dvi_21330

Name	Class	Family	Strand
NOMAD_I-int	LTR	Gypsy	-

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ATCAGTGCTTCAAGAGTCTTCAAAGTATCATTGCCGATGTTCCCATTAAAGTAAGTTAGACCAGGAAGGTCAAGAAAGGTGAGAACGGTAGCGTTCCCGATTAATTTGAAGAATTGACCTACGAGGCGATGCGTAATTTTAACGCCGCCAGCAGCAGATTGGACAAAGAAGGGAGTAGGTAGTGGAGTGCAACTGGCAGAGATTTTTGGGCTAACAACATTTTTATTTGCACAGGTATCGATAAGAAAGTG ************************************************........((((.....))))..............((((.(((((((...(((((((...)))))))(((((..((((..((((.......))))))))..(((....))).............)))))....))))))).))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V053 head	SRR060686 Argx9_0-2h_embryos_total	SRR060684 140x9_0-2h_embryos_total	SRR060682 9x140_0-2h_embryos_total	SRR060685 9xArg_0-2h_embryos_total	SRR060660 Argentina_ovaries_total
.......................................................................................................................................................................TGAGGGAGTAGGTTGTGGAGT...............................................................	21	3	2	1.00	2	2	0	0	0	0	0
.....................................................................TCAAGAAAGGTGAGAACGGTA.................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................TGAGGGAGTAGGTTGTGGAG................................................................	20	3	7	0.43	3	3	0	0	0	0	0
................................................................GAAGGTCAGGAAAGGTCAAA.......................................................................................................................................................................	20	3	6	0.17	1	0	0	1	0	0	0
................................................................GAAGGTCAGGAAAGGTCA.........................................................................................................................................................................	18	2	6	0.17	1	0	0	0	1	0	0
......................GAGTATCAATGCCGACGTT..................................................................................................................................................................................................................	19	3	13	0.08	1	0	0	0	0	1	0
......................................................................................................................................................................................TGGAGTGCAATTAGCAGA...................................................	18	2	13	0.08	1	0	0	1	0	0	0
.....................................................................................................................................................................................ATGGAGTGCAATTGGGAGAG..................................................	20	3	14	0.07	1	0	0	0	0	0	1

TAGTCACGAAGTTCTCAGAAGTTTCATAGTAACGGCTACAAGGGTAATTTCATTCAATCTGGTCCTTCCAGTTCTTTCCACTCTTGCCATCGCAAGGGCTAATTAAACTTCTTAACTGGATGCTCCGCTACGCATTAAAATTGCGGCGGTCGTCGTCTAACCTGTTTCTTCCCTCATCCATCACCTCACGTTGACCGTCTCTAAAAACCCGATTGTTGTAAAAATAAACGTGTCCATAGCTATTCTTTCAC ************************************************........((((.....))))..............((((.(((((((...(((((((...)))))))(((((..((((..((((.......))))))))..(((....))).............)))))....))))))).))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V053 head	SRR060682 9x140_0-2h_embryos_total	M027 male body	M047 female body	V116 male body	SRR060686 Argx9_0-2h_embryos_total	SRR060666 160_males_carcasses_total	V047 embryo
........................CGTAGTAATGGCTACAGGGG...............................................................................................................................................................................................................	20	3	2	0.50	1	1	0	0	0	0	0	0	0
........................CCTGGTAACTGCTACAAGGG...............................................................................................................................................................................................................	20	3	4	0.25	1	1	0	0	0	0	0	0	0
...........................................GTAATTTCATTCGACCTTGTC...........................................................................................................................................................................................	21	3	4	0.25	1	0	1	0	0	0	0	0	0
............................GTAACGGCGATAAGGGTA.............................................................................................................................................................................................................	18	2	10	0.10	1	0	0	0	1	0	0	0	0
..........................................................................TTACCCCTCTTGCGATCGC..............................................................................................................................................................	19	3	12	0.08	1	0	0	0	0	1	0	0	0
..............TCAGAAGTTTCAAAGTAAA..........................................................................................................................................................................................................................	19	2	14	0.07	1	0	0	1	0	0	0	0	0
................AGCAGATGCATAGTAACGG........................................................................................................................................................................................................................	19	3	15	0.07	1	0	0	0	0	0	1	0	0
...TCACCATTTTCTCAGAAGT.....................................................................................................................................................................................................................................	19	3	19	0.05	1	0	0	1	0	0	0	0	0
....................GTTGCATAGTAACGGGAAC....................................................................................................................................................................................................................	19	3	20	0.05	1	1	0	0	0	0	0	0	0
............TCTCCGAAGTTTCTTAGCA............................................................................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	0	1	0
.................................................ACATTCATTCTGGACCTTC.......................................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droVir3	scaffold_13050:2142620-2142870 +	dvi_21330	ATCAGTGCTTCAAGAGTCTTCAAAGTATCATTGCCGATGTTCCCATTAAAGTAAGTTAGACCAGGAAGGTCAAGAAAGGTGAGAACGGTAGCGTTCCCGATTAATTTGAAGAATTGACCTACGAGGCGATGCGTA-ATTTTAAC--GCCGCCAGCAGCAGATTGGACAAAGAAGGGAGTAGGTAGTGGAGTGCAACTGGCAGAGATTTTTGGGCTAACAACATTTTTATTTGCACAGGTATCGATAAGAAAGTG
droMoj3	scaffold_4016:332-582 +		ATTATAGCCTTTAGATTTTTTAGAGTATCGTCACCTATAATTCCATCAAAACTTTGTAACCCCGGGAGTACATAAAAGGTGATTAGAATATCATTCCTCATCGAAGCAAAGAACGAACCAACAAGTTTATGTTTA-ATAAGAAT--GTTTCCTCCTGCTGATTGCACGTGAAATGGTTTCTCAAGTGTTATGCAACCATCTGCTAATTTTGAACTTATGAAATTTTTGTTTGTTCCTGTATCAACTAAAAACTC
droWil2	scf2_1100000004888:329359-329609 +		ATTTTCGCTTTCAATTTCTTTAGTGTATCATCTCCTATTATGCCATCGAAACTTTTTAAATTAGGAAGAGTAAAGAAGGTTAGTGGAATATCATTACCCAGAGGAGCAATGAATGGTCCATTGAGGTATTGTGAA-ATTTTTAT--TGGTCCATTTGCTGATTGTACTAAGAAGGGCTTTTGTAGTTGAATAGCACCCTCTGAAAGATCTAGACTAATGAAGTTTTTGTTTGCGCCAGTGTCGATTAAAAACTG
droAna3	scaffold_13258:1305687-1305924 +		ATTAGGGCTTTCGCTTCCTTAAGAGTATCGTCACCAATGATTCCATCGAAGGAAT-------------TCCCAAGAAGGTGGTAATCAAGTTATTACCGATGGGCTCAAAGAATCGTCCTACTAGGCAACGCGTG-ATTTTAAC--CTTGCCAGCAGCAGATTGAACGTAAAAGGGAGTAGGTAAGAGGGTGGAACCGGCGGAGTGTTTTTGGCTAACAAAGTTCTTATTCGCGCCGGTATCGATAAGAAACTT
droKik1	scf7180000299648:30511-30754 +		ATAATTGCCTTAACGGATTTTAAAGTGTCGTCCCCAGTAATGCCATGGAGGGCAATTAAACCGGGAAGAACGAAGAAGGTGAC------ATAATTGCCAATGGGGCTAAAAAATGGTCGGGTAAGCTGGTGCCTT-TTTTTTAT--CTCCCCTTCCGCGGATTGAACCGGGAAGGGTTTCGGCAAGGGATTGCATCCCTTGGCTA-TCTGGGGCTAATGAAGTTCTTATTCGCTCCAGTATTTATAAGTTAATT
droFic1	scf7180000453645:545-795 -		ATCAGGGCTTTTAAAGTTCTTAGGGTGTCGTCTCCTATGATGCCGTCAAATGATGTTAGTCCAGGAAGGACAAAAAAGGTGAGAACGGTATCGTTCCCAATCGGCTTAAAAAATTGTCCAGTGATACAATGTGTT-ATTCTTAT--ATTACCCCCCGCGGACTGAACGACAAACGGTGTTGGTAATGCTATAGAGCCGGCGGAGTTCTTGGGGCTTATAAAATTGTTGTTAGCGCCGGTGTCTATAAGAAATTG
droEle1	scf7180000490355:828-1080 +		ATCAGGGCTTTTAGGGCTTTCAATGTGTCGTCCCCTATAATGCCGTCGAAAGATTTTAGACCCGGGAGTACAAAAAAGGTGAGAACAGTGTTGTTCCCCATTGGCTTAAA-AATTGTCCTGTGATACAGTGTGTGTATTTTTATGTTATATCCCCAGCGGATTGTACAGAAAAAGGCGTTAAAAGTGTTTTTGAACCGGCGGAGTTTTTGGGGCTAATAAAATTATTGTTAGCGCCGGTGTCTATCAGGAATTG
droRho1	scf7180000760382:2420-2670 +		ATAAGGACCTTTAATGTTTTTAAAGTGTCGTCTCCTATAATGCCGTCAAATGATTTGAGTCCGGGAAGGGCAAAAAATGTGACAACTGTATCGTTCCCTATTGGTTTAAAAAATGGTCCCGTTATACTGTGTGTG-ATTTTAAT--GTCACCCCCAGCAGATTGGACAATGAACGGTGTAGATAATGTCGTGGAACCGGCGGAATTTTTGGGGCTTATAAAGTTGTTGTTAGCGCCGGTATCTATGAGGAATTG
droBia1	scf7180000302405:86082-86303 -		T------------------TTAAAGTTTCATCCCCAATAATGCCATGAAAGGCAGTTAAATCGGGAAG------AAAGGTAATCGGAGAGTCATTACGTATGGGCCTGCAAAGAGGTC-----AGTTGATGAGTT-ATTTGTAT--CTCCCCTCCAGCGGATTGGACTGGGAAGGATTTCGACAAGGGCTTGCATCCGTTGGTTATCTGGTGGTTAATGAAGTCCTTATTCGCGCCAGTGTCTATCAGAAACTG
droTak1	scf7180000412215:1591-1841 +		ATTATTGCATTTAAGGTTTTTAATGTGTCATCCCCGATAATACCATGGAAGGCGGTAAGGCCGGGGAGGACAAAAAATTCAATAGAGGAATTGTTGCCTACTGGCTTAAAGAAGGGTCCGGTTACTTGGTGGGTT-ATTTTTAT--ATCCCCTGCTGCGGATTGGACTTTAAAAGGTTTGGGCAAGGGAGTGCAACCCTTGGCTATTTGGGGGCTAATGAAATTTTTATTTGCGCCAGTATCTACGAGAAATGG
droEug1	scf7180000405716:23112-23362 +		ATCAGGGCTTTTAAAGTTTTTAGGGTGTCGTCTCCTATGATGCCGTCAAATGATGTTAGTCCGGGAAGGACAAAAAAGGTGAGAACGGTATTGTTCCCAATCGGCTTAAAAAATTGTCCAGTGATACAATGCGTT-ATTTTAAC--ATTACCCCCTGCGGACTGAACGACAAACGGTGGGGGTAATGCTATAGAGCCGGCGGAGTTCTTTGGGCTTATAAAATTATTGTTAGCACCGGTGTCTATTAGAAATTG
dm3	chrUextra:1037717-1037967 +		ATCAAGGCTTTTAATTCCTTAAGCGTATCGTCACCAATTATTCCGTCGAAGGAATTTAATCCAGGTAACACGAAAAATGTGAGAAGTAAGTCATTGCCAATTTTTTTAAAAAACTGCCCCACAAGTTGACGTGTG-ATTTTTAC--GCAACCTGTGGCAGACTGGACAAAGAATGGTGTTGTTAAAGGAGTTGAACCGGCAGCGATTTTTGGGCTAATAAAATTTTTATTTGCGCCGGTGTCAACTAGGAATTG
droSim2	node_49469:891-1141 +		ACTATGGCTTTTAAGTCTTTGAGAGTATCGTCGCCAATGATACCATCAAAGGAATGTAAATTCGGTAGTACGAAAAAGGTAATATCCGAGTCGTTCCCTAGTGGTTTGAAGAATTTACCAACTAGGCGGTGCGTT-ATCATGAT--GTTACCCGCAGCGGACAGTACGGAGAAGGGTTTACGGACTGTGGTACACCCGGCTGCAAGTCTTCGGCTAATAAAGTTTTTGTTCGCCCCCGTGTCGATCAAAAACTT
droSec2	scaffold_12660:849-1098 -		ACTACTGCTTTCAA-GTCTTGAGCGTGTCGTCCCCTATGATGCCATCGAAGGTATCTAAACCGGGGAGGACAAAAAAGGTGAGGGTCGAGTCATTCCCTAGTTTTTCGAAAAATTTTCCGGCTACGCGGCGTGTT-ATTCTAAC--AGAACCTGTGGCCGATTGAACGCAAAAGGGAGTAGGGAGGATAGTCGATCCGGCGGCGATTTTGGGGCTGATGAAGTTTTTGTTAGCGCCGGTATCGATCAAGAATTG
droYak3	v2_chr3h_random_002:808969-809219 +		ATGAGGGCATTAACTGCCTTCAGGGTATCATCGCCAATGATCCCATCGAAGGAACGCAAACTTGGAAGGACAAAAAAGGTGGTGGTCGTATTGTTGCCTAATTCTTAGAAATATTTTCCTTCAAGGCTATGGGTA-ATTCTCAA--TGTGCCCGCGGCGGACTGGACATCAAAAGGAGTGCGAAGGGGTTTCGAACCGGTGGCAATTTTGGGGCTAATGAAGTTTTTATTTGCACCGGTGTCTATAAGGAAGTG
droEre2	scaffold_4845:533388-533632 -		ATCAGGGCTTTTAATGCCTTGAGGGTATCATCGCCTATCATATCGTTACAGGAGCTTAGTCCGGGAAGGACAACGAAGGTGAGAACTATATTGTTTCCAATTGTATTAAAAAATGGTCCGGTAAGACGTTGCGTG-AATTTCAT--AGCGCCCGCAG-AGACTGGACAA-----AGGGTGTTGAGGGTTTTTGCACCGGCAGAATTTCTGGAGCTTACACAATTCTTATTAGCGCCGGTGTCTATGAGGAATTG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

