ID:

dvi_2203

 Coordinate:

scaffold_12758:620012-620162 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_15944:2]; CDS [Dvir\GJ15522-cds]; intron [Dvir\GJ15522-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTAAATAACAAGCACGCCAGTTCCCATCCGTTTGATGAATGTTCAACCGTCGCTTTCAATGAGTTCCGTTCTAGCGACTCGCTCCGTTTGATGGACCACACACACAGCGCGTTCATCAAATATTTATTTGTTTTTCTGTCTTTTTTTTGCGTATTCGACAAGGTGTTAAATAAATTTTTGTTATTTTCGATTTGCTTACAGTTCTACTGGCATGCTTCATGCAGGAAACGGAGGCCACGCGACGCGTGAAT
**************************************************.((((.....))))........(((((.(((....(((((((((((..............)))))))))))(((((((((....((((((................))).)))...)))))))))............))).))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060672
9x160_females_carcasses_total
 V047
embryo
 SRR060657
140_testes_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060660
Argentina_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060688
160_ovaries_total
................................................................................................................................................................................................................................GAAACGGAGGCCACGCGACGC...... 21 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ATGCTTCATGCAGGAAACGGAGGC................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AAACGGAGGCCACGCGACGCGTGAAT 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GGAGGCCACGCGACGCGTGA.. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GCAGGAAACGGAGGCCACGC........... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................AACGGAGGCCACGCGACGCGTGA.. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................ATGAATGTTAGACCGTCG....................................................................................................................................................................................................... 18 2 2 1.00 2 0 0 0 0 0 0 0 1 1 0 0 0
........................................................................................................................................................................................................................TCATGCAGGAAACGGAGGCCACGC........... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCAAGCAGGAAACGGAGGCCACGCGACGC...... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GAAACGGAGGCCACGTGACGC...... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GCAGGAAACGGAGGCCACGCGACGC...... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ATGCTTCATGCAGGAAAC...................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CTACTGGCATGCTTCATGCAGGAAAC...................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTGGTTCTACTGGCATGCTTCATGCA............................ 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ATGTTTCATGCAGGAAACGGA................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGTCCTACTGGCATGCTTCATGCA............................ 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGAAACGGAGGCCACGCGAC........ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CTACTGGCATGGTTCATGCA............................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................CATGAATGTTAGACCGTCG....................................................................................................................................................................................................... 19 3 7 0.71 5 0 0 0 0 0 0 0 0 0 3 1 1
....................................................GTGTCAAGGAGTTCCGTTC.................................................................................................................................................................................... 19 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................ATAGACTACACACACAGC............................................................................................................................................... 18 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CATTTATTGTTCGTGCGGTCAAGGGTAGGCAAACTACTTACAAGTTGGCAGCGAAAGTTACTCAAGGCAAGATCGCTGAGCGAGGCAAACTACCTGGTGTGTGTGTCGCGCAAGTAGTTTATAAATAAACAAAAAGACAGAAAAAAAACGCATAAGCTGTTCCACAATTTATTTAAAAACAATAAAAGCTAAACGAATGTCAAGATGACCGTACGAAGTACGTCCTTTGCCTCCGGTGCGCTGCGCACTTA
**************************************************.((((.....))))........(((((.(((....(((((((((((..............)))))))))))(((((((((....((((((................))).)))...)))))))))............))).))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060658
140_ovaries_total
 V053
head
 M047
female body
.................................................................................................TGTGTGTGTCGCGCAAGTAGT..................................................................................................................................... 21 0 1 1.00 1 1 0 0
......................................TGTAAGTTGGCAGCGAAGGT................................................................................................................................................................................................. 20 3 9 0.11 1 0 1 0
.............................................................................................................................TAAACAAAAAGTCAGGAAGAAA........................................................................................................ 22 3 12 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12758:619962-620212 + dvi_2203 G-TAA-------------ATAAC-----AAGC--ACGCCAGTTCCCATCCGTTTGATGAATGTTCA---------------------------------------ACCG-----TCGCTT---TCAATGAGTTCCGTTCT-----------AGCGAC-------TCGCTC---------------------------CGT-TTGATGG---A------------------------------------------CCACACACAC--AGCGCG--TTCATC---------AAATATT---TATTTGTT----TTTCTGTCT---T--------------------------------------------TTTTTTGCG--TATT---CG---------------------------------------------------------------------ACAAGGTGTTAAATA-AATTTTT-------GT----TAT---TTTCGAT---------------TTGCTTACAGTTCTACTGGCATGCTTCATGCAGGAAACGGAGGCCACGCGACGCGTGAAT
