ID:

dvi_22087

 Coordinate:

scaffold_13052:1723575-1723725 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.1 -9.1 -9.1 -9.1

Flybase annnotation

CDS [Dvir\GJ18346-cds]; exon [dvir_GLEANR_29:16]; intron [Dvir\GJ18346-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTGTGATTATGTTCTATTCTTTTTACCTTTGTTTTTTGTCCTTAACATATGTATATACAAACATGGGCATATGTATATGTGTTTGCATTTGATATTTTCAGTTAGACATAAAAAAGTGTATTTTTCCTTATACTGTCGTTTCTGTCTATCTTGTCACTGTTCTTGGTGTTGTTCTTTTCTTTCTACTCGACTTGCGCTTAGATTCGTGTGGTGAACGCCTTCCGGCAAGGTCTTGATGCCCGTTACGGGGA
*****************************************************.....((......((((.......((((((((...((((.....)))).)))))))).....))))...))******************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060676
9xArg_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
 GSM1528803
follicle cells		 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060675
140x9_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060673
9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 SRR060679
140x9_testes_total
 SRR060654
160x9_ovaries_total
 SRR060655
9x160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060683
160_testes_total
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 M027
male body		 M028
head
 M061
embryo
 SRR060658
140_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060688
160_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060678
9x140_testes_total
 SRR1106717
embryo_6-8h
 SRR1106726
embryo_14-16h
 SRR060670
9_testes_total
 V053
head
 V047
embryo
............................................................................................................................................................................................GACTTGCGCTTAGATTCGTGT.......................................... 21 0 1 4.00 4 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCAGTTAGACATAAAAAAGTGTATTTT............................................................................................................................... 27 0 1 4.00 4 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TAGATTCGTGTGGTAAACGCATTCCGC.......................... 27 3 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCAGTTAGACATAAAAAAGTGTATTT................................................................................................................................ 26 0 1 3.00 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTGAACGCCTTCCGGCAAGGT.................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACGCCTTCCGGCAGGGTCTTG................ 21 1 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TATGTGTTTGCATTTGATATTTTCAGT..................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TATACAAACATGGGCATATGTATATGT........................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGTTAGACATAAAAAAGTGTATTT................................................................................................................................ 27 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTGCGCTTAGATTCGTGTGG........................................ 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GCGCTTAGATTCGTGTGGTGA..................................... 21 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................TTCTGTCTATCTTGTCACTGTTCTTGGT.................................................................................... 28 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGGATTCGTGTGGTGAACGC................................. 20 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GCGCTTGGATTCGTGTGGTGA..................................... 21 1 1 2.00 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTTTCTTTCTACTCGACTTGCGCTT.................................................... 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GATTCGTGTGGTGAACGCCTT.............................. 21 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TATTTTTCCTTATACTGTCGT................................................................................................................ 21 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTCGTGTGGTGAACGCCTTCCGGCAAGG..................... 28 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................CATGGGCATATGTGTATGTGT......................................................................................................................................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TCTTTCTACTCGACTTGCGCTTAGATT............................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTTATACTGTCGTTTCTGT.......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GTTCTTGGTGTTGTTCTTTTC........................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TCTATTCTTTTTACCTTTGTTTTTTGTCC.................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TTTCTACTCGACTTGCGCTTA................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGATTCGTGTGGTGAACGCCT............................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAGGTCTTGATGCCCGTTACG.... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CTACTCGACTTGCGCTTAGATT............................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CTTAGATTCGTGTGTTGAACG.................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GTTCTTTTCTTTCTACTCGAC............................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGGATTCGTGTGGTGAGCGCC................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GTCTATCTTGTCACTGTTCTTGGTGT.................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TTGTCACTGTTCTTGGTGTTGTTCTTT.......................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................CGCTTAGATTCGTGTGGTGAACGCCTT.............................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TACTGTCGTTTCTGTCTATCTTGTCAC.............................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTTGTCCTTAACATATGTATATAC................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTGCGCTTAGATTCGTGTGGTGAACGCCT............................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................TGAACGCCTTCCGGCAAGGTCTTGA............... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GTCTTGATGCCCGTTACGGGG. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TATGTGTTTGCATTTGATATT........................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TCCGGCAAGGTCTTGATGCC........... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TATTTTTCCTTATACTGTCGTT............................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TACTCGACTTGCGCTTAGCTT............................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCTTTTCTTTCTAATCGACTTGCGC...................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TATATGTGTTTGCATTTGATA............................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTCCTTATACTGTCGTTTCTGTCT........................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTCTATCTTGTCACTGTTCTTGGTGT.................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTCCGGCAAGGTCTTGATGCC........... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTCTACTCGACTTGCGCTTAGATTCGTG........................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTCCTTATACTGTCGTTTCTGTC......................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TTGTCACTGTTCTTGGTGTTG................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TACAAACATGGGCATATGTATATGTGTT........................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................ACTGTCGTTTCTGTCTATCTT................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GACTTGCGCTTGGATTCGTGT.......................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................ATACAAACATGGGCATATGTAA............................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGTGGTGAACGCCTTCCGGCAAGGTC................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGAAGTGTATTTTTCCTTATA....................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CTTGTCACTGTTCTTGGTGTT................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCCTCATACTGTCGTTTCTGTCTATC..................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TCTTTCTACTCGACTTGCGCT..................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TCTATCTTGTCACTGTTCTTG...................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGTTAGACATAAAAAAGTGTA................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTCCTTATACTGTCGTTTCTGTCTATC..................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTCTACTCGACTTGCGCTTAGATTCGTGT.......................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TCGACTTGCGCTTAGATTCGTGTGGTG...................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCAGTTAGACATAAAAAAGTGTAT.................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGCGCTTAGATTCGTGTGGTG...................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGGCATATGTATATGTGTTTGCATT.................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTTGCATTTGATATTTTCAGTTAGACA............................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TTAACATATGTATATACAAACATGGGC....................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TACAAACATGGGCATATGTATATGTGT......................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................TTCTTTCTACTCGACTTGCGC...................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTTTGTCCTTAACATATGTA...................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTGTCTATCTTGTCACTGTTC......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AGGTCTTGATGCCCGTTACGG... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........ATGTTCTATTCTTTTTACCTT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTTACCTTTGTTTTTTGTCCT................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGTGAACGCCTTCCGGCAAGGTCT.................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CTTTGTTTTTTGTCCTTAACA............................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CATGGGCATATGTATATGTG.......................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TATCTTGTCACTGTTCTTGGTT................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTGAACGCCTTCCGGCAAGG..................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCTTTTCTTTCTACTCGACTTGCGC...................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTTTTCTTTCTACTCGACTTGCGC...................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TAGATTCGTGTGGTGAACGT................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TCTTTCTACTCGACTTGCGCTTAGATTC.............................................. 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCACTGTTCTTGGTGTTGTTCTTTTCT....................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GAATTGCGCTTAGATTCGTGT.......................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTAGATTCGTGTGGTGAACGC................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TCGTGTGGTGAACGCCTTCCGGCAA....................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTTTTTTGTCCTTAACATATGTATA.................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TACAAACATGGGCATATGTATCC............................................................................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TCGACTTGCGCTTAGATTCGTGTGGTGA..................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTATATACAAACATGTGCATATGT................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCTTTTCTTTCTACTCGCCTTGCGC...................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TTCTTTCTACTCGACTTGCG....................