ATCAGTGCTTCAAGAGTCTTCAAAGTATCATTGCCGATGTTCCCATTAAAGTAAGTTAGACCAGGAAGGTCAAGAAAGGTGAGAACGGTAGCGTTCCCGATTAATTTGAAGAATTGACCTACGAGGCGATGCGTA-ATTTTAAC--GCCGCCAGCAGCAGATTGGACAAAGAAGGGAGTAGGTAGTGGAGTGCAACTGGCAGAGATTTTTGGGCTAACAACATTTTTATTTGCACAGGTATCGATAAGAAAGTG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....................................................................TCAAGAAAGGTGAGAACGGTA....................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATTATAGCCTTTAGATTTTTTAGAGTATCGTCACCTATAATTCCATCAAAACTTTGTAACCCCGGGAGTACATAAAAGGTGATTAGAATATCATTCCTCATCGAAGCAAAGAACGAACCAACAAGTTTATGTTTA-ATAAGAAT--GTTTCCTCCTGCTGATTGCACGTGAAATGGTTTCTCAAGTGTTATGCAACCATCTGCTAATTTTGAACTTATGAAATTTTTGTTTGTTCCTGTATCAACTAAAAACTC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............TTTTTTAGAGTATCGTCACCT..........................................................................................................................................................................................................................	21	3	1.00	3	0	0	0	0	0	3
....................................................................................................................................................TTCCTCCTGCTGATTGCACGT.....................................................................................	21	4	0.50	2	1	0	0	0	0	1
.................................................................................................................................................................TTGCACGTGAAATGGTTTCTC........................................................................	21	4	0.50	2	0	0	0	0	0	2
............................................................CCCGGGAGTACATAAAAGGTG.............................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	1
........................................................................................................................................................................TGAAATGGTTTCTCAAGTGTT.................................................................	21	5	0.40	2	0	0	0	0	0	2
................TTTTTAGAGTATCGTCACCTA.........................................................................................................................................................................................................................	21	3	0.33	1	0	0	0	0	0	1
.............................................TCAAAACTTTGTAACCCCGGG............................................................................................................................................................................................	21	3	0.33	1	1	0	0	0	0	0
......................................................................................................................................A-ATAAGAAT--GTTTCCTCCTGC................................................................................................	21	4	0.25	1	0	0	0	0	0	1
...................................................................................................................................................TTTCCTCCTGCTGATTGCACG......................................................................................	21	4	0.25	1	0	0	0	0	0	1
...................................................................................................................................TTTA-ATAAGAAT--GTTTCCTCC...................................................................................................	21	4	0.25	1	0	0	0	0	0	1
.....................................................................................................................................TA-ATAAGAAT--GTTTCCTCCTG.................................................................................................	21	4	0.25	1	0	0	0	0	0	1
.............................................................................................................................................................CTGATTGCACGTGAAATGGTT............................................................................	21	4	0.25	1	0	0	0	0	0	1
...............................................................................................................................................T--GTTTCCTCCTGCTGATTGCA........................................................................................	21	4	0.25	1	1	0	0	0	0	0
..........................................................................................................................................................................AAATGGTTTCTCAAGTGTTAT...............................................................	21	5	0.20	1	0	0	0	0	0	1
............................................................................................................................................................................ATGGTTTCTCAAGTGTTATGC.............................................................	21	5	0.20	1	0	0	0	0	0	1
.....................................................................................................................................................................................CAAGTGTTATGCAACCATCT.....................................................	20	5	0.20	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................TTTTGTTTGTTCCTGTAC.............	18	7	0.14	1	0	0	0	0	1	0
................................................................................................................................................................................................................................TTTGTTTGTTCCTGTATCAA..........	20	7	0.14	1	0	0	0	0	0	1