droMoj3 scaffold_6680:1691652-1691932 + CGCTT-----------------------TGCT--A----------TGTTTTTTTGATGAATGCTCA---------------------------------------A-CT-----TCGTTT---TCAATGAGTTCCGTTCT-----------AGCGTC-------T----------CATCGTTCG--------CTC--TGT-TTGATG-------C------------------------------------GGACC--ACACAC--AATGCG--TTCTTC---------AAATAAT---TGTTTG--------TGTTTGT---TTTTGCTCTCG---------------------------------------------------CTTTT--------TGCTTA--------------------TTTCTCTTTCTCTCTCTGTATTGATAATCATCGACAAGGTGCTAAATATCATAATTTGTAT-TG------------TTAT--T------------CTTTATTTACAGTTCTATTGGCATGCTGCTTGCAGGAAACAGAGGCCACGCGACGCGTGAAT
droGri2 scaffold_15110:861258-861508 - T-TCT-----------------------CATC--A----------TCTCTGTTTGATTAATGATTAACGT-----------------------------------CGTT-----TTTGTTTTTGGCCCGAGTTCCGTTCTTGCCACG----TTC-----------CG-------------CTCT--------G--TTTGT-TTAATG---------------------------------------------GGCC--ACACAC--AGCGCG--ATCTTC---------ACATATT---TTATTG-------TTATTTTT---AT-----------------------------------------TTTCTTTAGTT--TTTTC--TC---------------------------------------------------------------------ACAAGGTGTTAAATA-AATAATT-------GGCTTCTAT---TTTTG-----------------GCTCTTACAGTTCTTTTGGCATGCTGCTTGCAGGAAACAGAAGCAACGCGGCGTGTAAAT
droWil2 scf2_1100000004511:10417527-10417862 - G-CAA-------------ATAGC-----AAGA--A----------TGTCTGTTTGATGAATGGTGA---------------------------------------ACAT-----G-AGTT---TCGCCAAGTTCCGTTCCG-TTCCATTCTGGCGAATAAACTTTT------------GGATGGTTTTTTCTCGT--CAT-TTGATGG---ATAGTTCAAAGTCAAGATTG--------------------------------------ACG--TTCTTC---------AAATATT---A--------------TAGTTA---TTTGCAATTTGAAC--AATTTGTTA-GC----AGCTAATTTTATTCTTTGTTTT--GTTTT-TTTTTT-TTC-------------TTT-----TTTGTTGAATTTCTTTTCTTAATTTGTGTT-----------------------------TTTTTCT----T----------------GCTTTGCTTTATTTACTCTTCTTGACAGTTCTTATGGCCTGTTTGATGCAGGAAACGGAGGCCACGCGACGCGTTAAT
dp5 XR_group8:3054453-3054777 + G-CAG-----------CAACAAT-----AGAT--A----------GATCTATATGATGAATGGTGAGCGGTGGTGCGGTGGTGCGGAGGTGCGGAGGTGCGGAGGTGGT-----GTTTTT---TCAATGAGTTCCGTTCCG----------TGCGGT-------CCG----------------------------------TTGATGG---ATGCCTCAAAGCCA----------CACAGCTGGTGG---CTGACC--ACACACGGCGCGCG--TTCTTC---------AAATAAA---T--------------ATGTAT---TCTGCGACTTAGACTTGAATTG----TT----A----AC----ATGGTCGAGTG--GCTCT-TGTA---------------------------------------------------------------------CAAAGTTTTAAATA---TATTTTTT--A-T--------------GGATTT-----------GCTTCTTTGCAGTTTTGCTGGCCTGCTGCTTGGAGGAGACGGAGGCCACGCGACGCGTTAAC
droPer2 scaffold_465:13064-13372 - G-CAG-----------CAACAAT-----AGAT--A----------GATCTATATGATGAATGGTGAACGGTGGTGCGGTGGTGCG----------------GTGGTGGT-----GTTTTT---TCAATGAGTTCCGTTCCG----------TGCGGT-------CCG----------------------------------TTGATGG---ATGCCTCAAAGCCA----------CACAGCTGGTGG---CTGACC--ACACACAGCGCGCG--TTCTTC---------AAATAAA---T--------------ATGTAT---TCTGCGACTTAGACTTGAATTG----TT----A----AC----ATGGTCGAGTG--GCTCT-TGTA---------------------------------------------------------------------CAAAGTTTTAAATA---TATTTTTT--A-T--------------GGATTT-----------GCTTCTTTGCAGTTTTGCTGGCCTGCTGCTTGGAGGAGACGGAGGCCACGCGACGCGTTAAC
droAna3 scaffold_13337:2993617-2993716 + G-CGCTTCGGCCCCAGC--------ATGTTGAAGA----------GATCTATATGATGAATGGCCT---------------------------------------GGGTTCCACGTTGTT---TCAATGAGTTCCGTTCCG----------AGCGGT-------TTGGCTCGCTTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396378:301334-301393 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTCAGTGCTGCTGGCTTGTTGCATGCCGGAAACGGAGGCCACGCGACGCGTGAAC
droKik1 scf7180000302351:524459-524739 + G-TAG-----------ATCCAAGATACGCTGA--A----------GCTCTATATGATGAATGGT-------------------------------------------------------T---GAAATGAGTTCCGTTT--------------------------TGGCTCGCTTTATGGCTCC-------------GGT-TTGATGG---ATGCCTCAAAGCCAT----------A----AAGCCACCTTCGAA------G-------GTG--GT-----------------------------------------------------CTTCGGAC--AAATCACAG-CT----A----ACTCGAGTGCTCGAGTG--CCTCT-CGTTTTACTCTGTAATTATTATATGTTTTATT-------------------------------------------------TAATTA-ATT-----TTA--TCT----TCT---TT--T--TT-----------TCTGGTTTTTAGTTTTGCTGGCCTGCGTTTTGCAGGAAACGGAGGCCACGCGACGCGTGAAC
droFic1 scf7180000454065:661424-661740 - G-CAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCC---------------------------------------GGCT-----GTTGTT---TCAATGAGCTCCGTTCCG----------AGCGGT-------TTGGCTCGCTTTATGGCTTG-------------GGG-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCGCAGCGGGCCACCTTCGACC--ACACGC--GGCGAG--TTCGTT---------AAATACA---T--------------ATATGT---TTTGCGTCTCGGAC--AAATCACTC-CC----A----AC----ATGCTCGAGTG--CCCCC-TGTCT--------AATAAATAT---------A----------------------------------------------------------TATTTTTTA--TGT----TTTTTTTTTCGAT-------------TTTTATTCGCAGTTCTGCTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGGCGCGTGAAC
droEle1 scf7180000491249:5864990-5865285 + G-CAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------CGGT-----GTTGTT---TCAATGAGTTCCGTTCCG----------AGCGCT-------TTGGCTCGCTTCATGGCTGGGATT------T--GAT-TTGATGA---CTGCTTCAAAGCCAATGC-------------------CTTCGACC--ACACGC--GGCGTA--TACGTT---------AAAT---------------------GTGTGTTTTTTTGCGCCTCGGAC--AAATCACTC-GC----A----AC----ATGCTCGAGTG--CCCCC-TGTCT--------AATTTATAT---------A-----------------------------------------------------CT---TATTT-------TT----TAT---TTTTG--AT-----------TCTTTTTCGCAGTTCTGCTGGCCTGCTGCTTGCAGGAATCGGAGGCCACGCGACGCGTGAAC
droRho1 scf7180000772813:8090-8391 - G-CAT-----------------------CTGA--A----------GATCTATATGATGAATGGTCG---------------------------------------TGGT-----GTTATT---TCAATGAGTTCCGTTCCG-AAGCG----AGCGGT-------TTGGCTCGCTTTATGGCTGG-------------GTT-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCGCAGCGGGCCACCTTCGACC--ACACGC--AGCGTA--TACGTT---------AAATA---------------------TATGT---TTTGCGCCTCGGAC--AAATCACTC-CC----A----AC----ATGCTCGAGTG--CCCCC-TGTCT--------AAAATACAT---------T----------------------------------------------------------T--TT-------TA--------------AAT-A-----------TTTTTTTTGCAGTTCTGCTGGCTTGCTGCTTGCAGGAATCGGAGGCCACGCGACGCGTGAAC
