dvi_21404

exon [dvir_GLEANR_4972:1]; CDS [Dvir\GJ19736-cds]; exon [dvir_GLEANR_4972:2]; CDS [Dvir\GJ19736-cds]; intron [Dvir\GJ19736-in]

------############################################-----------------------------------------------------------------------------------------------------------------------------------------------################################################## ACTCGAATGTTTAGCCACTGGCAGCCCCACGAGGTTGCCACCACAGACAGGTCTTAGACCCTCTTCCCTCGATTTTTCAATATACAGGGGTCTCCCACACTGGACTGATCATATCAATCAACACCGCTGCCCGATACCCAAAGCTGGAAAAGATCATCGACAGGCCAACCAATATTAATTTCTTCCGCTGCAGGCTTACCGATTACATCTACCCAGACATCGATATAGCTTCCGCAGAGGATA *******************************************************************************...(((((((.((...((.(((..((((.......))))...))).))...)).))))....))).................******************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060686 Argx9_0-2h_embryos_total	SRR060679 140x9_testes_total	V053 head	SRR060680 9xArg_testes_total	SRR060671 9x160_males_carcasses_total	SRR060670 9_testes_total	SRR060658 140_ovaries_total	SRR060672 9x160_females_carcasses_total	SRR060681 Argx9_testes_total
.........................................................................................................................................CCAAAGCTGGAAAAGATCATCGACAG................................................................................	26	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.................................................................................ATACAGGGGTCTCCCACACTG.............................................................................................................................................	21	0	2	0.50	1	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................CCATCGATAGAGCTTCCG.........	18	2	3	0.33	1	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................CCAGTCATCGTTATTGCTTCC..........	21	3	3	0.33	1	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................CATCGATAAAGCTTCCCG........	18	3	20	0.15	3	0	0	0	0	0	0	1	1	1
........................................................................................................................................................................................................................CCATCGATAAAGCTTCCCCA.......	20	3	7	0.14	1	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................CCCGACATCGAGATAGCTAC...........	20	3	9	0.11	1	0	0	1	0	0	0	0	0	0
..............................................................................................................AGAACAATCAACACCGGTG..................................................................................................................	19	3	20	0.10	2	0	2	0	0	0	0	0	0	0
........................................................................................................................................................................................................................ACATCGATAAAGCTTCCCG........	19	3	18	0.06	1	0	0	0	0	0	1	0	0	0

TGAGCTTACAAATCGGTGACCGTCGGGGTGCTCCAACGGTGGTGTCTGTCCAGAATCTGGGAGAAGGGAGCTAAAAAGTTATATGTCCCCAGAGGGTGTGACCTGACTAGTATAGTTAGTTGTGGCGACGGGCTATGGGTTTCGACCTTTTCTAGTAGCTGTCCGGTTGGTTATAATTAAAGAAGGCGACGTCCGAATGGCTAATGTAGATGGGTCTGTAGCTATATCGAAGGCGTCTCCTAT ******************************************************************************...(((((((.((...((.(((..((((.......))))...))).))...)).))))....))).................*******************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060655 9x160_testes_total	V053 head	M047 female body	V047 embryo	V116 male body	SRR060684 140x9_0-2h_embryos_total
.......................................................TCTGGGAGCAGTGAGCTAAA........................................................................................................................................................................	20	2	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................GCGGGGATATGGGTTTCGACC................................................................................................	21	3	2	0.50	1	0	0	1	0	0	0
..................................................................................................................CATAGTTGTGGCGACGGGGT.............................................................................................................	20	3	6	0.17	1	0	1	0	0	0	0
............................................................................................................AGGATAGTTAGTTGTGATGA...................................................................................................................	20	3	7	0.14	1	0	0	0	1	0	0
...........ATCGGTGACCGTGTGGGTGTTC..................................................................................................................................................................................................................	22	3	7	0.14	1	0	1	0	0	0	0
....................................................................................................................TAGTTGGGGCGACGGGGT.............................................................................................................	18	2	7	0.14	1	0	1	0	0	0	0
.........................................................TGGGAGAGGGGGCCTAAAA.......................................................................................................................................................................	19	3	7	0.14	1	0	0	0	0	1	0
............TCGGCGACCGTGGGTGTGCTC..................................................................................................................................................................................................................	21	3	7	0.14	1	0	1	0	0	0	0
.......................................................................TAAAAAGTTGTATGTGCC..........................................................................................................................................................	18	2	8	0.13	1	0	0	0	0	0	1
..................................................................................................................GATAGTTGTGGCTACGGGGT.............................................................................................................	20	3	10	0.10	1	0	1	0	0	0	0
............................................................................................................................ACGAGGGGCTATGGGTT......................................................................................................	17	2	10	0.10	1	0	1	0	0	0	0
....................................CCGCAGTGTCTGTCCAGA.............................................................................................................................................................................................	18	3	20	0.05	1	0	0	1	0	0	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_13324:1485157-1485399 +	dvi_21404	ACTCGAAT--------GTTTAGCCACTGGCAGCCCCACGAGGTTGC-CACCACAGACAGGTCTTAGACCCTCTTCCCTCGATTTTTCAATATACAGGGGTCTCCCACACTGG----A---C----TGATCATATCA---------------------------------------------ATCAA---CACCGCTGCCCGATACCCAAAGCTGGAAAAGATCATCGACAGGCCAACCAATATTAATTTCTTCCGCTGCAGGCTTACCGATTACATCTACCCAGACATCGATATAGCTTCCGCAGAGGATA
droMoj3	scaffold_6680:24183958-24184249 +		ACACAGA---------TCATTGCCACGGGCAGTCCCACTCGGTTCC-CAGACCATAATAGACAAAGGCCTTCCTGTCTGGACTTTGGTCTTTATAAGGGTATACCTCAATGG----A-AGC----TGAGAATCGCCACTCATAACGATCTTGGCTCAGATCACATGCCCCTGGTAGTCTCGCTGGATGCTACCGTAAAATGCTATCCCCAGGCCGAAAGACTGATCAACAGGAATGTTGACATAAACTTATTTAAGCTGATCTTAAACAATAAGTTCCATCCTGAATTAGAATTGCACTCGGAACATGATA
droWil2	scf2_1100000004590:494656-494728 +		TT-----------------TAGCCACTGGCGAGCCAACTTTCTTCT-CGTACAATACAAGGCTTACACCATCCGCTCTAGATTTCTTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5	3:19770635-19770673 -		ACATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTCAGCAGAGGATG
droPer2	scaffold_473:7985-8023 +		ACATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTCAGCAGAGGATG
droAna3	scaffold_12943:349861-349944 +		GCTAAAA---------TTCTTGCCACTGGTTCACCAACTAGATACC-CTTATGTACCTGGCCACACAGCTTCTTGCATAGACTTTGCATTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1	scf7180000396145:1035-1127 +		GCTAGAATGGCTAAAATTCTTGCCACTGGTTCACCAACTAGATACC-CATATGTATCCGGTCACACAGCTACTTGCATTGATTTTGCATTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1	scf7180000301710:314441-314512 +		ACATTAGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCAGGAGAACGCTTGATGACTCCATAAACCTCAATATGGACATCAACTCAGCCGAGGATG
droFic1	scf7180000453800:2475021-2475105 +		TCCAAAA---------TACTTGCCACTGGTTCACCAACGAGATACCCCATATGTTCCTAGCCACACTGCTACTTGCATCGATTTTGCTTTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000776538:67946-68052 -		ACTCAAATA-TGCAGATTTTGGCTACTGGCGGACCCACTCATTTTC-CTTGGATCAAAGACCACCTCCCGACGGCCATTGATTTTGCTGTGTACAAAGGCATCCCGTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1	scf7180000415204:236673-236747 +		CACCGGAT--------GCCTGATG----GCTTCTTAATGAGCCGCG----------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCGAAACTCGAAACTTGAAAGGGTCAGCAG----------------------------------------------------------------------------TAAGCCA
dm3	chr2R:1987030-1987129 +		AGCTAAGA--------TCCTCGCAACTGGCTCTCCGACAAGGTATC-CGTATGTGCCCAGCCATACGCCCTCATGCATAGATTTCGCAGTGTATCATGGTATACCAGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2	2l:21477284-21477400 +		GCTAATA---------TTTTTTTTACAGGATCACCAACAAGGTACC-CACATGTGTAAAGTCATACGCCCTCCTGCATTGATTTTGTATTGCATCACGGTATACAATACAAA--CGG---C----TGGACTTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA
droSec2	scaffold_141:21739-21859 -		ACTGGATT--------GCCACTCCACTGGTGAGCCAACCCACTGGC-CTACTAACCCTGCCTTGCTTCCCGACCTCTTGGATTTTGCCATCTCCAAAGGCATAG-------GACCAA---C----CAGA----CTC---------------------------------------------ACATG---CA-------------------------------------------------------------------------------------------------------------------CCACT
droYak3	v2_chr2h_random_025:23697-23734 -		CATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTAAACATCGACATAAATTTTCCAGAAGACA
droEre2	scaffold_4690:12874691-12874983 +		AGTCAACA--------CGCTGGCTACAGGCAGTCCTACTCGGTATC-CGTACGGTAGAAGAGGAACTCCAAGCTGCATTGATTTTGCAGTAACGAAAGGCGTTCTCGATATT----CATGCTTCCATAACATCG-----GCTCCTGATCTCAGCTCTGATCACCTGCCTCTTATCATAACGCTGGATGTCACAGCATTGACATATCCTACAGCAGATCGATTGATAACCAGACACACCAACTTAGAAATGTTCTGCGGTCTTCTAGAGCAATCTCTGTATCTTGATATAGAAATCAACTCAGAAGAAGATA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

