ID:

dvi_22017

 Coordinate:

scaffold_13052:1683054-1683204 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -14.5 -14.4

Flybase annnotation

CDS [Dvir\GJ18433-cds]; exon [dvir_GLEANR_31:6]; intron [Dvir\GJ18433-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGCATGAAGCAACGGGAACGTGAAAAACCAGAAATATTTGAATTGATCAGGTAATGTCTTGGGTTAAGCCCATTTGGCTGGTGCGGATATTCATACTGTTCTATGGATGTATATAGAAAAGGACGAGATTTTAAGGCTCTCTTTCATAAAATATCTAGATTTCTGTAGTCCGATATTGTGCGTGGACAAGCACAGATACCTTTATTTTTACCAATAGTTACCATTTCGCAACAGTAAAATGCTGCGTTATA
******************************************************************************************........(((((((......)))))))..(((.(((.........))))))(((((..((((((..((((.....)))).))))))....)))))..*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060655
9x160_testes_total
 SRR060654
160x9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060683
160_testes_total
 SRR060666
160_males_carcasses_total
 SRR060656
9x160_ovaries_total
 SRR060670
9_testes_total
 SRR060681
Argx9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 V047
embryo
 V053
head
 SRR060679
140x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 M027
male body
........................................................................................................................................................................TCCGATATTGTGCGTGGACA............................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ATATCTAGATTTCTGTAGTCC................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................TCATACTGTTCTATGGATGT............................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................TTGAATTGATCAGGTAATGTCC................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TTGAATTGATCAGGTAATGTCTTGGGT........................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCATACTGTTCTATGGATGTATATAGAA..................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AGGACGAGATTTTAAGGCTT................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TTGATCAGGTAATGTCTTGGGTTAAGC...................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CTGTAGTCCGATATTGTGCGT.................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TTTGAATTGATCAGGTAATGTCCTGTG............................................................................................................................................................................................ 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTTCTGTAGTCCGATATTGTGCGT.................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TTCTGTAGTCCGATATTGTGCGTGGA................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................AACGTGAAAAACCAGAAATATTTGAA................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TATCTAGATTTCTGTAGTCCGATAT........................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TTCTGTAGTCCGATATTGTGCGT.................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................AACGTGAAAAACCAGAAATATTTG................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................TCGGAAATTCATACTGTTCTCT................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................TAGATTTCTGTAGTCCGTA............................................................................. 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
CACATGAAGCAACTGGAAC........................................................................................................................................................................................................................................ 19 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TAAACCCATTTGGCTGGTT........................................................................................................................................................................ 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................CGGGAAATTCATACTGTTCT..................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................CAGGACATTCATACTGTTCT..................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................TTACTGTAGTTCGATATT.......................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................AGAATTTATCAGGTAAGGTC................................................................................................................................................................................................. 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................CGGATATGCAGACTGTCCT..................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................TAGGACATTCATACTGTTC...................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................ATTGTAATTCATCAGGTAA..................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