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCTTGATGCCCGTTACGGGGA 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTCTATCTTGTCACTGTTCT........................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TCGACTTGCGCTTGGATTCG............................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCTTGATGCCCGTTGCGGGGA 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TTGTCACTGTTCTTGGTGTTGTTCTT........................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................TTCCTTATACTGTCGTTTCTG........................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACGCCTTCCGGCAAGGTCTTG................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TGCATTTGATATTTTCAGTTAGACA............................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTATATACAAACATGGGCATATGTA................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTCTTTTCTTTCTACTCGACT........................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................AACATGGGCATATGTATATGTGTTTGC..................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TTTGTTTTTTGTCCTTAACATATGTA...................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TATACTGTCGTTTCTGTCTATCTTG.................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TGTGTTTGCATTTGATATTTT......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGACATAAAAAAGTGTATTTTTCCTTA......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CTTTCTACTCGACTTGCGCTT.................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CTTGTCACTGTTCTTGGTGTTGTTC............................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTCCTTATACTGTCGTTTCT............................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCTTTTCTTTCTACTCGACTTGCGCT..................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................TATGTATATACAAACATGGGCATA.................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TATCTTGTCACTGTTCTTGGTGTTG................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TCTTTTTACCTTTGTTTTTTGTCCTT................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGGATTCGTGTGGTGAACGCC................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CCGGCAGGGTCTTGATGCC........... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CAAACATGGGCATATGTATATGTGTT........................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTGGATTCGTGTGGTGAGCGC................................. 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGATTCGTGTGGTGAACGC................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTCTTTTCTTTCTACTCGACTTGCGC...................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTGCGCTTAGATTCGTGTGGTGAACGCCT............................... 30 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............ATTCTTTTTCTCTTTGTTTTT....................................................................................................................................................................................................................... 21 2 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGGATTCGTGTGGTGGGCGC................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................AACGCCTTCCGGCCCCGTC................... 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................TGATCATGGCGTTGTTCTTT.......................................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGGTTGCATTTGATAGTTCC........................................................................................................................................................ 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GATCATGGCGTTGTTCTTT.......................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAAAAGAGTGAATTTTTC............................................................................................................................. 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCTTGGTGTTGTTCTTTAA........................................................................ 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTTTACCTTTGTGCGTTGTC................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GACACTAATACAAGATAAGAAAAATGGAAACAAAAAACAGGAATTGTATACATATATGTTTGTACCCGTATACATATACACAAACGTAAACTATAAAAGTCAATCTGTATTTTTTCACATAAAAAGGAATATGACAGCAAAGACAGATAGAACAGTGACAAGAACCACAACAAGAAAAGAAAGATGAGCTGAACGCGAATCTAAGCACACCACTTGCGGAAGGCCGTTCCAGAACTACGGGCAATGCCCCT
*******************************************************************************************************************************.....((......((((.......((((((((...((((.....)))).)))))))).....))))...))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M047
female body
 SRR060672
9x160_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060674
9x140_ovaries_total
 M028
head
 SRR060659
Argentina_testes_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 M027
male body		 M061
embryo
 SRR060686
Argx9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060670
9_testes_total
............................................................................................................................AGGAATATGACAGCAAAGACA.......................................................................................................... 21 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CACCACTTGCGGGAGGCCGTTC...................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AACTATAAAAGTCAATCTGTA.............................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TATGACAGCAAAGACAGATAG..................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCGGAAGGCCGCTCCAGGGC................ 21 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CAGGAATTGTGTACATATAT.................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACGCGAATCTAAGCACACCGC...................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CATAAAAAGGGATATGACAGC................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCGGAAGGCCGTTCCAGG.................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCGAATCTAAGCACACCACT..................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCGGAAGGCCGTTCCAGGACTA.............. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CACCACTTGCGGGAGGCCGTT....................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTGCGGAAGGCCGTTCCAGGAC................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CCGTATACATATACACAAACGTAA.................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GGAAGGCCGTTCCAGAACTA.............. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCGAATCTAAGCGCACCACT..................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAGGAATGTGACAGCAGAGAC........................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TATATGTTTGTACCCGTATA................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CTTGCGGGAGGCCGTTCCAGG.................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCGGAAGGCCGTTCCAGAACT............... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAAAGGAATATGACAGCAAA.............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GGAAGGCCGTTCCAGAACTAC............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TGAACGCGAATCTAAGCACA.......................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCGAATCTAAGCACACCGCT..................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GAAAGGTGAGCTGAACGCGAA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCGGAAGGCCGTTCCAGAAC................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................TGTTTGTACCCGTATACAT................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACGCGAATCTAAGCACACCAC...................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AGTGACAAGAACCACAACAAG............................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCGGAAGGCCGTTCCAGGGC................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................GGAAACAAAAAACAGGAATT.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GCTGAACGCGAATCTAAGCAC........................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GGAAGGCCGTTCCAGGGCTA.............. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CACAACAAGAAAAGAAAGA................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GAGGACCACAACAAGAAAAG........................................................................ 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ATAAGAAGGAATAAGACAG.................................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTTTTCGAATAAAAAGGAA.......................................................................................................................... 19 2 20 0.25 5 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0
........................................GAATTGTGTACATATGTGTTT.............................................................................................................................................................................................. 21 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AATATGACAGCGGAGGCAGAT....................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAGATTTGCTGAACGCG...................................................... 18 2 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGCAGAACTCGGGGCAATG..... 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................CAGAACCAGACAAGAAAGAT.................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................TGCGCAAGGGCTTTCCAG................... 18 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................ATGTTGGGACCGGTATACA................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................AAGGAATATCCCAGGAAA.............................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................CAAGAACCACGACAAGAAG.......................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GGACGGCCGTTCCGGAAAT............... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................ACACGAACCACAACAAGAG........................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13052:1723525-1723775 - dvi_22087 CTGTGATTATGTTCTATTCTTTTTACCTTTGT-----------------TTTTTGTCC----------TTAACATATGT------ATATACAAAC-ATGGGCA---------------------TATG----TA----TATGTGTTTGCATT---------------------------------------------TGAT---------ATTTTCAGTTAGACATAAAAA----------------AG-TG-TATTTTTC-----C----TTA---TACT---GTCG-TTTCTGTCTAT-CTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTCT--------------ACTC---------------------GACTTGCG----CTTAGATTCGTGTGGTGAACGCCTTCCGGCAAGGTCTTGATGCCCGTTACGGGGA
droMoj3 scaffold_6498:810382-810652 - CTGTGTTTATGTTAAATTTGTGGTTTCTGTTT-----------------GATTAGTTC-----------------------------T--CTTATAATGAATAA-----ATATACATACTAATGTATG----TT-----ATGTGT-----------------------------------------TTTGCATA---TGAT----------TTTTTCAGTTGAATGACAAATAAAAAATAAACAAAATAGTAGTATTCTTT-----C----TTA---TACT---GTCGTTTCCTGTCTAT-CTTGTCACTGTTCTT-------GGTGT----TGTTATTTTCTTTCT--------------ACTT---------------------GACTTGTG----CTTAGATACGTGTGGTGAACGCCTTCCGGCAAGGTCTTGACGCCCGTTACGGTGA
droGri2 scaffold_14592:99978-100134 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TATT---GTTG-TCTGTCTTTAT-CTTGTCACTGTTCTC-------GGTGT----TGTTCTTTTCTTCTTTTCATTTCTCT---ACTA--CAAACGCGTAACGTAACGTAACGTGTGACGTAATAGATACGAGTGGTGAATGCGTTTCGGCAAGGCCTCGATGCCCGTTACGGTGA
droWil2 scf2_1100000004943:2018020-2018212 + TGT-------------------------------------TT-----------------GCATTTAATTTT--------------TGA--CTGATTAAAAACCTGTACG-----TGTACC--TG------------------------------------------------------------------TATGT----------------------------------------------------ACCTG-------TACTTCCC----TCA---AATT---GTTG-TTTCTGTCTCT-TTTGTCACTGTTATC-------GGTGT----TGTTCTTTTCTTTTT-------------TGCTCGAC------------------GACTTGCG----CTTAGATTCGCGTGGTGAACGCCTTCCGGCAAGGTCTCGACGCCCGTTATGGTGA
