ID:

dvi_21655

 Coordinate:

scaffold_13052:1288162-1288312 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.4 -8.2 -8.1

Flybase annnotation

exon [dvir_GLEANR_146:1]; CDS [Dvir\GJ14595-cds]; intron [Dvir\GJ14595-in]

Repeatable elements

NameClassFamilyStrand
Gypsy6-I_Dmoj-intLTRGypsy+
Galileo_DMDNAP+
mature
star
  1. scaffold_12472:510412-510427 +
  2. scaffold_12726:1138620-1138635 +
  3. scaffold_12855:4013153-4013168 +
  4. scaffold_12875:12380205-12380220 +
  5. scaffold_12875:15427014-15427029 +
  6. scaffold_12875:18080882-18080897 +
  7. scaffold_12928:5720526-5720541 +
  8. scaffold_12954:1879767-1879782 +
  9. scaffold_12963:5354658-5354673 +
  10. scaffold_12970:10277363-10277378 +
  11. scaffold_13042:2986049-2986064 +
  12. scaffold_13047:704474-704489 +
  13. scaffold_13047:1053440-1053455 +
  14. scaffold_13047:2625433-2625448 +
  15. scaffold_13049:6937093-6937108 +
  16. scaffold_13049:13656804-13656819 +
  17. scaffold_13049:14402007-14402022 +
  18. scaffold_13052:1167883-1167898 +
  19. dvi_21655  scaffold_13052:1288283-1288298 +
  20. scaffold_13052:1661577-1661592 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTCGAGTTCTACGAGTTGAAGTCCACGCGCTCTCTACGAACCGACGAAATGTAAGTACTAGTAACATGTCTTCGTGGAGTTGAACAAGCATGTATGTATGTATGCCATTGTCCACATTAATAAATATGCACATACATACATATGCAGGCACGCTTTAGCATTCAAAAATACATACATATGTACGTATCTATGTACATACCTGCACATGCAAGCGTAGGTATTCGACGACGGTTATATTTTCCGCATGATTA
****************************************************************************************************...............................((((.((((((((...((........))...............)))))))).))))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060663
160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 V116
male body		 V047
embryo
 V053
head
 SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060655
9x160_testes_total
 SRR1106717
embryo_6-8h
..........................GCGCTCTCTACGAACCGACGA............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................TATGCCATTGTCCACATTAAT.................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................CTCTACGAACCGACGAAATGTA...................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CGAGTTGAAGTCCACGCGCTCTCT........................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............GTTGAAGTCCACGCGCTCTCTACGAA................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GTTCTACGAGTTGAAGTCCA.................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GAGTTGAAGTCCACGCGCTCTCTACGAA................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CTACGAGTTGAAGTCCACGC............................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GAGTTCTACGAGTTGAAGTCCACGC............................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GTTGAAGTCCACGCGCTCTCTAC...................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GTGGAGCCGAACAAGTATGTAT............................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CCACGCTCTAGCATTCAAG..................................................................................... 19 3 16 0.25 4 0 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 0 0
......................................................................................................................................CTTACATATCCAGGCATGCT................................................................................................. 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................TGAACAAACCTGGATGTAT........................................................................................................................................................ 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCTACTACGGTTATGTTTTC.......... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................ATGTAAATACCTGTAGATGCA......................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................TGAACAATCCTGGATGTAT........................................................................................................................................................ 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................TGAACAAACCTGTATGTATC....................................................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................CTCCGAACCGCCGAAA.......................................................................................................................................................................................................... 16 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................GTATCTATGACTGCCATTGT............................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................ATGGATGTATGCCAATGT............................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................ATACATATGTACGTAT................................................................ 16 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CAGCTCAAGATGCTCAACTTCAGGTGCGCGAGAGATGCTTGGCTGCTTTACATTCATGATCATTGTACAGAAGCACCTCAACTTGTTCGTACATACATACATACGGTAACAGGTGTAATTATTTATACGTGTATGTATGTATACGTCCGTGCGAAATCGTAAGTTTTTATGTATGTATACATGCATAGATACATGTATGGACGTGTACGTTCGCATCCATAAGCTGCTGCCAATATAAAAGGCGTACTAAT
****************************************************************...............................((((.((((((((...((........))...............)))))))).))))**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 SRR060659
Argentina_testes_total
 SRR060674
9x140_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106730
embryo_16-30h
 V047
embryo
 V116
male body		 SRR060656
9x160_ovaries_total
 SRR060673
9_ovaries_total
 SRR060681
Argx9_testes_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
 SRR1106715
embryo_4-6h
...................TCAGGTGCGCGAGAGATGCTT................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........GCTCAACTTCAGGTGCGCGAGA.......................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GAAGCACCTCGGCTTGTTCGT................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........GATGCTCAACTTCAGGTG................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................TTCAGGTGGGCGAGGGAT....................................................................................................................................................................................................................... 18 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................ACTTCAGGTGCGCGAGAG......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................CAGGTGCGCGAGAGATGCTTG.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................GTGCGAAATGGTAAGTTT..................................................................................... 18 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................GTATGTATACATCCATAGATAGATGT....................................................... 26 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................GCAATCGTAAGTTTTTATGAGTG............................................................................ 23 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................AGTTTTAATGTAGGTATACA...................