droWil2

ATTTTCGCTTTCAATTTCTTTAGTGTATCATCTCCTATTATGCCATCGAAACTTTTTAAATTAGGAAGAGTAAAGAAGGTTAGTGGAATATCATTACCCAGAGGAGCAATGAATGGTCCATTGAGGTATTGTGAA-ATTTTTAT--TGGTCCATTTGCTGATTGTACTAAGAAGGGCTTTTGTAGTTGAATAGCACCCTCTGAAAGATCTAGACTAATGAAGTTTTTGTTTGCGCCAGTGTCGATTAAAAACTG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
......................................................................................................................................................................................................TCTGAAAGATCTAGACTAATGAAGT...............................	25	6	4.33	26	0	0	0	26	0
...........................................................................................................................................................TGCTGATTGTACTAAGAAGGGCTTT..........................................................................	25	12	2.25	27	0	1	0	26	0
......................................................................................................................................................................................TAGTTGAATAGCACCCTCTGAAAGATC.............................................	27	5	2.20	11	0	7	1	3	0
.............................................................................................................TGAATGGTCCATTGAGGTATTGTGA........................................................................................................................	25	1	2.00	2	0	0	0	2	0
........................................................................................................................................................................................................TGAAAGATCTAGACTAATGAAGTTTT............................	26	6	1.67	10	0	1	0	9	0
....................................................TTTTTAAATTAGGAAGAGTAAAGAAGG...............................................................................................................................................................................	27	7	1.57	11	0	1	0	10	0
......................................................................................................................................................................................................................TAATGAAGTTTTTGTTTGCGCCAGTG..............	26	9	1.44	13	0	1	0	12	0
..................................................................................................................................................................................................................................TGTTTGCGCCAGTGTCGATTAAAAAC..	26	6	1.33	8	0	1	0	7	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTTTGTAG.....................................................................	27	7	1.29	9	0	1	0	8	0
.......................................................................................................................................................CATTTGCTGATTGTACTAAGAAGGGC.............................................................................	26	8	1.25	10	0	1	0	9	0
.........................................................................................................................................................................................................................TGAAGTTTTTGTTTGCGCCAGTGTCGA..........	27	8	1.00	8	0	1	1	6	0
.........................................................................................................................TGAGGTATTGTGAA-ATTTTTAT--TGGTC.......................................................................................................	27	1	1.00	1	0	0	0	1	0
...................................................................................................................................TGAA-ATTTTTAT--TGGTCCATTTGCTGA.............................................................................................	27	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................TAATGAAGTTTTTGTTTGCGCCAGT...............	25	9	1.00	9	0	4	0	5	0
.................................................................................................................................TGTGAA-ATTTTTAT--TGGTCCATTTG.................................................................................................	25	1	1.00	1	0	1	0	0	0
.............................................................TAGGAAGAGTAAAGAAGGTTAGTGG........................................................................................................................................................................	25	4	1.00	4	0	3	0	1	0
....................TAGTGTATCATCTCCTATTATGCCAT................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0
...................................................................................TGGAATATCATTACCCAGAGGAGC...................................................................................................................................................	24	9	0.89	8	0	1	0	7	0
.................................................................................................................................................................TTGTACTAAGAAGGGCTTTTGTAGTT...................................................................	26	7	0.86	6	0	0	1	5	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAAGATCTAGAC........................................	28	6	0.83	5	2	3	0	0	0
...........................................................................................................................................................TGCTGATTGTACTAAGAAGGGCTTTTG........................................................................	27	12	0.75	9	0	4	0	5	0
..................................................................................................................................................................TGTACTAAGAAGGGCTTTTGTAGT....................................................................	24	7	0.71	5	0	2	0	3	0
.....................................................TTTTAAATTAGGAAGAGTAAAGAAGG...............................................................................................................................................................................	26	7	0.71	5	0	0	0	5	0
................................................................................TAGTGGAATATCATTACCCAGAGGAGC...................................................................................................................................................	27	6	0.67	4	0	1	0	3	0
.................................................................................................................................................................................................................TAGACTAATGAAGTTTTTGTTTGCGC...................	26	9	0.67	6	0	1	0	5	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAAGATCTAGA.........................................	27	6	0.67	4	0	3	0	1	0
.........................................................................................................................................................................................TTGAATAGCACCCTCTGAAAGATCTAGAC........................................	29	6	0.67	4	4	0	0	0	0
........................................................................................................................................................................................................TGAAAGATCTAGACTAATGAAGTTT.............................	25	6	0.67	4	0	3	0	1	0
......................................................................................................................................................................................................................TAATGAAGTTTTTGTTTGCGCCAG................	24	9	0.67	6	0	3	0	3	0
......................................................................................................................................................................................TAGTTGAATAGCACCCTCTGAAAGA...............................................	25	5	0.60	3	0	2	0	1	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTTTGTAGT....................................................................	28	7	0.57	4	0	2	1	1	0
........................................................TAAATTAGGAAGAGTAAAGAAGGTT.............................................................................................................................................................................	25	7	0.57	4	0	1	1	2	0
......................................................................................................................................................................................................................TAATGAAGTTTTTGTTTGCGCCAGTGT.............	27	9	0.56	5	0	1	0	4	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTTTG........................................................................	24	13	0.54	7	0	1	0	6	0
.........................................................................................................................................................................................................................TGAAGTTTTTGTTTGCGCCAGTGTCGAT.........	28	8	0.50	4	0	3	0	1	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTTTGT.......................................................................	25	13	0.46	6	0	1	0	5	0
....................................................TTTTTAAATTAGGAAGAGTAAAGA..................................................................................................................................................................................	24	7	0.43	3	0	0	0	3	0
....................................................TTTTTAAATTAGGAAGAGTAAAGAA.................................................................................................................................................................................	25	7	0.43	3	0	0	0	3	0
.................................................................................................................................................................TTGTACTAAGAAGGGCTTTTGTAG.....................................................................	24	7	0.43	3	0	1	1	1	0
.................................................................................................................................................................TTGTACTAAGAAGGGCTTTTGTAGT....................................................................	25	7	0.43	3	0	1	0	2	0
..................................................................................................................................................................................TTTGTAGTTGAATAGCACCCTCTGA...................................................	25	5	0.40	2	0	1	0	1	0
...............................................................................................................................................................................................................................TTTTGTTTGCGCCAGTGTCGATTAAAA....	27	8	0.38	3	0	0	0	3	0
.......................................................................................................................................................CATTTGCTGATTGTACTAAGAAGGGCT............................................................................	27	8	0.38	3	0	3	0	0	0
.......................................................................................................................................................................................................CTGAAAGATCTAGACTAATGAAGT...............................	24	6	0.33	2	0	2	0	0	0
...........................................................................................................................................................TGCTGATTGTACTAAGAAGGGCTTTT.........................................................................	26	12	0.33	4	0	0	0	4	0
.................................................................................................................................................................................................................................TTGTTTGCGCCAGTGTCGATTAAAAA...	26	6	0.33	2	0	0	0	2	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAAGATCTA...........................................	25	6	0.33	2	0	0	0	2	0
................................................................................................................................................................................................................................TTTGTTTGCGCCAGTGTCGATTAAAAA...	27	6	0.33	2	0	1	0	1	0
..................................................................................................................................................................................................................................TGTTTGCGCCAGTGTCGATTAAAAA...	25	6	0.33	2	0	0	0	2	0
.................................................................................................................................................................................................................................TTGTTTGCGCCAGTGTCGATTAAAAAC..	27	6	0.33	2	0	1	0	1	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAAGATCTAG..........................................	26	6	0.33	2	0	0	0	2	0
.........................................................................................................................................................................................................................TGAAGTTTTTGTTTGCGCCAGTGTC............	25	9	0.33	3	0	1	0	2	0
..................................................................................................................................................................................................................................TGTTTGCGCCAGTGTCGATTAAAAACT.	27	6	0.33	2	0	0	0	2	0
...........................................................................................................................................................TGCTGATTGTACTAAGAAGGGCTT...........................................................................	24	12	0.33	4	0	0	0	4	0
..................................................................................................................................................................TGTACTAAGAAGGGCTTTTGTAG.....................................................................	23	7	0.29	2	0	0	0	2	0
..................................................................................................................................................................TGTACTAAGAAGGGCTTTTGTAGTTGA.................................................................	27	7	0.29	2	0	1	0	1	0
....................................................................................................................................................................TACTAAGAAGGGCTTTTGTAGTTG..................................................................	24	7	0.29	2	0	0	0	2	0
.......................................................TTAAATTAGGAAGAGTAAAGA..................................................................................................................................................................................	21	7	0.29	2	0	0	0	2	0
......................................................................TAAAGAAGGTTAGTGGAATATCATT...............................................................................................................................................................	25	7	0.29	2	0	2	0	0	0
..................................................................................................................................................................TGTACTAAGAAGGGCTTTTGTAGTTG..................................................................	26	7	0.29	2	0	0	0	2	0
..........................................................................................................................................................TTGCTGATTGTACTAAGAAGG...............................................................................	21	8	0.25	2	0	0	0	2	0
.......................................................................................................................................................CATTTGCTGATTGTACTAAGAAGGG..............................................................................	25	8	0.25	2	0	1	0	1	0
.......................................................................................................................................................................TAAGAAGGGCTTTTGTAGTTGAATA..............................................................	25	8	0.25	2	0	0	0	2	0
..........................................................................................................................................................TTGCTGATTGTACTAAGAAGGGCTT...........................................................................	25	8	0.25	2	0	0	0	2	0
............................................................TTAGGAAGAGTAAAGAAGGTTAGTGGA.......................................................................................................................................................................	27	4	0.25	1	0	1	0	0	0
.........................................................................................................................................................TTTGCTGATTGTACTAAGAAGGGCTTT..........................................................................	27	8	0.25	2	0	0	0	2	0
..........................................................................................................................................................TTGCTGATTGTACTAAGAAGGGCTTT..........................................................................	26	8	0.25	2	0	0	0	2	0
..................................................................................................................................................................TGTACTAAGAAGGGCTTTTGTA......................................................................	22	13	0.23	3	0	0	0	3	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTTTGTA......................................................................	26	13	0.23	3	0	0	0	3	0
..................................................................................................................................................................................TTTGTAGTTGAATAGCACCCTCTGAAAG................................................	28	5	0.20	1	0	1	0	0	0
........................................................................................................................................................................................................TGAAAGATCTAGACTAATGAAGTTTTT...........................	27	5	0.20	1	0	0	0	1	0
........................................................................................................................................................................................................TGAAAGATCTAGACTAATGAAGTTTTTG..........................	28	5	0.20	1	0	1	0	0	0
....................................................................................................................................................................................TGTAGTTGAATAGCACCCTCTGAAAGATC.............................................	29	5	0.20	1	1	0	0	0	0
........................................................................AAGAAGGTTAGTGGAATATCATTACC............................................................................................................................................................	26	5	0.20	1	0	0	0	1	0
..................................................................................................................................................................................TTTGTAGTTGAATAGCACCCTC......................................................	22	5	0.20	1	0	1	0	0	0
....................................................................................................................................................................................TGTAGTTGAATAGCACCCTCTGAAAG................................................	26	5	0.20	1	0	1	0	0	0
..................................................................................................................................................................................TTTGTAGTTGAATAGCACCCTCTGAAA.................................................	27	5	0.20	1	0	0	0	1	0
......................................................................................................................................................................................TAGTTGAATAGCACCCTCTGAAAGAT..............................................	26	5	0.20	1	0	0	0	1	0
....................................................................................................................................................................................TGTAGTTGAATAGCACCCTCTGA...................................................	23	5	0.20	1	0	0	0	1	0