dp5 Unknown_group_1:25483-25742 - TTTAT--TATGTTT-------------GTTAT-----------------TTTTTGTTA----------------TGTACATAT--GTA----------------------------TACT--TGTATG----TT----AGTATGTGCATATCTATGTACGCAAACAAAAT---TTATG-----CA-TTTGCATT---CGATTCT--TTTCATTTTTAGTCTGACTGATCGA----------------AACTG-------TT-----C----TTA---TACT---GTTG-TTTCCGTCTCT-CTTGTCACTGTTATT-------GGTGT----TGTTCTTTTCTTTTT--------------AT-T---------------------AATTTGTA----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTTGACGCCCGTTACGGTGA
droPer2 scaffold_42:146342-146601 - TTTAT--TATGTTT-------------GTTAT-----------------TTTTTGTTA----------------TGTACATAT--GTA----------------------------TACT--TGTATG----TT----AGTATGTGCATATCTATGTACGCAAACAAAAT---TTATG-----CA-TTTGCATT---CGATTCT--TTTCATTTTTAGTCTGACTGATCGA----------------AACTG-------TT-----C----TTA---TACT---GTTG-TTTCCGTCTCT-CTTGTCACTGTTATT-------GGTGT----TGTTCTTTTCTTTTT--------------AT-T---------------------AATTTGTA----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTTGACGCCCGTTACGGTGA
droAna3 scaffold_13045:1179753-1179948 + CTTTA--------------------------------TATTT-----------------GTATC----------TAAGC------AAA--CTTAATAAGAATA---------------------TAT------------ATGTGTGCTT----------------------------------------GCATTTAAC-GG----------TGTAAAGCCAGATTGAAT--------------------TCA-------TT-----C----ATA---CATT---GTCG-TAATTGTCCCT-AATGTTATTGTTATT-------GGTTT----T------TTCTT--------------------T---------------------ATTTTGTG----CTTAGATTCGGGTGGTGAACGCATTCCGCCAAGGTCTGGATGCCCGCTACGGTGA
droBip1 scf7180000395410:35167-35331 + ATA----------------------------------------------------------------------------------------------AGAA---------------------------------------TATGTGTATTAT--------------------------------------TATTTAAC-GG----------TGAGAAGCCATACTGAATTA----------------A-----------TC-----T----ATG---TACT---GTCG-TCATTGTCCCT-AATGTAA------TT-------GGTAT----TGTTGTTTTCTT--------------------T---------------------AATTTTTG----CTTAGATTCGGGTGGTGAACGCGTTTCGCCAAGGTCTTGATGCCCGCTATGGTGA
droKik1 scf7180000299562:21520-21791 - TTAA---------------------------------------------------------------CT-----TAAACATGTGTGTGTA------------------------------------------TT----C--------------------TTAAACAAAATTGTTTGTGTATTTAATATTGCATT---AAATATTATTATTATTAAAAGCCTGACTCACTAA----------TCAAAAAGCTA-------TTCTC--CTATCATATATTACT---GTAG-TTTGTCTAGTT-TTTGTCACTGTTTTCTATTTTTTGTGTCTCTCGTTCTCCTCTCTCTCTCTTTTCTTTTTTATTTAAT-----T------------TTTTTGTG---AATTAGATTCGTGTGGTGAACGCTTTTCGCCAAGGTCTAGATGCCCGTTGTGGCGA
droFic1 scf7180000454042:102475-102704 + TTGTT--A------------------------CCTTAAGTTTTAATTTATTTTAGTTATGC----------GCTTAAAC------ATA--CAGATTAAGAATG---------------------TATA----TT----TATGTGTGCATTCC---------------------------------------------C------------------GGCTTGAGTGATTAA----------------AGCTG-------TTCTT-------------TACTGTTGTTG-TTTCTGTCTCTTTTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTCTT--------------ACCT---------------------AATGTACG----CTTAGATTCGTGTGGTGAATGCCTTCCGGCAAGGTCTCGACGCCCGTTACGGTGA
droEle1 scf7180000491238:1033408-1033634 + TTATT--T--------------------------------CT-----------------GTATTTTATTTGGTTTATGC------ATA--CATAATGAGAATG---------------------TATG----TTAATACATATGTGCATACC---------------------------------------------TGAC----------TCTCTAGCTTGACTGATTAC----------------AGCTG-------TTCTT--C----TTA---TACT---GTTA-TTTCTGTCTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------AATGTGTG----CTTAGATTCGAGTGGTGAACGCATTCCGGCAAGGTCTCGACGCCCGTTACGGTGA
droRho1 scf7180000780208:17925-18155 - CTCTT--------------------------------ATTTT-----------------GTATTAGATTTGGTTTATACATAT--GTA--CATAATGGGAATG---------------------AACG----TTAATACATATGTACATGCC---------------------------------------------TTAC----------TCTTTGGCTTGACTGATTTC----------------AGATT------TTT-----T----TTA---TACT---GTTG-TTCCTGTCTTT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------ACTGTGCG----ATTAGATTCGAGTGGTGAACGCATTCCGGCAAGGTCTCGACGCCCGTTACGGTGA
droBia1 scf7180000301495:119836-120061 - TGTTC--CT----------------------------TTTTT-----------------GTATTTTGTTTAGTTTATAC------ATA--CATAACAAGAATG---------------------TATG----TT----CATATGTGCATAAT---------------------------------------------CGGC----------TGTTTAGCTTGACTGATTAA----------------ATATT-------TTCAT--C-----TA---TACT---GTTG-TTTCTGTCACT-TTTGTCACTGTTTTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------AATGTGCG----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTGGACGCCCGTTACGGTGA
droTak1 scf7180000415786:53503-53723 - TTTT------------------------------------TT-----------------GCATTCCATTTAGTTTATAC------ATT--CATAACAAGAATG---------------------TATG----TT----AATATGTGCATAAT---------------------------------------------CGGC----------TCTTTAGCTTGACTGATAAA----------------GTATG-------TTCTT--C----TTA---TATT---GTTG-TTTCTGTCTCC-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------AATGTGCG----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTCGACGCCCGTTATGGTGA
droEug1 scf7180000408984:817242-817460 + TTTTT--T------------------------CTCTTATTTT-----------------GTATTTTATTTGGTTTACAT------GTA--CAAAATAAGAATG---------------------TTAT----TT----AATATGTGTGTACC---------------------------------------------TAAC-------------------TGGCTGATATA----------------GAAAA-------TT-----G----TTA---TACT---GTTG-TTTCTGACTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------TTCC---------------------TATGTGCG----CTAAGATTCGTGTGGTGAACGCTTTCCGGCAAGGTCTCGACGCTCGATATGGTGA
dm3 chr4:350005-350223 - TT---------------------------------------T-----------------GTATTTAATTTGAACTAGAA------ATATACATAA-AAGAAAG---------------------TATG----TT----CATATATGTATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAATGATTAA----------------AGATG-------TTCTT--C----TTA---TACT---ATTG-TTTATGTCCCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CTTAGATACGAGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGTTACGGTGA
droSim2 4:283809-284027 - dsi_27110 TT---------------------------------------T-----------------GTATTTAGTTTGAACTACAC------ATATACATAA-ATGAAAG---------------------TATG----TT----CAAATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGCTTGACTGATTAA----------------AGATG-------TTCTT--C----TTA---TACT---ATTG-TTTATGTCCCT-TTTGTCACTGTTCTC-------GGTTT----TGTTCTTTTCTTTTT--------------GCTA---------------------AATATACG----CTTAGATACGAGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGTTACGGTGA
droSec2 scaffold_30:87414-87631 - TT---------------------------------------T-----------------GTATTTAGTTTGAACTACAC------ATAAACATAA-ATGAAAG---------------------TGTG----TT----CAAATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGCTTGACTGATTAA----------------AGATG-------TTCTT--C----TTA---TACT---A-TG-TTTATGTCCCT-TTTGTCACTGTTCTC-------GGTTT----TGTTCTTTTCTTTTT--------------GCTA---------------------AATATACG----CTTAGATACGAGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGTTACGGTGA
droYak3 4:379894-380112 - CTT--------------------------------------T-----------------GTATTTCATTTCAACTATAC------ATATACTTAA-ATGAACG---------------------TATG----TT----CATATGTACACAAT---------------------------------------------TGGA----------TATTTAGCTTGACTGATTAA----------------AAAAT-------TTCTT--C-----TA---TACT---GTTT-TTAATGTCTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CTTAGATTCGTGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGGTACGGGGA
droEre2 scaffold_4512:955978-956197 + CTT--------------------------------------T-----------------GTATTTCATTTAAACTATAC------ATATACATA--AAGAACG---------------------TATGTATGTT----CATATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGCTTGACTGATAAA----------------ATTTG-------TT-----C----TTA---TACT---GTTT-TTTATGTCTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CGTAGATTCGTGTGGTAAACGCATTCCGACAGGGTCTGGACGCCCGTTATGGTGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTGTGATTATGTTCTATTCTTTTTACCTTTGT-----------------TTTTTGTCC----------TTAACATATGT------ATATACAAAC-ATGGGCA---------------------TATG----TA----TATGTGTTTGCATT---------------------------------------------TGAT---------ATTTTCAGTTAGACATAAAAA----------------AG-TG-TATTTTTC-----C----TTA---TACT---GTCG-TTTCTGTCTAT-CTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTCT--------------ACTC---------------------GACTTGCG----CTTAGATTCGTGTGGTGAACGCCTTCCGGCAAGGTCTTGATGCCCGTTACGGGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................GACTTGCG----CTTAGATTCGTGT..........................................2114.004001000000200000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TCAGTTAGACATAAAAA----------------AG-TG-TATTTT..................................................................................................................................................................................................2714.004000000000000000200000000101000000000000000000000000000000000000
......................................................................................................................................................................................................................TCAGTTAGACATAAAAA----------------AG-TG-TATTT...................................................................................................................................................................................................2613.003000000000000000010000000000200000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACGCCTTCCGGCAAGGT....................2112.002000000000000000010100000000000000000000000000000000000000000000
..........................................................................................................................................TATGTGTTTGCATT---------------------------------------------TGAT---------ATTTTCAGT..........................................................................................................................................................................................................................................2712.002000000000000000000000000002000000000000000000000000000000000000
......................................................................................TATACAAAC-ATGGGCA---------------------TATG----TA----TATGT......................................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000100100000000000000000000000000000000
.....................................................................................................................................................................................................................TTCAGTTAGACATAAAAA----------------AG-TG-TATTT...................................................................................................................................................................................................2712.002000000000000000000000000001100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTTGCG----CTTAGATTCGTGTGG........................................2112.002000001000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCG----CTTAGATTCGTGTGGTGA.....................................2112.002000000000000000000000100100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTCTGTCTAT-CTTGTCACTGTTCTT-------GGT...............................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000002