ACTCGAAT--------GTTTAGCCACTGGCAGCCCCACGAGGTTGC-CACCACAGACAGGTCTTAGACCCTCTTCCCTCGATTTTTCAATATACAGGGGTCTCCCACACTGG----A---C----TGATCATATCA---------------------------------------------ATCAA---CACCGCTGCCCGATACCCAAAGCTGGAAAAGATCATCGACAGGCCAACCAATATTAATTTCTTCCGCTGCAGGCTTACCGATTACATCTACCCAGACATCGATATAGCTTCCGCAGAGGATA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.............................................................................................................................................................................................................CCAAAGCTGGAAAAGATCATCGACAG................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................ATACAGGGGTCTCCCACACTG........................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ACACAGA---------TCATTGCCACGGGCAGTCCCACTCGGTTCC-CAGACCATAATAGACAAAGGCCTTCCTGTCTGGACTTTGGTCTTTATAAGGGTATACCTCAATGG----A-AGC----TGAGAATCGCCACTCATAACGATCTTGGCTCAGATCACATGCCCCTGGTAGTCTCGCTGGATGCTACCGTAAAATGCTATCCCCAGGCCGAAAGACTGATCAACAGGAATGTTGACATAAACTTATTTAAGCTGATCTTAAACAATAAGTTCCATCCTGAATTAGAATTGCACTCGGAACATGATA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
ACACAGA---------TCATTGCCACGGGC.........................................................................................................................................................................................................................................................................................	21	1	7.00	7	7	0	0	0	0	0
ACACAGA---------TCATTGCCACGGGCAGTC.....................................................................................................................................................................................................................................................................................	25	1	6.00	6	4	0	0	0	2	0
...............................................................................................................................................................................................................................................ACATAAACTTATTTAAGCTGATCT................................................	24	2	4.50	9	8	0	0	0	1	0
...............................................................................................................................................................................................................................................ACATAAACTTATTTAAGCTGATCTTA..............................................	26	2	4.00	8	8	0	0	0	0	0
.............................................................................................................TGG----A-AGC----TGAGAATCGCCACTCA..........................................................................................................................................................................	23	1	4.00	4	4	0	0	0	0	0
ACACAGA---------TCATTGCCACGGGCAGTCCC...................................................................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTTATAAG......................................................................................................................................................................................................................	28	3	2.33	7	7	0	0	0	0	0
ACACAGA---------TCATTGCCACGGGCAGTCC....................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	1	0	0	0	1
...............................................................................................................................................................................................................................................ACATAAACTTATTTAAGCTGATCTT...............................................	25	2	1.50	3	3	0	0	0	0	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTTA..........................................................................................................................................................................................................................	24	3	1.33	4	4	0	0	0	0	0
.......................................................................CCTGTCTGGACTTTGGTCTTTATAAG......................................................................................................................................................................................................................	26	3	1.33	4	4	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TCCTGAATTAGAATTGCACTCGGAACA.....	27	1	1.00	1	1	0	0	0	0	0
.....................................................................................................TACCTCAATGG----A-AGC----TGAGAATCGCCACT............................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
ACACAGA---------TCATTGCCACGGGCAGT......................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
ACACAGA---------TCATTGCCACGG...........................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTT...........................................................................................................................................................................................................................	23	3	1.00	3	3	0	0	0	0	0
...............................................................................................................................................................................................................................................ACATAAACTTATTTAAGCTGATCTTAA.............................................	27	2	1.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................CATAAACTTATTTAAGCTGATCT................................................	23	2	1.00	2	2	0	0	0	0	0
ACACAGA---------TCATTGCCACGGGCAGTCCCAC.................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.CACAGA---------TCATTGCCACGGGCAGTCCCAC.................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
..............................................................................................................GG----A-AGC----TGAGAATCGCCACTCA..........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
ACACAGA---------TCATTGCCACGGG..........................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................ACATAAACTTATTTAAGCTGATC.................................................	23	2	1.00	2	1	0	0	0	1	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTTAT.........................................................................................................................................................................................................................	25	3	1.00	3	3	0	0	0	0	0
ACACAGA---------TCATTGCCACGGGCAG.......................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...........................................TCC-CAGACCATAATAGACAAAGGCC..................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................TCTCGCTGGATGCTACCGTAAAA................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.............................................................................................................TGG----A-AGC----TGAGAATCGCCACTCAT.........................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.............................................................................................................TGG----A-AGC----TGAGAATCGCCACTC...........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
ACACAGA---------TCATTGCCACG............................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................................TTGGCTCAGATCACATGCCCCTGGTAGTC.....................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................TAAAATGCTATCCCCAGGCCGAAAGAC..........................................................................................	27	2	1.00	2	2	0	0	0	0	0
................................................................................................................................................................................TCTCGCTGGATGCTACCGTAAA.................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................CCTGGTAGTCTCGCTGGATGC..........................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTTATAAGG.....................................................................................................................................................................................................................	29	3	0.67	2	2	0	0	0	0	0
......................................................TAATAGACAAAGGCCTTCCTGTTG.........................................................................................................................................................................................................................................	24	2	0.50	1	1	0	0	0	0	0
...................................................................................TTGGTCTTTATAAGGGTATACCTCA...........................................................................................................................................................................................................	25	2	0.50	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................ATAAACTTATTTAAGCTGATCTTAAA............................................	26	2	0.50	1	1	0	0	0	0	0
............................................................................CTGGACTTTGGTCTTTATAAGGGT...................................................................................................................................................................................................................	24	2	0.50	1	1	0	0	0	0	0
...................................................................................TTGGTCTTTATAAGGGTATACCTC............................................................................................................................................................................................................	24	2	0.50	1	1	0	0	0	0	0
..............................................................................................................................................................................................ACCGTAAAATGCTATCCCCAG....................................................................................................	21	2	0.50	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................ATAAACTTATTTAAGCTGATCT................................................	22	2	0.50	1	1	0	0	0	0	0
......................................................TAATAGACAAAGGCCTTCCTG............................................................................................................................................................................................................................................	21	2	0.50	1	1	0	0	0	0	0
..................................................................................................................................................................................................................GGCCGAAAGACTGATCAACAGGAATG...........................................................................	26	2	0.50	1	1	0	0	0	0	0
...............................................................................................................................................................................................................CCAGGCCGAAAGACTGATCAACAGGT..............................................................................	26	2	0.50	1	1	0	0	0	0	0
...............................................................................................................................................................................................................CCAGGCCGAAAGACTGATCAAC..................................................................................	22	2	0.50	1	1	0	0	0	0	0
...............................................................................................................................................................................................................CCAGGCCGAAAGACTGATCAACAGG...............................................................................	25	2	0.50	1	1	0	0	0	0	0
..................................................................................................................................................................................................................GGCCGAAAGACTGATCAACAGGAATCC..........................................................................	27	2	0.50	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................CATAAACTTATTTAAGCTGATCTC...............................................	24	2	0.50	1	1	0	0	0	0	0
................................................................................................................................................................................................................CAGGCCGAAAGACTGATCAACAGGAAT............................................................................	27	2	0.50	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................CATAAACTTATTTAAGCTGATCTTA..............................................	25	2	0.50	1	1	0	0	0	0	0
..................................................................................................................................................................................................................GGCCGAAAGACTGATCAACAGGAAAA...........................................................................	26	2	0.50	1	1	0	0	0	0	0
........................................................................................................................................................................................................GCTATCCCCAGGCCGAAAGACTGATC.....................................................................................	26	2	0.50	1	1	0	0	0	0	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTTATC........................................................................................................................................................................................................................	26	3	0.33	1	1	0	0	0	0	0
........................................................................CTGTCTGGACTTTGGTCTTTATAAG......................................................................................................................................................................................................................	25	3	0.33	1	1	0	0	0	0	0
......................................................................TCCTGTCTGGACTTTGGTCTTTATAAG......................................................................................................................................................................................................................	27	3	0.33	1	1	0	0	0	0	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTTATAA.......................................................................................................................................................................................................................	27	3	0.33	1	1	0	0	0	0	0
......................................................................TCCTGTCTGGACTTTGGTCTTTA..........................................................................................................................................................................................................................	23	3	0.33	1	1	0	0	0	0	0
.....................................................................TTCCTGTCTGGACTTTGGTCTTTATA........................................................................................................................................................................................................................	26	3	0.33	1	1	0	0	0	0	0
...................................................................CCTTCCTGTCTGGACTTTGGTCT.............................................................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0