...........................................................................................................................................................................................GAATAGCACCCTCTGAAAGATCTAGAC........................................	27	6	0.17	1	0	1	0	0	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAA.................................................	19	6	0.17	1	0	1	0	0	0
.................................................................................AGTGGAATATCATTACCCAGAGGAGC...................................................................................................................................................	26	6	0.17	1	0	1	0	0	0
.........................................................................................................................................................................................TTGAATAGCACCCTCTGAAAGATCT............................................	25	6	0.17	1	0	0	0	0	1
............................................................................................................................................................................................................AGATCTAGACTAATGAAGTTTTTGTT........................	26	6	0.17	1	0	1	0	0	0
......................................................................................................................................................................................................................................TGCGCCAGTGTCGATTAAAAACTG	24	6	0.17	1	0	0	0	1	0
.............ATTTCTTTAGTGTATCATCTC............................................................................................................................................................................................................................	21	6	0.17	1	0	0	0	1	0
.............................................................................................................................................................................................................GATCTAGACTAATGAAGTTTTTGTT........................	25	6	0.17	1	0	0	0	1	0
........................................................................................................................................................................................................TGAAAGATCTAGACTAATGAAGTT..............................	24	6	0.17	1	0	0	0	1	0
....................................................................................................................................................................................................CCTCTGAAAGATCTAGACTAATGAAGT...............................	27	6	0.17	1	0	0	0	1	0
.........................................................................................................................................................................................TTGAATAGCACCCTCTGAAAGATCTAGA.........................................	28	6	0.17	1	0	0	0	1	0
..................................................................................................................................................................................................................................TGTTTGCGCCAGTGTCGATTAAAAACTG	28	6	0.17	1	0	1	0	0	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAAGA...............................................	21	6	0.17	1	0	0	0	1	0
.......................................................................................................................................................................................................CTGAAAGATCTAGACTAATGAAGTTT.............................	26	6	0.17	1	0	1	0	0	0
......................................................................................................................................................................................................TCTGAAAGATCTAGACTAATGAAGTT..............................	26	6	0.17	1	0	0	0	1	0
........................................................................................................................................................................................................TGAAAGATCTAGACTAATGAAG................................	22	6	0.17	1	0	0	0	1	0
...................................................................................................................................................................................................................................GTTTGCGCCAGTGTCGATTAAAAAC..	25	6	0.17	1	0	0	0	1	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAAGATC.............................................	23	6	0.17	1	0	0	0	1	0
....................................................................................................................................................................................................CCTCTGAAAGATCTAGACTAATGAAGTT..............................	28	6	0.17	1	0	0	0	1	0
.........................................................................................................................................................................................TTGAATAGCACCCTCTGAAAGA...............................................	22	6	0.17	1	0	0	0	1	0
.................................................................................................................................................................................................................................TTGTTTGCGCCAGTGTCGATTAAAAACT.	28	6	0.17	1	0	0	0	1	0
..............................................................................................................................................................................................TAGCACCCTCTGAAAGATCTAGACTAA.....................................	27	6	0.17	1	0	0	0	1	0
..............................................................................................................................................................................................TAGCACCCTCTGAAAGATCTAGAC........................................	24	6	0.17	1	0	0	0	1	0
...................................................................................................................................................................................TTGTAGTTGAATAGCACCCTCTGAAAA................................................	27	6	0.17	1	0	0	0	1	0
................................................................................TAGTGGAATATCATTACCCAGAGGAG....................................................................................................................................................	26	6	0.17	1	0	1	0	0	0
..........................................................................................................................................................................................TGAATAGCACCCTCTGAAAGAT..............................................	22	6	0.17	1	0	0	0	1	0
...........................................................................................................................................................................................GAATAGCACCCTCTGAAAGATC.............................................	22	6	0.17	1	0	1	0	0	0
.........................................................................................................................................................................................................GAAAGATCTAGACTAATGAAGTTTTTGT.........................	28	6	0.17	1	0	0	0	1	0
......................................................................................................................................................................................................TCTGAAAGATCTAGACTAATGAAGTTTT............................	28	6	0.17	1	0	0	0	1	0
................................................................................................................................................................................................................................TTTGTTTGCGCCAGTGTCGATTAAAAAC..	28	6	0.17	1	0	1	0	0	0
......................................................................................................................................................................................................TCTGAAAGATCTAGACTAATGAAGTTT.............................	27	6	0.17	1	1	0	0	0	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTT...........................................................................	21	13	0.15	2	0	0	2	0	0
....................................................................................................................................................................TACTAAGAAGGGCTTTTGTAGTTGATA...............................................................	27	7	0.14	1	0	0	0	1	0
....................................................................................................................................................................TACTAAGAAGGGCTTTTGTAGTT...................................................................	23	7	0.14	1	0	0	0	1	0
.................................................................................................................................................................TTGTACTAAGAAGGGCTTTTGTAGTTG..................................................................	27	7	0.14	1	0	0	0	1	0
..................................................................................................................................................................TGTACTAAGAAGGGCTTTTGTAGTT...................................................................	25	7	0.14	1	0	0	1	0	0
...............................................................................................................................................................GATTGTACTAAGAAGGGCTTTTGTAG.....................................................................	26	7	0.14	1	0	0	0	1	0
......................................................................TAAAGAAGGTTAGTGGAATATCAT................................................................................................................................................................	24	7	0.14	1	0	0	0	1	0
.....................................................TTTTAAATTAGGAAGAGTAAAGA..................................................................................................................................................................................	23	7	0.14	1	0	0	0	1	0
.......................................................TTAAATTAGGAAGAGTAAAGAAGGT..............................................................................................................................................................................	25	7	0.14	1	0	0	0	1	0
......................................................................TAAAGAAGGTTAGTGGAATATCA.................................................................................................................................................................	23	7	0.14	1	0	0	0	1	0
....................................................................................................................................................................TACTAAGAAGGGCTTTTGTAGTTGTG................................................................	26	7	0.14	1	0	0	0	1	0
....................................................................................................................................................................TACTAAGAAGGGCTTTTGTAGTTGA.................................................................	25	7	0.14	1	0	0	0	1	0
...........................................................ATTAGGAAGAGTAAAGAAGGT..............................................................................................................................................................................	21	7	0.14	1	0	1	0	0	0
.........................................................AAATTAGGAAGAGTAAAGAAG................................................................................................................................................................................	21	7	0.14	1	0	0	0	1	0
.....................................................TTTTAAATTAGGAAGAGTAAAGAAGGT..............................................................................................................................................................................	27	7	0.14	1	0	1	0	0	0
.......................................................................AAAGAAGGTTAGTGGAATATCAT................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0
........................................................TAAATTAGGAAGAGTAAAGAAGGT..............................................................................................................................................................................	24	7	0.14	1	0	1	0	0	0
..................................................ACTTTTTAAATTAGGAAGAGTAAAGAA.................................................................................................................................................................................	27	7	0.14	1	0	0	0	1	0
...............................................................................................................................................................................................................................TTTTGTTTGCGCCAGTGTCGATTAAA.....	26	8	0.13	1	0	0	0	1	0
............................................................................................................................................................................................................................AGTTTTTGTTTGCGCCAGTGTCGAT.........	25	8	0.13	1	0	0	0	1	0
........................................................................................................................................................ATTTGCTGATTGTACTAAGAAGGGC.............................................................................	25	8	0.13	1	0	0	0	1	0
.....................................................................................................................................................TCCATTTGCTGATTGTACTAAGAAGGGC.............................................................................	28	8	0.13	1	0	0	0	1	0
...........................................................................................................................................................................................................................AAGTTTTTGTTTGCGCCAGTGTCGA..........	25	8	0.13	1	0	0	0	1	0
..................................................................................................................................................................................................................................TGTTTGCGCCAGTGTCGATTA.......	21	8	0.13	1	0	0	0	1	0
..............................................................................................................................................................................................................................TTTTTGTTTGCGCCAGTGTCGATTA.......	25	8	0.13	1	0	0	0	1	0
..................................................................................................................................................................................................................................TGTTTGCGCCAGTGTCGAT.........	19	8	0.13	1	0	0	0	1	0
.................................................................................................................................................................................................................................TTGTTTGCGCCAGTGTCGATT........	21	8	0.13	1	0	0	0	1	0
...................................................................................TGGAATATCATTACCCAGAGGAGCAAA................................................................................................................................................	27	8	0.13	1	0	0	0	1	0
.........................................................................................................................................................TTTGCTGATTGTACTAAGAAGGGC.............................................................................	24	8	0.13	1	0	0	0	1	0
..........................................................................................................................................................TTGCTGATTGTACTAAGAAGGGCTTTTG........................................................................	28	8	0.13	1	0	1	0	0	0
...............................................................................................................................................................................................................TCTAGACTAATGAAGTTTTTGTTTG......................	25	8	0.13	1	0	0	0	1	0
..........................................................................................................................................................TTGCTGATTGTACTAAGAAGGGC.............................................................................	23	8	0.13	1	0	0	0	1	0
........................................................................................................................................................................................................................ATGAAGTTTTTGTTTGCGC...................	19	9	0.11	1	0	1	0	0	0
...................................................................................TGGAATATCATTACCCAGAGGAG....................................................................................................................................................	23	9	0.11	1	0	0	0	1	0
.....................................................................................................................................................................................................................CTAATGAAGTTTTTGTTTGCGCCAG................	25	9	0.11	1	0	0	0	1	0
..................................................................................GTGGAATATCATTACCCAGAGGA.....................................................................................................................................................	23	9	0.11	1	0	1	0	0	0
.................................................................................................................................................................................................................TAGACTAATGAAGTTTTTGTTTGCGCCA.................	28	9	0.11	1	0	1	0	0	0
.................................................................................................................................................................................................................TAGACTAATGAAGTTTTTGTTTGCG....................	25	9	0.11	1	0	1	0	0	0
..................................................................................................................................................................................................................AGACTAATGAAGTTTTTGTTTGCGCCA.................	27	9	0.11	1	0	1	0	0	0
.................................................................................................................................................................................................................TAGACTAATGAAGTTTTTGTTTGCGCC..................	27	9	0.11	1	0	1	0	0	0
.................................................................................................................................................................................................................TAGACTAATGAAGTTTTTGTTTGCGCCC.................	28	9	0.11	1	0	1	0	0	0
.............................................................................................................................................................CTGATTGTACTAAGAAGGG..............................................................................	19	12	0.08	1	0	0	0	1	0
...........................................................................................................................................................TGCTGATTGTACTAAGAAGGGCTTTTGTT......................................................................	29	12	0.08	1	0	0	1	0	0
...............................................................................................................................................................GATTGTACTAAGAAGGGCTTTTG........................................................................	23	13	0.08	1	0	1	0	0	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTTT.........................................................................	23	13	0.08	1	0	0	0	1	0
................................................................................................................................................................ATTGTACTAAGAAGGGCTTTT.........................................................................	21	13	0.08	1	0	0	0	1	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTT..........................................................................	22	13	0.08	1	0	0	0	1	0
..............................................................................................................................................................TGATTGTACTAAGAAGGGCTTTTGC.......................................................................	25	13	0.08	1	0	0	0	1	0