.................................................................................................................................................................................................................................................................................................................................................TTTTCTTTCT--------------ACTC---------------------GACTTGCG----CTT....................................................2512.002000000200000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GATTCGTGTGGTGAACGCCTT..............................2112.002000000000000000000000010001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TATTTTTC-----C----TTA---TACT---GTCG-T...................................................................................................................................................................2112.002000000000000000000000000101000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTGTGGTGAACGCCTTCCGGCAAGG.....................2812.002000000000020000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCTTTCT--------------ACTC---------------------GACTTGCG----CTTAGATT...............................................2712.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TC-----C----TTA---TACT---GTCG-TTTCTGT.............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTTCTT-------GGTGT----TGTTCTTTTC...............................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
............TCTATTCTTTTTACCTTTGT-----------------TTTTTGTCC----------.................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TTTCT--------------ACTC---------------------GACTTGCG----CTTA...................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCGTGTGGTGAACGCCT...............................2111.001000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTCTTGATGCCCGTTACG....2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CT--------------ACTC---------------------GACTTGCG----CTTAGATT...............................................2211.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTTCTTTTCTTTCT--------------ACTC---------------------GAC................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GTCTAT-CTTGTCACTGTTCTT-------GGTGT----.........................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTGTCACTGTTCTT-------GGTGT----TGTTCTTT.................................................................................................................2711.001000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG----CTTAGATTCGTGTGGTGAACGCCTT..............................2711.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TACT---GTCG-TTTCTGTCTAT-CTTGTCAC................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
...................................................TTTGTCC----------TTAACATATGT------ATATAC..........................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTGCG----CTTAGATTCGTGTGGTGAACGCCT...............................2911.001000000000000000000000000000000000000000000000100000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGCCTTCCGGCAAGGTCTTGA...............2511.001000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGATGCCCGTTACGGGG.2111.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................TATGTGTTTGCATT---------------------------------------------TGAT---------ATT................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCAAGGTCTTGATGCC...........2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TATTTTTC-----C----TTA---TACT---GTCG-TT..................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TA----TATGTGTTTGCATT---------------------------------------------TGAT---------A..................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTC-----C----TTA---TACT---GTCG-TTTCTGTCT...........................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TGTCTAT-CTTGTCACTGTTCTT-------GGTGT----.........................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGCAAGGTCTTGATGCC...........2111.001000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTCT--------------ACTC---------------------GACTTGCG----CTTAGATTCGTG...........................................2811.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTC-----C----TTA---TACT---GTCG-TTTCTGTC............................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTGTCACTGTTCTT-------GGTGT----TG.......................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
........................................................................................TACAAAC-ATGGGCA---------------------TATG----TA----TATGTGTT...................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ACT---GTCG-TTTCTGTCTAT-CTT.....................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................ATACAAAC-ATGGGCA---------------------TATG----TA----A..........................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAACGCCTTCCGGCAAGGTC...................2611.001000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CTTGTCACTGTTCTT-------GGTGT----T........................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................TCTTTCT--------------ACTC---------------------GACTTGCG----CT.....................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCTAT-CTTGTCACTGTTCTT-------G.................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TTCAGTTAGACATAAAAA----------------AG-TG-TA......................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTC-----C----TTA---TACT---GTCG-TTTCTGTCTAT-C.......................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTCT--------------ACTC---------------------GACTTGCG----CTTAGATTCGTGT..........................................2911.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TC---------------------GACTTGCG----CTTAGATTCGTGTGGTG......................................2711.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................TTCAGTTAGACATAAAAA----------------AG-TG-TAT.....................................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGCG----CTTAGATTCGTGTGGTG......................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................TGGGCA---------------------TATG----TA----TATGTGTTTGCATT---------------------------------------------................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................TTTGCATT---------------------------------------------TGAT---------ATTTTCAGTTAGACA....................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
....................................................................TTAACATATGT------ATATACAAAC-ATGGGC...............................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................TACAAAC-ATGGGCA---------------------TATG----TA----TATGTGT....................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TTCTTTCT--------------ACTC---------------------GACTTGCG----C......................................................2111.001000000000000000000000000000000000100000000000000000000000000000
..................................................TTTTGTCC----------TTAACATATGT------A...............................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CTGTCTAT-CTTGTCACTGTTC...........................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCTTGATGCCCGTTACGG...2111.001000000000000000000000010000000000000000000000000000000000000000
........ATGTTCTATTCTTTTTACCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.....................TTTACCTTTGT-----------------TTTTTGTCC----------T................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAACGCCTTCCGGCAAGGTCT..................2511.001000000000000000000000000001000000000000000000000000000000000000
..........................CTTTGT-----------------TTTTTGTCC----------TTAACA...........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................C-ATGGGCA---------------------TATG----TA----TATGTG.....................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TAT-CTTGTCACTGTTCTT-------GGTT..............................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACGCCTTCCGGCAAGG.....................2011.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCTTTTCTTTCT--------------ACTC---------------------GACTTGCG----C......................................................2511.001000000000000000000000000000000000000000000000000000000000000001
................................................................................................................................................................................................................................................................................................................................................CTTTTCTTTCT--------------ACTC---------------------GACTTGCG----C......................................................2411.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTCGTGTGGTGAACGT.................................2011.001000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCTTTCT--------------ACTC---------------------GACTTGCG----CTTAGATTC..............................................2811.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................TCACTGTTCTT-------GGTGT----TGTTCTTTTCT..............................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTAGATTCGTGTGGTGAACGC.................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGTGGTGAACGCCTTCCGGCAA.......................2511.001000000000000000000000001000000000000000000000000000000000000000
..............................GT-----------------TTTTTGTCC----------TTAACATATGT------ATA.............................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................TACAAAC-ATGGGCA---------------------TATG----TA----TCC........................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TC---------------------GACTTGCG----CTTAGATTCGTGTGGTGA.....................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TTCTTTCT--------------ACTC---------------------GACTTGCG----.......................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATGCCCGTTACGGGGA2111.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TGTCTAT-CTTGTCACTGTTCT..........................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTGTCACTGTTCTT-------GGTGT----TGTTCTT..................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTC-----C----TTA---TACT---GTCG-TTTCTG..............................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCTTCCGGCAAGGTCTTG................2111.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................TGCATT---------------------------------------------TGAT---------ATTTTCAGTTAGACA....................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
............................................................................TGT------ATATACAAAC-ATGGGCA---------------------TATG----TA----...........................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTCTTTTCTTTCT--------------ACTC---------------------GACT...............................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................AAC-ATGGGCA---------------------TATG----TA----TATGTGTTTGC................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
...........................TTTGT-----------------TTTTTGTCC----------TTAACATATGT------A...............................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................TA---TACT---GTCG-TTTCTGTCTAT-CTTG....................................................................................................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TGTGTTTGCATT---------------------------------------------TGAT---------ATTTT..............................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................AGACATAAAAA----------------AG-TG-TATTTTTC-----C----TTA---................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CTTTCT--------------ACTC---------------------GACTTGCG----CTT....................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CTTGTCACTGTTCTT-------GGTGT----TGTTC....................................................................................................................2511.001000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTC-----C----TTA---TACT---GTCG-TTTCT...............................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCTTTTCTTTCT--------------ACTC---------------------GACTTGCG----CT.....................................................2611.001000000000000000000000000000000000000001000000000000000000000000