droWil2

TT-----------------TAGCCACTGGCGAGCCAACTTTCTTCT-CGTACAATACAAGGCTTACACCATCCGCTCTAGATTTCTTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................................GTACAATACAAGGCTTACACCATCCG.............................................................................................................................................................................................................................................	26	3	1.00	3	0	3	0	0	0
.......................................................ACAAGGCTTACACCATCCGCTCTAGA......................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	1	0
..............................................................TTACACCATCCGCTCTAGATTT...................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	1	0
................................................GTACAATACAAGGCTTACACCAT................................................................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0
.......................................................ACAAGGCTTACACCATCCGCTCTAG.......................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
................................................GTACAATACAAGGCTTACACCA.................................................................................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0
.....................GCCACTGGCGAGCCAACTTTCTTC..........................................................................................................................................................................................................................................................................	24	4	0.25	1	0	1	0	0	0
........................................................CAAGGCTTACACCATCCGCTCT.........................................................................................................................................................................................................................................	22	4	0.25	1	0	1	0	0	0
..................................................ACAATACAAGGCTTACACCATC...............................................................................................................................................................................................................................................	22	5	0.20	1	0	1	0	0	0

dp5

ACATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTCAGCAGAGGATG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGGATG	25	2	113.50	227	0	3	0	0	0	0	1	188	35	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAGGATG	23	3	68.33	205	0	5	0	0	2	0	0	159	39	0
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGAGGA..	24	1	60.00	60	0	0	0	0	0	0	0	57	3	0
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGAGGATG	26	1	59.00	59	0	0	0	0	0	0	0	51	8	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGGA..	23	2	56.50	113	0	10	0	0	0	0	0	84	19	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGGAT.	24	2	20.50	41	0	2	1	0	0	0	0	31	7	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGG...	22	2	17.50	35	0	10	0	0	0	0	0	24	1	0
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGAGG...	23	1	14.00	14	0	1	0	0	0	0	0	10	3	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTCAGCAGAGGA..	28	1	13.00	13	0	0	0	0	0	0	0	9	4	0
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGAGGAT.	25	1	10.00	10	0	0	0	0	0	0	0	10	0	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTCAGCAGAGG...	27	1	9.00	9	0	1	0	0	0	0	0	8	0	0
...TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGG.............	23	1	6.00	6	0	5	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTCAGCAGAG....	26	1	5.00	5	0	0	0	0	0	0	1	4	0	0
...TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTCA..........	26	1	5.00	5	0	5	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTCAGC........	22	1	5.00	5	0	1	0	0	0	0	1	3	0	0
..ATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGG.............	24	1	5.00	5	0	4	0	0	0	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGAG....	22	1	4.00	4	0	1	0	0	0	0	0	3	0	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAGGA..	21	3	3.33	10	0	0	0	0	1	0	0	9	0	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTCAGCAGA.....	25	1	3.00	3	0	1	0	0	0	0	0	2	0	0
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGA.....	21	1	3.00	3	0	1	0	0	0	0	0	1	1	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAG....	21	2	2.50	5	0	2	0	0	0	0	2	0	1	0
.....................................................................................................................................................................................................................................................................................CATCTAAACACTGAGCTCAGGTCA..........	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTC...........	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGA.....	20	2	2.00	4	0	0	0	0	0	0	0	4	0	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGGATA	25	2	2.00	4	0	0	0	0	0	0	0	3	1	0
..........................................................................................................................................................................................................................................................................................AAACACTGAGCTCAGGTCAGCAGAGGA..	27	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.....................................................................................................................................................................................................................................................................................CATCTAAACACTGAGCTCAGGTC...........	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TCTAAACACTGAGCTCAGGTCAG.........	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTC...........	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................CTGAGCTCAGGTCAGCAGAGGATG	24	3	1.33	4	0	0	0	0	0	0	0	3	1	0
......................................................................................................................................................................................................................................................................................ATCTAAACACTGAGCTCAGGTCAGC........	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGA...	22	2	1.00	2	0	1	0	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTCAG.........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................CTAAACACTGAGCTCAGGTCA..........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................AACACTGAGCTCAGGTCAGCAGAGGA..	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
........................................................................................................................................................................................................................................................................................CTAAACACTGAGCTCAGG.............	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCA.......	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TAAACACTGAGCTCAGGTT...........	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTCAG.........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................ATCTAAACACTGAGCTCAGG.............	20	1	1.00	1	0	0	0	0	0	0	0	1	0	0
..ATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAG..............	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................AACACTGAGCTCAGGTCAGCAGA.....	23	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..ATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTCA..........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..ATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTC...........	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.CATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGG.............	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGAGGAAA	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAGG...	20	3	1.00	3	0	2	0	0	0	0	0	1	0	0
...TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGC.............	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AAACACTGAGCTCAGGTCAGCAGAGG...	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................TCAGGTCAGCAGAGGATG	18	4	0.75	3	0	1	0	0	0	0	0	2	0	0
.................................................................................................................................................................................................................................................................................................GAGCTCAGGTCAGCAGAGGATG	22	4	0.75	3	0	1	0	0	0	0	0	2	0	0
...................................................................................................................................................................................................................................................................................................GCTCAGGTCAGCAGAGGATG	20	4	0.75	3	0	1	0	0	0	0	0	1	1	0
...............................................................................................................................................................................................................................................................................................CTGAGCTCAGGTCAGCAGAGG...	21	3	0.67	2	0	1	0	0	0	0	0	1	0	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAGGATC	23	3	0.67	2	0	0	0	0	0	0	0	0	2	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAGGAT.	22	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.....................................................................................................................................................................................................................................................................................................TCAGGTCAGCAGAGGATA	18	4	0.50	2	0	0	0	0	0	0	0	2	0	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGGG..	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAG......	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................GAGCTCAGGTCAGCAGAGG...	19	4	0.50	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAG....	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAGGAA.	22	3	0.33	1	0	0	0	0	0	0	0	1	0	0
................................................................................................................................................................................................................................................................................................TGAGCTCAGGTCAGCAGAGGATA	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................CTGAGCTCAGGTCAGCAGAGA...	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................GCTCAGGTCAGCAGAGGATC	20	4	0.25	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................AGCTCAGGTCAGCAGAGGATA	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................AGCTCAGGTCAGCAGAGGATG	21	4	0.25	1	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................AGCTCAGGTCAGCAGAGGA..	19	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................GCTCAGGTCAGCAGAGGAT.	19	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................GAGCTCAGGTCAGCAGAGGA..	20	4	0.25	1	0	0	0	0	0	0	0	1	0	0