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................CGACCTCAACTTGTTCGTACC.............................................................................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................ATCCATCAGGTGCTG...................... 15 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13052:1288112-1288362 + dvi_21655 GTCGAGTTCTACGAGTTGAAGTC---CACGCGCTCTCTACGAACCGACGAAATGTAAGTACT-----AGTA-ACATG--------------TCTTCGTGGAG----------------TTGAACAAGCATGTATGTATGTATG---------------------------------CCATTGTCCACATTAATAAATATGCACATACATA--------------------------------------------------------------CATA----------------------------------------------------------------------------------------------------------------TGCAGGCACGCTTTAG--------------CATTCAAAAATACATACATATGT--AC----------------------------------------GTA------------------------TCTATGT--------AC------------------------------------------AT-----ACCTGCACAT------------------------------------------------GCAAGCG----------TAGGTATTCGA---CGACGGTTATAT-TT-------TCC--GCATGATTA
droMoj3 scaffold_6498:1614038-1614281 + GTCGAGTTCTATGAATTGAAGTC---TACGCGGTCTCTGCGAACAGACGAAATGTAAGTAACAATG-CCTAG----C-----------------------------------------------------------------------------------------------------ACTATAAGCATTAGTACATATATATGTACATATATAT-GTTAACAGTAGAAATT---------------------------------------------------------------------ATGAATAAG------------------------------------------------------------------------------------------------------------CCCTCAAAAACACATGTGTATGCATAAA--CATGCAC------------------------------ATAT------------------------GT-----------------------------------------------------------------------ACA--------------TATGTATATCTGTATGTACTTACA------TATATAATTA----------TGAGTGTGTTAAATT------TATATTTT-------TCT--ACCTGATTA
droGri2 scaffold_15203:4009627-4009822 - CGAAATGCTTATATGTAAAAT--------------------------------GTGTGG--------GAT---------------------------------------------------AATAAACATATATATATGCATA---------------------------------TACTTATACATATACATA----------TACATA----------------------------------------------------------------------------------------------TACATATACA-----------------------------TA------TACA---------------------------------------------------TATACATATACATATACATATACATATACATATA--------------------------------------------------------CATATACATATAC----ATATAC--------AT---------------------------------------------------ATA----------------------------------------CATATACATAT--AC----------------ATA------TACATATACATATACA-TA-------TAC--ATATACATA
droWil2 scf2_1100000004943:648977-649234 + GTCGAATTTTATGAATTAAAGTC---AACGCGCTCTTTACGGACCGACGAAATGTAAGTATA----ATGTA-GATGC---AT------------------------------------------ACT-----------------------------------------------------------------------------TACATATATAT-----------------------------------------------------------------------------------------------------------------------GTCAGTATTTG------TG-------------------------------------------------TACATACATAGATACAAATTGGAAAATAAACAA-AGGGTTAGAAAAAATATCTATACATATGTATATTTTTGTGTGTTACAAA---TATACTTACATATAATGATACTCATGTATGT--------AC------------------------------------------AT-----CCCT------------------------------------------------------------------------ATATAAATGTACAATGCGATATTAT-TT-------TGC--GCATGATTA
dp5 Unknown_group_139:2406-2654 + dps_1793 GTGGAATTTTATGAATTAAAATCATCAACGCGGTCTTTGCGATCTGACGAAATGTAAGTTGT----AAGAA-----------------------------------------------TTGAAAAATGG-G-------------------AGCTATCTGAAATAA--------CTAAAA-----------------------------------------------------------------TTATACAT---------------------------------------------------------------------ATGTATTTTCA---TTACTATTCA------TACA-----------------------------------------------TATGCACATGTATCCATGATCAAATATACATGTGTATGTGTATA---------------------------------------------------------------TAATGTATGT--------AC------------------------------------------AT-----CCATAACCACA--------------TATGCGTTAT------------------------C----------------GTATGTACATACATCACGA---TAT-TT-------GGT--GTATGATTA
droPer2 scaffold_51:410603-410851 - GTGGAATTTTATGAATTAAAATCATCAACGCGGTCTTTGCGATCTGACGAAATGTAAGTTGT----AAGAA-----------------------------------------------TTGAAAAATAG-G-------------------AGCTATCTGAAATAA--------CTAAAA-----------------------------------------------------------------TTATACAT---------------------------------------------------------------------ATGTATTTTCA---TTACTATTCA------TACA-----------------------------------------------TATGCACATGTATCCATGATCAAATATACATGTGTATGTGTATA---------------------------------------------------------------TAATGTATGT--------AC------------------------------------------AT-----CCATAACCACA--------------TATGCGTTAT------------------------C----------------GTATGTACATACATCACGA---TAT-TT-------GGT--GTATGATTA
droAna3 scaffold_13034:1950178-1950463 + GTCGAATTTTATGAATTAAAGTCATCCACTCGCTCTATTCGATCAGAAGAAGTGTAAGTATAAATA-TACAA----TCATAT--------------------ACACATATATATATAT----------------ATATATATATAGATTT------------------------------------------------------------------------------AA--ATATAACATAAAA---------------------------------------------------------TGCGT----CCATTGATATTTT-ATATTTGAGTCCG--------------------------------------------------------------------------------ATATCAATAATGCAATTTTATCTGAAAGAAAATGTAC--------------------------------------------------------------AT--------GCATTCGTTTATTGGTTTATTTATGAAAATCGA------------------------CTTTA------------------------TA------------------TGTATACAT------------ATGAACACATTCAACACGATATTAT-TTGATA---TAT--GTATGATTA
droBip1 scf7180000391563:15959-16230 - GTCGAATTTTACGAGTTAAAGTCAT---CTCGTTCTATTCGATCAGACGAAGTGTGAGTACA----TACAA-AC----ATATATTTACATGAACCAA------------------------CATAAATATCTATGTATGTATAT--------------------CATACATA--------TTTTTACATT---------GAACATTT---------------------AA--ATACAA------------------------------------------------------------------------CTCAAAATTA---ATAATTTTA--------------------------------------------------------------------------------------------------------------AAAGAAAATTTAC--------------------------------------------------------------AT--------A--------------TTTA-TTATGAACACAGGCTACATAGTACATACTACATGT-TACATA------------------------TGTATA--------------T--AAAT--------------ACATACACAATCAACACGATATTAT-TT-------GAT--ATATGATTA
droKik1 scf7180000302413:226099-226391 + ATGGAATTTTATGAGCTAAAATCATCTACTCGGTCTTTACGATCCGATGAAATGTAAGTACATACA-CATAT----ACATAT--------------------ACATACATATGTACCT----------------CCATTTCTGCGAAACTGATAT--------------------------------------------------------------------------------TAACATTAAGTGTACATATGTATGTATGT---A----CATT-----------------------------------------TAGGGTATATTTTAATGAA--------------------------------------------------------------------------------------CAGAAATACATATATGTATGTACA----------------------------------------TATGTACAT----------------------AC--------ATATACAGACATTGAGCTGTAAGTAATAAGAGT------------------------ATATA------------------------TGTATG--------------T--ATGT---ATGTACA--T-GTGCGTGCTAGCAT-----CATTAT-TT-------GAT--GTATGATTA
