTATAGAACTGGCAGAGATACCTTCCGTTCGACACTTTAGTCGCATCGTGTTATTTACTTATGTACGTGGGAAAATTAAAACATTTTTTTGCTGGGGCGTGGACCCTATGTAATTTACACAAAATGCTAATTGCTAAACGGAATGTTGTTGACGTACATATGATAACGGATATTCATTATTGATAAAGGGAGACACATGTTGGCGTATTTTTCCAGGGTACCGCTCTGTCACAACTCACTTCCGTTTTCTATATTTTACAGTA
**************************************************(((((((..((...(((...)))((((.((.((((((.(((.(((......))).)))..))...))))))))))...((..((((......))))...))...........(((((((((...........((((......)))).(((......)))((((((...))))))....(((........)))............)))))))))..((((((......))))))........))..)))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 V116
male body		 M027
male body		 M047
female body
 SRR060679
140x9_testes_total
 SRR060688
160_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
 V053
head
...........................CTTGGGTGTGGCTGCCAA................................................................................................................................................................................................................................................................................................................................. 18 2 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................TGGTATATGATGATTAAGAAATA.................................................................................................................................................................................................................................................................... 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GGGGACCCTATGCAATTT................................................................................................................................................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TGGTATATGATGATTAAGAAA...................................................................................................................................................................................................................................................................... 21 3 5 0.40 2 0 1 0 0 1 0 0 0 0 0 0 0
...........................CTTGGGTGTGGCTGCCAAA................................................................................................................................................................................................................................................................................................................................ 19 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATTTTTTTGTTGGAGCTTGGA................................................................................................................................................................ 21 3 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................TCCGTTTTCTCCATTTTAC.... 19 2 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
...................................TGGCTGCCAATATATCATG........................................................................................................................................................................................................................................................................................................................ 19 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................CGGGACCCTATGCAATTT................................................................................................................................................... 18 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CTGGCTGAGAAACCTACCGT........................................................................................................................................................................................................................................... 20 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................ATATTTAAGAATTATAGAAA.............................................................................................................................................................................................................................................................. 20 2 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................TGCTAATTGCTACAGGGT......................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................AGTCGCATTGTGGTATTTT.............................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................................................................................................CACATGTTGGCTGATTATT................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
..........................TCAGGGGTGTGGTAGGCA.................................................................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13052:1540374-1540739 + dvi_22182 GTTACATTTGAATGTAGATGCGTTGGAGACCCCACACCAACGGTTACATGGTACGCAATGGAATGCTAAAAG--------------------------CCCATAA--------------------------------GTAGACCATA--------------------------------------------------TACTAAAAATTCTTAATATCTTGACCGTCTCTATGGAAGGCAAGCTGT--------GAAATCAGCGTAGCACAATAAATGAATACATGCAC-----------------------CCTTTTAAT---T-----TTGTAAA-------------------------AAAACGAC----------------------------------------------------------------------------------CCCG-CACCTGGGATACAT--------------------------------------TAAATGT---------------------GTTTTACGATTA-----------------------------------------------------ACG-----------------ATTTGCCTTACAACAACTGCATGTATACTATTGCCTATAAGTAATAACTATTTCCCTCTGTGTACAACCGCAT-A-A-AAAGGTCCCATGGCGAGACAGTGTTGAGTGAA---GGCAAAAGATATAAAATGTCAT