GCGTACTTCGTTGCCCTTGCACTTTTTGGTCTTTATAAACTTAACTAGTCCATTACAGAACCCAATTCGGGTAAACCGACCACGCCTATAAGTATGACAAGATACCTACATATATCTTTTCCTGCTCTAAAATTCCGAGAGAAAGTATTTTATAGATCTAAAGACATCAGGCTATAACACGCACCTGTTCGTGTCTATGGAAATAAAAATGGTTATCAATGGTAAAGCGTTGTCATTTTACGACGCAATAT
***************************************************************........(((((((......)))))))..(((.(((.........))))))(((((..((((((..((((.....)))).))))))....)))))..****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body		 SRR060671
9x160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 M061
embryo
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 V116
male body		 SRR060663
160_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 M028
head
 SRR060655
9x160_testes_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060688
160_ovaries_total
 V053
head
 SRR060679
140x9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR1106715
embryo_4-6h
 SRR1106722
embryo_10-12h
 SRR060675
140x9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR1106716
embryo_4-6h
 SRR1106730
embryo_16-30h
 SRR060658
140_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060676
9xArg_ovaries_total
 SRR1106729
mixed whole adult body
 SRR1106720
embryo_8-10h
 SRR1106724
embryo_12-14h
 SRR1106727
larvae
 SRR1106714
embryo_2-4h
....................................................................................................................TTTCCCAGCTCTAAAATTC.................................................................................................................... 19 2 2 33.50 67 9 6 3 6 8 4 2 3 3 3 3 5 4 1 2 0 2 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................GTTTCCCAGCTCTAAAATTC.................................................................................................................... 20 3 6 15.17 91 18 7 4 3 2 7 3 4 6 4 8 4 5 2 2 9 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0
....................................................................................................................TTTCCCAGCTCTAAAATTCG................................................................................................................... 20 3 6 14.67 88 21 8 0 3 1 7 9 4 4 4 3 0 0 6 0 3 3 0 1 3 0 0 0 0 0 0 3 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................TTCCCAGCTCTAAAATTC.................................................................................................................... 18 2 3 7.00 21 0 0 11 0 0 0 2 0 0 0 0 0 0 2 0 0 1 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCCCAGCTCTAAAATTCG................................................................................................................... 19 3 13 2.92 38 4 5 0 4 2 2 2 6 2 0 1 2 1 1 0 0 0 0 1 0 1 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATCAGGCTATAACACGCACCT................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TTTCCCAGCTCTAAAATT..................................................................................................................... 18 2 5 1.80 9 0 1 0 0 0 1 1 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCCCAGCTCTAAAATTCGGA................................................................................................................. 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGAGAAGGTATTTTATAGATCTAAAG........................................................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ATGTTTCCCAGCTCTAAAATTC.................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAAAATGGTTATCAATGGTAAAGCGT..................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CCAGCTCTAAAATTC.................................................................................................................... 15 1 3 1.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACCTGTTCGTGTCTATGGAAA................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CCTATTTTATAGATCTAAAGACA..................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CCATATATCTTTTCCTGCTCTAA......................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GGTTGCCCTTGCACT.................................................................................................................................................................................................................................... 15 1 9 0.56 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 1 0