droFic1 scf7180000453435:24554-24780 + ATGGAATTCTACGAATTGAAATCATCTACTCGCTGTTTACGATCTGATGAAATGTAAGTAGT----TTGAA-AAGGC-------------------------------------------------------------------------AGTTTTA----GAAAATA----TTTT-------------------------ATATACATATATACAGCTTACGATCCGAATT-------------------------------------------------------------------TCATATTAGTATACATATATACATATATTTTCAAGATCGGTGTACA------TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGAT--------AC---------------------------------------------------ACA----------------------------------------CATTT--------G----------------AATGTGTACAAGCATGATGATATTAT-TT-------GAA--GAGTGATTA
droEle1 scf7180000491278:2010003-2010222 + GTGGAATTCTACAAATTAAAGTCATCAACTCGGTGTTTACGATCTGATGAAATGTAAGTAAC----TTGTA-ATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATGTATATT--------CAATCTACGTTGTCAATGCGTAAGCGCATGTTAATTAATATTTTCATGATCGATATACG------TACA-----------------------------------------------TTTG----------TATAATGATA------------------------------------------------------------TA--------------------T----TTATAT--------AC---------------------------------------------------ATA----------------------------------------CAGTT--------G----------------AGTGTGTACAAGCATGATGATATTAT-TT-------GAT--GTATGATTA
droRho1 scf7180000776670:1561-1805 - GTGGAATTCTACAAATTAAAGTCGTCAACTCGCTGTTTACGATCTGATGAAATGTAAGTTTA----TTGTA-ACAGT---AT--------AGA-------------------------TTAAAAAAT----------------------------------------T---------------------------------------------------------------------------------------------AACTACATATGCACCAT--------CTATGTACGTTGTCAATGCGTAAGCGCATGTTAATTTATATTTTCATAACCGATATGTG------TACA-----------------------------------------------TATGTTTACAGATATA--TTAAAATA----------------------------------------------------------------------------------------CAT--------AC---------------------------------------------------ATA----------------------------------------CATAT--------A----------------TGTGTGTGCGGGCACGATGATATTAT-TT-------GAA--GTATGATTA
droBia1 scf7180000301412:18531-18772 + GTGGAGTTTTATGAATTAAAATCATCAACTCGCTGTTTACGGTCTGACGAAATGTAAGTATC----TTGTA-AAAGA-------------------------------------------------------------------------AATAT--------------------------------------------------------------------------------GAATGTACATTGTACATATGTATGTATATTAAAAACCAATTTA--------TAATATACTTTGGCAATACGTAAGCTCATGTTAATTTGTAATAT-------------------------------------------------------------------------------------A--------------------------------------------------------------------------------A------A------------TTACCAAA-------------------------------AACCA------------------------ATTTATATTATACTTTGGCAATGCGTAAG------------------------C----------------CCA----------------TGTTAA-TTAATAATAAGATCATGAAGTTA
droTak1 scf7180000412836:31082-31373 + ATGGAGTTCTATGAATTAAAGTCATCAACTCGCTGTTTACGGTCGGATGAAATGTAAGTAGC----TTGTA-ATTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACGTATGTATTTATATTGAAAACTAATGTATAATCTATGTATGTACGTTGTCAACGCGTAAGCGCATGTTAATTTATATCTTCATGATCGGTGTATC------TATA----TATGTA--TTATA----------------TTGAAGTACATGTGAACATACATGCATGCATACATACATACATAC--A------------------------------------------------------------T------A------------CATACATACGTAC------------------------------------------A--------------AT------------------------------------------------GTATCTG----------TACGTATGTAAGCTT------GATAT-TT-------GAA--GTATGATTA
droEug1 scf7180000408984:62581-62917 - GTGGAGTTCTATAAATTAAAGTCATCAACGCGCTGCTTACGGTCCGATGACATGTAAGTAGC----TTCTG-AAAGGCATAAATGTACATAAATTAAGAGAA----------------TTTATAAATTATATATGTATGTA-----------------------CATACATA----------TT--------------------TACATATA-----------------------------------------------------------------T--------TAATGTACGTTTTCTATGGGCAAGCTCATGGTTATTTTAATTTTTAAGATCAATATT---------------ACATACATAGTATATGTACATACATACATATGTATGTATTTCT----------GAAAGTACACCACTTTACATAC--CTA--TGCAC----------------------------------------ATA------------------------TGTATGT--------AC------------------------------------------AT-----ACATATGTAT------------------------------A--------------T--GT---------ATGC---ATGTGCACAAGCAT---GATATTAT-TT-------GAT--GTGTAATTA
dm3 chr4:1219749-1220021 + ATGGAGTTCTATGAATTGAAATCATCATCACGCTGTATACGGCATAATGAAATGTAAGTATC----TTGCA-AT---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATATA--------CAGTCAGCGTTGTCAATGCCTGAGCTTATGTTAATATTTATTTTAATGATCAGTATATG------TTCG-----------------------------------------------TATTGATATGAATGTATACTGAAATAAATAC--ATATA--------------------------------------------------------T------A------------TAATCAAAAGTAC------------------------------------------AT-----CCTT-TTCATT------------------------TGAACA--------------T--ACGT---ATGTACGCAT-GTGCGCAAAAGCTT------TATAT-TT-------GAA--GTATGATTA
droSim2 4:982270-982537 + dsi_22628 ATGGAATTCTATGAATTGAAATCATCATCACGCTGTTTACGGCATAATGAAATGTAAGTAGC----TTGCA-AT---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATCTA--------CAGTCAGCGTTGTCAATGCCTGAGCTAATGCTAATATTTATTTTCATGATCAGTATATG------TACG-----------------------------------------------TATAGATATGAATGTACACTGAAATAAATAT--G------------------------------------------------------------T------A------------TAATCAAACGTAC------------------------------------------AT-----CCTT-TTCATA------------------------TGAATA--------------T--ATGT---ATGTACGCAT-C-AAGCACAAGCTT------TATAT-TT-------GAA--GTATGATTA
droSec2 scaffold_40:245944-246212 + ATGGAGTTCTATGAATTGAAATCATCATCACGCTGTTTACGGCATAATGAAATGTAAGTAGT----TTGCA-AT---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATCTA--------CAGTCAGCGTTGTCAATGCCTGAGCTAATGCTAATATTTATTTTCATGATCAGTATATG------TACG-----------------------------------------------TATAGATATGAATGTACACTGAAATACATAC--G------------------------------------------------------------T------A------------TAATCAAACGTAC------------------------------------------AT-----CCTT-TTCATA------------------------TGAATA--------------T--ATGT---ATGTACGCAT-CTGCGCACAAGCTT------TATAT-TT-------GAA--GTATGATTA
droYak3 4:1324924-1325202 + ATGGAGTTCTATGAATTGAAATCTTCATCACGCTGTTTACGGCCTAATGAAATGTAAGTAGC----TTGTA-ATCAA----------------------------------------------------------------------------------ATCTAAAT-----------------------------------------------------------------------------------------ATGTATATTGCACATTAATTTC--------CAGTCAGCGTTGTCAATGCCTGAACTCATGTTAAAATGAATTTTCATGATCA-----TGTACGGATAAATATATATGTA--------------------------------------------A--TGTATATATTCAGATATGTATATGTATG--------------------------------------------------------T------A------------TAAGCAAATGTAC------------------------------------------AT-----CCTTTTTCATA------------------------TGAAGA--------------T--ATAT--A----------TGTGTGTACTAGCAT------CATAT-TT-------GAT--GTATGATTA