droMoj3 scaffold_6498:546055-546346 + GTAACATTTGAATGTAGATGCGTTGGAGAACCCACCCCAACGGTTACATGGTACGAAAATTCAAATTTAAAT--------------------------TCTAAAT--------------------------------ATTGAAAAAA--------------------------------------------------ATCAAAGTGCTCCTAAAACTTTGATCT------------------------------------------------------------------------TAACAAAAAAGAGCAAAGAGCAAACAAA----------------------------------------------------AGCGATAC--------GACAG------------------------------------------------------CACA-TTTGAGCAATGATG------------------------------------------------------------------------------------------CTTGC---AAACA----------AAACTGTTG---------CTATG-----TATAAGGTAATGATTTC-----------------------------------------------CCTCTGTGTACAATCAAATTG-C-AAAGGTCCCATGGAGAGACAGTGCTAACTGAG---GGAAAACGCTACAAAATGTCAC
droGri2 scaffold_14822:546028-546105 + GTAACATTTGAATGTAGATGCGTTGGAGATCCCACTCCGACGGTTACATGGTACGAAATCCAA-GCAATAAG--------------------------CCTCTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:1670230-1670487 + GTAACGTTTGAATGCAGATGCGTGGGTGATCCCACACCAACTGTCACATGGTACGCAAAAAAA-AAAAA-AATTA-AAATAAACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCACAAAATTGAAATTATCCAAGATGGTTGTG--------------------------------AATGAATAATCAATTATC------------------------------------------TGAGAAACGACCC-------------------------------------------------------G---A--CGACCCAATGTACA-TAAATGTAT---------TTGTA-----TTTCTCC-ATCTTCGTC-----------------------------------------------TCCATGT-C-----------A-A-AAAGGTCCCATGGCGAGACAGTACTGAGTGAG---GGCAAACGTTACAAAATGTCAC
dp5 Unknown_group_10:49492-49554 + CTCTTATTTGAGTGCCGCGTCAATGCAGATCCCTTGCCAAACATTACTTGGTTCCACAATGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_42:553137-553473 + GTAACATTTGAGTGTAGATGTGTCGGAGATCCCACGCCTACAGTGACATGGTACGGATATAAG-TGAAT-AATATT------------------C--AT--GTTTGCACACACAAGCACACGCACACACACACAGGAATACGTATTACGTA---------------------A------------------ACTA--------------------------------------------------------AACTA-TG-----------------------------GAACTGATTGAACATGG-AACCGAACTCCATTTGA----------------------------------------------------------TATTAGCCATTT---TTGTGTGGTAGATGATCCTAACACAATTGCAAACTGAATTAAATACTCAATTATA------------------------------------------TCAG-----------------------------------------------------------------------------------AATCCT---------------TTGTT-----TATATTCAACTATTTTC-----------------------------------------------TTAATGTGC-----------A-C-AAAGGTCCCATGGAGAAACTGTGCTGAGTGAG---GGCAAACGCTACAAAATGTCAT
droAna3 scaffold_13089:585232-585505 + GTAACGTTTGAATGCAGATGCGTCGGAGAACCCATGCCGACAGTCACATGGTACGGATATAAT-GTAAC-TAAAT-ATTTAAACCGATACG--ATATGTATGTAT--------------------------------------------------ATTTATACACGTAG-----------------------------------------------------------------------------------------------------------------------------------------AAGAGAAAAACAGTTGGA-----TTCGATG-------------------------CATGATAG----------------------------------------------------------------------------------CCGC-TTTAGGCGCTTTAG---------------------------------------------------------------------------------GAACACATATTTGA-------------------AATTGTAA---------ATATT-----TATATGAAATTTTTTTC-----------------------------------------------TTAATGTGC-----------A-C-CAAGGTCCCATGGCGAGACTATTCTAAGCGAA---GGAAATCGTTACAAAATGTCAT
droBip1 scf7180000395575:33882-34160 - GTAACGTTTGAATGCAGATGCGTCGGAGATCCCATGCCGACAATCACATGGTACGAAAATAAT-CTAAA-AAAAT-AATTAAACCCATACATAATATGTATATA-------------------------------------------TGTATGAAATTAATAAACGTAG---------------------------------------------------------------------------------------------------------------------------------------------AAAAAACAGTTGAA-----TACGAAG-------------------------CATGATAG----------------------------------------------------------------------------------CCGC-TATAGGCG---------------------------------------------------------------------------------------GAACACATCTTTGA---A----------AAGCTTACTGTAA---------ATATT-----TATATACAATTTTTTTC-----------------------------------------------TTAATATGC-----------A-T-AAAGGTCCCATGGCGAGACTATTCTAAGCGAA---GGAAAACGCTACAAAATGTCAT
droKik1 scf7180000301758:4163-4434 + GTTACATTCGAGTGTCGTTGTGTAGGAGATCCCAAGCCAACAGTTATATGGTACGGAAAATAA-TTAATA--------------------------------------------------------------------TTTACTATATGATAA-------------------------------------------------------------------------------------------------------------------------------------------AAATTAAAAAATTCGT-----------ATCGAAA-AAATGGTAA-------------------------CATGAAAG----------------------------------------------------------------------------------CCGC-CGA-----------------------------------------------ATTTTAAAT---------------------ATTTAAATA---------AAA---TG---TGTAACCAAAAATGGTACTT--TGTAAATACGTTTCATATC-----AAT-ACAAAACCTATTT-----------------------------------------------TC------C-----------ACC-AAAGGTCCCATGGCGAGACTATTCTTAGCGATGACGGCAAACGCTACAAAATGTCAT
droFic1 scf7180000454040:341962-342271 + GTAACTTTCGAGTGTAGATGCGTCGGAGATCCAACGCCAACGGTCACATGGTACGAAATTTAT-ATAATCAACACA------------------T--GT--A------------------------------------TTCATATAATATA---------------------A--------------------------------------------------------------------------------TATACC---------------------------------TGATTAACCAAGGAGATCGAAAAGCAATCGAA-----CGGCTAG-------------------------CATTTGAG----------------------------------------------------------------------------------CCTA-CATCAGTT-----------------------------------------------ATATTTATAAAAAAAATATAAATAAATCCCACTTCCACCGGGTTACC---G-G-ATTCGA-----------TTCACTGTAT---------AAGCT-----TCAATAAAATTCCTTTT-----------------------------------------------TTCATGTGC-----------A-A-AAAGGTCACATGGTGAGACTATACTTAGCGAG---TCCAAACGCTACAAAATGTCAC
droEle1 scf7180000491238:462419-462772 - GTAACGTTCGAGTGTAGATGCGTCGGAGATCCCACGCCAACAGTCACATGGTACGAAAA-AAC-ATTATCAGCATA------------------T--GTATA-----------------------------------ATTCACCGTATGAA---------------------AACT-ACAGTAACAAGTAAGGCC-------------------------------------------AACTTAC--------AAGAAC---------------------------------AGATTAACTCAAGAAATCGAAATGCATTCGGA-----CCGGAAG-------------------------CATGAGAG----------------------------------------------------------------------------------CCCC-CACACGAGATATCTTTTTGATAG-------------ATAGG---------ATTTTACCT---------------------ATTTCACGGCCGACGGATTACC---G---CTTCGACTGAAATTTAACTCACTGTA---------CACGTT-----TCACTCAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGTCCTAAATGAG---TCCAAACGCTACAAAATGTCAC