..........................................................................TATGT------ATATACAAAC-ATGGGCA---------------------TA.......................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TAT-CTTGTCACTGTTCTT-------GGTGT----TG.......................................................................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
.................TCTTTTTACCTTTGT-----------------TTTTTGTCC----------TT...............................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
..........................................................................................CAAAC-ATGGGCA---------------------TATG----TA----TATGTGTT...................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTCTTTTCTTTCT--------------ACTC---------------------GACTTGCG----C......................................................2611.001000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTTGCG----CTTAGATTCGTGTGGTGAACGCCT...............................3011.001000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................TCTT-------GGTGT----TGTTCTTTAA...............................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
droMoj3
CTGTGTTTATGTTAAATTTGTGGTTTCTGTTT-----------------GATTAGTTC-----------------------------T--CTTATAATGAATAA-----ATATACATACTAATGTATG----TT-----ATGTGT-----------------------------------------TTTGCATA---TGAT----------TTTTTCAGTTGAATGACAAATAAAAAATAAACAAAATAGTAGTATTCTTT-----C----TTA---TACT---GTCGTTTCCTGTCTAT-CTTGTCACTGTTCTT-------GGTGT----TGTTATTTTCTTTCT--------------ACTT---------------------GACTTGTG----CTTAGATACGTGTGGTGAACGCCTTCCGGCAAGGTCTTGACGCCCGTTACGGTGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................TCTGTTT-----------------GATTAGTTC-----------------------------T--CTTA.......................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGACGCCCGTTACGGTG.1911.001100000
......................................................................................................................CTAATGTATG----TT-----ATGTGT-----------------------------------------TTTGC......................................................................................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................................................................................................................C----TTA---TACT---GTCGTTTCCTGTCTAT-CTT.....................................................................................................................................................2711.001000001
.......................................................................................................................................................................................................AT----------TTTTTCAGTTGAATGACAAA..............................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................TT---------------------GACTTGTG----CTTAGATACGTGTGG........................................2511.001100000
.............AAATTTGTGGTTTCTGTTT-----------------GAT.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAACGCCTTCCGGCAAGGTC...................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................G----CTTAGATACGTGTGGTGAACGCCT...............................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTG----CTTAGATACGTGTGGTGAACGCCT...............................2711.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAACGCCTTCCGGCAAGGTCT..................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................TATTTTCTTTCT--------------ACTT---------------------GACC...............................................................2011.001000010
droGri2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TATT---GTTG-TCTGTCTTTAT-CTTGTCACTGTTCTC-------GGTGT----TGTTCTTTTCTTCTTTTCATTTCTCT---ACTA--CAAACGCGTAACGTAACGTAACGTGTGACGTAATAGATACGAGTGGTGAATGCGTTTCGGCAAGGCCTCGATGCCCGTTACGGTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TGT-------------------------------------TT-----------------GCATTTAATTTT--------------TGA--CTGATTAAAAACCTGTACG-----TGTACC--TG------------------------------------------------------------------TATGT----------------------------------------------------ACCTG-------TACTTCCC----TCA---AATT---GTTG-TTTCTGTCTCT-TTTGTCACTGTTATC-------GGTGT----TGTTCTTTTCTTTTT-------------TGCTCGAC------------------GACTTGCG----CTTAGATTCGCGTGGTGAACGCCTTCCGGCAAGGTCTCGACGCCCGTTATGGTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................TGTACG-----TGTACC--TG------------------------------------------------------------------TATGT----------------------------------------------------ACC...........................................................................................................................................................................................................2212.00220000
................................................................TAATTTT--------------TGA--CTGATTAAAAACCTG............................................................................................................................................................................................................................................................................................................................................................2511.00101000
......................................................................................................................................................................................................................................................................................................GTCTCT-TTTGTCACTGTTATC-------GGTGT----.........................................................................................................................2611.00100100
.........................................................................................................................................................................................................................................................CTG-------TACTTCCC----TCA---AATT---GTTG-TTTCT...............................................................................................................................................................2711.00101000
..............................................................................................................................................................................................................................................................................................................................................TTCTTTTCTTTTT-------------TGCTCGAC------------------GACT...............................................................2511.00100010
.............................................................................................................................................................................................................................................................................................TTG-TTTCTGTCTCT-TTTGTCACT...............................................................................................................................................2311.00101000
...............................................................................................................................................................................................................................................................................................................................................TCTTTTCTTTTT-------------TGCTCGAC------------------GACTTG.............................................................2611.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................GACTTGCG----CTTAGATTCGCGTG.........................................2211.00100010
dp5
TTTAT--TATGTTT-------------GTTAT-----------------TTTTTGTTA----------------TGTACATAT--GTA----------------------------TACT--TGTATG----TT----AGTATGTGCATATCTATGTACGCAAACAAAAT---TTATG-----CA-TTTGCATT---CGATTCT--TTTCATTTTTAGTCTGACTGATCGA----------------AACTG-------TT-----C----TTA---TACT---GTTG-TTTCCGTCTCT-CTTGTCACTGTTATT-------GGTGT----TGTTCTTTTCTTTTT--------------AT-T---------------------AATTTGTA----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTTGACGCCCGTTACGGTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................TTTCCGTCTCT-CTTGTCACTG..............................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................TTTCATTTTTAGTCTGACTGA..................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................TTA---TACT---GTTG-TTTCCGTCT...........................................................................................................................................................2011.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTGTA----CTTAGATTCGTGTGGT.......................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCGGCAAGGTCTTGACGC............2311.0010010000000
....................................................................................................................................................................................................................TTTTAGTCTGACTGATCGA----------------AA............................................................................................................................................................................................................2111.0010100000000
droPer2
TTTAT--TATGTTT-------------GTTAT-----------------TTTTTGTTA----------------TGTACATAT--GTA----------------------------TACT--TGTATG----TT----AGTATGTGCATATCTATGTACGCAAACAAAAT---TTATG-----CA-TTTGCATT---CGATTCT--TTTCATTTTTAGTCTGACTGATCGA----------------AACTG-------TT-----C----TTA---TACT---GTTG-TTTCCGTCTCT-CTTGTCACTGTTATT-------GGTGT----TGTTCTTTTCTTTTT--------------AT-T---------------------AATTTGTA----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTTGACGCCCGTTACGGTGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................T--TTTCATTTTTAGTCTGACT....................................................................................................................................................................................................................................2012.002200000
......................................................................................................................................................................................................................................................................................ACT---GTTG-TTTCCGTCTCT-CTTGTCACT...............................................................................................................................................2711.001100000
....................................................................................................................................................................................................................TTTTAGTCTGACTGATCGA----------------AACT..........................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................................TTTTAGTCTGACTGATCGA----------------..............................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................TTTCATTTTTAGTCTGACT....................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTGTA----CTTAGATTCGTGTGGTGAACG..................................2611.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCATTCCGGCAAGGT....................1911.001000001