droEre2 scaffold_4512:20579-20851 - ATGGAGTTCTATGAATTAAAATCATCTTCACGCTGTTTACGGCCTAATGAAATGTAAGTAGC----TTGTA-ATCTA----------------------------------------------------------------------------------ATGTAAAT-----------------------------------------------------------------------------------------ATGTATATTGCACATTCATTTA--------CAGTCAGGGTTGACAATGCCTGAGTTCATGTTAAAATGTATTTTCATGATCGGTATACA------TAAG-----------------------------------------------TACATACATATGTGTATATCAATATATACATATGTATG--------------------------------------------------------T------T------------TAAACAAATGTAC------------------------------------------AT-----CCTTTTTCATA------------------------TGACGA--------------T--AT----------------GTGTGTACAAGCAT------CATAT-TT-------GAA--GTATGATTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTCGAGTTCTACGAGTTGAAGTC---CACGCGCTCTCTACGAACCGACGAAATGTAAGTACT-----AGTA-ACATG--------------TCTTCGTGGAG----------------TTGAACAAGCATGTATGTATGTATG---------------------------------CCATTGTCCACATTAATAAATATGCACATACATA--------------------------------------------------------------CATA----------------------------------------------------------------------------------------------------------------TGCAGGCACGCTTTAG--------------CATTCAAAAATACATACATATGT--AC----------------------------------------GTA------------------------TCTATGT--------AC------------------------------------------AT-----ACCTGCACAT------------------------------------------------GCAAGCG----------TAGGTATTCGA---CGACGGTTATAT-TT-------TCC--GCATGATTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................GCGCTCTCTACGAACCGACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................TATG---------------------------------CCATTGTCCACATTAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
..................................CTCTACGAACCGACGAAATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
...........CGAGTTGAAGTC---CACGCGCTCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
..............GTTGAAGTC---CACGCGCTCTCTACGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
.....GTTCTACGAGTTGAAGTC---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
............GAGTTGAAGTC---CACGCGCTCTCTACGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........CTACGAGTTGAAGTC---CACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
...GAGTTCTACGAGTTGAAGTC---CACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
..............GTTGAAGTC---CACGCGCTCTCTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATATGT--AC----------------------------------------GTA------------------------T..............................................................................................................................................................................................16200.051000000000000000000000000000000000000000000000100000000000000000
droMoj3
GTCGAGTTCTATGAATTGAAGTC---TACGCGGTCTCTGCGAACAGACGAAATGTAAGTAACAATG-CCTAG----C-----------------------------------------------------------------------------------------------------ACTATAAGCATTAGTACATATATATGTACATATATAT-GTTAACAGTAGAAATT---------------------------------------------------------------------ATGAATAAG------------------------------------------------------------------------------------------------------------CCCTCAAAAACACATGTGTATGCATAAA--CATGCAC------------------------------ATAT------------------------GT-----------------------------------------------------------------------ACA--------------TATGTATATCTGTATGTACTTACA------TATATAATTA----------TGAGTGTGTTAAATT------TATATTTT-------TCT--ACCTGATTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......TTCTATGAATTGAAGTC---TACGCGGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........TGAATTGAAGTC---TACGCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............AATTGAAGTC---TACGCGGTCTCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....................TC---TACGCGGTCTCTGCGAACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
........CTATGAATTGAAGTC---TACGCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
GTCGAGTTCTATGAATTGAAGTC---TACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...GAGTTCTATGAATTGAAGTC---TACGCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
......TTCTATGAATTGAAGTC---TACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
CGAAATGCTTATATGTAAAAT--------------------------------GTGTGG--------GAT---------------------------------------------------AATAAACATATATATATGCATA---------------------------------TACTTATACATATACATA----------TACATA----------------------------------------------------------------------------------------------TACATATACA-----------------------------TA------TACA---------------------------------------------------TATACATATACATATACATATACATATACATATA--------------------------------------------------------CATATACATATAC----ATATAC--------AT---------------------------------------------------ATA----------------------------------------CATATACATAT--AC----------------ATA------TACATATACATATACA-TA-------TAC--ATATACATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GTCGAATTTTATGAATTAAAGTC---AACGCGCTCTTTACGGACCGACGAAATGTAAGTATA----ATGTA-GATGC---AT------------------------------------------ACT-----------------------------------------------------------------------------TACATATATAT-----------------------------------------------------------------------------------------------------------------------GTCAGTATTTG------TG-------------------------------------------------TACATACATAGATACAAATTGGAAAATAAACAA-AGGGTTAGAAAAAATATCTATACATATGTATATTTTTGTGTGTTACAAA---TATACTTACATATAATGATACTCATGTATGT--------AC------------------------------------------AT-----CCCT------------------------------------------------------------------------ATATAAATGTACAATGCGATATTAT-TT-------TGC--GCATGATTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........TATGAATTAAAGTC---AACGCGCTCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...........TGAATTAAAGTC---AACGCGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....................................................................TA-GATGC---AT------------------------------------------ACT-----------------------------------------------------------------------------TACATATATAT-----------------------------------------------------------------------------------------------------------------------GTC..............................................................................................................................................................................................................................................................................................................................................................................2611.00100010
....................................................TGTAAGTATA----ATGTA-GATGC---AT------------------------------------------ACT-----------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
............GAATTAAAGTC---AACGCGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
....................GTC---AACGCGCTCTTTACGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGCGATATTAT-TT-------TG............1911.00100010
................TAAAGTC---AACGCGCTCTTTACGGACCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
dp5
GTGGAATTTTATGAATTAAAATCATCAACGCGGTCTTTGCGATCTGACGAAATGTAAGTTGT----AAGAA-----------------------------------------------TTGAAAAATGG-G-------------------AGCTATCTGAAATAA--------CTAAAA-----------------------------------------------------------------TTATACAT---------------------------------------------------------------------ATGTATTTTCA---TTACTATTCA------TACA-----------------------------------------------TATGCACATGTATCCATGATCAAATATACATGTGTATGTGTATA---------------------------------------------------------------TAATGTATGT--------AC------------------------------------------AT-----CCATAACCACA--------------TATGCGTTAT------------------------C----------------GTATGTACATACATCACGA---TAT-TT-------GGT--GTATGATTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................ATCATCAACGCGGTCTTTGCGATCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATA---------------------------------------------------------------TAATGTATGT--------AC------------------------------------------AT-----CC...........................................................................................................................2111.0010100000000
...............TTAAAATCATCAACGCGGTCTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
..................................................................AAGAA-----------------------------------------------TTGAAAAATGG-G-------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
...............................GGTCTTTGCGATCTGACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................TGAAAAATGG-G-------------------AGCTATCTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
GTGGAATTTTATGAATTAAAATCATCAACGCGGTCTTTGCGATCTGACGAAATGTAAGTTGT----AAGAA-----------------------------------------------TTGAAAAATAG-G-------------------AGCTATCTGAAATAA--------CTAAAA-----------------------------------------------------------------TTATACAT---------------------------------------------------------------------ATGTATTTTCA---TTACTATTCA------TACA-----------------------------------------------TATGCACATGTATCCATGATCAAATATACATGTGTATGTGTATA---------------------------------------------------------------TAATGTATGT--------AC------------------------------------------AT-----CCATAACCACA--------------TATGCGTTAT------------------------C----------------GTATGTACATACATCACGA---TAT-TT-------GGT--GTATGATTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................ATGTAAGTTGT----AAGAA-----------------------------------------------TT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................CTTTGCGATCTGACGAAATACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................TTTGCGATCTGACGAAATACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
droAna3
GTCGAATTTTATGAATTAAAGTCATCCACTCGCTCTATTCGATCAGAAGAAGTGTAAGTATAAATA-TACAA----TCATAT--------------------ACACATATATATATAT----------------ATATATATATAGATTT------------------------------------------------------------------------------AA--ATATAACATAAAA---------------------------------------------------------TGCGT----CCATTGATATTTT-ATATTTGAGTCCG--------------------------------------------------------------------------------ATATCAATAATGCAATTTTATCTGAAAGAAAATGTAC--------------------------------------------------------------AT--------GCATTCGTTTATTGGTTTATTTATGAAAATCGA------------------------CTTTA------------------------TA------------------TGTATACAT------------ATGAACACATTCAACACGATATTAT-TTGATA---TAT--GTATGATTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAATAATGCAATTTTAT........................................................................................................................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------ATGAACACATTCAACACGATATTAT-TT.....................2811.001100000
..............................CGCTCTATTCGATCAGAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................AGTCATCCACTCGCTCTATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
GTCGAATTTTACGAGTTAAAGTCAT---CTCGTTCTATTCGATCAGACGAAGTGTGAGTACA----TACAA-AC----ATATATTTACATGAACCAA------------------------CATAAATATCTATGTATGTATAT--------------------CATACATA--------TTTTTACATT---------GAACATTT---------------------AA--ATACAA------------------------------------------------------------------------CTCAAAATTA---ATAATTTTA--------------------------------------------------------------------------------------------------------------AAAGAAAATTTAC--------------------------------------------------------------AT--------A--------------TTTA-TTATGAACACAGGCTACATAGTACATACTACATGT-TACATA------------------------TGTATA--------------T--AAAT--------------ACATACACAATCAACACGATATTAT-TT-------GAT--ATATGATTASizeHit CountTotal NormTotal
No Reads
droKik1
ATGGAATTTTATGAGCTAAAATCATCTACTCGGTCTTTACGATCCGATGAAATGTAAGTACATACA-CATAT----ACATAT--------------------ACATACATATGTACCT----------------CCATTTCTGCGAAACTGATAT--------------------------------------------------------------------------------TAACATTAAGTGTACATATGTATGTATGT---A----CATT-----------------------------------------TAGGGTATATTTTAATGAA--------------------------------------------------------------------------------------CAGAAATACATATATGTATGTACA----------------------------------------TATGTACAT----------------------AC--------ATATACAGACATTGAGCTGTAAGTAATAAGAGT------------------------ATATA------------------------TGTATG--------------T--ATGT---ATGTACA--T-GTGCGTGCTAGCAT-----CATTAT-TT-------GAT--GTATGATTASizeHit CountTotal NormTotal
No Reads
droFic1
ATGGAATTCTACGAATTGAAATCATCTACTCGCTGTTTACGATCTGATGAAATGTAAGTAGT----TTGAA-AAGGC-------------------------------------------------------------------------AGTTTTA----GAAAATA----TTTT-------------------------ATATACATATATACAGCTTACGATCCGAATT-------------------------------------------------------------------TCATATTAGTATACATATATACATATATTTTCAAGATCGGTGTACA------TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGAT--------AC---------------------------------------------------ACA----------------------------------------CATTT--------G----------------AATGTGTACAAGCATGATGATATTAT-TT-------GAA--GAGTGATTASizeHit CountTotal NormTotal
No Reads
droEle1
GTGGAATTCTACAAATTAAAGTCATCAACTCGGTGTTTACGATCTGATGAAATGTAAGTAAC----TTGTA-ATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATGTATATT--------CAATCTACGTTGTCAATGCGTAAGCGCATGTTAATTAATATTTTCATGATCGATATACG------TACA-----------------------------------------------TTTG----------TATAATGATA------------------------------------------------------------TA--------------------T----TTATAT--------AC---------------------------------------------------ATA----------------------------------------CAGTT--------G----------------AGTGTGTACAAGCATGATGATATTAT-TT-------GAT--GTATGATTASizeHit CountTotal NormTotal
No Reads
droRho1
GTGGAATTCTACAAATTAAAGTCGTCAACTCGCTGTTTACGATCTGATGAAATGTAAGTTTA----TTGTA-ACAGT---AT--------AGA-------------------------TTAAAAAAT----------------------------------------T---------------------------------------------------------------------------------------------AACTACATATGCACCAT--------CTATGTACGTTGTCAATGCGTAAGCGCATGTTAATTTATATTTTCATAACCGATATGTG------TACA-----------------------------------------------TATGTTTACAGATATA--TTAAAATA----------------------------------------------------------------------------------------CAT--------AC---------------------------------------------------ATA----------------------------------------CATAT--------A----------------TGTGTGTGCGGGCACGATGATATTAT-TT-------GAA--GTATGATTASizeHit CountTotal NormTotal
No Reads
droBia1
GTGGAGTTTTATGAATTAAAATCATCAACTCGCTGTTTACGGTCTGACGAAATGTAAGTATC----TTGTA-AAAGA-------------------------------------------------------------------------AATAT--------------------------------------------------------------------------------GAATGTACATTGTACATATGTATGTATATTAAAAACCAATTTA--------TAATATACTTTGGCAATACGTAAGCTCATGTTAATTTGTAATAT-------------------------------------------------------------------------------------A--------------------------------------------------------------------------------A------A------------TTACCAAA-------------------------------AACCA------------------------ATTTATATTATACTTTGGCAATGCGTAAG------------------------C----------------CCA----------------TGTTAA-TTAATAATAAGATCATGAAGTTASizeHit CountTotal NormTotal