droBia1 scf7180000302428:2071986-2072262 - A-CAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGTG-----GTTATT---TCAATGAGTTCCGTTT---------------------------GGCT-GCTTTGTGGCTTG-------------GGC-TTGATGG---ATGCTTCAAAGCCAATGCCGCATTCTCGACGGGCCACCTTCGGCC--ACACGC--GGCGGT---TGGGT---------AAAAAAT---TAT---------------------------------AC--AAATCACTC-CCAGAAA----AC----ATGCTCGAGTG--CCCCCACCTCC--------AATGTA--T---------C----------------------------------------------------------TTTTT-------C---------------GCT-T-----------TTTATTTCGCAGTTCTGCTGGCTTGCTTCTTGCAGGAATCGGAGGCCACGCGCCGTGTGAAC
droTak1 scf7180000415157:28122-28407 + GGCAG-----------------------CCGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGGT-----GTTGTT---TCAATGAGTTCCGTTT---------------------------GGCTCGCTTTACGGCTTG-----------TGGGG-TTGATGGTTGAGGCTTCAAAGCCAATGCCGCGAAAGCAGCGGGCCACCTTCGACC--ACACGC--GGTGATAGATGGTT---------AAAAAAAA--TAT------------ATATG------------------------TACTC-CCAGA-A----AT----AAGCTCGAGTG--CCCATATGTCT--------AATATA--T---------T----------------------------------------------------------TTATT-------T--------------AT--AA-----------TTTTTTTTGCAGTTCTGCTGGCTTGCTTTTTGCAGGAAACGGAGGCCACGCGACGTGTGAAC
droEug1 scf7180000409466:2683588-2683897 + G-GAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCA---------------------------------------TGCT-----GTTATT---TCAATGAGTTCCGTTCCG----------AGTGGT-------TTGGTTCGCTTTATGGCTTG-------------GGGTTGGATGG---ATGCTTCAAAGCCAATGCCGCAATCGCAGCGGGCCACCTTCGACC--ACACGC--GGCGTC--TTCGTG---------AAAAAAAAATT------------ATATGTCT---TCTACGCCTCGGAC--AAATCACTCTCC----A----AC----ATGCTCGAGTG--CCCC-ATGTCT--------AATATAAAT---------T----------------------------------------------------------TTATT-------T--------------CGATA------------TTTTTTTTGCAGTTCTGCTGGCCTGCTGTCTGCAGGAATCGGAGGCCACGCGCCGTGTGAAC
dm3 chr3L:4900052-4900326 + G-CAT-----------------------TTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGCT-----GTTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GGT-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCTTACCAGGCCACCTTCGACC--ACACGC--CGCGTG--ATCATT---------GAAAAAA---TGTG--T---ATGATGTGTGT---TTTGCGCCTCGGAC--GAATCACT-------------------------------------ATGTCT--------AACAAATAT---------T----------------------------------------------------------AAATT-------TG----TAT---ATTCT--TT-----------TCTATTCTGTAGTACTGTTGGCCTGCTGCCTGCAAGAATCGGAGGCCACGCGACGTGTGAAC
droSim2 3l:4845545-4845841 + dsi_20248 G-CAT-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGCT-----GCTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTCG-------------GGC-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCTTAGCAGGCCACCTTCGACC--ACACGC--CGCGTG--ATCATT---------GAAGAAA---TGTG--CT----GATGTGTGT---TTTGCGCCTCGGAC--AAATCATTA-CC----A----AA----CTACTCGAGTGTGCCCTCATG-CT--------AAAAAATAT---------T----------------------------------------------------------TAATT-------TG----TTT---TTTCT--TT-----------TCTATTTTTCAGTACTGCTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGTCGAGTGAAC
droSec2 scaffold_2:4886739-4887036 + A-CAT-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGCT-----GCTATT---TTAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GGC-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCTTAGCAGGCCACCTTCGACC--ACACGC--CGCGTG--ATCATT---------GAAAAAA---TGTG--CT----GATGTGTGT---TTTGCGCCTCGGAC--AAATCATTC-CC----A----AA----CTACTCGAGTGTGCCCTCATGTCT--------AAAAAATAT---------T----------------------------------------------------------TAATT-------AG----TTT---TTTCT--TC-----------TATATTTTGCAGTACTGTTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGACGAGTGAAC
droYak3 3L:5486049-5486341 + ----------------------------CTGA--A----------GATCTATATGATGAATGGTCA---------------------------------------TGCT-----GCTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GGG-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATC-------------TCCGACC--ACACGC--CGCGTG--ATCACTGAAATCATTGAAAAAA---TGTG--CTGTGTGATGTGTGT---TTTGCGCCTT------AAATCACTC-CC----A----AT----CTACTCGAGTG--CCCCCATGTCT--------AATTAATAT---------T----------------------------------------------------------TTTTTTTTT-T-TG----TAT---TTTCT--AT-----------TCTATTTTGCAGTACTGCTCGCCTGCTGTCTGCAGGAATCGGAGGCCACGCGACGTGTGAAC
droEre2 scaffold_4784:7618496-7618766 + G-CGT-----------------------TGGA--A----------GATCTACATGATGAATGGTCT---------------------------------------TGCT-----GCTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTT--------------GGT-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCGTAGTGGGCCACCTTCGACC--ACACGC--CGCGTG--ATCACT---------GAAAAAA---TGTG--CT----GATTTGTGT---TTTGC---------------------------------------TACTCGAGTG--CCCCCCTGTCT--------TACAAACAT---------T----------------------------------------------------------TAATT-------CC----AAT---TTTCT--AC-----------TCTACTTTGCAGTGCTGCTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGCCGTGTGAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
G-TAA-------------ATAAC-----AAGC--ACGCCAGTTCCCATCCGTTTGATGAATGTTCA---------------------------------------ACCG-----TCGCTT---TCAATGAGTTCCGTTCT-----------AGCGAC-------TCGCTC---------------------------CGT-TTGATGG---A------------------------------------------CCACACACAC--AGCGCG--TTCATC---------AAATATT---TATTTGTT----TTTCTGTCT---T--------------------------------------------TTTTTTGCG--TATT---CG---------------------------------------------------------------------ACAAGGTGTTAAATA-AATTTTT-------GT----TAT---TTTCGAT---------------TTGCTTACAGTTCTACTGGCATGCTTCATGCAGGAAACGGAGGCCACGCGACGCGTGAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGAGGCCACGCGACGC......2112.002001000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTTCATGCAGGAAACGGAGGC................2411.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGAGGCCACGCGACGCGTGAAT2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCCACGCGACGCGTGA..2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGAAACGGAGGCCACGC...........2011.001000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGAGGCCACGCGACGCGTGA..2311.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGCAGGAAACGGAGGCCACGC...........2411.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGAAACGGAGGCCACGCGACGC......2511.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTTCATGCAGGAAAC......................1811.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGGCATGCTTCATGCAGGAAAC......................2611.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACGGAGGCCACGCGAC........2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGCTT-----------------------TGCT--A----------TGTTTTTTTGATGAATGCTCA---------------------------------------A-CT-----TCGTTT---TCAATGAGTTCCGTTCT-----------AGCGTC-------T----------CATCGTTCG--------CTC--TGT-TTGATG-------C------------------------------------GGACC--ACACAC--AATGCG--TTCTTC---------AAATAAT---TGTTTG--------TGTTTGT---TTTTGCTCTCG---------------------------------------------------CTTTT--------TGCTTA--------------------TTTCTCTTTCTCTCTCTGTATTGATAATCATCGACAAGGTGCTAAATATCATAATTTGTAT-TG------------TTAT--T------------CTTTATTTACAGTTCTATTGGCATGCTGCTTGCAGGAAACAGAGGCCACGCGACGCGTGAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGCTGCTTGCAGGAAACAGA...................2413.003100002
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGCATGCTGCTTGCAGG..........................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAGGCCACGCGACGCGTGA..2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGGAAACAGAGGCCACG............2111.001000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGCATGCTGCTTGCAGGAAACAGA...................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGCTGCTTGCAGGAAACAGAGGC................2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATGCTGCTTGCAGGAAACAGAG..................2811.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGCTTGCAGGAAACAGAGGC................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAAACAGAGGCCACGCGACGC......2411.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGAGGCCACGCGACGCGTGAAT2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATGCTGCTTGCAGGAAACAGA...................2711.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGCTGCTTGCAGGA.........................1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGGCATGCTGCTTGCAGGA.........................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATGCTGCTTGCAGGAAACA.....................2511.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGCTTGCAGGAAACAGA...................2111.001000001
droGri2
T-TCT-----------------------CATC--A----------TCTCTGTTTGATTAATGATTAACGT-----------------------------------CGTT-----TTTGTTTTTGGCCCGAGTTCCGTTCTTGCCACG----TTC-----------CG-------------CTCT--------G--TTTGT-TTAATG---------------------------------------------GGCC--ACACAC--AGCGCG--ATCTTC---------ACATATT---TTATTG-------TTATTTTT---AT-----------------------------------------TTTCTTTAGTT--TTTTC--TC---------------------------------------------------------------------ACAAGGTGTTAAATA-AATAATT-------GGCTTCTAT---TTTTG-----------------GCTCTTACAGTTCTTTTGGCATGCTGCTTGCAGGAAACAGAAGCAACGCGGCGTGTAAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
G-CAA-------------ATAGC-----AAGA--A----------TGTCTGTTTGATGAATGGTGA---------------------------------------ACAT-----G-AGTT---TCGCCAAGTTCCGTTCCG-TTCCATTCTGGCGAATAAACTTTT------------GGATGGTTTTTTCTCGT--CAT-TTGATGG---ATAGTTCAAAGTCAAGATTG--------------------------------------ACG--TTCTTC---------AAATATT---A--------------TAGTTA---TTTGCAATTTGAAC--AATTTGTTA-GC----AGCTAATTTTATTCTTTGTTTT--GTTTT-TTTTTT-TTC-------------TTT-----TTTGTTGAATTTCTTTTCTTAATTTGTGTT-----------------------------TTTTTCT----T----------------GCTTTGCTTTATTTACTCTTCTTGACAGTTCTTATGGCCTGTTTGATGCAGGAAACGGAGGCCACGCGACGCGTTAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGAGGCCACGCGACGC......2112.00201100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATGCAGGAAACGGAGGCCACG............2612.00201100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGAGGCCACGCGACGC......1912.00201100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATGCAGGAAACGGAGGC................2211.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACGGAGGCCACGCGACGC......2211.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACGGAGGCCACGCGAC........2011.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGCAGGAAACGGAGGC................2111.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGGCCTGTTTGATGCA............................2011.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGGAAACGGAGGCCAC.............2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATGCAGGAAACGGAGG.................2111.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGAGGCCACGCGACGCGTTAAT2711.00101000
......................................................................................................................................................................................................AT-TTGATGG---ATAGTTCAAAGTC.....................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGCAGGAAACGGAGGC................2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATGCAGGAAACGGAGGCC...............2311.00100100
dp5
G-CAG-----------CAACAAT-----AGAT--A----------GATCTATATGATGAATGGTGAGCGGTGGTGCGGTGGTGCGGAGGTGCGGAGGTGCGGAGGTGGT-----GTTTTT---TCAATGAGTTCCGTTCCG----------TGCGGT-------CCG----------------------------------TTGATGG---ATGCCTCAAAGCCA----------CACAGCTGGTGG---CTGACC--ACACACGGCGCGCG--TTCTTC---------AAATAAA---T--------------ATGTAT---TCTGCGACTTAGACTTGAATTG----TT----A----AC----ATGGTCGAGTG--GCTCT-TGTA---------------------------------------------------------------------CAAAGTTTTAAATA---TATTTTTT--A-T--------------GGATTT-----------GCTTCTTTGCAGTTTTGCTGGCCTGCTGCTTGGAGGAGACGGAGGCCACGCGACGCGTTAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCTTGGAGGAGACGG....................2013.0030300000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGAGGCCACGCGACGC......1913.0030210000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTTGGAGGAGACGGAGG.................2112.0020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTTGGAGGAGACGGA...................2012.0020100001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCTTGGAGGAGACGGAGGC................2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTTGGAGGAGACGGAGGC................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTTGGAGGAGACGG....................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTTGGAGGAGACGG....................1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGCTGGCCTGCTGCTTGGA............................2311.0010100000000
......................................................GATGAATGGTGAGCGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCTTGGAGGAGACGGA...................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTTGGAGGAGACGGAGGCCACGC...........2711.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTTGGAGGAGACGGAGGC................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTTGGAGGAGACGGA...................1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGAGGAGACGGAGGCC...............2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGAGGAGACGGAGGC................1811.0010100000000
droPer2
G-CAG-----------CAACAAT-----AGAT--A----------GATCTATATGATGAATGGTGAACGGTGGTGCGGTGGTGCG----------------GTGGTGGT-----GTTTTT---TCAATGAGTTCCGTTCCG----------TGCGGT-------CCG----------------------------------TTGATGG---ATGCCTCAAAGCCA----------CACAGCTGGTGG---CTGACC--ACACACAGCGCGCG--TTCTTC---------AAATAAA---T--------------ATGTAT---TCTGCGACTTAGACTTGAATTG----TT----A----AC----ATGGTCGAGTG--GCTCT-TGTA---------------------------------------------------------------------CAAAGTTTTAAATA---TATTTTTT--A-T--------------GGATTT-----------GCTTCTTTGCAGTTTTGCTGGCCTGCTGCTTGGAGGAGACGGAGGCCACGCGACGCGTTAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................CGTTCCG----------TGCGGT-------CCG----------------------------------TT..........................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGAGGCCACGCGACGC......1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCTTGGAGGAGACGGAGGC................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGCTGCTTGGAGGA.........................1811.001010000
.......................................................................................................................................................................................................................................................................................................A---T--------------ATGTAT---TCTGCGACTT........................................................................................................................................................................................................................................................1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGACGGAGGCCACGCGA.........1911.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCTTGGAGGAGACGGA...................2111.001100000
.....................................................................GTGGTGCGGTGGTGCG----------------GTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.674010003
droAna3
G-CGCTTCGGCCCCAGC--------ATGTTGAAGA----------GATCTATATGATGAATGGCCT---------------------------------------GGGTTCCACGTTGTT---TCAATGAGTTCCGTTCCG----------AGCGGT-------TTGGCTCGCTTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTCAGTGCTGCTGGCTTGTTGCATGCCGGAAACGGAGGCCACGCGACGCGTGAACSizeHit CountTotal NormTotal
No Reads
droKik1
G-TAG-----------ATCCAAGATACGCTGA--A----------GCTCTATATGATGAATGGT-------------------------------------------------------T---GAAATGAGTTCCGTTT--------------------------TGGCTCGCTTTATGGCTCC-------------GGT-TTGATGG---ATGCCTCAAAGCCAT----------A----AAGCCACCTTCGAA------G-------GTG--GT-----------------------------------------------------CTTCGGAC--AAATCACAG-CT----A----ACTCGAGTGCTCGAGTG--CCTCT-CGTTTTACTCTGTAATTATTATATGTTTTATT-------------------------------------------------TAATTA-ATT-----TTA--TCT----TCT---TT--T--TT-----------TCTGGTTTTTAGTTTTGCTGGCCTGCGTTTTGCAGGAAACGGAGGCCACGCGACGCGTGAACSizeHit CountTotal NormTotal
No Reads
droFic1
G-CAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCC---------------------------------------GGCT-----GTTGTT---TCAATGAGCTCCGTTCCG----------AGCGGT-------TTGGCTCGCTTTATGGCTTG-------------GGG-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCGCAGCGGGCCACCTTCGACC--ACACGC--GGCGAG--TTCGTT---------AAATACA---T--------------ATATGT---TTTGCGTCTCGGAC--AAATCACTC-CC----A----AC----ATGCTCGAGTG--CCCCC-TGTCT--------AATAAATAT---------A----------------------------------------------------------TATTTTTTA--TGT----TTTTTTTTTCGAT-------------TTTTATTCGCAGTTCTGCTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGGCGCGTGAACSizeHit CountTotal NormTotal
No Reads
droEle1
G-CAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------CGGT-----GTTGTT---TCAATGAGTTCCGTTCCG----------AGCGCT-------TTGGCTCGCTTCATGGCTGGGATT------T--GAT-TTGATGA---CTGCTTCAAAGCCAATGC-------------------CTTCGACC--ACACGC--GGCGTA--TACGTT---------AAAT---------------------GTGTGTTTTTTTGCGCCTCGGAC--AAATCACTC-GC----A----AC----ATGCTCGAGTG--CCCCC-TGTCT--------AATTTATAT---------A-----------------------------------------------------CT---TATTT-------TT----TAT---TTTTG--AT-----------TCTTTTTCGCAGTTCTGCTGGCCTGCTGCTTGCAGGAATCGGAGGCCACGCGACGCGTGAACSizeHit CountTotal NormTotal
No Reads
droRho1
G-CAT-----------------------CTGA--A----------GATCTATATGATGAATGGTCG---------------------------------------TGGT-----GTTATT---TCAATGAGTTCCGTTCCG-AAGCG----AGCGGT-------TTGGCTCGCTTTATGGCTGG-------------GTT-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCGCAGCGGGCCACCTTCGACC--ACACGC--AGCGTA--TACGTT---------AAATA---------------------TATGT---TTTGCGCCTCGGAC--AAATCACTC-CC----A----AC----ATGCTCGAGTG--CCCCC-TGTCT--------AAAATACAT---------T----------------------------------------------------------T--TT-------TA--------------AAT-A-----------TTTTTTTTGCAGTTCTGCTGGCTTGCTGCTTGCAGGAATCGGAGGCCACGCGACGCGTGAACSizeHit CountTotal NormTotal
No Reads
droBia1
A-CAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGTG-----GTTATT---TCAATGAGTTCCGTTT---------------------------GGCT-GCTTTGTGGCTTG-------------GGC-TTGATGG---ATGCTTCAAAGCCAATGCCGCATTCTCGACGGGCCACCTTCGGCC--ACACGC--GGCGGT---TGGGT---------AAAAAAT---TAT---------------------------------AC--AAATCACTC-CCAGAAA----AC----ATGCTCGAGTG--CCCCCACCTCC--------AATGTA--T---------C----------------------------------------------------------TTTTT-------C---------------GCT-T-----------TTTATTTCGCAGTTCTGCTGGCTTGCTTCTTGCAGGAATCGGAGGCCACGCGCCGTGTGAACSizeHit CountTotal NormTotal