.................................................................................................................ATGTTTCCCAGCTCTAAAATT..................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTTCCAGCTCTAAAATTCGTA................................................................................................................. 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TCCCAGCTCTAAAATTC.................................................................................................................... 17 2 6 0.33 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GGTGCCCTTGCACTT................................................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CACCTTTTCGTGTCTCGGGAA................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CCAGCTCTAAAATTCGTAGA............................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GGTGCCCTTGCACTATT................................................................................................................................................................................................................................. 17 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................GTTTCCAGCTCTAAAATTCG................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TATAATTATGAGAGAAAGTATT...................................................................................................... 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TTTCCCAGCTCTAAAATGC.................................................................................................................... 19 3 17 0.12 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CCCAGCTCTAAAATTC.................................................................................................................... 16 2 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGGAAGTAAGAATGGTTA.................................... 18 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CAATGGTAATGCGTTGCCT................ 19 3 16 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCCCAGCTCTAAAATT..................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................ATTCCCAGCTCTAAAATTC.................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ATGTTTCCCAGCTCTAAAA....................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13052:1683004-1683254 - dvi_22017 CGCATGAAGCAACGGGAA-CGTGAAAAACCAGAAATATTTGAATTGATCAGGTAATGTC----TTG-----GGTTAA--GCC--------C-----------------------------------ATTTGGCTGGTGCGGATATTCATACTGTT----CTATGGATGTATATAGAAA-------------------------------------------------------AGG-----------------------------------------ACGAGATTTTAAGGCTCTCTTTCATAAAATATCTAGA-----------T-TTCT--GT------AGTCCG------------------------ATATTGTGCGTGGACAAGCACAGATACCTTTAT-------------TTTTACCAATAGTTACCATTTCGCAACAGTAAAATGCTGCGTTATA
droMoj3 scaffold_6498:775930-776064 - CGGATGAAGCAACGCGAG-CGGGAAAAACCGGAAATATTTGAGTTGATCAGGTAACGCT----TTG-----AAATAG--ACCT-CA----T-----------------------------------TTGTGGCTGGTGCGGATATTCATATTTAT----CTATATGTGATGATTAAGA-------------------------------------------------------AAA-----------------------------------------CTGAAGTTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14822:732615-732718 + CGCATGAAACAGCGCGAG-CGCGAAAAGCCCGAAATTTTCGAATTGATCAGGTAACGAGTGTGTTAATTCGAAACAA--ACATGCGTGTGC-----------------------------------AGCTGGCTGGTGCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:764731-764971 + CGCATGAAGCATCGAGAA-CGAGAGAAGCCGGAAATCTTTGAATTGATCAGGTAAAGTG----ATG-----TCTAGACTTTA--------GAGAGACTGAAAACAGAAGCCAAGTTTCAGGTAAGGTGATGAGTAGAGACTACCAGA-----------------------------AGAAAAGGAGAC----TATGT------------GG-TA-TTTGT-TAA-------------G---------------------------------------------------------------TAAAAGCATTAAATTCGATATAGCAGATCT--ATTTGAAGGTGCGGATGCTTGGGTTACATGAATTATCTCAATGCTGTTT------------------------------------------------------------------------------AAA
droPer2 scaffold_103:59998-60097 + CGCATGAAGCAACGCGAG-CGAGAAAAGCCCGAAATTTTTGAGTTGATTAGGTAAGGTT----TTC-----CCTAAAAAATG--------G-----------------------------------TTTTGACTAGTGCGGATATGTGTAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12947:659718-659980 - CGTATGAAGCAACGAGAA-CGAGAAAAACCCGAAATTTTCGAATTAATTAGGTAACATA----AAT-----TAGAAA--GTTT-AA----T-----------------------------------TTTTAAATAGTGCTGGTAATTCTAGTTTC----CCA--------A---------------TGCA-T-TTT-ATTTTGGCACTTGGT-ATG-TTTTATT-------------GGGG-T-------------ATA-AATATGCATATAGTAAAGTCAAATCTTAATAT-----------------------------------------TT------ATGTTGAT---------------------------------GTTCAATTCAAAATAAGT----TC----CCTTTATAAGTGGCAATCACTTTTATCAAACGATAGTAAAATTTGCCATGGCA