droRho1 scf7180000777286:50366-50707 - GTGACGTTCGAATGTAGATGCGTCGGAGATCCCACGCCAACAGTCACATGGTATGAACATATA----ATGAG--------------------------CATGTAA--------------------------------------------------ATTTACAACTGTATGAGAGTCC-----GATAAGTAAAGTAAATATCGA-----------------------------------TAT----CG----------------------------------------------------ATAAATAGATCGATTTGCATTCGGA-----CTGGAAG-------------------------CATGAGAG----------------------------------------------------------------------------------CCCC-T-CAAGTGATACATGTTCGACAGCAGTGTTTGTTAATCGACAAACGAACATTTTTGAAC---------------------ATTCAA--------------------------CGGCCGAAATTCTATTCACTGTAA---------ACGTT-----TCACTCAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTATACTAAACGAG---TCCAAACGCTACAGAATGTCCC
droBia1 scf7180000301495:665286-665534 + GTAACGTTCGAATGTAGATGCGTCGGAGATCCCACTCCAACAGTCACATGGTACGAAACTAAT-ATTAT-AATAAA------------------T--AT--C------------------------------------TTTACCATACGAAAG-------------------------------------------------------------------------------------------------------------------------------------------AGATCAAATAAACAGA-----------TCCGAAGTACCCGGTAG-------------------------AATGAGAG----------------------------------------------------------------------------------CCTC--ATAAGCGATTTCCGTTTTAAACAAATTATTG------------------------------------------------------------------------------------------------------------------TGTT-----TCAATCAAAAACTTTCC-----------------------------------------------TT------C-----------A-C-AAAGGTCCCATGGCGAGACTATACTAAACGAA---TCCAAACGCTACAAAATGTCAC
droTak1 scf7180000415288:78878-79233 + GTAACGTTCGAATGTAGATGCGTCGGAGATCCCACGCCCACAGTCACATGGTACGAAAATAAA-ATTATCAACATA------------------T--AT--C------------------------------------TTGAACATATGAA---------------------AATTCTCAGTGATAAGTAAAGTT-------------------------------------------AACCGGTTAACCAAACTAAAC---------------------------------AGATTAAGCAAAGAGATGCAAGTGTAATCGGAAGTGTCCGGTAG-------------------------CATGAGAG----------------------------------------------------------------------------------CCCCATATAAGTGATATCTGTTTTATACAAGCTGTTGTGTCTCAACAGATAATCA-------------------------------------------------------G---ATTCAACTAAAACCCAGTTCAC-----------TTCACGTT-----TCAATCAAAAACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTATACTAAGCGAA---TCCAAACGCTACAAAATGTCAC
droEug1 scf7180000408984:446981-447279 - GTAACCTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAGAAATCACATGGTACGACAACTAC-ATTAACAACATA------------------C--AT--A-----------------------------------ATTTACCA----------------------------------------------------------------------------------------------------------AAAAAGTC---------------------------------GGACTAATTAAAGTAATCTAAATGTACTCCGAATTGTATGGTAG-------------------------CATGAGAA-AACATAAGAGACAA--------CACAT------------------------------------------------------------ATAT---------------------------AGAATCAAAAT------------ATATATA-------------------------------------------------TAGAAAAAAAATCAATTCAC-----------TTCACGTT-----TCAATCAAATACTTTTC-----------------------------------------------TTCATATGT-----------A-CAAAAGGTCCCATGGCGAGACTATACTAAACAAA---TCCAAACGCTACAAAATGTCAC
dm3 chr4:749391-749677 + GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACAGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--AC--A------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTCAAATAAATTCGGATATATATGGTAGCAAAAAA----------------------AAAACAGCATAAGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAGAAATAAACG-------------------------------------------------------G---ATTCGACTAAAATTTAATTTAC------TTCACTTCT---ACACTTTCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGAACTAAACGAA---TCAAATCGCTACAAAATGTCTT
droSim2 4:562479-562776 + dsi_18001 GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACAGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTCAAATAAATTCGGATATATCTGGTAGCAAAAAAAAAAAAAAAAAAAAAAAC-----AAACAGCATAAGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAGAAATAAACG-------------------------------------------------------G---AATCGACTTAAATTAAATTTAC------TTCACTTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGAACTAAACGAA---TCCAATCGCTACAAAATGTCTT
droSec2 scaffold_30:466095-466382 + GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACAGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTCAAATAAATTCGGATATATCTGGTAGCAAAAAAAAAAA----------AAC-----AAACAGCATAAGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAGAAATAAACG-------------------------------------------------------G---ATTCGACTTAAATTAAATTTAC------TTCACTTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGAACTAAACGAA---TCCAATCGCTACAAAATGTCTT
droYak3 4:813692-814024 + GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACGGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--AT--A------------------------------------TTCACCATATGAA---------------------AATTCTCAATGAAAACTAA-------------------------------------------------T----TAAAA-AAAAAAAC---------------------------------AAATCAAACAGAGAGACTTAAATATATTTGGATATAT-TGATAG-------------------------CAAAAAAGCAGCATAGGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTAAATCAAGAAATAAACG-------------------------------------------------------G---ATTAAACTAAATCTTAATTTAC------TTCACTTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCTCATGGCGAGACTGTACTAAACGAA---TCCAATCGCTACAAAATGTCTG