droAna3

ATTAGGGCTTTCGCTTCCTTAAGAGTATCGTCACCAATGATTCCATCGAAGGAAT-------------TCCCAAGAAGGTGGTAATCAAGTTATTACCGATGGGCTCAAAGAATCGTCCTACTAGGCAACGCGTG-ATTTTAAC--CTTGCCAGCAGCAGATTGAACGTAAAAGGGAGTAGGTAAGAGGGTGGAACCGGCGGAGTGTTTTTGGCTAACAAAGTTCTTATTCGCGCCGGTATCGATAAGAAACTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........................................................................................................CAAAGAATCGTCCTACTAGGCAACGC..........................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................TAAC--CTTGCCAGCAGCAGATTGAACGTA....................................................................................	28	1	1.00	1	1	0	0	0	0	0
...................TAAGAGTATCGTCACCAATGATT....................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0
..................TTAAGAGTATCGTCACCAATGATTCC..................................................................................................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0
......................GAGTATCGTCACCAATGATTCCATCGAAG...........................................................................................................................................................................................................	29	2	0.50	1	1	0	0	0	0	0
................................................................................................................................................................ATTGAACGTAAAAGGGAGTAGGTAAG....................................................................	26	3	0.33	1	0	1	0	0	0	0
...............................................................................................................................................................GATTGAACGTAAAAGGGAGTAGGTAA.....................................................................	26	7	0.29	2	2	0	0	0	0	0
..............................................................................................TACCGATGGGCTCAAAGAATCGTCCTA.....................................................................................................................................	27	5	0.20	1	0	1	0	0	0	0
......................................................................................................................................................................................................................TAACAAAGTTCTTATTCGCGCCGGT...............	25	20	0.20	4	0	4	0	0	0	0
............................................................................................................................................................GCAGATTGAACGTAAAAGGGAGT...........................................................................	23	6	0.17	1	0	1	0	0	0	0
..................................................................................................................................................................................................................TGGCTAACAAAGTTCTTATTCGCGCC..................	26	20	0.15	3	1	2	0	0	0	0
......................................................................................................................................................................................................................TAACAAAGTTCTTATTCGCGCCGG................	24	20	0.15	3	3	0	0	0	0	0
...................................................................................................................................................................GAACGTAAAAGGGAGTAGGTAA.....................................................................	22	7	0.14	1	0	1	0	0	0	0
...................TAAGAGTATCGTCACCAATGAT.....................................................................................................................................................................................................................	22	8	0.13	1	1	0	0	0	0	0
...............................................................................................................................................................................................................TTTTGGCTAACAAAGTTCTTATTCGCGCC..................	29	20	0.05	1	0	1	0	0	0	0
.................................................................................................................................................................................................................TTGGCTAACAAAGTTCTTATTCGCGCC..................	27	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................................................TTTGGCTAACAAAGTTCTTATTCGCGC...................	27	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................GAGTGTTTTTGGCTAACAAAGTTCTTA..........................	27	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................GAGTGTTTTTGGCTAACAAAGTTCT............................	25	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................................................................GGCGGAGTGTTTTTGGCTAACAAAGC...............................	26	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................................................................................................TGGCTAACAAAGTTCTTATTCGCG....................	24	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................................................................TGGCTAACAAAGTTCTTATTCGCGCCGG................	28	20	0.05	1	1	0	0	0	0	0

droKik1

ATAATTGCCTTAACGGATTTTAAAGTGTCGTCCCCAGTAATGCCATGGAGGGCAATTAAACCGGGAAGAACGAAGAAGGTGAC------ATAATTGCCAATGGGGCTAAAAAATGGTCGGGTAAGCTGGTGCCTT-TTTTTTAT--CTCCCCTTCCGCGGATTGAACCGGGAAGGGTTTCGGCAAGGGATTGCATCCCTTGGCTA-TCTGGGGCTAATGAAGTTCTTATTCGCTCCAGTATTTATAAGTTAATT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ATCAGGGCTTTTAAAGTTCTTAGGGTGTCGTCTCCTATGATGCCGTCAAATGATGTTAGTCCAGGAAGGACAAAAAAGGTGAGAACGGTATCGTTCCCAATCGGCTTAAAAAATTGTCCAGTGATACAATGTGTT-ATTCTTAT--ATTACCCCCCGCGGACTGAACGACAAACGGTGTTGGTAATGCTATAGAGCCGGCGGAGTTCTTGGGGCTTATAAAATTGTTGTTAGCGCCGGTGTCTATAAGAAATTG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ATCAGGGCTTTTAGGGCTTTCAATGTGTCGTCCCCTATAATGCCGTCGAAAGATTTTAGACCCGGGAGTACAAAAAAGGTGAGAACAGTGTTGTTCCCCATTGGCTTAAA-AATTGTCCTGTGATACAGTGTGTGTATTTTTATGTTATATCCCCAGCGGATTGTACAGAAAAAGGCGTTAAAAGTGTTTTTGAACCGGCGGAGTTTTTGGGGCTAATAAAATTATTGTTAGCGCCGGTGTCTATCAGGAATTG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ATAAGGACCTTTAATGTTTTTAAAGTGTCGTCTCCTATAATGCCGTCAAATGATTTGAGTCCGGGAAGGGCAAAAAATGTGACAACTGTATCGTTCCCTATTGGTTTAAAAAATGGTCCCGTTATACTGTGTGTG-ATTTTAAT--GTCACCCCCAGCAGATTGGACAATGAACGGTGTAGATAATGTCGTGGAACCGGCGGAATTTTTGGGGCTTATAAAGTTGTTGTTAGCGCCGGTATCTATGAGGAATTG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

T------------------TTAAAGTTTCATCCCCAATAATGCCATGAAAGGCAGTTAAATCGGGAAG------AAAGGTAATCGGAGAGTCATTACGTATGGGCCTGCAAAGAGGTC-----AGTTGATGAGTT-ATTTGTAT--CTCCCCTCCAGCGGATTGGACTGGGAAGGATTTCGACAAGGGCTTGCATCCGTTGGTTATCTGGTGGTTAATGAAGTCCTTATTCGCGCCAGTGTCTATCAGAAACTG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATTATTGCATTTAAGGTTTTTAATGTGTCATCCCCGATAATACCATGGAAGGCGGTAAGGCCGGGGAGGACAAAAAATTCAATAGAGGAATTGTTGCCTACTGGCTTAAAGAAGGGTCCGGTTACTTGGTGGGTT-ATTTTTAT--ATCCCCTGCTGCGGATTGGACTTTAAAAGGTTTGGGCAAGGGAGTGCAACCCTTGGCTATTTGGGGGCTAATGAAATTTTTATTTGCGCCAGTATCTACGAGAAATGG	Size	Hit Count	Total Norm	Total
No Reads

droEug1

ATCAGGGCTTTTAAAGTTTTTAGGGTGTCGTCTCCTATGATGCCGTCAAATGATGTTAGTCCGGGAAGGACAAAAAAGGTGAGAACGGTATTGTTCCCAATCGGCTTAAAAAATTGTCCAGTGATACAATGCGTT-ATTTTAAC--ATTACCCCCTGCGGACTGAACGACAAACGGTGGGGGTAATGCTATAGAGCCGGCGGAGTTCTTTGGGCTTATAAAATTATTGTTAGCACCGGTGTCTATTAGAAATTG	Size	Hit Count	Total Norm	Total
No Reads

dm3

ATCAAGGCTTTTAATTCCTTAAGCGTATCGTCACCAATTATTCCGTCGAAGGAATTTAATCCAGGTAACACGAAAAATGTGAGAAGTAAGTCATTGCCAATTTTTTTAAAAAACTGCCCCACAAGTTGACGTGTG-ATTTTTAC--GCAACCTGTGGCAGACTGGACAAAGAATGGTGTTGTTAAAGGAGTTGAACCGGCAGCGATTTTTGGGCTAATAAAATTTTTATTTGCGCCGGTGTCAACTAGGAATTG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...............................................................................................................................................................GACTGGACAAAGAATGGTGT...........................................................................	20	1	707.00	707	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	101	173	105	153	174	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GACTGGACAAAGAATGGT.............................................................................	18	1	304.00	304	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	92	70	72	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................TGTTAAAGGAGTTGAACCGGCA.....................................................	22	1	144.00	144	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	21	5	20	80	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GACTGGACAAAGAATGGTGTTGT........................................................................	23	1	127.00	127	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	20	33	16	16	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAAAGGAGTTGAACCGGCA.....................................................	19	1	111.00	111	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	28	14	26	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TGGTGTTGTTAAAGGAGTTGAACCGGC......................................................	27	1	94.00	94	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	6	14	0	2	2	25	0	0	0	0	0	1	0	0	0	0	0	5	0	0	0	10	0	0	0	3	7	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	2	0	4	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
..............................................................................................................................................................AGACTGGACAAAGAATGGTGT...........................................................................	21	1	86.00	86	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	19	14	16	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............TTCCTTAAGCGTATCGTCACC...........................................................................................................................................................................................................................	21	4	1.75	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................ATTTTTATTTGCGCCGGTGTC............	21	5	1.60	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TATTTGCGCCGGTGTCAACTAGGAAT..	26	5	1.60	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................ATTTTTAC--GCAACCTGTGGCA...............................................................................................	21	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TTTTTATTTGCGCCGGTGTCAACTAGG.....	27	4	1.50	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................GAAGGAATTTAATCCAGGTAACACGAA....................................................................................................................................................................................	27	4	1.50	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TAAAATTTTTATTTGCGCCGGTGTCA...........	26	4	1.50	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