droBip1 scf7180000394128:49886-49942 + CGAATGAAGCACCGAGAG-AGAGAGAAACCTGAAATTTTCGAATTAATTAGGTAACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302441:75120-75220 + TAAAA--------------------------------------------------TGTT----TTG-----CTTTGCGTTTT--------C-----------------------------------GGTTGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATG----------------------------------------------------------------------------CACAAAAAAAATTAAGCTCAA-------------GCTTAACAATATTTA---ACAAAGTCGGCTAAAATATTTTTGTATA
droFic1 scf7180000454040:484744-484996 - CGAATGAAGCAACGCGAG-CGAGAGAAGCCAGAAATTTTCGAGTTGATTAGGTAATATT----CAT-----TTAAAACCATT--------G-----------------------------------ACTTGACTAGTGCGGAAAATCGGCGGGATAA-----------------------------AGCT-T-GTA-CGTTTTCTGTTTTATAA-CCAAT-AAT-------------GGGCTTATTTACTTAGTGGGCT----------------------------------------------------------TTAA----------------------------AATAAAATAATTTGCAGTCTCAAAATTGTA---GATCAAGTTAAAATAAGT----TTGTTAGTATTTATTATGGTCAGAACCATT-----------GAAAA------CGAAGTA
droEle1 scf7180000491238:274466-274714 + AGAATGAAACAACGAGAG-CGAGAGAAACCAGAAATTTTTGAGTTGATCAGGTAATATT----ATG-----CTTAAAATATT--------G-----------------------------------ACTTGACTAGTGCGGATAAACGCAGCGATTAA----------------------------AACA-T-ATA-ATTTT-------------CCTTT-AAC-------------GGGGGT-------------ACTACATAGTT-------------------------------------------------CTATGCAAAA-CACTTGAT------TTGCCTATATTAACATGTTATGCAGTCTC-AAATCGTACACGATAAAACACAAACAAGTTTGTTAGCTAGTTTTGTAAGCGGCCAAAAC---------------------------------
droRho1 scf7180000770477:37872-38095 + CGAATGAAGCAGCGAGAG-CGAGAGAAACCAGAGATTTTTGAGTTGATTAGGTAATATT----TTA-----ATTCAAATATT--------G-----------------------------------ACTTGACTAGTGCGGATAATCGCAGCGATATA----------------------------AACA-T-ATA-AATTTTCACTTTTA-AA-CCATT-AAT-------------GGGGGT-------------ACTTCACAATT-------------------------------------------------ATATGCACAA-CAAT-------------------------TGATATGCAGCCCTTAAATCTTACATAATACAATAAAATTAAGT----TAGTTAGTCTTG-----------------------------------------------
droBia1 scf7180000301495:853817-854045 - CGAATGAAACAACGTGAG-CGGGAAAAGCCAGAAATATTCGAGTTGATAAGGTAATATT----ATA-----TTCAAGATATA--------G-----------------------------------ACTTGACTAGTACCTATTAGCGCAGCT---------------------------------------TATTT------------TT-TA-CCTTT-TAT-------------GGGGAT-------------A-TACACACTT-------------------------------------------------ATAAACATAA-CTCTT-AT------ATGCCGATATTGATATAATATGCAGCCTCCAAATCTATCATAATAAAGTAAAAATTAGT----TAGCTAGGTTATTAAGCGGA---------------------------------------
droTak1 scf7180000415156:92822-93067 - CGAATGAAGCAACGTGAA-CGAGAGAAACCAGAAATATTCGAATTGATTAGGTAACATT----ATA-----TTTACATTTTT--------G-----------------------------------ACTTGACTAGTGCCTATGATA-CAACTATA--------GGCACTAA------------ACAGTT-T-ATA-ATTTTTGAATTTTTAAA-CCTTT-AAT-------------GGGGAT-------------T-T--ACACTT-------------------------------------------------CTTAACATAA-CACT--AT------ATGCCGATATTGGTATGATATGCTGCCTCCAAATCTAACATAATACAATAAAAATAAGT----TAGTTAGTTCTT-----------------------------------------------
droEug1 scf7180000408984:318206-318390 + CGCATGAAGCAACGTGAG-CGGGAGAAGCCCGAGATATTCGAGTTGATTAGGTAATATT----ATA-----T-CAATATATC--------G-----------------------------------ATTTGACTACTGCGTATAAACGCAGCGATAAATCTATATGCAATAA---------------------------------------------------TGTAATCTTTAAACGGGGGT-------------GCT----------------------------------------------------------------------------------------------------------------------------------TAAAAATAAGA----TTATTAGTTTTATAAGTGGCCAGAACTATT--------------------------AGA
dm3 chr4:903537-903636 - CGTATGAAGCAACGTGAA-CGAGAGAAGCCTGAAATTTTTGAGTTGATTAGGTAATATT----ACA-----TTCAATAGTAA--------A-----------------------------------AGTTGACTAGTGCGTATAATTACAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 4:705289-705388 - CGTATGAAGCAACGTGAA-CGAGAGAAGCCGGAAATTTTTGAGTTGATTAGGTAATATT----ACA-----TTCAATAGTAC--------A-----------------------------------AGTTGACTAGAGCGTATAATTACAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_30:609989-610089 - CGTATGAAGCAACGTGAACCGAGAGAAGCCGGAAATTTTTGAGTTGATTAGGTAATATT----ACA-----TTCAATAGTAC--------A-----------------------------------AGTTGACTAGTGCGTATAATTACAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 4:970276-970332 - CGAATGAAGCAACGTGAA-CGGGAGAAGCCTGAAATTTTTGAGTTGATTAGGTAATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4512:368687-368920 + CGAATGAAGCAACGAGAA-CGAGAGAAGCCGGAAATTTTCGAGTTAATTAGGTAACATT----CAA-----TTCCATATAAC--------G-----------------------------------AGTTGACTAGTGCGTATAATCACAGCGATAAA----------------------------GTCGT-TATTTTTTTTTTAATTTAAA-AAC-TTTGAGT-------------GGGG-T-------------AAC----AATT-------------------TAAT--------------------------CTAAACGAAA-TTAT--AT------TTG-----------ATGTTATGCAAACTCCTAATCTTACATATT------AAAATAAGT----CAGCTAGTTTGGTAAGCGGC---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CGCATGAAGCAACGGGAA-CGTGAAAAACCAGAAATATTTGAATTGATCAGGTAATGTC----TTG-----GGTTAA--GCC--------C-----------------------------------ATTTGGCTGGTGCGGATATTCATACTGTT----CTATGGATGTATATAGAAA-------------------------------------------------------AGG-----------------------------------------ACGAGATTTTAAGGCTCTCTTTCATAAAATATCTAGA-----------T-TTCT--GT------AGTCCG------------------------ATATTGTGCGTGGACAAGCACAGATACCTTTAT-------------TTTTACCAATAGTTACCATTTCGCAACAGTAAAATGCTGCGTTATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................TCCG------------------------ATATTGTGCGTGGACA............................................................................2012.002000000000000000000000000000000000200000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ATATCTAGA-----------T-TTCT--GT------AGTCC.....................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................TCATACTGTT----CTATGGATGT......................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
......................................TTGAATTGATCAGGTAATGTC----C...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
......................................TTGAATTGATCAGGTAATGTC----TTG-----GGT.....................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TCATACTGTT----CTATGGATGTATATAGAA..............................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................AGG-----------------------------------------ACGAGATTTTAAGGCTT.........................................................................................................................................................................2011.001000010000000000000000000000000000000000000000000000000000000000
...........................................TTGATCAGGTAATGTC----TTG-----GGTTAA--GC..............................................................................................................................................................................................................................................................................................................................................................................................2711.001000001000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CT--GT------AGTCCG------------------------ATATTGTGCGT.................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................T-TTCT--GT------AGTCCG------------------------ATATTGTGCGT.................................................................................2411.001000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTCT--GT------AGTCCG------------------------ATATTGTGCGTGGA..............................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
................AA-CGTGAAAAACCAGAAATATTTGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TATCTAGA-----------T-TTCT--GT------AGTCCG------------------------ATAT........................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTCT--GT------AGTCCG------------------------ATATTGTGCGT.................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
................AA-CGTGAAAAACCAGAAATATTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TAGA-----------T-TTCT--GT------AGTCCG------------------------TA..........................................................................................1940.251000000000000000000000000000001000000000000000000000000000000000
droMoj3
CGGATGAAGCAACGCGAG-CGGGAAAAACCGGAAATATTTGAGTTGATCAGGTAACGCT----TTG-----AAATAG--ACCT-CA----T-----------------------------------TTGTGGCTGGTGCGGATATTCATATTTAT----CTATATGTGATGATTAAGA-------------------------------------------------------AAA-----------------------------------------CTGAAGTTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................ATATGTGATGATTAAGA-------------------------------------------------------AAA-----------------------------------------CTGAAG....................................................................................................................................................................................2619.009700200
....................................................................................................................................................................TGTGATGATTAAGA-------------------------------------------------------AAA-----------------------------------------CTGAAG....................................................................................................................................................................................2311.001000010