droEre2 scaffold_4512:512604-512943 - der_305 GTAACGTTCGAGTGTAGATGCGTTGGAGATCCAACGCCAACAGTCATATGGTACGAAAATAAC-TTTATCGATATA-----------------AT--AT--A------------------------------------TTCACCATATGAA---------------------AATTCCCAATGATAAGTAATGTT-------------------------------------------TAT----TA------AAAAAC---------------------------------AAATCAAACAGAGAGACTCAAATATATTCGAATATATCTGATAGCAAAAAAAAAAA----------------AAAAACGGCATAGGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATGAAGAAAGAAACG-------------------------------------------------------G---ATTCGACTAAAATTTAATCTAC-----------TTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------CTTATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGTACTAAACGAA---TCCAATCGCTACAAAATGTCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTTACATTTGAATGTAGATGCGTTGGAGACCCCACACCAACGGTTACATGGTACGCAATGGAATGCTAAAAG--------------------------CCCATAA--------------------------------GTAGACCATA--------------------------------------------------TACTAAAAATTCTTAATATCTTGACCGTCTCTATGGAAGGCAAGCTGT--------GAAATCAGCGTAGCACAATAAATGAATACATGCAC-----------------------CCTTTTAAT---T-----TTGTAAA-------------------------AAAACGAC----------------------------------------------------------------------------------CCCG-CACCTGGGATACAT--------------------------------------TAAATGT---------------------GTTTTACGATTA-----------------------------------------------------ACG-----------------ATTTGCCTTACAACAACTGCATGTATACTATTGCCTATAAGTAATAACTATTTCCCTCTGTGTACAACCGCAT-A-A-AAAGGTCCCATGGCGAGACAGTGTTGAGTGAA---GGCAAAAGATATAAAATGTCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......TTTGAATGTAGATGCGTTGGAGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000000000000000000000000000000000000000000000000000000000000
......TTTGAATGTAGATGCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002020000000000000000000000000000000000000000000000000000000000000
........TGAATGTAGATGCGTTGGAGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000000000000000000000000000000000000000000000000000000000000
............TGTAGATGCGTTGGAGACCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGAGACAGTGTTGAGTGAA---GGC...................2611.001000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGTTGAGTGAA---GGCAAAA...............2111.001000000000000000001000000000000000000000000000000000000000000000
...............AGATGCGTTGGAGACCCCACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
................GATGCGTTGGAGACCCCACACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTGTTGAGTGAA---GGCAAA................2111.001000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTGAA---GGCAAAAG..............1811.001000000000000000000000000000000000000000000000000000000000001000
...........ATGTAGATGCGTTGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
............TGTAGATGCGTTGGAGACCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTGAA---GGCAAAAGATATAAAAT.....2711.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGAGTGAA---GGCAAAAGATATAAA.......2711.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGACAGTGTTGAGT............................1811.001000000000100000000000000000000000000000000000000000000000000000
..............TAGATGCGTTGGAGACCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
...ACATTTGAATGTAGATGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGACAGTGTTGAGTGAA---GGCA..................2511.001000000000000000000000000000000000000000000000000000000000000100
............TGTAGATGCGTTGGAGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGACAGTGTTGAGTGAA---GGCA..................2611.001000000000000000000000000000000000000000000000000000000000000010
.......TTGAATGTAGATGCGTTGGAGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGTGTTGAGTGAA---......................1811.001000000000000000001000000000000000000000000000000000000000000000
......TTTGAATGTAGATGCGTTGGAGACCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
.........GAATGTAGATGCGTTGGAGACCCCACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGTGTTGAGTGAA---GGCA..................2211.001001000000000000000000000000000000000000000000000000000000000000
...ACATTTGAATGTAGATGCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGTGTTGAGTGAA---G.....................1911.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTTGAGTGAA---GGCAAA................1911.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGTTGAGTGAA---GGCAAAAGAT............2411.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
GTAACATTTGAATGTAGATGCGTTGGAGAACCCACCCCAACGGTTACATGGTACGAAAATTCAAATTTAAAT--------------------------TCTAAAT--------------------------------ATTGAAAAAA--------------------------------------------------ATCAAAGTGCTCCTAAAACTTTGATCT------------------------------------------------------------------------TAACAAAAAAGAGCAAAGAGCAAACAAA----------------------------------------------------AGCGATAC--------GACAG------------------------------------------------------CACA-TTTGAGCAATGATG------------------------------------------------------------------------------------------CTTGC---AAACA----------AAACTGTTG---------CTATG-----TATAAGGTAATGATTTC-----------------------------------------------CCTCTGTGTACAATCAAATTG-C-AAAGGTCCCATGGAGAGACAGTGCTAACTGAG---GGAAAACGCTACAAAATGTCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............AGATGCGTTGGAGAACCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAGACAGTGCTAACTGAG---GGAAAA................2811.001000001
.............GTAGATGCGTTGGAGAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAG---GGAAAACGCTACAAAATGC...2611.001000010
...................GCGTTGGAGAACCCACCCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................CCACCCCAACGGTTACATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAG---GGAAAACGCTACAAAAT.....2311.001100000
droGri2
GTAACATTTGAATGTAGATGCGTTGGAGATCCCACTCCGACGGTTACATGGTACGAAATCCAA-GCAATAAG--------------------------CCTCTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................ACTCCGACGGTTACATGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
droWil2
GTAACGTTTGAATGCAGATGCGTGGGTGATCCCACACCAACTGTCACATGGTACGCAAAAAAA-AAAAA-AATTA-AAATAAACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCACAAAATTGAAATTATCCAAGATGGTTGTG--------------------------------AATGAATAATCAATTATC------------------------------------------TGAGAAACGACCC-------------------------------------------------------G---A--CGACCCAATGTACA-TAAATGTAT---------TTGTA-----TTTCTCC-ATCTTCGTC-----------------------------------------------TCCATGT-C-----------A-A-AAAGGTCCCATGGCGAGACAGTACTGAGTGAG---GGCAAACGTTACAAAATGTCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........TGAATGCAGATGCGTGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGACAGTACTGAGT............................1811.00100001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTACTGAGTGAG---GGCAAA................2111.00100010
.......TTGAATGCAGATGCGTGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGAGTGAG---GGCAAACGT.............2111.00100010
.......TTGAATGCAGATGCGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCGAGACAGTACTGAGTGAG---GG....................2611.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGAGTGAG---GGCAAAC...............1911.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCATGGCGAGACAGT...................................1911.00101000
.......TTGAATGCAGATGCGTGGGTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGACAGTACTGAGTGAG---G.....................2011.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACTGAGTGAG---GGCAAAC...............2011.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGTACTGAGTGAG---GGC...................2111.00100100
dp5
CTCTTATTTGAGTGCCGCGTCAATGCAGATCCCTTGCCAAACATTACTTGGTTCCACAATGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................GCGTCAATGCAGATCCCTTGCCAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........AGTGCCGCGTCAATGCAGATCCCTTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
.......TTGAGTGCCGCGTCAATGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........AGTGCCGCGTCAATGCAGATCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
droPer2
GTAACATTTGAGTGTAGATGTGTCGGAGATCCCACGCCTACAGTGACATGGTACGGATATAAG-TGAAT-AATATT------------------C--AT--GTTTGCACACACAAGCACACGCACACACACACAGGAATACGTATTACGTA---------------------A------------------ACTA--------------------------------------------------------AACTA-TG-----------------------------GAACTGATTGAACATGG-AACCGAACTCCATTTGA----------------------------------------------------------TATTAGCCATTT---TTGTGTGGTAGATGATCCTAACACAATTGCAAACTGAATTAAATACTCAATTATA------------------------------------------TCAG-----------------------------------------------------------------------------------AATCCT---------------TTGTT-----TATATTCAACTATTTTC-----------------------------------------------TTAATGTGC-----------A-C-AAAGGTCCCATGGAGAAACTGTGCTGAGTGAG---GGCAAACGCTACAAAATGTCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTGCTGAGTGAG---GGCA..................2112.002000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGCTGAGTGAG---GGCAAACG..............2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTGCTGAGTGAG---GGC...................2011.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTGCTGAGTGAG---GG....................1911.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCTGAGTGAG---GGCA..................1911.001000001
..........AGTGTAGATGTGTCGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTGCTGAGTGAG---GGCAAACGCT............2711.001000001
.............................................................................................................................................GTATTACGTA---------------------A------------------ACTA--------------------------------------------------------AACTA-TG-----------------------------GAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGTGAG---GGCAAACGCT............1911.001000001
.............GTAGATGTGTCGGAGATCCCACGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.....ATTTGAGTGTAGATGTGTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAAACTGTGCTGAGTGAG---GGCA..................2711.001000001
droAna3
GTAACGTTTGAATGCAGATGCGTCGGAGAACCCATGCCGACAGTCACATGGTACGGATATAAT-GTAAC-TAAAT-ATTTAAACCGATACG--ATATGTATGTAT--------------------------------------------------ATTTATACACGTAG-----------------------------------------------------------------------------------------------------------------------------------------AAGAGAAAAACAGTTGGA-----TTCGATG-------------------------CATGATAG----------------------------------------------------------------------------------CCGC-TTTAGGCGCTTTAG---------------------------------------------------------------------------------GAACACATATTTGA-------------------AATTGTAA---------ATATT-----TATATGAAATTTTTTTC-----------------------------------------------TTAATGTGC-----------A-C-CAAGGTCCCATGGCGAGACTATTCTAAGCGAA---GGAAATCGTTACAAAATGTCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............TGCAGATGCGTCGGAGAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100001
.TAACGTTTGAATGCAGATGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATTCTAAGCGAA---GGA...................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTTTTC-----------------------------------------------TTAATGTGC-----------A-C-CAA......................................................2411.001010000
.....GTTTGAATGCAGATGCGTCGGAGAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCGAGACTATTCTAAGC............................2111.001010000
...............AGATGCGTCGGAGAACCCATGCCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
......TTTGAATGCAGATGCGTCGGAGAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...ACGTTTGAATGCAGATGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............TGCAGATGCGTCGGAGAACCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................GGAGAACCCATGCCGACAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAA---GGAAATCGTTACA.........1911.001000010
..........AATGCAGATGCGTCGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCATGGCGAGACTATTCTAAGCG...........................2611.001100000
.......TTGAATGCAGATGCGTCGGAGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAA---GGAAATCGTTACA.........2011.001000010
............TGCAGATGCGTCGGAGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTATTCTAAGCGAA---GGAAATC...............2311.001010000
.....GTTTGAATGCAGATGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................CGTCGGAGAACCCATGCCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