droPer2

ACATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCAGGTCAGCAGAGGATG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..................................................................................................................................................................................................................................................................................................AGCTCAGGTCAGCAGAGGATG	21	9	0.89	8	0	8	0	0	0	0
...TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTC................	20	2	0.50	1	1	0	0	0	0	0
...TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTAAACACTGAGCTCA...............	21	2	0.50	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................GCTCAGGTCAGCAGAGGATG	20	9	0.33	3	0	3	0	0	0	0
..................................................................................................................................................................................................................................................................................................AGCTCAGGTCAGCAGAGGA..	19	9	0.22	2	0	1	0	0	0	1
.............................................................................................................................................................................................................................................................................................CACTGAGCTCAGGTCAGCAGAGGA..	24	5	0.20	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................AGCTCAGGTCAGCAGAGG...	18	9	0.11	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................ACTGAGCTCAGGTCAGCAGAGGA..	23	9	0.11	1	0	1	0	0	0	0

droAna3

GCTAAAA---------TTCTTGCCACTGGTTCACCAACTAGATACC-CTTATGTACCTGGCCACACAGCTTCTTGCATAGACTTTGCATTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..TAAAA---------TTCTTGCCACTGGTTCACCAAC.................................................................................................................................................................................................................................................................................	27	5	0.40	2	1	1	0	0	0	0
................................ACCAACTAGATACC-CTTATGTACC..............................................................................................................................................................................................................................................................	24	5	0.20	1	0	1	0	0	0	0
.................................CCAACTAGATACC-CTTATGTACC..............................................................................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0
................................ACCAACTAGATACC-CTTATGTACCTG............................................................................................................................................................................................................................................................	26	5	0.20	1	1	0	0	0	0	0
..........................................TACC-CTTATGTACCTGGCCAC.......................................................................................................................................................................................................................................................	21	5	0.20	1	0	1	0	0	0	0
..............................TCACCAACTAGATACC-CTTATGTACC..............................................................................................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0
..........................................TACC-CTTATGTACCTGGCCACA......................................................................................................................................................................................................................................................	22	5	0.20	1	0	1	0	0	0	0
...........................................ACC-CTTATGTACCTGGCCACACA....................................................................................................................................................................................................................................................	23	5	0.20	1	1	0	0	0	0	0
.............................TTCACCAACTAGATACC-CTTATGTACC..............................................................................................................................................................................................................................................................	27	5	0.20	1	0	1	0	0	0	0
..........................................TACC-CTTATGTACCTGGCCACACAG...................................................................................................................................................................................................................................................	25	5	0.20	1	1	0	0	0	0	0
.......................................AGATACC-CTTATGTACCTGGCCAC.......................................................................................................................................................................................................................................................	24	5	0.20	1	1	0	0	0	0	0
............................................CC-CTTATGTACCTGGCCACACAGCTTCC..............................................................................................................................................................................................................................................	28	5	0.20	1	0	1	0	0	0	0
......................................TAGATACC-CTTATGTACCTGGC..........................................................................................................................................................................................................................................................	22	5	0.20	1	1	0	0	0	0	0
..........................................TACC-CTTATGTACCTGGCCACACAGC..................................................................................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0
.................TCTTGCCACTGGTTCACCAACTAG..............................................................................................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0
................................ACCAACTAGATACC-CTTATG..................................................................................................................................................................................................................................................................	20	6	0.17	1	1	0	0	0	0	0
......A---------TTCTTGCCACTGGTTCACCA...................................................................................................................................................................................................................................................................................	21	6	0.17	1	1	0	0	0	0	0
.........................................................TGGCCACACAGCTTCTTGCATAGACTT...................................................................................................................................................................................................................................	27	6	0.17	1	1	0	0	0	0	0

droBip1

GCTAGAATGGCTAAAATTCTTGCCACTGGTTCACCAACTAGATACC-CATATGTATCCGGTCACACAGCTACTTGCATTGATTTTGCATTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ACATTAGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCAGGAGAACGCTTGATGACTCCATAAACCTCAATATGGACATCAACTCAGCCGAGGATG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCCAAAA---------TACTTGCCACTGGTTCACCAACGAGATACCCCATATGTTCCTAGCCACACTGCTACTTGCATCGATTTTGCTTTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ACTCAAATA-TGCAGATTTTGGCTACTGGCGGACCCACTCATTTTC-CTTGGATCAAAGACCACCTCCCGACGGCCATTGATTTTGCTGTGTACAAAGGCATCCCGTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CACCGGAT--------GCCTGATG----GCTTCTTAATGAGCCGCG----------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCGAAACTCGAAACTTGAAAGGGTCAGCAG----------------------------------------------------------------------------TAAGCCA	Size	Hit Count	Total Norm	Total
No Reads

dm3

AGCTAAGA--------TCCTCGCAACTGGCTCTCCGACAAGGTATC-CGTATGTGCCCAGCCATACGCCCTCATGCATAGATTTCGCAGTGTATCATGGTATACCAGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......................................................................CATGCATAGATTTCGCAGTGTATC........................................................................................................................................................................................................................	24	11	23.73	261	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	6	0	2	0	0	0	0	8	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	0	3	1	0	2	4	6	1	6	5	0	1	4	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	31	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	15	1	1	1	11	0	66	1	24	5	12	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
...................TCGCAACTGGCTCTCCGACAAGGTA...........................................................................................................................................................................................................................................................................	25	12	16.33	196	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	9	2	6	6	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	46	0	32	0	25	8	42	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.......................................................................CATGCATAGATTTCGCAGTGTATCA.......................................................................................................................................................................................................................	25	11	13.73	151	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	5	0	0	0	0	0	0	22	4	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	4	0	0	2	7	3	7	2	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	15	0	0	0	5	0	16	0	13	2	7	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0
.GCTAAGA--------TCCTCGCAACTGGCTCT......................................................................................................................................................................................................................................................................................	24	13	11.31	147	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	22	14	3	25	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	12	0	7	0	13	10	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................CTCGCAACTGGCTCTCCGACAAGGTA...........................................................................................................................................................................................................................................................................	26	12	7.75	93	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0	11	0	16	10	23	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TAGATTTCGCAGTGTATCATGGTA..................................................................................................................................................................................................................	24	12	7.50	90	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	7	0	0	1	0	8	2	7	7	7	0	0	0	1	0	1	0	1	0	4	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	6	0	0	0	0	0	0
.......................................................................CATGCATAGATTTCGCAGTGTAT.........................................................................................................................................................................................................................	23	11	6.45	71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	5	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	4	2	0	1	3	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................TCCTCGCAACTGGCTCTCCGACAAGG.............................................................................................................................................................................................................................................................................	26	12	6.08	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	19	0	10	9	12	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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......................CAACTGGCTCTCCGACAAGGTATC-CGT.....................................................................................................................................................................................................................................................................	27	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................ATAGATTTCGCAGTGTATCATGGT...................................................................................................................................................................................................................	24	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TCGCAACTGGCTCTCCGACAAG..............................................................................................................................................................................................................................................................................	22	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAAGA--------TCCTCGCAACTGGCTCTC.....................................................................................................................................................................................................................................................................................	24	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAAGA--------TCCTCGCAACTGGCTCCT.....................................................................................................................................................................................................................................................................................	25	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGGCTCTCCGACAAGGTA...........................................................................................................................................................................................................................................................................	18	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGGCTCTCCGACAAGGTATC-........................................................................................................................................................................................................................................................................	20	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................AACTGGCTCTCCGACAAGG.............................................................................................................................................................................................................................................................................	19	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GCTAAGA--------TCCTCGCAACTG...........................................................................................................................................................................................................................................................................................	19	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTAAGA--------TCCTCGCAACTGGCTT.......................................................................................................................................................................................................................................................................................	22	13	0.15	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