...............................................................................................................................................................................................ATT---CGATTCT--TTTCATTTTTAGTCTGACT....................................................................................................................................................................................................................................2911.001100000
droAna3
CTTTA--------------------------------TATTT-----------------GTATC----------TAAGC------AAA--CTTAATAAGAATA---------------------TAT------------ATGTGTGCTT----------------------------------------GCATTTAAC-GG----------TGTAAAGCCAGATTGAAT--------------------TCA-------TT-----C----ATA---CATT---GTCG-TAATTGTCCCT-AATGTTATTGTTATT-------GGTTT----T------TTCTT--------------------T---------------------ATTTTGTG----CTTAGATTCGGGTGGTGAACGCATTCCGCCAAGGTCTGGATGCCCGCTACGGTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATA----------------------------------------------------------------------------------------------AGAA---------------------------------------TATGTGTATTAT--------------------------------------TATTTAAC-GG----------TGAGAAGCCATACTGAATTA----------------A-----------TC-----T----ATG---TACT---GTCG-TCATTGTCCCT-AATGTAA------TT-------GGTAT----TGTTGTTTTCTT--------------------T---------------------AATTTTTG----CTTAGATTCGGGTGGTGAACGCGTTTCGCCAAGGTCTTGATGCCCGCTATGGTGASizeHit CountTotal NormTotal
No Reads
droKik1
TTAA---------------------------------------------------------------CT-----TAAACATGTGTGTGTA------------------------------------------TT----C--------------------TTAAACAAAATTGTTTGTGTATTTAATATTGCATT---AAATATTATTATTATTAAAAGCCTGACTCACTAA----------TCAAAAAGCTA-------TTCTC--CTATCATATATTACT---GTAG-TTTGTCTAGTT-TTTGTCACTGTTTTCTATTTTTTGTGTCTCTCGTTCTCCTCTCTCTCTCTTTTCTTTTTTATTTAAT-----T------------TTTTTGTG---AATTAGATTCGTGTGGTGAACGCTTTTCGCCAAGGTCTAGATGCCCGTTGTGGCGASizeHit CountTotal NormTotal
No Reads
droFic1
TTGTT--A------------------------CCTTAAGTTTTAATTTATTTTAGTTATGC----------GCTTAAAC------ATA--CAGATTAAGAATG---------------------TATA----TT----TATGTGTGCATTCC---------------------------------------------C------------------GGCTTGAGTGATTAA----------------AGCTG-------TTCTT-------------TACTGTTGTTG-TTTCTGTCTCTTTTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTCTT--------------ACCT---------------------AATGTACG----CTTAGATTCGTGTGGTGAATGCCTTCCGGCAAGGTCTCGACGCCCGTTACGGTGASizeHit CountTotal NormTotal
No Reads
droEle1
TTATT--T--------------------------------CT-----------------GTATTTTATTTGGTTTATGC------ATA--CATAATGAGAATG---------------------TATG----TTAATACATATGTGCATACC---------------------------------------------TGAC----------TCTCTAGCTTGACTGATTAC----------------AGCTG-------TTCTT--C----TTA---TACT---GTTA-TTTCTGTCTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------AATGTGTG----CTTAGATTCGAGTGGTGAACGCATTCCGGCAAGGTCTCGACGCCCGTTACGGTGASizeHit CountTotal NormTotal
No Reads
droRho1
CTCTT--------------------------------ATTTT-----------------GTATTAGATTTGGTTTATACATAT--GTA--CATAATGGGAATG---------------------AACG----TTAATACATATGTACATGCC---------------------------------------------TTAC----------TCTTTGGCTTGACTGATTTC----------------AGATT------TTT-----T----TTA---TACT---GTTG-TTCCTGTCTTT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------ACTGTGCG----ATTAGATTCGAGTGGTGAACGCATTCCGGCAAGGTCTCGACGCCCGTTACGGTGASizeHit CountTotal NormTotal
No Reads
droBia1
TGTTC--CT----------------------------TTTTT-----------------GTATTTTGTTTAGTTTATAC------ATA--CATAACAAGAATG---------------------TATG----TT----CATATGTGCATAAT---------------------------------------------CGGC----------TGTTTAGCTTGACTGATTAA----------------ATATT-------TTCAT--C-----TA---TACT---GTTG-TTTCTGTCACT-TTTGTCACTGTTTTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------AATGTGCG----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTGGACGCCCGTTACGGTGASizeHit CountTotal NormTotal
No Reads
droTak1
TTTT------------------------------------TT-----------------GCATTCCATTTAGTTTATAC------ATT--CATAACAAGAATG---------------------TATG----TT----AATATGTGCATAAT---------------------------------------------CGGC----------TCTTTAGCTTGACTGATAAA----------------GTATG-------TTCTT--C----TTA---TATT---GTTG-TTTCTGTCTCC-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACCT---------------------AATGTGCG----CTTAGATTCGTGTGGTGAACGCATTCCGGCAAGGTCTCGACGCCCGTTATGGTGASizeHit CountTotal NormTotal
No Reads
droEug1
TTTTT--T------------------------CTCTTATTTT-----------------GTATTTTATTTGGTTTACAT------GTA--CAAAATAAGAATG---------------------TTAT----TT----AATATGTGTGTACC---------------------------------------------TAAC-------------------TGGCTGATATA----------------GAAAA-------TT-----G----TTA---TACT---GTTG-TTTCTGACTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------TTCC---------------------TATGTGCG----CTAAGATTCGTGTGGTGAACGCTTTCCGGCAAGGTCTCGACGCTCGATATGGTGASizeHit CountTotal NormTotal
No Reads
dm3
TT---------------------------------------T-----------------GTATTTAATTTGAACTAGAA------ATATACATAA-AAGAAAG---------------------TATG----TT----CATATATGTATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAATGATTAA----------------AGATG-------TTCTT--C----TTA---TACT---ATTG-TTTATGTCCCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CTTAGATACGAGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGTTACGGTGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCCAGGGTCTGGACGCCCGT........24136.00360000000000000000000000000000000000000000001000000000200000010000000000000000000000000000000000000000000000000000000000000000000000000100010200000001011000000000000000000000000000000000000000100000030000000010120000500010300010000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000001400000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGCATTCCGCCAGGGTCTGGAC..............26119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000100000200030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................TATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAATGAT.................................................................................................................................................................................................................................27116.00160000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000100000000000000000010000301120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000
...........................................................................................................................................................................................................................................................................................................................................................................TA---------------------AATGTACG----CTTAGATACGAGTGG........................................25113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000003000000000000000000000000000000000000100000000000001000000000000100200000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100100000
....................................................................................................................................................TAAT---------------------------------------------TGGA----------TCTTTAGCTTGAATGAT.................................................................................................................................................................................................................................25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000010000000003000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................TACG----CTTAGATACGAGTGGTAAACGCA................................27110.00100000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000100000113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TACG----CTTAGATACGAGTGGTAAACGCAT...............................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000014200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TATGTCCCT-TTTGTCACTGTTCTT-------GGT...............................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
.....................................................................................................................................................................................................................................................................................................................TGTTCTT-------GGTGT----TGTTCTTTTCTTTT...........................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030200020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TA---------------------AATGTACG----CTTAGATACGAGTGGTA......................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000100000
..................................................................................................................................................TATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAATGA..................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000003010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TATGTCCCT-TTTGTCACTGTTCTT-------GG................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000002000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................GTTCTT-------GGTGT----TGTTCTTTTCTT.............................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCAGGGTCTGGACGCCCGTTACGG...2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000011200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................TAGATACGAGTGGTAAACGCA................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000100000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTGGTAAACGCATTCCGCCAGGG.....................2815.0050000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000001000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCCCT-TTTGTCACTGTTCTT-------GGTGT----.........................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGTATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAAT....................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................TCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CTTA...................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TA---TACT---ATTG-TTTATGTCCCT-TTTGT...................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTGGTAAACGCATTCCGCCAGGGTC...................3015.0050000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTGGTAAACGCATTCCGCCAGG......................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000
............................................................................................................................TATG----TT----CATATATGTATAAT---------------------------------------------TGGA----------..................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCTTTTT--------------ACTA---------------------AATGTACG----CTTAGA.................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CT.....................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TTTTCTTTTT--------------ACTA---------------------AATGTACG----CTTA...................................................2614.0040000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TT--------------ACTA---------------------AATGTACG----CTTAGATACGAG...........................................2614.0040000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..................................................................................................................................................................................................................................................................................................................................................................................................AATGTACG----CTTAGATACGAGTGGT.......................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAATGAT.................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGCATTCCGCCAGGGTCTGGACG.............2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000