GTAACGTTTGAATGCAGATGCGTCGGAGATCCCATGCCGACAATCACATGGTACGAAAATAAT-CTAAA-AAAAT-AATTAAACCCATACATAATATGTATATA-------------------------------------------TGTATGAAATTAATAAACGTAG---------------------------------------------------------------------------------------------------------------------------------------------AAAAAACAGTTGAA-----TACGAAG-------------------------CATGATAG----------------------------------------------------------------------------------CCGC-TATAGGCG---------------------------------------------------------------------------------------GAACACATCTTTGA---A----------AAGCTTACTGTAA---------ATATT-----TATATACAATTTTTTTC-----------------------------------------------TTAATATGC-----------A-T-AAAGGTCCCATGGCGAGACTATTCTAAGCGAA---GGAAAACGCTACAAAATGTCATSizeHit CountTotal NormTotal
No Reads
droKik1
GTTACATTCGAGTGTCGTTGTGTAGGAGATCCCAAGCCAACAGTTATATGGTACGGAAAATAA-TTAATA--------------------------------------------------------------------TTTACTATATGATAA-------------------------------------------------------------------------------------------------------------------------------------------AAATTAAAAAATTCGT-----------ATCGAAA-AAATGGTAA-------------------------CATGAAAG----------------------------------------------------------------------------------CCGC-CGA-----------------------------------------------ATTTTAAAT---------------------ATTTAAATA---------AAA---TG---TGTAACCAAAAATGGTACTT--TGTAAATACGTTTCATATC-----AAT-ACAAAACCTATTT-----------------------------------------------TC------C-----------ACC-AAAGGTCCCATGGCGAGACTATTCTTAGCGATGACGGCAAACGCTACAAAATGTCATSizeHit CountTotal NormTotal
No Reads
droFic1
GTAACTTTCGAGTGTAGATGCGTCGGAGATCCAACGCCAACGGTCACATGGTACGAAATTTAT-ATAATCAACACA------------------T--GT--A------------------------------------TTCATATAATATA---------------------A--------------------------------------------------------------------------------TATACC---------------------------------TGATTAACCAAGGAGATCGAAAAGCAATCGAA-----CGGCTAG-------------------------CATTTGAG----------------------------------------------------------------------------------CCTA-CATCAGTT-----------------------------------------------ATATTTATAAAAAAAATATAAATAAATCCCACTTCCACCGGGTTACC---G-G-ATTCGA-----------TTCACTGTAT---------AAGCT-----TCAATAAAATTCCTTTT-----------------------------------------------TTCATGTGC-----------A-A-AAAGGTCACATGGTGAGACTATACTTAGCGAG---TCCAAACGCTACAAAATGTCACSizeHit CountTotal NormTotal
No Reads
droEle1
GTAACGTTCGAGTGTAGATGCGTCGGAGATCCCACGCCAACAGTCACATGGTACGAAAA-AAC-ATTATCAGCATA------------------T--GTATA-----------------------------------ATTCACCGTATGAA---------------------AACT-ACAGTAACAAGTAAGGCC-------------------------------------------AACTTAC--------AAGAAC---------------------------------AGATTAACTCAAGAAATCGAAATGCATTCGGA-----CCGGAAG-------------------------CATGAGAG----------------------------------------------------------------------------------CCCC-CACACGAGATATCTTTTTGATAG-------------ATAGG---------ATTTTACCT---------------------ATTTCACGGCCGACGGATTACC---G---CTTCGACTGAAATTTAACTCACTGTA---------CACGTT-----TCACTCAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGTCCTAAATGAG---TCCAAACGCTACAAAATGTCACSizeHit CountTotal NormTotal
No Reads
droRho1
GTGACGTTCGAATGTAGATGCGTCGGAGATCCCACGCCAACAGTCACATGGTATGAACATATA----ATGAG--------------------------CATGTAA--------------------------------------------------ATTTACAACTGTATGAGAGTCC-----GATAAGTAAAGTAAATATCGA-----------------------------------TAT----CG----------------------------------------------------ATAAATAGATCGATTTGCATTCGGA-----CTGGAAG-------------------------CATGAGAG----------------------------------------------------------------------------------CCCC-T-CAAGTGATACATGTTCGACAGCAGTGTTTGTTAATCGACAAACGAACATTTTTGAAC---------------------ATTCAA--------------------------CGGCCGAAATTCTATTCACTGTAA---------ACGTT-----TCACTCAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTATACTAAACGAG---TCCAAACGCTACAGAATGTCCCSizeHit CountTotal NormTotal
No Reads
droBia1
GTAACGTTCGAATGTAGATGCGTCGGAGATCCCACTCCAACAGTCACATGGTACGAAACTAAT-ATTAT-AATAAA------------------T--AT--C------------------------------------TTTACCATACGAAAG-------------------------------------------------------------------------------------------------------------------------------------------AGATCAAATAAACAGA-----------TCCGAAGTACCCGGTAG-------------------------AATGAGAG----------------------------------------------------------------------------------CCTC--ATAAGCGATTTCCGTTTTAAACAAATTATTG------------------------------------------------------------------------------------------------------------------TGTT-----TCAATCAAAAACTTTCC-----------------------------------------------TT------C-----------A-C-AAAGGTCCCATGGCGAGACTATACTAAACGAA---TCCAAACGCTACAAAATGTCACSizeHit CountTotal NormTotal
No Reads
droTak1
GTAACGTTCGAATGTAGATGCGTCGGAGATCCCACGCCCACAGTCACATGGTACGAAAATAAA-ATTATCAACATA------------------T--AT--C------------------------------------TTGAACATATGAA---------------------AATTCTCAGTGATAAGTAAAGTT-------------------------------------------AACCGGTTAACCAAACTAAAC---------------------------------AGATTAAGCAAAGAGATGCAAGTGTAATCGGAAGTGTCCGGTAG-------------------------CATGAGAG----------------------------------------------------------------------------------CCCCATATAAGTGATATCTGTTTTATACAAGCTGTTGTGTCTCAACAGATAATCA-------------------------------------------------------G---ATTCAACTAAAACCCAGTTCAC-----------TTCACGTT-----TCAATCAAAAACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTATACTAAGCGAA---TCCAAACGCTACAAAATGTCACSizeHit CountTotal NormTotal
No Reads
droEug1
GTAACCTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAGAAATCACATGGTACGACAACTAC-ATTAACAACATA------------------C--AT--A-----------------------------------ATTTACCA----------------------------------------------------------------------------------------------------------AAAAAGTC---------------------------------GGACTAATTAAAGTAATCTAAATGTACTCCGAATTGTATGGTAG-------------------------CATGAGAA-AACATAAGAGACAA--------CACAT------------------------------------------------------------ATAT---------------------------AGAATCAAAAT------------ATATATA-------------------------------------------------TAGAAAAAAAATCAATTCAC-----------TTCACGTT-----TCAATCAAATACTTTTC-----------------------------------------------TTCATATGT-----------A-CAAAAGGTCCCATGGCGAGACTATACTAAACAAA---TCCAAACGCTACAAAATGTCACSizeHit CountTotal NormTotal