No Reads
droTak1
GGCAG-----------------------CCGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGGT-----GTTGTT---TCAATGAGTTCCGTTT---------------------------GGCTCGCTTTACGGCTTG-----------TGGGG-TTGATGGTTGAGGCTTCAAAGCCAATGCCGCGAAAGCAGCGGGCCACCTTCGACC--ACACGC--GGTGATAGATGGTT---------AAAAAAAA--TAT------------ATATG------------------------TACTC-CCAGA-A----AT----AAGCTCGAGTG--CCCATATGTCT--------AATATA--T---------T----------------------------------------------------------TTATT-------T--------------AT--AA-----------TTTTTTTTGCAGTTCTGCTGGCTTGCTTTTTGCAGGAAACGGAGGCCACGCGACGTGTGAACSizeHit CountTotal NormTotal
No Reads
droEug1
G-GAG-----------------------CTGA--A----------GATCTATATGATGAATGGTCA---------------------------------------TGCT-----GTTATT---TCAATGAGTTCCGTTCCG----------AGTGGT-------TTGGTTCGCTTTATGGCTTG-------------GGGTTGGATGG---ATGCTTCAAAGCCAATGCCGCAATCGCAGCGGGCCACCTTCGACC--ACACGC--GGCGTC--TTCGTG---------AAAAAAAAATT------------ATATGTCT---TCTACGCCTCGGAC--AAATCACTCTCC----A----AC----ATGCTCGAGTG--CCCC-ATGTCT--------AATATAAAT---------T----------------------------------------------------------TTATT-------T--------------CGATA------------TTTTTTTTGCAGTTCTGCTGGCCTGCTGTCTGCAGGAATCGGAGGCCACGCGCCGTGTGAACSizeHit CountTotal NormTotal
No Reads
dm3
G-CAT-----------------------TTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGCT-----GTTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GGT-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCTTACCAGGCCACCTTCGACC--ACACGC--CGCGTG--ATCATT---------GAAAAAA---TGTG--T---ATGATGTGTGT---TTTGCGCCTCGGAC--GAATCACT-------------------------------------ATGTCT--------AACAAATAT---------T----------------------------------------------------------AAATT-------TG----TAT---ATTCT--TT-----------TCTATTCTGTAGTACTGTTGGCCTGCTGCCTGCAAGAATCGGAGGCCACGCGACGTGTGAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAATCGGAGGCCAC.............1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCTGCAAGAATCGGAGG.................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
..............................................................................................................................................................................................................................................................................................................G--T---ATGATGTGTGT---TTTGCGCCT.........................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCCTGCAAGAATCGGAGGC................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000
...........................................................................................................................TCAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GG..............................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATCGGAGGCCACGC...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGAATCGGAGGCCACGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ATT---TCAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GGT-............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGTTGGCCTGCTGCCT...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCCTGCAAGAATCGGAGG.................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................ATCTATATGATGAATGGTCT---------------------------------------TGCT-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCTGCAAGAATCGGAGGCCACGC...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTCCGTTT---------------------------------------GGCTTG-------------GGT-TTGATGG---A.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAAGAATCGGAGGC................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................GG---ATGCTTCAAAGCCAATGC................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCACGCGACGTGTGAAC2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCAAGAATCGGAGGCCACGCGAC........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GAAAAAA---TGTG--T---ATGATGTGTGT---TTTG..............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATCGGAGGCCACGCGACG.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCCTGCAAGAATCGGAG..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGAATCGGAGGCCA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATCGGAGGCCACGCGACGTGTG...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................TGCT-----GTTATT---TCAATGAGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ATGATGTGTGT---TTTGCGC...........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATCGGAGGCCACGCGAC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCAAGAATCGGAGGC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCACGCGACGTGTGA..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCAAGAATCGGAGGC................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CGTTT---------------------------------------GGCTTG-------------GGT-TTGATGG---..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAATCGGAGGCCACGCGACGTGTG...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCTGCAAGAATCGGAGGCCACG............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................A---TGTG--T---ATGATGTGTGT---TTTGC.............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................G--T---ATGATGTGTGT---TTTGCGCC..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................AATGGTCT---------------------------------------TGCT-----GTTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CGTTT---------------------------------------GGCTTG-------------GGT-TTGATGG---ATGCT.............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGAATCGGAGGCCACGCGAC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCAAGAATCGGAGG.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droSim2