......................................................................................................................................................................................................................TTAGCTTGAATGATTAA----------------AGATG-------TTC...............................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000010000000
............................................................................................................................................TATATGTATAAT---------------------------------------------TGGA----------TCTTTAGCT.........................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TTCTTTTT--------------ACTA---------------------AATGTACG----CTTAGA.................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TATGTATAAT---------------------------------------------TGGA----------TCTTTAGC..........................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACGAGTGGTAAACGCATTCCGC..........................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGCATTCCGCCAGGGTCTGGACGC............2814.0040000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
........................................................................................TACATAA-AAGAAAG---------------------TATG----TT----CATATATG...................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000011020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGTATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAATGA..................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAACGCATTCCGCCAGG......................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAACGCATTCCGCCAGGGTCTGGAC..............2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................T---------------------------------------------TGGA----------TCTTTAGCTTGAATGATTAA----------------A.............................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TTGAATGATTAA----------------AGATG-------TTCT..............................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTGTCACTGTTCTT-------GGTGT----TG.......................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TAGCTTGAATGATTAA----------------AGATG-------TTC...............................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCCGCCAGGGTCTGGACGCCCGT........2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TA---------------------AATGTACG----CTTAGATACGAGTGGT.......................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCCCGTTACGGTGA2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TAA----------------AGATG-------TTCTT--C----TTA---TACT---ATTG-TT..................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGTTCTT-------GGTGT----TGTTCTTTTCTT.............................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACGAGTGGTAAACGCA................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCATTCCGCCAGGGTCTGGACGCC...........2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GATG-------TTCTT--C----TTA---TACT---ATTG-....................................................................................................................................................................2113.0030000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGTACG----CTTAGATACGAGTGG........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................TTCTT-------GGTGT----TGTTCTTTTCTTTT...........................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................AT---------------------------------------------TGGA----------TCTTTAGCTTGAATG...................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................TTG-TTTATGTCCCT-TTTGTCACTGT.............................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................GTATAAT---------------------------------------------TGGA----------TCTTTAGCTT........................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000100000000000
............................................................................................................................................................................................................................TGAATGATTAA----------------AGATG-------TTCTT--C----TTA---................................................................................................................................................................................2513.0030000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGT----TGTTCTTTTCTTTTT--------------ACTA---------------------AATG...............................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TATG----TT----CATATATGTATAAT---------------------------------------------TGGA----------TC................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCCAGGGTCTGGACGC............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGCATTCCGCCAGGGTCTGGA...............2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................AATGTACG----CTTAGATACGAGTGGTA......................................2513.0030000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGACGCCCGTTACGGTG.2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TT---------------------------------------T-----------------GTATTTAATTTGAACTAGAA------................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACGCCCGTTACGGTG.2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TAAT---------------------------------------------TGGA----------TCTTTAGCTTGA......................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTACG----CTTAGATACGAGTGGT.......................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------AC..........................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGAACTAGAA------ATATACATAA-AAGAAAG---------------------.........................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000010000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................AGCTTGAATGATTAA----------------AGATG-------T.................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................CACTGTTCTT-------GGTGT----TGTTCTTTTC...............................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TA---------------------AATGTACG----CTTAGATACGAG...........................................2212.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTGGTAAACGCATTCCGC..........................2312.0020000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TTTGTCACTGTTCTT-------GGTGT----TGTTCTT..................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAGTGGTAAACGCATTCCGCCAG.......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................AACGCATTCCGCCAGGGTCT..................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGACGCCCGTTACGGT..2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAACGCATTCCGCCAGGGTCTGGA...............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................................................................................................................................................................................................................................................................................TCTT-------GGTGT----TGTTCTTTTCTTT............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................TTTGTCACTGTTCTT-------GGTGT----T........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCCAGGGTCTGGACGCCCGTT.......2511.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................TGTTCTT-------GGTGT----TGTTCTTTTCTTT............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCCGCCAGGGTCTGGACG.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................TTTGTCACTGTTCTT-------GGTGT----TGTTT....................................................................................................................2511.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAACGCATTCCGCCAGGGTCTG.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGCATTCCGCCAGGGTCT..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCTTTTT--------------ACTA---------------------AATGTACG----CTTAGATA...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCCCT-TTTGTCACTGTTCTT-------GGTGT----TT.......................................................................................................................2711.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TTTAGCTTGAATGATTAA----------------AGATG-------TTC...............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACGAGTGGTAAACGCT................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGGGTCTGGACGCCCGTTACGGT..2611.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGTCTGGACGCCCGTTAC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGTACG----CTTAGATACGAGTGGTAAACG..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droSim2
TT---------------------------------------T-----------------GTATTTAGTTTGAACTACAC------ATATACATAA-ATGAAAG---------------------TATG----TT----CAAATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGCTTGACTGATTAA----------------AGATG-------TTCTT--C----TTA---TACT---ATTG-TTTATGTCCCT-TTTGTCACTGTTCTC-------GGTTT----TGTTCTTTTCTTTTT--------------GCTA---------------------AATATACG----CTTAGATACGAGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGTTACGGTGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................T---------------------------------------------TGGA----------TCTTTAGCTTGACTGATTAA----------------AGA...........................................................................................................................................................................................................2812.00200000002000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGACGCCCGTTACGGT..2012.00200100000000100000
.....................................................................................................................................................................................................................................................................................................TGTCCCT-TTTGTCACTGTTCTC-------GGTTT----.........................................................................................................................2712.00200000002000000000
............................................................................................................................TATG----TT----CAAATGTGCATAAT---------------------------------------------TGGA----------..................................................................................................................................................................................................................................................2412.00200000001100000000
.............................................................................................................................................ATGTGCATAAT---------------------------------------------TGGA----------TCTT..............................................................................................................................................................................................................................................1911.00101000000000000000