No Reads
dm3
GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACAGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--AC--A------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTCAAATAAATTCGGATATATATGGTAGCAAAAAA----------------------AAAACAGCATAAGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAGAAATAAACG-------------------------------------------------------G---ATTCGACTAAAATTTAATTTAC------TTCACTTCT---ACACTTTCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGAACTAAACGAA---TCAAATCGCTACAAAATGTCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.TAACGTTCGAGTGTAGATGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTGTAGATGCGTTGGAGATCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGTGTAGATGCGTTGGAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACGCCAACAGTCACATGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATGGTAGCAAAAAA----------------------AAAACAGCATA............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATATA------------------T--AC--A------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTAAACGAA---TCAAATCGCTACA.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT---ACACTTTCT-ACAAATACTTTTC-----------------------------------------------.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACGTTCGAGTGTAGATGCGTTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........AGTGTAGATGCGTTGGAGATCCCACGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AC-TTTATCGATATA------------------T--AC--A------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGTAGATGCGTTGGAGATCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCC.................................................2511.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCGAGACTGAACTAAATC...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------A-C-AAAGGTCCCATGGCGAGA.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTTCGAGTGTAGATGCGTTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AAAGGTCCCATGGCGAGACT.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAC------TTCACTTCT---ACACTTT................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGTAGATGCGTTGGAGATCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGAACTAAACGAA---TC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GATCCCACGCCAACAGTCACATGGTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TATA------------------T--AC--A------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGAGTGTAGATGCGTTGGAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGACTGAACTAAACGA..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TATATATGGTAGCAAAAAA----------------------A......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAA---TCAAATCGCTACA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGACTGAACTAAACGAA---T.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGTGTAGATGCGTTGGAGATCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGACTGAACTAAAC............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGATGCGTTGGAGATCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.TAACGTTCGAGTGTAGATGCGTTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGAGACTGAACTAAACG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATAAGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGT...........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAG...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCGAGACTGAACTAAACGAA---TCAAA.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGCCAACAGTCACATGGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAGA..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTCGAGTGTAGATGCGTTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GAGACTCAAATAAATTCGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGTTCGAGTGTAGATGCGTTGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTTCGAGTGTAGATGCGTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................TT----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTCAAATAAATTCGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......TTCGAGTGTAGATGCGTTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTAGATGCGTTGGAGATCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........AGTGTAGATGCGTTGGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTAAACGAA---TCAAAT................1880.2520000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAACGTTCGAGTGTAGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGACTGAACTATC.............................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACAGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTCAAATAAATTCGGATATATCTGGTAGCAAAAAAAAAAAAAAAAAAAAAAAC-----AAACAGCATAAGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAGAAATAAACG-------------------------------------------------------G---AATCGACTTAAATTAAATTTAC------TTCACTTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGAACTAAACGAA---TCCAATCGCTACAAAATGTCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................17205.701140000000000000114000
..........AGTGTAGATGCGTTGGAGATCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACTAAACGAA---TCC...................1812.00200200000000000000
........CGAGTGTAGATGCGTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGACTGAACTAA..............................1711.00100000001000000000
......TTCGAGTGTAGATGCGTTGGAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
.....................................CAACAGTCACATGGTACGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.....GTTCGAGTGTAGATGCGTTGGAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGGCGAGACTGAACTAAAC............................2211.00101000000000000000
.............GTAGATGCGTTGGAGATCCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................TAGCAAAAAAAAAAAAAAAAAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000001000000
...................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAC-----AA....................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000000000200000
.................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAC-----A.....................................................................................................................................................................................................................................................................................................................................................................................................25200.10200100000000010000
......................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAC-----AAA...................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000001000
....................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAC-----......................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAC-----AAACAGA...............................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000000001000
........................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAC-----......................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACAGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGAGACTCAAATAAATTCGGATATATCTGGTAGCAAAAAAAAAAA----------AAC-----AAACAGCATAAGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATTGAGAAATAAACG-------------------------------------------------------G---ATTCGACTTAAATTAAATTTAC------TTCACTTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGAACTAAACGAA---TCCAATCGCTACAAAATGTCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..AACGTTCGAGTGTAGATGCGTTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
.............GTAGATGCGTTGGAGATCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
droYak3
GTAACGTTCGAGTGTAGATGCGTTGGAGATCCCACGCCAACGGTCACATGGTACGAAAATAAC-TTTATCGATATA------------------T--AT--A------------------------------------TTCACCATATGAA---------------------AATTCTCAATGAAAACTAA-------------------------------------------------T----TAAAA-AAAAAAAC---------------------------------AAATCAAACAGAGAGACTTAAATATATTTGGATATAT-TGATAG-------------------------CAAAAAAGCAGCATAGGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTAAATCAAGAAATAAACG-------------------------------------------------------G---ATTAAACTAAATCTTAATTTAC------TTCACTTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------TTCATGTGC-----------A-C-AAAGGTCTCATGGCGAGACTGTACTAAACGAA---TCCAATCGCTACAAAATGTCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......TCGAGTGTAGATGCGTTGGAGATCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000000000
....CGTTCGAGTGTAGATGCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000
..........AGTGTAGATGCGTTGGAGATCCCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCGAGACTGTACTAAA.............................2011.00101000000000
...............................CCACGCCAACGGTCACATGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.......................TGGAGATCCCACGCCAACGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACTGTACTAAACGAA---TCCAATCGC.............2711.00101000000000
.....GTTCGAGTGTAGATGCGTTGGAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEre2
GTAACGTTCGAGTGTAGATGCGTTGGAGATCCAACGCCAACAGTCATATGGTACGAAAATAAC-TTTATCGATATA-----------------AT--AT--A------------------------------------TTCACCATATGAA---------------------AATTCCCAATGATAAGTAATGTT-------------------------------------------TAT----TA------AAAAAC---------------------------------AAATCAAACAGAGAGACTCAAATATATTCGAATATATCTGATAGCAAAAAAAAAAA----------------AAAAACGGCATAGGTGACAC--------CTTGT-----------------------------------------------------------------------------------------TGTGAATGAAGAAAGAAACG-------------------------------------------------------G---ATTCGACTAAAATTTAATCTAC-----------TTCACGTT-----TCT-ACAAATACTTTTC-----------------------------------------------CTTATGTGC-----------A-C-AAAGGTCCCATGGCGAGACTGTACTAAACGAA---TCCAATCGCTACAAAATGTCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........GAGTGTAGATGCGTTGGAGATCCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............GTAGATGCGTTGGAGATCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
GTAACGTTCGAGTGTAGATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......TCGAGTGTAGATGCGTTGGAGATCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..AACGTTCGAGTGTAGATGCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGTACTAAACGAA---TCCAATCG..............2411.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GT-----------------------------------------------------------------------------------------TGTGAATGAAGAAAGAAACG-------------------------------------------------------G---ATTC...........................................................................................................................................................................................2711.0010100000
GTAACGTTCGAGTGTAGATGCGTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..............................................................................................................................................................................................................................................................................................................................................AGCAAAAAAAAAAA----------------AAAAAC..................................................................................................................................................................................................................................................................................................................................................................................................2050.2011000000

Generated: 05/16/2015 at 08:57 PM