GCTAATA---------TTTTTTTTACAGGATCACCAACAAGGTACC-CACATGTGTAAAGTCATACGCCCTCCTGCATTGATTTTGTATTGCATCACGGTATACAATACAAA--CGG---C----TGGACTTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................TTTACAGGATCACCAACAAGGTACC-CAC.....................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

ACTGGATT--------GCCACTCCACTGGTGAGCCAACCCACTGGC-CTACTAACCCTGCCTTGCTTCCCGACCTCTTGGATTTTGCCATCTCCAAAGGCATAG-------GACCAA---C----CAGA----CTC---------------------------------------------ACATG---CA-------------------------------------------------------------------------------------------------------------------CCACT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.......................................................................ACCTCTTGGATTTTGCCATCTCC.........................................................................................................................................................................................................................	23	20	1.50	30	26	0	4	0
.CTGGATT--------GCCACTCCACTGGTGA.......................................................................................................................................................................................................................................................................................	23	20	0.80	16	16	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAGCC....................................................................................................................................................................................................................................................................................	26	20	0.35	7	0	0	7	0
..........................................TGGC-CTACTAACCCTGCCTTGCTTCCC.................................................................................................................................................................................................................................................	27	20	0.35	7	7	0	0	0
.......................................................................ACCTCTTGGATTTTGCCATCTCCAA.......................................................................................................................................................................................................................	25	20	0.30	6	6	0	0	0
..........................................TGGC-CTACTAACCCTGCCTTGCTT....................................................................................................................................................................................................................................................	24	20	0.25	5	5	0	0	0
..........................................TGGC-CTACTAACCCTGCCTTGCT.....................................................................................................................................................................................................................................................	23	20	0.20	4	4	0	0	0
.......................................CACTGGC-CTACTAACCCTGCCTTGCT.....................................................................................................................................................................................................................................................	26	20	0.20	4	4	0	0	0
.......................................................................ACCTCTTGGATTTTGCCATCTC..........................................................................................................................................................................................................................	22	20	0.20	4	4	0	0	0
................................................TACTAACCCTGCCTTGCTTCCC.................................................................................................................................................................................................................................................	22	20	0.10	2	2	0	0	0
......................................................................GACCTCTTGGATTTTGCCATCTCC.........................................................................................................................................................................................................................	24	20	0.10	2	2	0	0	0
.......................................................................ACCTCTTGGATTTTGCCATCTCCAT.......................................................................................................................................................................................................................	25	20	0.10	2	2	0	0	0
..................................................................TCCCGACCTCTTGGATTTTGCCATC............................................................................................................................................................................................................................	25	20	0.10	2	0	0	2	0
.CTGGATT--------GCCACTCCACTGGTGATTT....................................................................................................................................................................................................................................................................................	26	20	0.10	2	2	0	0	0
..........................................TGGC-CTACTAACCCTGCCTTGCTTCCCG................................................................................................................................................................................................................................................	28	20	0.10	2	2	0	0	0
....GATT--------GCCACTCCACTGGTGAGC.....................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
......................................CCACTGGC-CTACTAACCCTGCCTT........................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
.....................................CCCACTGGC-CTACTAACCCTGCCTTGC......................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAGCCAAC.................................................................................................................................................................................................................................................................................	29	20	0.05	1	1	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAT......................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
...GGATT--------GCCACTCCACTGGTGAG......................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAGCT....................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0
......................................CCACTGGC-CTACTAACCCTGCCTTG.......................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
................................................TACTAACCCTGCCTTGCTTCCCGACC.............................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAGATT...................................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.......................................................................ACCTCTTGGATTTTGCCATCTCCTT.......................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
........................................................................CCTCTTGGATTTTGCCATCTC..........................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0
...............................................CTACTAACCCTGCCTTGCTTCCC.................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
.......................................................................ACCTCTTGGATTTTGCCATCTCCAC.......................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
..................................................................TCCCGACCTCTTGGATTTTGCCATCTC..........................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
.......................................CACTGGC-CTACTAACCCTGCCTTGC......................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAGCCA...................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
.......................................................................ACCTCTTGGATTTTGCCATCTCCAAAA.....................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAAA.....................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0
.CTGGATT--------GCCACTCCACTGGTGACT.....................................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
..........................................................................TCTTGGATTTTGCCATCTCCAAAG.....................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
.CTGGATT--------GCCACTCCACTGGTGAGCAT...................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	1
..........................................................................TCTTGGATTTTGCCATCTCCAAAGGC...................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.......................................CACTGGC-CTACTAACCCTGCCTTGCTT....................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.........................................................................CTCTTGGATTTTGCCATCTCC.........................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0

droYak3

CATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTAAACATCGACATAAATTTTCCAGAAGACA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
CATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTAAACATCGACATAAA..............	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