ACTATGGCTTTTAAGTCTTTGAGAGTATCGTCGCCAATGATACCATCAAAGGAATGTAAATTCGGTAGTACGAAAAAGGTAATATCCGAGTCGTTCCCTAGTGGTTTGAAGAATTTACCAACTAGGCGGTGCGTT-ATCATGAT--GTTACCCGCAGCGGACAGTACGGAGAAGGGTTTACGGACTGTGGTACACCCGGCTGCAAGTCTTCGGCTAATAAAGTTTTTGTTCGCCCCCGTGTCGATCAAAAACTT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGGC......................................................	28	1	250.00	250	0	0	0	1	0	0	0	0	1	2	0	0	204	42	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACTG...................................................................	25	3	51.33	154	0	0	0	0	0	0	0	0	0	0	9	0	141	4	0	0	0
..................................................................................................................TTACCAACTAGGCGGTGCGTT-ATCATGA...............................................................................................................	28	4	38.00	152	0	0	0	0	0	0	94	53	1	3	0	0	1	0	0	0	0
...........TAAGTCTTTGAGAGTATCGTCGCC...........................................................................................................................................................................................................................	24	1	38.00	38	0	2	7	0	3	0	3	6	3	3	0	0	10	1	0	0	0
...................................................................................................................TACCAACTAGGCGGTGCGTT-ATCATGA...............................................................................................................	27	4	36.25	145	0	0	0	0	0	0	79	47	7	7	1	0	4	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGCGGAC............................................................................................	28	1	33.00	33	0	0	0	0	0	0	8	13	9	1	0	0	2	0	0	0	0
..........................................................................................................................................................................GAAGGGTTTACGGACTGTGGTACACC..........................................................	26	1	33.00	33	0	0	0	0	0	0	7	17	7	1	1	0	0	0	0	0	0
...........................................................................................................................................................................AAGGGTTTACGGACTGTGGTACACCCGGC......................................................	29	1	27.00	27	0	0	0	0	0	0	0	0	0	0	0	0	25	2	0	0	0
...........TAAGTCTTTGAGAGTATCGTCGCCAA.........................................................................................................................................................................................................................	26	1	24.00	24	0	0	2	0	0	0	0	4	5	5	1	0	6	1	0	0	0
....................................................................................................................ACCAACTAGGCGGTGCGTT-ATCATGA...............................................................................................................	26	4	22.25	89	0	0	0	0	0	0	45	35	3	4	1	0	1	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCGAGT...................................................................................................................................................................	27	1	21.00	21	0	0	0	0	0	0	3	13	1	2	2	0	0	0	0	0	0
..TATGGCTTTTAAGTCTTTGAGAGTA...................................................................................................................................................................................................................................	25	3	19.67	59	0	0	0	0	0	0	7	3	15	25	9	0	0	0	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACTGT..................................................................	26	3	18.00	54	0	0	0	0	0	0	0	0	0	0	3	0	51	0	0	0	0
.............................GTCGCCAATGATACCATCAAAGGAA........................................................................................................................................................................................................	25	1	15.00	15	0	0	0	0	0	0	1	5	3	5	1	0	0	0	0	0	0
...........TAAGTCTTTGAGAGTATCGTCGCCAATGA......................................................................................................................................................................................................................	29	1	14.00	14	0	0	0	0	0	0	6	7	1	0	0	0	0	0	0	0	0
........................................................................................................TTTGAAGAATTTACCAACTAGGCGGTG...........................................................................................................................	27	4	13.25	53	0	0	0	0	0	0	20	21	2	1	1	0	7	1	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGCTGC...................................................	25	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	8	4	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGCTG....................................................	24	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	9	3	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGCGGA.............................................................................................	27	1	12.00	12	0	0	0	2	0	0	3	5	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TAAAGTTTTTGTTCGCCCCCGTGTCGA..........	27	4	11.75	47	0	0	0	2	0	0	16	14	7	8	0	0	0	0	0	0	0
...........................TCGTCGCCAATGATACCATCAAAGGAA........................................................................................................................................................................................................	27	1	11.00	11	0	0	0	0	0	0	1	1	2	1	6	0	0	0	0	0	0
..................................................................................TATCCGAGTCGTTCCCTAGTGGTT....................................................................................................................................................	24	1	11.00	11	0	0	0	0	0	0	4	2	4	0	1	0	0	0	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGAC.....................................................................	23	3	10.33	31	0	0	14	0	0	0	0	0	1	0	11	0	5	0	0	0	0
..............................................................................................TCCCTAGTGGTTTGAAGAATTTACC.......................................................................................................................................	25	3	9.33	28	0	0	0	3	5	0	5	2	4	0	9	0	0	0	0	0	0
..........................................................................................................................................................................GAAGGGTTTACGGACTGTGGTACACCCGGC......................................................	30	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGCG...............................................................................................	25	1	9.00	9	0	0	0	1	3	1	0	1	2	0	1	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGG...............................................................................................................................................................................	15	4	9.00	36	0	0	0	0	0	0	0	0	1	0	35	0	0	0	0	0	0
..................................................................................................TAGTGGTTTGAAGAATTTACCAAC....................................................................................................................................	24	4	8.75	35	0	0	0	0	0	0	0	0	2	0	33	0	0	0	0	0	0
.................................................................................................................................................................CAGTACGGAGAAGGGTTTACGGACTG...................................................................	26	3	8.33	25	0	0	0	0	0	0	0	0	0	0	12	0	13	0	0	0	0
.....................................................................................................TGGTTTGAAGAATTTACCAACTAGGCGG.............................................................................................................................	28	4	8.25	33	0	0	0	0	0	0	14	9	1	5	0	0	4	0	0	0	0
.................................................................................................................TTTACCAACTAGGCGGTGCGTT-ATCATGA...............................................................................................................	29	4	8.00	32	0	0	0	0	0	0	20	12	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGG.......................................................	27	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0
.........................TATCGTCGCCAATGATACCATCAAAGGAA........................................................................................................................................................................................................	29	1	8.00	8	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TGTGGTACACCCGGCTGCAAGTCTT............................................	25	1	8.00	8	0	0	0	0	0	0	1	0	1	2	0	0	4	0	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGCTGCA..................................................	26	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	7	1	0	0	0
.........................................................................................................TTGAAGAATTTACCAACTAGGCGGTG...........................................................................................................................	26	4	7.75	31	0	0	0	0	0	0	16	7	4	2	2	0	0	0	0	0	0
.................................................................................................................................................................CAGTACGGAGAAGGGTTTACGGAC.....................................................................	24	3	7.67	23	0	1	10	0	0	0	0	0	1	1	8	0	2	0	0	0	0
..........................................................................................................................TAGGCGGTGCGTT-ATCATGAT--GTTA........................................................................................................	25	4	7.50	30	0	0	0	0	0	0	0	0	0	0	2	0	23	5	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACT....................................................................	24	3	7.33	22	0	0	3	0	0	0	0	1	0	0	16	0	0	2	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGGCGGTGCG.........................................................................................................................	27	4	7.25	29	0	0	0	0	0	0	12	11	1	5	0	0	0	0	0	0	0
..........................................................................................................................................................................GAAGGGTTTACGGACTGTGGTACACCC.........................................................	27	1	7.00	7	0	0	0	0	0	0	0	2	1	0	4	0	0	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGGCA.....................................................	29	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCGAG....................................................................................................................................................................	26	1	7.00	7	0	0	0	0	1	0	0	0	1	0	5	0	0	0	0	0	0
...........TAAGTCTTTGAGAGTATCGTCGCCA..........................................................................................................................................................................................................................	25	1	7.00	7	0	0	2	0	0	0	0	0	0	1	0	0	3	1	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGGCGGTGCGT........................................................................................................................	28	4	6.25	25	0	0	0	1	0	0	16	5	0	3	0	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATA..........................................................................................................................................................................	20	1	6.00	6	0	0	0	0	3	1	0	0	0	0	2	0	0	0	0	0	0
...............TCTTTGAGAGTATCGTCGCCAATGA......................................................................................................................................................................................................................	25	1	6.00	6	0	1	0	0	1	2	0	0	1	1	0	0	0	0	0	0	0
....................................................................................................................................................................TACGGAGAAGGGTTTACGGACTGTGG................................................................	26	4	5.75	23	0	0	0	3	0	0	1	2	1	4	6	0	6	0	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGGCGGTG...........................................................................................................................	25	4	5.75	23	0	0	0	0	0	0	13	1	2	3	1	0	3	0	0	0	0
....................................................................................................................................................................TACGGAGAAGGGTTTACGGACTGTGGT...............................................................	27	4	5.50	22	0	0	0	4	0	0	4	7	3	2	2	0	0	0	0	0	0
....................................................................................................................................................................TACGGAGAAGGGTTTACGGACTG...................................................................	23	4	5.25	21	0	0	4	0	0	0	0	0	0	0	0	0	14	3	0	0	0
...........................................................................................................................................................................AAGGGTTTACGGACTGTGGTACACC..........................................................	25	1	5.00	5	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTTACGGACTGTGGTACACCCGGC......................................................	24	1	5.00	5	0	0	0	0	0	0	0	2	0	0	0	0	3	0	0	0	0
.................................................................................................................................................................................TTACGGACTGTGGTACACCCGGCTGC...................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCA..................................................................................................	22	1	5.00	5	0	0	0	0	3	1	0	0	0	0	1	0	0	0	0	0	0
.................................................................TAGTACGAAAAAGGTAATATCCGAGT...................................................................................................................................................................	26	1	5.00	5	0	0	0	0	0	0	1	3	0	1	0	0	0	0	0	0	0
..............GTCTTTGAGAGTATCGTCGCCAATGA......................................................................................................................................................................................................................	26	1	5.00	5	0	0	0	0	1	0	2	0	1	0	0	0	1	0	0	0	0
..........................................................................................................................TAGGCGGTGCGTT-ATCATGAT--GTTACC......................................................................................................	27	4	4.50	18	0	0	0	0	0	0	1	1	0	0	3	0	13	0	0	0	0
................................................................GTAGTACGAAAAAGGT..............................................................................................................................................................................	16	4	4.50	18	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0	0
..........................................................................................................................TAGGCGGTGCGTT-ATCATGAT--GTTAC.......................................................................................................	26	4	4.50	18	0	0	0	0	0	0	0	0	0	0	2	0	16	0	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGGCGGTGC..........................................................................................................................	26	4	4.25	17	0	0	0	0	0	0	12	5	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................TACGGAGAAGGGTTTACGGACTGTG.................................................................	25	4	4.25	17	0	0	0	0	4	0	0	0	0	1	5	0	7	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGCGG..............................................................................................	26	1	4.00	4	0	0	0	1	0	0	0	2	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TGTGGTACACCCGGCTGCAAGTCTTA...........................................	26	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
.............................................................................................................................................................................GGGTTTACGGACTGTGGTACACCCGGC......................................................	27	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0
...........TAAGTCTTTGAGAGTATCGTCGC............................................................................................................................................................................................................................	23	1	4.00	4	0	0	1	0	0	0	2	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................TCTTCGGCTAATAAAGTTTTTGTT........................	24	1	4.00	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................GAAGGGTTTACGGACTGTGGTACACCCGG.......................................................	29	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0
.........................................................................................................TTGAAGAATTTACCAACTAGGCGGTGCGT........................................................................................................................	29	4	4.00	16	0	0	0	0	0	0	4	10	1	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................TGTGGTACACCCGGCTGCAAGTCTTC...........................................	26	1	4.00	4	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0
..............................................................................................................................................................................................................TCTTCGGCTAATAAAGTTTTTGTTCGC.....................	27	1	4.00	4	0	0	0	0	0	0	1	0	0	2	1	0	0	0	0	0	0
...........................................................................................................................................................................AAGGGTTTACGGACTGTGGTACACCCGG.......................................................	28	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACTGTG.................................................................	27	3	4.00	12	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0