G-CAT-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGCT-----GCTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTCG-------------GGC-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCTTAGCAGGCCACCTTCGACC--ACACGC--CGCGTG--ATCATT---------GAAGAAA---TGTG--CT----GATGTGTGT---TTTGCGCCTCGGAC--AAATCATTA-CC----A----AA----CTACTCGAGTGTGCCCTCATG-CT--------AAAAAATAT---------T----------------------------------------------------------TAATT-------TG----TTT---TTTCT--TT-----------TCTATTTTTCAGTACTGCTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGTCGAGTGAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................ATCTATATGATGAATGGTCT---------------------------------------TGCT-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.00600200000004000000
..............................................ATCTATATGATGAATGGTCT---------------------------------------TGCT-----GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400000000004000000
..........................................................................................................................................................................................................................................................................CGCGTG--ATCATT---------GAAGAAA---TGTG--CT----G.............................................................................................................................................................................................................................................................................2612.00200000000002000000
.....................................................................................................................................................................................................................................................................CGC--CGCGTG--ATCATT---------GAAGAAA---TG........................................................................................................................................................................................................................................................................................2412.00200000000002000000
..............................................ATCTATATGATGAATGGTCT---------------------------------------TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCTGCTGCCTGCAGGAATCGGG...................2511.00100000000001000000
..............................................................................................................................................................................................................................................................................TG--ATCATT---------GAAGAAA---TGTG--CT----GATGTG........................................................................................................................................................................................................................................................................2711.00100000000001000000
....T-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
..............................................ATCTATATGATGAATGGTCT---------------------------------------TGCT-----GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
..............................................ATCTATATGATGAATGGTCT---------------------------------------TGCT-----GA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...............................................................................................................................TGAGTTCCGTTT---------------------------------------GGCTCG-------------GGC-T...........................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
....................................................................................................................TATT---TCAATGAGTTCCGTTT---------------------------------------GGCTCG-------------................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCAGGAATCGGAGG.................1911.00100000000001000000
......................................................................................................................................................................................................................................................................................TT---------GAAGAAA---TGTG--CT----GATGTGTGT---TT................................................................................................................................................................................................................................................................2611.00100000000001000000
..............................................................................................................................................................................................................................................................................................................G--CT----GATGTGTGT---TTTGCGCCTC........................................................................................................................................................................................................................................................2211.00100000000001000000
...........................................................................................................................................................................................................................................................................................................TGTG--CT----GATGTGTGT---TTTGCGCC..........................................................................................................................................................................................................................................................2311.00100000000001000000
.....................................................................................................................................................................................................................................................................................ATT---------GAAGAAA---TGTG--CT----GATG..........................................................................................................................................................................................................................................................................2011.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAGGAATCGGAGGCC...............1911.00101000000000000000