AGTCAACA--------CGCTGGCTACAGGCAGTCCTACTCGGTATC-CGTACGGTAGAAGAGGAACTCCAAGCTGCATTGATTTTGCAGTAACGAAAGGCGTTCTCGATATT----CATGCTTCCATAACATCG-----GCTCCTGATCTCAGCTCTGATCACCTGCCTCTTATCATAACGCTGGATGTCACAGCATTGACATATCCTACAGCAGATCGATTGATAACCAGACACACCAACTTAGAAATGTTCTGCGGTCTTCTAGAGCAATCTCTGTATCTTGATATAGAAATCAACTCAGAAGAAGATA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.....ACA--------CGCTGGCTACAGGCAGTCCTAC.................................................................................................................................................................................................................................................................................	25	20	1.30	26	0	0	0	0	0	0	26
......................................................................................CAGTAACGAAAGGCGTTCTCGATATT----CATGC..............................................................................................................................................................................................	31	20	1.25	25	0	0	0	0	0	0	25
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCTC................................................................................................................................................................	25	20	1.15	23	22	1	0	0	0	0	0
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACC.........................................................................	24	20	1.15	23	14	0	0	0	0	0	9
......................................TCGGTATC-CGTACGGTAGAAGAGGA.......................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
......................................TCGGTATC-CGTACGGTAGAAGAGG........................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
............................................TC-CGTACGGTAGAAGAGGAACTCCAAGC..............................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
........................................GGTATC-CGTACGGTAGAAGAG.........................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................................TCTTATCATAACGCTGGATGTCACA......................................................................................................................	25	20	0.95	19	19	0	0	0	0	0	0
........................................................................................................................................................................TCTTATCATAACGCTGGATGTCAC.......................................................................................................................	24	20	0.80	16	14	0	0	0	0	0	2
.....................................................................................GCAGTAACGAAAGGCGTTCTCGAT..........................................................................................................................................................................................................	24	20	0.80	16	0	0	0	0	0	0	16
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCTCAGC.............................................................................................................................................................	28	20	0.75	15	14	0	0	0	0	1	0
.....................................................................................GCAGTAACGAAAGGCGTTCTCGATAT........................................................................................................................................................................................................	26	20	0.70	14	0	0	0	0	0	0	14
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCTCA...............................................................................................................................................................	26	20	0.60	12	12	0	0	0	0	0	0
..................................................................TCCAAGCTGCATTGATTTTG.................................................................................................................................................................................................................................	20	20	0.55	11	11	0	0	0	0	0	0
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCAAC......................................................................	27	20	0.50	10	9	1	0	0	0	0	0
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCAACT.....................................................................	28	20	0.45	9	9	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGATAT........................................................................................................................................................................................................	25	20	0.40	8	0	0	0	0	0	0	8
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCAA.......................................................................	26	20	0.40	8	8	0	0	0	0	0	0
........................................................................................................................CTTCCATAACATCG-----GCTCCTG.....................................................................................................................................................................	21	20	0.35	7	7	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGAT..........................................................................................................................................................................................................	23	20	0.35	7	2	0	0	0	0	0	5
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCA........................................................................	25	20	0.35	7	7	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGATA.........................................................................................................................................................................................................	24	20	0.35	7	5	0	0	0	2	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGAT...................................................................................................................................................................	22	20	0.30	6	6	0	0	0	0	0	0
..TCAACA--------CGCTGGCTACAGGCAGTCC....................................................................................................................................................................................................................................................................................	25	20	0.30	6	6	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTAGAAATGTTCTGCGGT....................................................	21	20	0.30	6	4	0	0	0	2	0	0
.....................................................................................................................................................................................................................................................................................TATCTTGATATAGAAATCAACTCA..........	24	20	0.25	5	5	0	0	0	0	0	0
....AACA--------CGCTGGCTACAGGCAGTCCTAC.................................................................................................................................................................................................................................................................................	26	20	0.25	5	5	0	0	0	0	0	0
.......................TACAGGCAGTCCTACTCGGTA...........................................................................................................................................................................................................................................................................	21	20	0.25	5	5	0	0	0	0	0	0
................................................................................................................................................................................................AGCATTGACATATCCTACAGCAGATCGAT..........................................................................................	29	16	0.25	4	0	0	0	0	0	0	4
...................................................................................................................................................................................................................................................AGAAATGTTCTGCGGTCTTCTAGAG...........................................	25	20	0.25	5	1	0	0	0	0	0	4
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCAAT......................................................................	27	20	0.25	5	4	0	0	0	0	1	0
.....................................................................................................................................................TCAGCTCTGATCACCTGCCTC.............................................................................................................................................	21	20	0.25	5	5	0	0	0	0	0	0
..........................................................................................................................TCCATAACATCG-----GCTCCTGATCT.................................................................................................................................................................	23	20	0.20	4	4	0	0	0	0	0	0
..TCAACA--------CGCTGGCTACAGGCAGTCCTAC.................................................................................................................................................................................................................................................................................	28	20	0.20	4	4	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................AGAGCAATCTCTGTATCTTG...........................	20	20	0.20	4	4	0	0	0	0	0	0
.......................TACAGGCAGTCCTACTCGGTATC-CG......................................................................................................................................................................................................................................................................	25	20	0.20	4	4	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATC..................................................................................................................................................................	23	20	0.20	4	0	2	0	0	0	0	2
...................................................................................................................................TCG-----GCTCCTGATCTCAGCTCT..........................................................................................................................................................	21	20	0.20	4	4	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTG.....................................................................................................................................................................	20	20	0.20	4	4	0	0	0	0	0	0
...............................................................................................................................................CTGATCTCAGCTCTGATCACC...................................................................................................................................................	21	20	0.20	4	4	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................GTTCTGCGGTCTTCTAGAGCAATC......................................	24	20	0.20	4	0	0	0	0	0	0	4
.....................................................................................GCAGTAACGAAAGGCGTTCTCGATA.........................................................................................................................................................................................................	25	20	0.20	4	3	0	0	0	1	0	0
..................................................................................................................................................ATCTCAGCTCTGATCACCTGC................................................................................................................................................	21	20	0.20	4	4	0	0	0	0	0	0
.....................................................................................GCAGTAACGAAAGGCGTTCTCGA...........................................................................................................................................................................................................	23	20	0.15	3	3	0	0	0	0	0	0
..........................................................................................................................................................TCTGATCACCTGCCTCTTATCATAACGC.................................................................................................................................	28	20	0.15	3	3	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCT.................................................................................................................................................................	24	20	0.15	3	0	0	0	0	0	0	3
.................................................................................................................................CATCG-----GCTCCTGATCTCAGCT............................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCAACTT....................................................................	29	20	0.15	3	3	0	0	0	0	0	0
........................................................................................................................................................................TCTTATCATAACGCTGGATGTCACAG.....................................................................................................................	26	20	0.15	3	3	0	0	0	0	0	0
....................................................................................................................................CG-----GCTCCTGATCTCAGCTCTG.........................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................CGGTCTTCTAGAGCAATCTCTG..................................	22	20	0.15	3	3	0	0	0	0	0	0
......................................................................................................................................................................................................................................................AATGTTCTGCGGTCTTCTAGAG...........................................	22	20	0.15	3	1	0	0	0	0	0	2
.....................................................................................................................ATGCTTCCATAACATCG-----GCTC........................................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
..................................CTACTCGGTATC-CGTACGGTA...............................................................................................................................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
..................................................................TCCAAGCTGCATTGATTTT..................................................................................................................................................................................................................................	19	20	0.15	3	3	0	0	0	0	0	0
........................................................................................................................................................................TCTTATCATAACGCTGGATGTCACAGCA...................................................................................................................	28	20	0.15	3	3	0	0	0	0	0	0
......................................................................................................................................................................CCTCTTATCATAACGCTGGATGTCAC.......................................................................................................................	26	20	0.15	3	3	0	0	0	0	0	0
......................CTACAGGCAGTCCTACTCGG.............................................................................................................................................................................................................................................................................	20	20	0.15	3	3	0	0	0	0	0	0
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACAC..........................................................................	23	20	0.15	3	3	0	0	0	0	0	0
................................................................................................................................................................................................................................................CTTAGAAATGTTCTGCGGTCT..................................................	21	20	0.15	3	3	0	0	0	0	0	0
.....................GCTACAGGCAGTCCTACTCGG.............................................................................................................................................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