.........CAACGCGAG-CGGGAAAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droGri2
CGCATGAAACAGCGCGAG-CGCGAAAAGCCCGAAATTTTCGAATTGATCAGGTAACGAGTGTGTTAATTCGAAACAA--ACATGCGTGTGC-----------------------------------AGCTGGCTGGTGCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CGCATGAAGCATCGAGAA-CGAGAGAAGCCGGAAATCTTTGAATTGATCAGGTAAAGTG----ATG-----TCTAGACTTTA--------GAGAGACTGAAAACAGAAGCCAAGTTTCAGGTAAGGTGATGAGTAGAGACTACCAGA-----------------------------AGAAAAGGAGAC----TATGT------------GG-TA-TTTGT-TAA-------------G---------------------------------------------------------------TAAAAGCATTAAATTCGATATAGCAGATCT--ATTTGAAGGTGCGGATGCTTGGGTTACATGAATTATCTCAATGCTGTTT------------------------------------------------------------------------------AAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droPer2
CGCATGAAGCAACGCGAG-CGAGAAAAGCCCGAAATTTTTGAGTTGATTAGGTAAGGTT----TTC-----CCTAAAAAATG--------G-----------------------------------TTTTGACTAGTGCGGATATGTGTAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CGTATGAAGCAACGAGAA-CGAGAAAAACCCGAAATTTTCGAATTAATTAGGTAACATA----AAT-----TAGAAA--GTTT-AA----T-----------------------------------TTTTAAATAGTGCTGGTAATTCTAGTTTC----CCA--------A---------------TGCA-T-TTT-ATTTTGGCACTTGGT-ATG-TTTTATT-------------GGGG-T-------------ATA-AATATGCATATAGTAAAGTCAAATCTTAATAT-----------------------------------------TT------ATGTTGAT---------------------------------GTTCAATTCAAAATAAGT----TC----CCTTTATAAGTGGCAATCACTTTTATCAAACGATAGTAAAATTTGCCATGGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CGAATGAAGCACCGAGAG-AGAGAGAAACCTGAAATTTTCGAATTAATTAGGTAACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TAAAA--------------------------------------------------TGTT----TTG-----CTTTGCGTTTT--------C-----------------------------------GGTTGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATG----------------------------------------------------------------------------CACAAAAAAAATTAAGCTCAA-------------GCTTAACAATATTTA---ACAAAGTCGGCTAAAATATTTTTGTATASizeHit CountTotal NormTotal
No Reads
droFic1
CGAATGAAGCAACGCGAG-CGAGAGAAGCCAGAAATTTTCGAGTTGATTAGGTAATATT----CAT-----TTAAAACCATT--------G-----------------------------------ACTTGACTAGTGCGGAAAATCGGCGGGATAA-----------------------------AGCT-T-GTA-CGTTTTCTGTTTTATAA-CCAAT-AAT-------------GGGCTTATTTACTTAGTGGGCT----------------------------------------------------------TTAA----------------------------AATAAAATAATTTGCAGTCTCAAAATTGTA---GATCAAGTTAAAATAAGT----TTGTTAGTATTTATTATGGTCAGAACCATT-----------GAAAA------CGAAGTASizeHit CountTotal NormTotal
No Reads
droEle1
AGAATGAAACAACGAGAG-CGAGAGAAACCAGAAATTTTTGAGTTGATCAGGTAATATT----ATG-----CTTAAAATATT--------G-----------------------------------ACTTGACTAGTGCGGATAAACGCAGCGATTAA----------------------------AACA-T-ATA-ATTTT-------------CCTTT-AAC-------------GGGGGT-------------ACTACATAGTT-------------------------------------------------CTATGCAAAA-CACTTGAT------TTGCCTATATTAACATGTTATGCAGTCTC-AAATCGTACACGATAAAACACAAACAAGTTTGTTAGCTAGTTTTGTAAGCGGCCAAAAC---------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CGAATGAAGCAGCGAGAG-CGAGAGAAACCAGAGATTTTTGAGTTGATTAGGTAATATT----TTA-----ATTCAAATATT--------G-----------------------------------ACTTGACTAGTGCGGATAATCGCAGCGATATA----------------------------AACA-T-ATA-AATTTTCACTTTTA-AA-CCATT-AAT-------------GGGGGT-------------ACTTCACAATT-------------------------------------------------ATATGCACAA-CAAT-------------------------TGATATGCAGCCCTTAAATCTTACATAATACAATAAAATTAAGT----TAGTTAGTCTTG-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CGAATGAAACAACGTGAG-CGGGAAAAGCCAGAAATATTCGAGTTGATAAGGTAATATT----ATA-----TTCAAGATATA--------G-----------------------------------ACTTGACTAGTACCTATTAGCGCAGCT---------------------------------------TATTT------------TT-TA-CCTTT-TAT-------------GGGGAT-------------A-TACACACTT-------------------------------------------------ATAAACATAA-CTCTT-AT------ATGCCGATATTGATATAATATGCAGCCTCCAAATCTATCATAATAAAGTAAAAATTAGT----TAGCTAGGTTATTAAGCGGA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGAATGAAGCAACGTGAA-CGAGAGAAACCAGAAATATTCGAATTGATTAGGTAACATT----ATA-----TTTACATTTTT--------G-----------------------------------ACTTGACTAGTGCCTATGATA-CAACTATA--------GGCACTAA------------ACAGTT-T-ATA-ATTTTTGAATTTTTAAA-CCTTT-AAT-------------GGGGAT-------------T-T--ACACTT-------------------------------------------------CTTAACATAA-CACT--AT------ATGCCGATATTGGTATGATATGCTGCCTCCAAATCTAACATAATACAATAAAAATAAGT----TAGTTAGTTCTT-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CGCATGAAGCAACGTGAG-CGGGAGAAGCCCGAGATATTCGAGTTGATTAGGTAATATT----ATA-----T-CAATATATC--------G-----------------------------------ATTTGACTACTGCGTATAAACGCAGCGATAAATCTATATGCAATAA---------------------------------------------------TGTAATCTTTAAACGGGGGT-------------GCT----------------------------------------------------------------------------------------------------------------------------------TAAAAATAAGA----TTATTAGTTTTATAAGTGGCCAGAACTATT--------------------------AGASizeHit CountTotal NormTotal