........................................................................................................TTTGAAGAATTTACCAACTAGGCGGT............................................................................................................................	26	4	4.00	16	0	0	1	0	0	0	4	9	0	0	0	0	0	2	0	0	0
......................................................................................................................................T-ATCATGAT--GTTACCCGCAGCGGA.............................................................................................	24	1	4.00	4	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	0	0
...........TAAGTCTTTGAGAGTATCGTCGCCAATG.......................................................................................................................................................................................................................	28	1	4.00	4	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCC.........................................................	25	1	4.00	4	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGCGGACA...........................................................................................	29	1	4.00	4	0	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................TACGGAGAAGGGTTTACGGACTGT..................................................................	24	4	3.75	15	0	0	1	0	0	0	0	0	3	1	3	0	7	0	0	0	0
..............................................................................................TCCCTAGTGGTTTGAAGAATTTACCAAC....................................................................................................................................	28	3	3.67	11	0	0	0	3	0	0	1	2	0	0	5	0	0	0	0	0	0
.............................................................................................TTCCCTAGTGGTTTGAAGAATTTACC.......................................................................................................................................	26	3	3.00	9	0	0	0	3	0	0	1	2	1	0	1	0	1	0	0	0	0
..........................................................................................................................................................................GAAGGGTTTACGGACTGTGGTACAC...........................................................	25	1	3.00	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TTACGGACTGTGGTACACCCGGCTG....................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCG....................................................................................................	20	1	3.00	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGC................................................................................................	24	1	3.00	3	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0
....................................ATGATACCATCAAAGGAATGTAAATTCGTA............................................................................................................................................................................................	30	1	3.00	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGC...................................................................................................	21	1	3.00	3	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................TTGAAGAATTTACCAACTAGGCGGT............................................................................................................................	25	4	3.00	12	0	0	0	0	0	0	6	5	0	1	0	0	0	0	0	0	0
.................................................................................................................................................................................TTACGGACTGTGGTACACCCGGC......................................................	23	1	3.00	3	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGGCT.....................................................	29	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
......................................................TGTAAATTCGGTAGTACGAAAAAGGTA.............................................................................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCGA.....................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0
.........................................................................................................TTGAAGAATTTACCAACTAGGCGGTGCG.........................................................................................................................	28	4	2.75	11	0	0	0	0	0	0	7	4	0	0	0	0	0	0	0	0	0
.....................................................................................................TGGTTTGAAGAATTTACCAACTAGGC...............................................................................................................................	26	4	2.75	11	0	0	0	0	0	0	1	3	6	1	0	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTA.............................................................................................................................................................................	17	4	2.75	11	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0
................................................................................................................................................................ACAGTACGGAGAAGGGTTTACGGAC.....................................................................	25	3	2.33	7	0	0	6	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGGCGGTGCGTT-......................................................................................................................	29	4	2.25	9	0	0	0	0	0	0	4	5	0	0	0	0	0	0	0	0	0
............................................................TTCGGTAGTACGAAAAAGGTAATAT.........................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..............................................................................................................................................................................GGTTTACGGACTGTGGTACACCCGGC......................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0
........................................................................................................................................................CGCAGCGGACAGTACGGAGAAGGGTT............................................................................	26	1	2.00	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0
...............................................................................TAATATCCGAGTCGTTCCCTAGTGGTT....................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGC......................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0
........TTTTAAGTCTTTGAGAGTATCGTCGC............................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0
.....................AGAGTATCGTCGCCAATGATA....................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGA......................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
....................................................................................................................................................................................CGGACTGTGGTACACCCGGCTAT...................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
....................................................................................................................................................................TACGGAGAAGGGTTTACGGACT....................................................................	22	4	2.00	8	0	0	1	0	0	0	0	0	0	0	1	0	6	0	0	0	0
....................................................................................TCCGAGTCGTTCCCTAGTGGTTTGAAGA..............................................................................................................................................	28	3	2.00	6	0	0	0	0	0	0	0	5	1	0	0	0	0	0	0	0	0
.............................................TCAAAGGAATGTAAATTCGGTAGTACGAAA...................................................................................................................................................................................	30	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................GAGAAGGGTTTACGGACTGTGGTACACC..........................................................	28	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGCTGCAA.................................................	27	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................ACGGACTGTGGTACACCCGGCTGCA..................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................................................................TTTTGTTCGCCCCCGTGTCGATCA.......	24	4	2.00	8	0	0	0	2	4	0	0	0	0	0	1	0	1	0	0	0	0
...........................................................................................CGTTCCCTAGTGGTTTGAAGAATT...........................................................................................................................................	24	3	2.00	6	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0
........TTTTAAGTCTTTGAGAGTATCGTCGCC...........................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
........................................................................................................................................................CGCAGCGGACAGTACGGAGAAGGG..............................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
.........................................................................................................................................................................AGAAGGGTTTACGGACTGTGGTACACC..........................................................	27	1	2.00	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCC.....................................................................................................	19	1	2.00	2	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CCGCAGCGGACAGTACGGAGAAGGGT.............................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0
.................................................................................................................................................................................TTACGGACTGTGGTACACCCGGCTGCA..................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
........................................TACCATCAAAGGAATGTAAATTCGGTA...........................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.................................................................................ATATCCGAGTCGTTCCCTAGTGGTT....................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................AAGGGTTTACGGACTGTGGTACAC...........................................................	24	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................TT-ATCATGAT--GTTACCCGCAGCGGA.............................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCC.......................................................................................................................................................................	23	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
...........TAAGTCTTTGAGAGTATCG................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
...................................AATGATACCATCAAAGGAATGTAAAT.................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACAA...................................................................	25	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0
....TGGCTTTTAAGTCTTTGAGAGTATC.................................................................................................................................................................................................................................	25	3	2.00	6	0	0	0	0	0	0	1	0	0	1	4	0	0	0	0	0	0
...................................AATGATACCATCAAAGGAATGTAAATT................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
.........................................................................................................................................................................AGAAGGGTTTACGGACTGTGGTACAC...........................................................	26	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGCGGACAG..........................................................................................	30	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
....................................................................................TCCGAGTCGTTCCCTAGTGGTTTGAA................................................................................................................................................	26	3	2.00	6	0	0	0	0	0	5	0	0	1	0	0	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATC........................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................................................................................GTACGGAGAAGGGTTTACGGACTG...................................................................	24	4	1.75	7	0	0	0	0	0	0	0	0	0	0	1	0	6	0	0	0	0
.....................................................................................................................................................................ACGGAGAAGGGTTTACGGACTGTGGT...............................................................	26	4	1.75	7	0	0	0	0	0	0	0	1	0	0	6	0	0	0	0	0	0
.........................................................................................................TTGAAGAATTTACCAACTAGGCGGTGC..........................................................................................................................	27	4	1.75	7	0	0	0	0	0	0	5	1	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................CGGAGAAGGGTTTACGGACTGTGGT...............................................................	25	4	1.75	7	0	0	0	0	0	0	0	0	4	0	3	0	0	0	0	0	0
.................................................................................................................................................................CAGTACGGAGAAGGGTTTACGGA......................................................................	23	3	1.67	5	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	0
..TATGGCTTTTAAGTCTTTGAGAGTAT..................................................................................................................................................................................................................................	26	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0
......................................................................................CGAGTCGTTCCCTAGTGGTTTGAAGA..............................................................................................................................................	26	3	1.67	5	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGG................................................................................................................................	20	4	1.50	6	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TTCGGCTAATAAAGTTTTTGTTCGC.....................	25	2	1.50	3	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0
..........................................................................................................................TAGGCGGTGCGTT-ATCATGAT--GTT.........................................................................................................	24	4	1.50	6	0	0	0	0	0	0	0	0	0	0	1	0	4	1	0	0	0
........................................................................................................TTTGAAGAATTTACCAACTAGGCGG.............................................................................................................................	25	4	1.50	6	0	0	0	0	0	0	4	1	0	1	0	0	0	0	0	0	0
..................................................................................................TAGTGGTTTGAAGAATTTAC........................................................................................................................................	20	4	1.50	6	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................TTTGAAGAATTTACCAACTAGGCGGTGCGT........................................................................................................................	30	4	1.50	6	0	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TTTTGTTCGCCCCCGTGTCGATC........	23	4	1.50	6	0	0	0	3	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAG.................................................................................................................................	19	4	1.50	6	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0
......................................................................................CGAGTCGTTCCCTAGTGGTTTGAAGAA.............................................................................................................................................	27	3	1.33	4	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0
............................................................................................GTTCCCTAGTGGTTTGAAGA..............................................................................................................................................	20	3	1.33	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..TATGGCTTTTAAGTCTTTGAGAGTATC.................................................................................................................................................................................................................................	27	3	1.33	4	0	0	0	0	0	0	0	0	1	1	0	0	2	0	0	0	0
..TATGGCTTTTAAGTCTTTGAGAGT....................................................................................................................................................................................................................................	24	3	1.33	4	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACTGTA.................................................................	27	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
.........................................................................................GTCGTTCCCTAGTGGTTTGAAGAATT...........................................................................................................................................	26	3	1.33	4	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0
...........TAAGTCTTTGAGAGTA...................................................................................................................................................................................................................................	16	3	1.33	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.................................................................................................................................................................CAGTACGGAGAAGGGTTTACGGACT....................................................................	25	3	1.33	4	0	0	1	0	0	0	0	1	2	0	0	0	0	0	0	0	0