AGTCAACA--------CGCTGGCTACAGG..........................................................................................................................................................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
......................CTACAGGCAGTCCTACTCGGT............................................................................................................................................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
......................................................................................................................................................CAGCTCTGATCACCTGCCTCT............................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................TATCTTGATATAGAAATCAACTCAGA........	26	20	0.15	3	2	0	0	0	0	0	1
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCAT.......................................................................	26	20	0.15	3	3	0	0	0	0	0	0
..............................................................................................................................................................................................................CTACAGCAGATCGATTGATAA....................................................................................	21	16	0.13	2	0	0	0	0	0	2	0
..........................................................................................................................................................................................................................................................TTCTGCGGTCTTCTAGAGCAATCTCTG..................................	27	20	0.10	2	2	0	0	0	0	0	0
.......................................................................................................................................................................................................................ATCGATTGATAACCAGACACACC.........................................................................	23	20	0.10	2	2	0	0	0	0	0	0
....................................................................................................................................................................................................................................................GAAATGTTCTGCGGTCTTCTA..............................................	21	20	0.10	2	2	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TGCGGTCTTCTAGAGCAATCTCTG..................................	24	20	0.10	2	2	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TAGAAATGTTCTGCGGTCTTCTAGAGCA.........................................	28	20	0.10	2	2	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TCTGCGGTCTTCTAGAGCAATC......................................	22	20	0.10	2	2	0	0	0	0	0	0
.........................................................................................................................................................................CTTATCATAACGCTGGATGTCAC.......................................................................................................................	23	20	0.10	2	2	0	0	0	0	0	0
.......................................................................................................................................................................................................................ATCGATTGATAACCAGACACACCA........................................................................	24	20	0.10	2	2	0	0	0	0	0	0
...........................................................GAGGAACTCCAAGCTGCATTG.......................................................................................................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AAATGTTCTGCGGTCTTCTAG.............................................	21	20	0.10	2	1	0	0	0	1	0	0
.................................................................................................................................................................................................................................................TTAGAAATGTTCTGCGGTCTTCTAGAGCA.........................................	29	20	0.10	2	2	0	0	0	0	0	0
...................................................................................................................................................................CTGCCTCTTATCATAACGCTGGATG...........................................................................................................................	25	20	0.10	2	2	0	0	0	0	0	0
................................................................................................................................................TGATCTCAGCTCTGATCACCT..................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
...................................................................................................................................................TCTCAGCTCTGATCACCTGCC...............................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
....................GGCTACAGGCAGTCCTACTCGGTAT..........................................................................................................................................................................................................................................................................	25	20	0.10	2	2	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................ATAGAAATCAACTCAGAAG......	19	20	0.10	2	1	0	0	0	1	0	0
......CA--------CGCTGGCTACAGGCAGTCC....................................................................................................................................................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
.....................................................................................................................................................TCAGCTCTGATCACCTGCC...............................................................................................................................................	19	20	0.10	2	2	0	0	0	0	0	0
.............................CAGTCCTACTCGGTATC-CGTA....................................................................................................................................................................................................................................................................	21	20	0.10	2	1	0	0	0	1	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCTCAT..............................................................................................................................................................	27	20	0.10	2	1	0	0	0	1	0	0
..TCAACA--------CGCTGGCTACAGGCAGTCCT...................................................................................................................................................................................................................................................................................	26	20	0.10	2	2	0	0	0	0	0	0
..................................................................................................................................................ATCTCAGCTCTGATCACCTG.................................................................................................................................................	20	20	0.10	2	2	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGATATT----...................................................................................................................................................................................................	26	20	0.10	2	2	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TAGAAATGTTCTGCGGTCTTCTAG.............................................	24	20	0.10	2	2	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................GCGGTCTTCTAGAGCAATCTCTG..................................	23	20	0.10	2	2	0	0	0	0	0	0
..........................................................................................................................TCCATAACATCG-----GCTCCTGATCTCA...............................................................................................................................................................	25	20	0.10	2	2	0	0	0	0	0	0
.................................................................................................................................................GATCTCAGCTCTGATCACCTG.................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
.............................................................................................................................................................................TCATAACGCTGGATGTCACAG.....................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
.......................................................................................................CTCGATATT----CATGCTTCCATA.......................................................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
................................................................................................................................ACATCG-----GCTCCTGATCTCAGC.............................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
...................................................................................................................................................TCTCAGCTCTGATCACCTGC................................................................................................................................................	20	20	0.10	2	2	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGATC.........................................................................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	2
...........................................................................................................................................................................................................................................................TCTGCGGTCTTCTAGAGCA.........................................	19	20	0.10	2	2	0	0	0	0	0	0
...................TGGCTACAGGCAGTCCTACTCGGTA...........................................................................................................................................................................................................................................................................	25	20	0.10	2	2	0	0	0	0	0	0
..........................................................................................................................TCCATAACATCG-----GCTCCTGATC..................................................................................................................................................................	22	20	0.10	2	2	0	0	0	0	0	0
.................................................................................................................................................................................................GCATTGACATATCCTACAGCA.................................................................................................	21	16	0.06	1	1	0	0	0	0	0	0
............................................................................................................................................................................................TCACAGCATTGACATATCCTACAGC..................................................................................................	25	16	0.06	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................TTGACATATCCTACAGCAGATCGATT.........................................................................................	26	16	0.06	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................CACAGCATTGACATATCCTACAGCA.................................................................................................	25	16	0.06	1	1	0	0	0	0	0	0
............................................................................................................................................................................................TCACAGCATTGACATATCCTA......................................................................................................	21	16	0.06	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................TGTCACAGCATTGACATATCCTACAGC..................................................................................................	27	16	0.06	1	1	0	0	0	0	0	0
.....ACA--------CGCTGGCTACAGGCAGTCC....................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGAAATGTTCTGCGGTCTTCTAGAGC..........................................	26	20	0.05	1	1	0	0	0	0	0	0
..TCAACA--------CGCTGGCTACAGG..........................................................................................................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATGTTCTGCGGTCTTCTAGAG...........................................	21	20	0.05	1	0	0	0	0	1	0	0
.....................................................................................................................................................................GCCTCTTATCATAACGCTGGATG...........................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
.GTCAACA--------CGCTGGCTACAGG..........................................................................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
........................................................................................................................................................................TCTTATCATAACGCTGGATGTCACAT.....................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................................TCTGATCACCTGCCTCTTATCATAACGCT................................................................................................................................	29	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................ATCGATTGATAACCAGACACAC..........................................................................	22	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................TGCTTCCATAACATCG-----GCTCC.......................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.......................TACAGGCAGTCCTACTCGG.............................................................................................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATGTTCTGCGGTCTTCTAGAGCAATC......................................	26	20	0.05	1	1	0	0	0	0	0	0
................CGCTGGCTACAGGCAGTCCTACT................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTAGAAATGTTCTGC.......................................................	18	20	0.05	1	1	0	0	0	0	0	0
........................................................................................GTAACGAAAGGCGTTCTCGATAT........................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
...................................................................................TTGCAGTAACGAAAGGCGTTC...............................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0	0
....AACA--------CGCTGGCTACAGGCAGTCC....................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
.............................................................GGAACTCCAAGCTGCATTGATTTTG.................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................................T----CATGCTTCCATAACATCG-----GC..........................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.................................................................................................................................................GATCTCAGCTCTGATCACC...................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGATATT----C..................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................TT----CATGCTTCCATAACATCG-----G...........................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.............................................................................TTGATTTTGCAGTAACGAAAGGCGTTC...............................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
.............................................................................................................................................................GATCACCTGCCTCTTATCATAACGCT................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................GAGCAATCTCTGTATCTTGAT.........................	21	20	0.05	1	1	0	0	0	0	0	0
....AACA--------CGCTGGCTACAGGCAGTCCT...................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................CCTCTTATCATAACGCTGGATGTCACAT.....................................................................................................................	28	20	0.05	1	1	0	0	0	0	0	0
....AACA--------CGCTGGCTACAGGCAGTC.....................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