....................................................................................................................................TCCGTTT---------------------------------------GGCTCG-------------GGC-TTGATG......................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCTGCTGCCTGCAGGAATCGGG...................2711.00100100000000000000
..................................................................................................................................GTTCCGTTT---------------------------------------GGCTCG-------------GGC-T...........................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAATCGGAGGCCACGCGTC........2211.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGCTGCCTGCAGGAATCGGAGGCC...............2811.00100100000000000000
....T-----------------------CTGA--A----------GATCTATATGATGAATGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.............................................................................................................................................................................................................TGG---ATGCTTCAAAGCC.....................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
..............................................ATCTATATGATGAATGGTCT---------------------------------------TGCT-----GCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
..............................................ATCTATATGATGAATGGTCT---------------------------------------TGCT-----G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................CGCCTCGGAC--AAATA.............................................................................................................................................................................................................................................1560.17100000000100000000
droSec2
A-CAT-----------------------CTGA--A----------GATCTATATGATGAATGGTCT---------------------------------------TGCT-----GCTATT---TTAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GGC-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCTTAGCAGGCCACCTTCGACC--ACACGC--CGCGTG--ATCATT---------GAAAAAA---TGTG--CT----GATGTGTGT---TTTGCGCCTCGGAC--AAATCATTC-CC----A----AA----CTACTCGAGTGTGCCCTCATGTCT--------AAAAAATAT---------T----------------------------------------------------------TAATT-------AG----TTT---TTTCT--TC-----------TATATTTTGCAGTACTGTTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGACGAGTGAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCCTGCAGGAATCGGA...................2111.0010100
droYak3
----------------------------CTGA--A----------GATCTATATGATGAATGGTCA---------------------------------------TGCT-----GCTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTTG-------------GGG-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATC-------------TCCGACC--ACACGC--CGCGTG--ATCACTGAAATCATTGAAAAAA---TGTG--CTGTGTGATGTGTGT---TTTGCGCCTT------AAATCACTC-CC----A----AT----CTACTCGAGTG--CCCCCATGTCT--------AATTAATAT---------T----------------------------------------------------------TTTTTTTTT-T-TG----TAT---TTTCT--AT-----------TCTATTTTGCAGTACTGCTCGCCTGCTGTCTGCAGGAATCGGAGGCCACGCGACGTGTGAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCTCGCCTGCTGTCTGCA............................2311.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGCAGGAATCGGAGGCCACGC...........2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGAATCGGAGGCCACGCGACGTGT....2911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGGAGGCCACGCGACGTGTG...2411.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCAGGAATCGGAGGC................1911.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAATCGGAGGCCACGCGACGTGT....2611.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGCTCGCCTGCTGT.................................1811.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCAGGAATCGGAGGC................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCACGCGACGTGTGAAC2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGGAGGCCACGCGACGTGT....2311.00101000000000
..............................................................................................................................................................................................................................................................................................ATTGAAAAAA---TGTG--CTGTGTGATGT.........................................................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGCCTGCTGTCTGCAGGA.........................2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGCAGGAATCGGAGGC................2111.00100000010000
droEre2
G-CGT-----------------------TGGA--A----------GATCTACATGATGAATGGTCT---------------------------------------TGCT-----GCTATT---TCAATGAGTTCCGTTT---------------------------------------GGCTT--------------GGT-TTGATGG---ATGCTTCAAAGCCAATGCCGCAATCGTAGTGGGCCACCTTCGACC--ACACGC--CGCGTG--ATCACT---------GAAAAAA---TGTG--CT----GATTTGTGT---TTTGC---------------------------------------TACTCGAGTG--CCCCCCTGTCT--------TACAAACAT---------T----------------------------------------------------------TAATT-------CC----AAT---TTTCT--AC-----------TCTACTTTGCAGTGCTGCTGGCCTGCTGCCTGCAGGAATCGGAGGCCACGCGCCGTGTGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATCGGAGGCCACGCGC.........2013.0031000200
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGCTGCCTGCAGGAATCGGAGGC................2712.0021000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGAATCGGAGGCCACGCGCCGTG.....2711.0011000000
.............................................................GGTCT---------------------------------------TGCT-----GCTATT---TCAATGAGTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...GT-----------------------TGGA--A----------GATCTACATGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGGAGGCCACGCGCCGTGT....2211.0011000000

Generated: 05/16/2015 at 09:13 PM