No Reads
droTak1
ATGGAGTTCTATGAATTAAAGTCATCAACTCGCTGTTTACGGTCGGATGAAATGTAAGTAGC----TTGTA-ATTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACGTATGTATTTATATTGAAAACTAATGTATAATCTATGTATGTACGTTGTCAACGCGTAAGCGCATGTTAATTTATATCTTCATGATCGGTGTATC------TATA----TATGTA--TTATA----------------TTGAAGTACATGTGAACATACATGCATGCATACATACATACATAC--A------------------------------------------------------------T------A------------CATACATACGTAC------------------------------------------A--------------AT------------------------------------------------GTATCTG----------TACGTATGTAAGCTT------GATAT-TT-------GAA--GTATGATTASizeHit CountTotal NormTotal
No Reads
droEug1
GTGGAGTTCTATAAATTAAAGTCATCAACGCGCTGCTTACGGTCCGATGACATGTAAGTAGC----TTCTG-AAAGGCATAAATGTACATAAATTAAGAGAA----------------TTTATAAATTATATATGTATGTA-----------------------CATACATA----------TT--------------------TACATATA-----------------------------------------------------------------T--------TAATGTACGTTTTCTATGGGCAAGCTCATGGTTATTTTAATTTTTAAGATCAATATT---------------ACATACATAGTATATGTACATACATACATATGTATGTATTTCT----------GAAAGTACACCACTTTACATAC--CTA--TGCAC----------------------------------------ATA------------------------TGTATGT--------AC------------------------------------------AT-----ACATATGTAT------------------------------A--------------T--GT---------ATGC---ATGTGCACAAGCAT---GATATTAT-TT-------GAT--GTGTAATTASizeHit CountTotal NormTotal
No Reads
dm3
ATGGAGTTCTATGAATTGAAATCATCATCACGCTGTATACGGCATAATGAAATGTAAGTATC----TTGCA-AT---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATATA--------CAGTCAGCGTTGTCAATGCCTGAGCTTATGTTAATATTTATTTTAATGATCAGTATATG------TTCG-----------------------------------------------TATTGATATGAATGTATACTGAAATAAATAC--ATATA--------------------------------------------------------T------A------------TAATCAAAAGTAC------------------------------------------AT-----CCTT-TTCATT------------------------TGAACA--------------T--ACGT---ATGTACGCAT-GTGCGCAAAAGCTT------TATAT-TT-------GAA--GTATGATTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................TAATGAAATGTAAGTATC----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGAAATCATCATCACGCTGTATACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TATGAATTGAAATCATCATCACGCTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
..................................................................................................................................................................................................................................................................................TATA--------CAGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001200000
...........................TCACGCTGTATACGGCATAATGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCACGCTGTATACGGCATAATGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CGTTGTCAATGCCTGAGCTTA.....................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCATCATCACGCTGTATACGGCATAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000012010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTGAAATCATCATCACGCTGTATACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TATA--------CAGTCAGCGTTGTCAAT................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................AAATCATCATCACGCTGTATACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCATCATCACGCTGTATACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTGAAATCATCATCACGCTGTATACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCTATGAATTGAAATCATCATCACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCATCATCACGCTGTATACGGCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCACGCTGTATACGGCATAATGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCATCACGCTGTATACGGCATAATGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATCATCATCACGCTGTATACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......TTCTATGAATTGAAATCATCATCACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000
...................................................................................................................................................................................................................................................................................................................................................TATATG------TTCG-----------------------------------------------TATTGATATGAATGTA.............................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTCTATGAATTGAAATCATCATCACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAATCATCATCACGCTGTATACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TAATATA--------CAGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................AATCATCATCACGCTGTATACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAT-GTGCGCAAAAGCTT------TA...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TCAATGCCTGAGCTTATGTTAATATT...........................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................A--------CAGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000
..................................................................................................................................................................................................................................................................................................................................TTTATTTTAATGATCAGTATATG------TT..............................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TAATATA--------CAGTCAGCGTTGTC...................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CAGTCAGCGTTGTCAATG...............................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCATCATCACGCTGTATACGGCATAAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CACGCTGTATACGGCATAATGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................A--------CAGTCAGCGTTGTCAAT................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATATA--------CAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................GTTGTCAATGCCTGAGCTTATGTT.................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GTTGTCAATGCCTGAGCTTA.....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
........................TCATCACGCTGTATACGGCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCAGTATATG------TTCG-----------------------------------------------TATTGA.......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AGTCAGCGTTGTCAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTAATATA--------CAGTCAGCGTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCAGTATATG------TTCG-----------------------------------------------TATTGATATGAATG...............................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ATA--------CAGTCAGCGTTGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCATCACGCTGTATACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCATCACGCTGTATACGGCATAATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAATAAATAC--ATATA--------------------------------------------------------T------A------------...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATCATCATCACGCTGTATACGGCATAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ATA--------CAGTCAGCGTTGTCAATGCCT............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................AATGCCTGAGCTTATGTTAA...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................TGCCTGAGCTTATGTTAATAT............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................TCACGCTGTATACGGCATAATGAAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CAGTCAGCGTTGTCAATGCCT............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATT------------------------TGAACA--------------T--ACGT---ATGTACGCA...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTAATGATCAGTATATG------TT..............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CATTAATATA--------CAGTCAGCGTT......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAATTGAAATCATCATCACGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................TCACGCTGTATACGGCATAATGAAATACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATCATCACGCTGTATACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AATGCCTGAGCTTATGTTAATA.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................ATATG------TTCG-----------------------------------------------TATTGATATGAATG...............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................T---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATATA--------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AATATTTATTTTAATGATCAGTATATG------T...............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTCTATGAATTGAAATCATCATCACGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TATGAATTGAAATCATCATCACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TGAAATGTAAGTATC----TTGCA-AT---------------------------------------------------------------------------------------GTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTCTATGAATTGAAATCATCATCACGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGAAATCATCATCACGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGAATTGAAATCATCATCACGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CAGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................TCATCATCACGCTGTATACGGCATAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCACGCTGTATACGGCATAATGAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CAGCGTTGTCAATGCCTGAGCTTAT....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AATCATCATCACGCTGTATACGGCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAATCATCATCACGCTGTATACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATCATCATCACGCTGTATACGGCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AATATA--------CAGTCAGCGTTGTCAATGCCT............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTAC------------------------------------------AT-----CCTT-TTCATT------------------------..........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTATGAATTGAAATCATCATCACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................GCATAATGAAATGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCAGCGTTGTCAATGCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATCACGCTGTATACGGCATAATGAAATAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCTGTATACGGCATAATGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTAC------------------------------------------AT-----CCTT-TTCATT------------------------TG........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCAGCGTTGTCAATGCCTGAGCTTATGT..................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCATCACGCTGTATACGGCATAATGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATGGAGTTCTATGAATTGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................CGGCATAATGAAATGTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................TA--------CAGTCAGCGTTGTCAATGCCTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GTTGTCAATGCCTGAGCTTATG...................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ATATA--------CAGTCAGCGTTGTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................TGCACATTAATATA--------CAGTCAGCGTTGTC...................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ATA--------CAGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........TATGAATTGAAATCATCATCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CACATTAATATA--------CAGTCAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TTCG-----------------------------------------------TATTGATATGAATGTAT............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.TGGAGTTCTATGAATTGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................AATCATCATCACGCTGTATACGGCATAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TTCG-----------------------------------------------TATTGATATGAATG...............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAATTGAAATCATCATCACGCTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTCAATGCCTGAGCTTATGTTT................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........TGAATTGAAATCATCATCACGCTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCTGTATACGGCATAATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATTGAAATCATCATCACGCTGTATACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTCATT------------------------TGAACA--------------T--ACGT---ATGTACGCA...................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCTATGAATTGAAATCATCATCACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............AATTGAAATCATCATCACGCTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ATATA--------CAGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................TTAATATA--------CAGTCAGCGTTGTCAAT................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ATC----TTGCA-AT---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAATCATCATCACGCTGTATACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGAAATCATCATCACGCTGTATACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAATCATCATCACGCTGTATACGGCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCTATGAATTGAAATCATCATCACGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCATCATCACGCTGTATACGGCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGCAT-GTGCGCAAAAGCT....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TAATGATCAGTATATG------TTCG-----------------------------------------------TATT.........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATCATCACGCTGTATACGGCATAATGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTCATT------------------------TGAACA--------------T--ACGT---ATGTACGC....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACGCTGTATACGGCATAATGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TAATATA--------CAGTCAGCGTTGTCAATG...............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CACATTAATATA--------CAGTCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................ATCATCATCACGCTGTATACGGCATAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CATCACGCTGTATACGGCATAATGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AATATA--------CAGTCAGCGTTGTCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................ATA--------CAGTCAGCGTTGTCACCC...............................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