.................................................................................................................................................GCATAAT---------------------------------------------TGGA----------TCTTTAGCTTGACT....................................................................................................................................................................................................................................2511.00101000000000000000
....................................................................................................................................................................................................................CTTTAGCTTGACTGATTAA----------------AG............................................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAACGCATTCCGCCAGGGTCTGGA...............2811.00100000001000000000
.....................................................................................................................................T----CAAATGTGCATAAT---------------------------------------------TGGA----------TC................................................................................................................................................................................................................................................2111.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGTCTGGACGCCCGTTACGGTGA2611.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTCCGCCAGGGTCTGGAC..............2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCCAGGGTCTGGACGCCCGTTA......2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................T--------------GCTA---------------------AATATACG----CTTAGATACGAG...........................................2511.00100000010000000000
...................................................................................................................................................................................................................................................................................................TATGTCCCT-TTTGTCACTGTTCTC-------GGT...............................................................................................................................2711.00100000010000000000
......................................................................................................................................................AT---------------------------------------------TGGA----------TCTTTAGCTTGACTG...................................................................................................................................................................................................................................2111.00100000001000000000
.....................................................................................................................................T----CAAATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGCT.........................................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................TTT--------------GCTA---------------------AATATACG----CTTAGATACGAG...........................................2711.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTGGTAAACGCATTCCGCCAGG......................2711.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGGTCTGGACGCCCGTTACGGTGA2711.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTCCGCCAGGGTCTGGACGCC...........2511.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTGGACGCCCGTTACGG...2011.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................TT--------------GCTA---------------------AATATACG----CTTAGATACGAG...........................................2611.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................TTCTC-------GGTTT----TGTTCTTTTCTTTTT--------------GC..........................................................................................2711.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................T--------------GCTA---------------------AATATACG----CTTAGATACGAGT..........................................2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................TTATGTCCCT-TTTGTCACTGTTCTC-------GGT...............................................................................................................................2811.00100000010000000000
..............................................................................................................................................................................................................................................................................................................TTGTCACTGTTCTC-------GGTTT----TGTTCTT..................................................................................................................2611.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCCAGGGTCTGGACGC............2011.00100100000000000000
....................................................................................................................................TT----CAAATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGC..........................................................................................................................................................................................................................................2811.00100000010000000000
......................................................................................................................................................................................................................................................................................................GTCCCT-TTTGTCACTGTTCTC-------GGTT..............................................................................................................................2511.00100000000100000000
.....................................................................................................................................................................................................................................................................................................TGTCCCT-TTTGTCACTGTTCTC-------GGTT..............................................................................................................................2611.00100000000000001000
.....................................................................................................................................................................................................................................................................................................TGTCCCT-TTTGTCACTGTTCT..........................................................................................................................................2111.00110000000000000000
.......................................................................................................................................................................................................................TAGCTTGACTGATTAA----------------AGATG-------TTCTT--...........................................................................................................................................................................................2611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCCAGGGTCTGGACGCCCGT........2511.00100000000001000000
...........................................................................................................................................................................................................................TTGACTGATTAA----------------AGATG-------TTCTT--C----TT....................................................................................................................................................................................2511.00100100000000000000
droSec2
TT---------------------------------------T-----------------GTATTTAGTTTGAACTACAC------ATAAACATAA-ATGAAAG---------------------TGTG----TT----CAAATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGCTTGACTGATTAA----------------AGATG-------TTCTT--C----TTA---TACT---A-TG-TTTATGTCCCT-TTTGTCACTGTTCTC-------GGTTT----TGTTCTTTTCTTTTT--------------GCTA---------------------AATATACG----CTTAGATACGAGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGTTACGGTGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGACGCCCGTTACGGTG.2111.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCAGGGTCTGGACGCCCGTTA......2411.0011000
..................................................................................................................................................CATAAT---------------------------------------------TGGA----------TCTTTAGCTTGAC.....................................................................................................................................................................................................................................2311.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGGGTCTGGACGCCCGT........2111.0011000
droYak3
CTT--------------------------------------T-----------------GTATTTCATTTCAACTATAC------ATATACTTAA-ATGAACG---------------------TATG----TT----CATATGTACACAAT---------------------------------------------TGGA----------TATTTAGCTTGACTGATTAA----------------AAAAT-------TTCTT--C-----TA---TACT---GTTT-TTAATGTCTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CTTAGATTCGTGTGGTAAACGCATTCCGCCAGGGTCTGGACGCCCGGTACGGGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGTGGTAAACGCATTCCGCCAGG......................2611.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTTAGATTCGTGTGGTAAACG..................................2111.00101000000000
......................................................................................................................................................................................................GGA----------TATTTAGCTTGACTGATT................................................................................................................................................................................................................................2111.00101000000000
.......................................................................................................................................................................................................................................................................................................................................T----TGTTCTTTTCTTTTT--------------ACTA---------------------...................................................................2011.00101000000000
droEre2
CTT--------------------------------------T-----------------GTATTTCATTTAAACTATAC------ATATACATA--AAGAACG---------------------TATGTATGTT----CATATGTGCATAAT---------------------------------------------TGGA----------TCTTTAGCTTGACTGATAAA----------------ATTTG-------TT-----C----TTA---TACT---GTTT-TTTATGTCTCT-TTTGTCACTGTTCTT-------GGTGT----TGTTCTTTTCTTTTT--------------ACTA---------------------AATGTACG----CGTAGATTCGTGTGGTAAACGCATTCCGACAGGGTCTGGACGCCCGTTATGGTGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................CATA--AAGAACG---------------------TATGTATGTT----...........................................................................................................................................................................................................................................................................................................................2111.0010000100

Generated: 05/16/2015 at 09:43 PM