No Reads
dm3
CGTATGAAGCAACGTGAA-CGAGAGAAGCCTGAAATTTTTGAGTTGATTAGGTAATATT----ACA-----TTCAATAGTAA--------A-----------------------------------AGTTGACTAGTGCGTATAATTACAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....TGAAGCAACGTGAA-CGAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000020
......AAGCAACGTGAA-CGAGAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010
.....................AGAGAAGCCTGAAATTTTTGAGTTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CTAGTGCGTATAATTACAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................AATTTTTGAGTTGATTAGGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATGAAGCAACGTGAA-CGAGAGAAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAATTTTTGAGTTGATTAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000
.........................AAGCCTGAAATTTTTGAGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......AGCAACGTGAA-CGAGAGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000010
.........CAACGTGAA-CGAGAGAAGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000
........................GAAGCCTGAAATTTTTGAGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTATGAAGCAACGTGAA-CGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................AGTTGACTAGTGCGTATAATT............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................AATTTTTGAGTTGATTAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........ACGTGAA-CGAGAGAAGCCTGAAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGAGAGAAGCCTGAAATTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................ATTTTTGAGTTGATTAGGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................AATTTTTGAGTTGATTAG............................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................AGAAGCCTGAAATTTTTGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
................AA-CGAGAGAAGCCTGAAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAGCCTGAAATTTTTGAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................GAGAAGCCTGAAATTTTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................TAGTAA--------A-----------------------------------AGTTGACTAGTGCGTATAAT.............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................A-----------------------------------AGTTGACTAGTGCGTATAATT............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................TTTGAGTTGATTAGGTAATATT----................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............TGAA-CGAGAGAAGCCTGAAATTTTTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................GTTGACTAGTGCGTATAATTA...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........CAACGTGAA-CGAGAGAAGCCTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGTATGAAGCAACGTGAA-CGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................GACTAGTGCGTATAATTACAG........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....TGAAGCAACGTGAA-CGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......AAGCAACGTGAA-CGAGAGAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................GAAGCCTGAAATTTTTGAGTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AA-CGAGAGAAGCCTGAAATTTTTGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................AA--------A-----------------------------------AGTTGACTAGTGCGTATA...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................TGAAATTTTTGAGTTGATTAGGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATGAAGCAACGTGAA-CGAGAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCCTGAAATTTTTGAGTTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..........AACGTGAA-CGAGAGAAGCCTGAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTGAGTTGATTAGGTAATATT----................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTATGAAGCAACGTGAA-CG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........AACGTGAA-CGAGAGAAGCCTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................TTTTGAGTTGATTAGGTAATATT----A...............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAAGCAACGTGAA-CGAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
....TGAAGCAACGTGAA-CGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