droSim2
ATGGAATTCTATGAATTGAAATCATCATCACGCTGTTTACGGCATAATGAAATGTAAGTAGC----TTGCA-AT---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATCTA--------CAGTCAGCGTTGTCAATGCCTGAGCTAATGCTAATATTTATTTTCATGATCAGTATATG------TACG-----------------------------------------------TATAGATATGAATGTACACTGAAATAAATAT--G------------------------------------------------------------T------A------------TAATCAAACGTAC------------------------------------------AT-----CCTT-TTCATA------------------------TGAATA--------------T--ATGT---ATGTACGCAT-C-AAGCACAAGCTT------TATAT-TT-------GAA--GTATGATTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............ATTGAAATCATCATCACGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
................TGAAATCATCATCACGCTGTTTACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.................................TGTTTACGGCATAATGAAATACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...........TGAATTGAAATCATCATCACGCTGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.........................CATCACGCTGTTTACGGCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
droSec2
ATGGAGTTCTATGAATTGAAATCATCATCACGCTGTTTACGGCATAATGAAATGTAAGTAGT----TTGCA-AT---------------------------------------------------------------------------------------GTAAATA---------------------------------------------------------------------------------------------TATTGCACATTAATCTA--------CAGTCAGCGTTGTCAATGCCTGAGCTAATGCTAATATTTATTTTCATGATCAGTATATG------TACG-----------------------------------------------TATAGATATGAATGTACACTGAAATACATAC--G------------------------------------------------------------T------A------------TAATCAAACGTAC------------------------------------------AT-----CCTT-TTCATA------------------------TGAATA--------------T--ATGT---ATGTACGCAT-CTGCGCACAAGCTT------TATAT-TT-------GAA--GTATGATTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................TTCATGATCAGTATATG------TACG-----------------------------------------------T............................................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................................................................................................................................................................................................................TTAATCTA--------CAGTCAGCGTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.........................CATCACGCTGTTTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT---ATGTACGCAT-CTGCGCACT........................................2211.0011000
.....GTTCTATGAATTGAAATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droYak3
ATGGAGTTCTATGAATTGAAATCTTCATCACGCTGTTTACGGCCTAATGAAATGTAAGTAGC----TTGTA-ATCAA----------------------------------------------------------------------------------ATCTAAAT-----------------------------------------------------------------------------------------ATGTATATTGCACATTAATTTC--------CAGTCAGCGTTGTCAATGCCTGAACTCATGTTAAAATGAATTTTCATGATCA-----TGTACGGATAAATATATATGTA--------------------------------------------A--TGTATATATTCAGATATGTATATGTATG--------------------------------------------------------T------A------------TAAGCAAATGTAC------------------------------------------AT-----CCTTTTTCATA------------------------TGAAGA--------------T--ATAT--A----------TGTGTGTACTAGCAT------CATAT-TT-------GAT--GTATGATTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................TATTGCACATTAATTTC--------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......................CTTCATCACGCTGTTTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00200200000000
..............................................................................................................................................................................................................................................................................TTAATTTC--------CAGTCAGCGTTGTC...................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...................................................................................................................................................................................................................................................................................TTC--------CAGTCAGCGTTGTCAATGCCT............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
...................................................................................................................................................................................................................................................................................................................................GAATTTTCATGATCA-----TGTACGGATA..............................................................................................................................................................................................................................................................................................................................................................2511.00110000000000
.............................................................................................................................................................................................................................................................................ATTAATTTC--------CAGTCAGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
....................ATCTTCATCACGCTGTTTACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
droEre2
ATGGAGTTCTATGAATTAAAATCATCTTCACGCTGTTTACGGCCTAATGAAATGTAAGTAGC----TTGTA-ATCTA----------------------------------------------------------------------------------ATGTAAAT-----------------------------------------------------------------------------------------ATGTATATTGCACATTCATTTA--------CAGTCAGGGTTGACAATGCCTGAGTTCATGTTAAAATGTATTTTCATGATCGGTATACA------TAAG-----------------------------------------------TACATACATATGTGTATATCAATATATACATATGTATG--------------------------------------------------------T------T------------TAAACAAATGTAC------------------------------------------AT-----CCTTTTTCATA------------------------TGACGA--------------T--AT----------------GTGTGTACAAGCAT------CATAT-TT-------GAA--GTATGATTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................TGTTTACGGCCTAATGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000020
.........................................................................................................................................................................................................................................................................GCACATTCATTTA--------CAGTCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCATA------------------------TGACGA--------------T--AT----------------GTGTG............................................2311.0010001000
..........ATGAATTAAAATCATCTTCACGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..............ATTAAAATCATCTTCACGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
.........................CTTCACGCTGTTTACGGCCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010

Generated: 05/16/2015 at 08:09 PM