............................................................................................................................................................................ATCATAACGCTGGATGTCACA......................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TAGAAATGTTCTGCGGTCTTC................................................	21	20	0.05	1	1	0	0	0	0	0	0
..TCAACA--------CGCTGGCTACAGGCAGTCCTA..................................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACA...........................................................................	22	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................AAGGCGTTCTCGATATT----CATGC..............................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................CGGTCTTCTAGAGCAATCTCT...................................	21	20	0.05	1	0	0	0	1	0	0	0
............................................................................................................................CATAACATCG-----GCTCCTGATCTCAG..............................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATGTTCTGCGGTCTTCTAGAGCAATCT.....................................	27	20	0.05	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGAAATGTTCTGCGGTCTTCTAG.............................................	23	20	0.05	1	1	0	0	0	0	0	0
.................................CCTACTCGGTATC-CGTACGG.................................................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................CTTAGAAATGTTCTGCGGTC...................................................	20	20	0.05	1	1	0	0	0	0	0	0
...........................................................................CATTGATTTTGCAGTAACGAAAGGCGT.................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGATT.........................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGATTGATAACCAGACACACCAAC......................................................................	25	20	0.05	1	1	0	0	0	0	0	0
.....................GCTACAGGCAGTCCTACTCGGTATC-CG......................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................GAGCAATCTCTGTATCTTGA..........................	20	20	0.05	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GGTCTTCTAGAGCAATCTCTG..................................	21	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................ACCAGACACACCAACTTAGAAATGTTC..........................................................	27	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................TATCTTGATATAGAAATCAACTCAGAAG......	28	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................................TAACATCG-----GCTCCTGATCTCA...............................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
................CGCTGGCTACAGGCAGTCCTA..................................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
...................TGGCTACAGGCAGTCCTACTCGG.............................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TCTGCGGTCTTCTAGAGCAATCT.....................................	23	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TCTTCTAGAGCAATCTCTGTA................................	21	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................TT----CATGCTTCCATAACATCG-----GCT.........................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
............................................................................................................................................................TGATCACCTGCCTCTTATCATAACGC.................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................GATCGATTGATAACCAGACACACCAACAC....................................................................	29	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TTCTGCGGTCTTCTAGAGCAATCTCT...................................	26	20	0.05	1	1	0	0	0	0	0	0
...........................................................................................................................................................................TATCATAACGCTGGATGTCAC.......................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
...................................................................CCAAGCTGCATTGATTTTG.................................................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CACCAACTTAGAAATGTTCTGCGG.....................................................	24	20	0.05	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................TGATAACCAGACACACCAACTTAGAAA...............................................................	27	20	0.05	1	1	0	0	0	0	0	0
..........................................................AGAGGAACTCCAAGCTGCATT........................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................TTAGAAATGTTCTGCGGTCTTCTAGAG...........................................	27	20	0.05	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................................................................AGAAATGTTCTGCGGTCTTCTAGAGCA.........................................	27	20	0.05	1	1	0	0	0	0	0	0
.............................................................................................................................................TCCTGATCTCAGCTCTGATCA.....................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
..TCAACA--------CGCTGGCTACAGGCAG.......................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCC.................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
............................................................................................................................................CTCCTGATCTCAGCTCTGATCA.....................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
............................................................AGGAACTCCAAGCTGCATTGG......................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................GCAGTAACGAAAGGCGTTCTCG............................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGATAA........................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................AACTTAGAAATGTTCTGCGG.....................................................	20	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TTCTGCGGTCTTCTAGAGCAATCTC....................................	25	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGA....................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1	0
...........................................................................................................ATATT----CATGCTTCCATAACAT...................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGAC...................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................CCTCTTATCATAACGCTGGATGTCAT.......................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
............................................................................................................................................CTCCTGATCTCAGCTCTGATC......................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TGCGGTCTTCTAGAGCAATCTCTGC.................................	25	20	0.05	1	1	0	0	0	0	0	0
....................................ACTCGGTATC-CGTACGGTAG..............................................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
...........................................................................................................ATATT----CATGCTTCCATAACATCG-----G...........................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................................T----CATGCTTCCATAACATCG-----GCT.........................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................................TGGATGTCACAGCATTGAC..............................................................................................................	19	20	0.05	1	1	0	0	0	0	0	0
......................................................................................CAGTAACGAAAGGCGTTCTCGA...........................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TAGAAATGTTCTGCGGTCTTCTAGAGC..........................................	27	20	0.05	1	1	0	0	0	0	0	0
......CA--------CGCTGGCTACAGGCAGTCCTAC.................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................ATCGATTGATAACCAGACACACCAAC......................................................................	26	20	0.05	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TGTTCTGCGGTCTTCTAGAGCAATCTCT...................................	28	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TAGAAATCAACTCAGAAGAAG...	21	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................TATCTTGATATAGAAATCAACTCAAT........	26	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................AGCAGATCGATTGATAACCAGACAC............................................................................	25	20	0.05	1	1	0	0	0	0	0	0
.............................................................................................................ATT----CATGCTTCCATAACATCG-----............................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0	0
............................................................................ATTGATTTTGCAGTAACGAAAGGCG..................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0	0
..................................CTACTCGGTATC-CGTACGGT................................................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
......CA--------CGCTGGCTACAGGCAGTCCTACAT...............................................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
....................................................................................................................................................................TGCCTCTTATCATAACGCTGGATGT..........................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ACTTAGAAATGTTCTGCGGT....................................................	20	20	0.05	1	1	0	0	0	0	0	0
........................................................................................................................................................................TCTTATCATAACGCTGGATGT..........................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
..............................................................................TGATTTTGCAGTAACGAAAGG....................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCTAC...............................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGT....................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................TT----CATGCTTCCATAACATCG-----GCTCCT......................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
.............................................................................................................................................................................TCATAACGCTGGATGTCACA......................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
....AACA--------CGCTGGCTACAGGCAGTCCTA..................................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................................................................CTTATCATAACGCTGGATGTCACAGCA...................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
........................ACAGGCAGTCCTACTCGGTATC-CGT.....................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0	0
......................................................................................................................................................................CCTCTTATCATAACGCTGGATGT..........................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................ATCG-----GCTCCTGATCTCAGCT............................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
.................................................................CTCCAAGCTGCATTGATTTTG.................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
....................................................................................................................................................................TGCCTCTTATCATAACGCTGGATG...........................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
...............................................................................GATTTTGCAGTAACGAAAGGC...................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................................................TTATCATAACGCTGGATGTCACAT.....................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TTAGAAATGTTCTGCGGTCTT.................................................	21	20	0.05	1	1	0	0	0	0	0	0
...CAACA--------CGCTGGCTACAGGCAGTCCTA..................................................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................CTGTATCTTGATATAGAAATCA...............	22	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................CCTCTTATCATAACGCTGGATG...........................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
................................................................................................................................................................................TAACGCTGGATGTCACAGCATTGACAT............................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................GTCTTCTAGAGCAATCTCTGTATCT.............................	25	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................CCTCTTATCATAACGCTGGA.............................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATGTTCTGCGGTCTTCTAGAGCAAAA......................................	26	20	0.05	1	1	0	0	0	0	0	0
......CA--------CGCTGGCTACAGGCAGTCCTACTCT..............................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
...........................................................................................................................................................................TATCATAACGCTGGATGTCACAGC....................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TGCGGTCTTCTAGAGCAATCTCT...................................	23	20	0.05	1	0	0	0	0	1	0	0
..............................AGTCCTACTCGGTATC-CGTAC...................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................ATCG-----GCTCCTGATCTCAGCTCT..........................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................TCCATAACATCG-----GCTCCTGATCTCT...............................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
.....ACA--------CGCTGGCTACAGGCAGTCCT...................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................TTCCATAACATCG-----GCTCCTGG....................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
................................................................................................................................................TGATCTCAGCTCTGATCACC...................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................AGTAACGAAAGGCGTTCTCG............................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	1	0	0
.................................................................................................................................................................ACCTGCCTCTTATCATAACGCTGGACT...........................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................ATCTTGATATAGAAATCAACTCAGA........	25	20	0.05	1	1	0	0	0	0	0	0
............................................................................ATTGATTTTGCAGTAACGAAAGGC...................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0	0
...CAACA--------CGCTGGCTACAGGCAG.......................................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................................................AGCTCTGATCACCTGCCTCTTATC........................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
..............................................................................TGATTTTGCAGTAACGAAAGGCGTT................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGAAATGTTCTGCGGTCTTCTAGAGCAATA......................................	30	20	0.05	1	0	0	0	0	0	0	1
.........................................................................................................................TTCCATAACATCG-----GCTCCTGATCTCAGT.............................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................................GCTTCCATAACATCG-----GCTCC.......................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................................TAACATCG-----GCTCCTGATCT.................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0	0

dvi_21404

scaffold_13324:1485207-1485349 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-10.3	-10.1