............CGTGAA-CGAGAGAAGCCTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGAAGCAACGTGAA-CGAGAGAAGCCTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGAAGCAACGTGAA-CGAGAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCAACGTGAA-CGAGAGAAGCCTGAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGTTGACTAGTGCGTATAATTACAGT.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...ATGAAGCAACGTGAA-CGAGAGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................GAGAAGCCTGAAATTTTTGAGTTGA................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGCCTGAAATTTTTGAGTTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............TGAA-CGAGAGAAGCCTGAAATTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGAAGCCTGAAATTTTTGAGTTGATTAG............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................AGAGAAGCCTGAAATTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....TGAAGCAACGTGAA-CGAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........ACGTGAA-CGAGAGAAGCCTGAAATTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCTGAAATTTTTGAGTTGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
......................GAGAAGCCTGAAATTTTTGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACGTGAA-CGAGAGAAGCCTGAAATTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACGTGAA-CGAGAGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..TATGAAGCAACGTGAA-CGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..TATGAAGCAACGTGAA-CGAGAGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...ATGAAGCAACGTGAA-CGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....GAAGCAACGTGAA-CGAGAGAAGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......AGCAACGTGAA-CGAGAGAAGCCTGAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGTGAA-CGAGAGAAGCCTGAAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACGTGAA-CGAGAGAAGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGAAATTTTTGAGTTGATTAG............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................TTTTGAGTTGATTAGGTAATATT----AC..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........AACGTGAA-CGAGAGAAGCCTGAAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTGACTAGTGCGTATAATT............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....TGAAGCAACGTGAA-CGAGAGAAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....TGAAGCAACGTGAA-CGAGAGAAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................A--------A-----------------------------------AGTTGACTAGTGCGTATAAT.............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............GTGAA-CGAGAGAAGCCTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................A-CGAGAGAAGCCTGAAATTTTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................A--------A-----------------------------------AGTTGACTAGTGCGTATAA..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................AAGCCTGAAATTTTTGAGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
droSim2
CGTATGAAGCAACGTGAA-CGAGAGAAGCCGGAAATTTTTGAGTTGATTAGGTAATATT----ACA-----TTCAATAGTAC--------A-----------------------------------AGTTGACTAGAGCGTATAATTACAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..TATGAAGCAACGTGAA-CGAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
...ATGAAGCAACGTGAA-CGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
droSec2
CGTATGAAGCAACGTGAACCGAGAGAAGCCGGAAATTTTTGAGTTGATTAGGTAATATT----ACA-----TTCAATAGTAC--------A-----------------------------------AGTTGACTAGTGCGTATAATTACAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................CCGGAAATTTTTGAGTTGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
droYak3
CGAATGAAGCAACGTGAA-CGGGAGAAGCCTGAAATTTTTGAGTTGATTAGGTAATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.GAATGAAGCAACGTGAA-CGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
CGAATGAAGCAACGAGAA-CGAGAGAAGCCGGAAATTTTCGAGTTAATTAGGTAACATT----CAA-----TTCCATATAAC--------G-----------------------------------AGTTGACTAGTGCGTATAATCACAGCGATAAA----------------------------GTCGT-TATTTTTTTTTTAATTTAAA-AAC-TTTGAGT-------------GGGG-T-------------AAC----AATT-------------------TAAT--------------------------CTAAACGAAA-TTAT--AT------TTG-----------ATGTTATGCAAACTCCTAATCTTACATATT------AAAATAAGT----CAGCTAGTTTGGTAAGCGGC---------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................TAATTTAAA-AAC-TTTGAGT-------------GGGG-T-------------...............................................................................................................................................................................................................2411.0011000000

Generated: 05/16/2015 at 09:35 PM