.........................................................................................................TTGAAGAATTTACCAACTAGGCGGTGCGTT-......................................................................................................................	30	4	1.25	5	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACC......................................................................................................	18	4	1.25	5	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................TAGTGGTTTGAAGAATTTACC.......................................................................................................................................	21	4	1.25	5	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0
..........................................................................................................................TAGGCGGTGCGTT-ATCATGAT--GTTAA.......................................................................................................	26	4	1.25	5	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0
........................................................................................................TTTGAAGAATTTACCAACTAGGCGGTGC..........................................................................................................................	28	4	1.25	5	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGGCGGT............................................................................................................................	24	4	1.25	5	0	0	0	0	0	0	2	1	0	1	0	0	1	0	0	0	0
...........................TCGTCGCCAATGATACCATCAAAGGA.........................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................AATGATACCATCAAAGGAATGT.....................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCGAGC...................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.........................................................................AAAAGGTAATATCCGAGTCGTTCCC............................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................ACGGACTGTGGTACACCCGGCT.....................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCGAGA...................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................CTTTGAGAGTATCGTCGCCAATG.......................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................T--GTTACCCGCAGCGGACAGTACGGA....................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.........TTTAAGTCTTTGAGAGTATCGTCG.............................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................ACGGACTGTGGTACACCCGGCTGAT..................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................TGTGGTACACCCGGCTGCAAGTCT.............................................	24	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACTA...................................................................	25	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
........................................................................................................................................................................................................TGCAAGTCTTCGGCTAATAAAGTTTT............................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...............TCTTTGAGAGTATCGTCGCCAATGATA....................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................T-ATCATGAT--GTTACCCGCAGCGGC.............................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................CGTCGCCAATGATACCATCAAAGGAA........................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCG......................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................GTACGAAAAAGGTAATATCCGAGT...................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................TACCATCAAAGGAATGTAAATTCGGT............................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..................................................................................TATCCGAGTCGTTCCCTAGTGGTTTGA.................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................TTCCCTAGTGGTTTGAAGAATTTACCAAC....................................................................................................................................	29	3	1.00	3	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGGCC.....................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................TGCAAGTCTTCGGCTA......................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................TAAATTCGGTAGTACGAAAAAGGTAA............................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TACACCCGGCTGCAAGTCTTCGGC........................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................T-ATCATGAT--GTTACCCGCAG.................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TGAAGAATTTACCAACTAGGC...............................................................................................................................	21	4	1.00	4	0	0	0	0	0	0	1	1	0	1	1	0	0	0	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGG.......................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................AAGGAATGTAAATTCGGTAGTACGAAA...................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................TAGTGGTTTGAAGAATTTACCAACTAGG................................................................................................................................	28	4	1.00	4	0	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0
...................................................................................................................................................................................ACGGACTGTGGTACACCCGGCTG....................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................GTTTACGGACTGTGGTACACCCGGC......................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................ACGGACTGTGGTACACCCGGCTGA...................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCGAGTCG.................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGGCGGTGCGTT-ATCATGAT--GT..........................................................................................................	23	4	1.00	4	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0
.........................TATCGTCGCCAATGATACCATCAAAGGAT........................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....TGGCTTTTAAGTCTTTGAGAGTATCGTC..............................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
....................................................................TACGAAAAAGGTAATATCCGAGTCGT................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGGCG.....................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................TGCAAGTCTTCGGCTAATAAAGTTT.............................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..................................................................................TATCCGAGTCGTTCCCTAGTGGTTT...................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................TGAT--GTTACCCGCAGCGGACAGTACG......................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGGCTGC...................................................	31	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
......................................................................CGAAAAAGGTAATATCCGAG....................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................ACTGTGGTACACCCGGCTGCAAGTC..............................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................GGTAATATCCGAGTCGTTCCCTAGTGGT.....................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...............................................AAAGGAATGTAAATTCGGTAGTACGAA....................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................CCCGCAGCGGACAGTACGGAGAAGGGTT............................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................AT--GTTACCCGCAGCGG..............................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................ACGGACTGTGGTACACCCGGCTGCAA.................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................TTTACGGACTGTGGTACACCCGGCT.....................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...............................................................GGTAGTACGAAAAAGGTAATATCCGAGT...................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................TACCATCAAAGGAATGTAAATTC...............................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................AT--GTTACCCGCAGCGGAC............................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................CACCCGGCTGCAAGTCTTCG..........................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
................................................AAGGAATGTAAATTCGGTAGTACGAAAA..................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................CGCAGCGGACAGTACGGAGAAGG...............................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................AAGGAATGTAAATTCGGTAGTACG......................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...............................................................................TAATATCCGAGTCGTTCCCTAGTGGT.....................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................TGATACCATCAAAGGAATGTAAATTCG..............................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................AAGGAATGTAAATTCGGTAGTACA......................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................................AATATCCGAGTCGTTCCCTAGTGGTT....................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........TTTAAGTCTTTGAGAGTATCGTCGCCAA.........................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGACTGAA.................................................................	27	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
...........................TCGTCGCCAATGATACCATCAAAG...........................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................T-ATCATGAT--GTTACCCGCAGCGGAC............................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................TGAT--GTTACCCGCAGCGGACA...........................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...............TCTTTGAGAGTATCGTCGCCAA.........................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
......................................................TGTAAATTCGGTAGTACGA.....................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGCT.....................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................TGAGAGTATCGTCGCCAATGATACCATC...............................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................AAAGGAATGTAAATTCGGTAGTACGAAAA..................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............................................................TTCGGTAGTACGAAAAAGGTAA............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................TACGGACTGTGGTACACCCGGCTGT...................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................TTTACGGACTGTGGTACACCCGGCTG....................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.................TTTGAGAGTATCGTCGCCAA.........................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
................CTTTGAGAGTATCGTCGCC...........................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................TGAGAGTATCGTCGCCAATGATACCA.................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.....................................TGATACCATCAAAGGAATGTAAATT................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................AGTACGGAGAAGGGTTTACGGA......................................................................	22	3	1.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
....................................................................................................................................GTT-ATCATGAT--GTTACCCGCAGCGGA.............................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...........TAAGTCTTTGAGAGTATCGTC..............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................AACTAGGCGGTGCGTT-ATCATGA...............................................................................................................	23	4	1.00	4	0	0	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0
.....................................................................ACGAAAAAGGTAATATCCGAGTCGT................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........TTTAAGTCTTTGAGAGTATCGTCGCCAATGA......................................................................................................................................................................................................................	31	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................AAGGAATGTAAATTCGGTAGTACGAA....................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................GTACGAAAAAGGTAATAT.........................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................AATATCCGAGTCGTTCCCTAGTGGTTT...................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................TGTAAATTCGGTAGTACG......................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....TGGCTTTTAAGTCTTTGAGAGTATCGT...............................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........TTTTAAGTCTTTGAGAGTATCGTCGCCAA.........................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................ATGAT--GTTACCCGCAGCGGA.............................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........TTAAGTCTTTGAGAGTATCGTCGCCAA.........................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........TTAAGTCTTTGAGAGTATCGTCGCCA..........................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................................................TATCCGAGTCGTTCCCTAGTGGT.....................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
................................................................GTAGTACGAAAAAGGTAATATCCGAGTC..................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................AAAAGGTAATATCCGAGTCGTTCC.............................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..TATGGCTTTTAAGTCTTTGAGAGTATCGT...............................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.................................................AGGAATGTAAATTCGGTAGTACG......................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TTACGGACTGTGGTACACCCGGCTGCAA.................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................................CAGTACGGAGAAGGGTTTACGGACAA...................................................................	26	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.........................................................................................................................................TCATGAT--GTTACCCGCAGCGGAC............................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
........................................TACCATCAAAGGAATGTAAATT................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................CGCCAATGATACCATCAAAGGAATGT.....................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................GGGTTTACGGACTGTGGTACACCCGG.......................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................GTACGGAGAAGGGTTTACGGACTGT..................................................................	25	4	1.00	4	0	0	0	0	0	0	0	1	0	0	2	0	1	0	0	0	0
...........................................CATCAAAGGAATGTAAATTCGGTAG..........................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.....................................TGATACCATCAAAGGAATGTAAATTC...............................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TACACCCGGCTGCAAGTCTTC...........................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CGTT-ATCATGAT--GTTACCCGCAGCGGAT............................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................T-ATCATGAT--GTTACCCGCAGCGGACA...........................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................TGTAAATTCGGTAGTACGAAAAAGG...............................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.................................................................TAGTACGAAAAAGGTAATATCCGAG....................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................AGTGGTTTGAAGAATTTACCAAC....................................................................................................................................	23	4	1.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
................................GCCAATGATACCATCAAAGGAATGT.....................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................AGGGTTTACGGACTGTGGTACACCCGGCAA....................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0

droSec2

ACTACTGCTTTCAA-GTCTTGAGCGTGTCGTCCCCTATGATGCCATCGAAGGTATCTAAACCGGGGAGGACAAAAAAGGTGAGGGTCGAGTCATTCCCTAGTTTTTCGAAAAATTTTCCGGCTACGCGGCGTGTT-ATTCTAAC--AGAACCTGTGGCCGATTGAACGCAAAAGGGAGTAGGGAGGATAGTCGATCCGGCGGCGATTTTGGGGCTGATGAAGTTTTTGTTAGCGCCGGTATCGATCAAGAATTG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGAG.....................................................................	23	20	10.40	208	152	0	53	3
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGG................	24	20	8.45	169	99	1	67	2
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGA......................................................................	22	20	6.70	134	125	0	0	9
.....................................................................................................TTTTTCGAAAAATTTTCCGGCTACGCGG.............................................................................................................................	28	18	4.50	81	40	0	39	2
.....................................................................................................TTTTTCGAAAAATTTTCCGGCTACG................................................................................................................................	25	20	4.25	85	45	0	39	1
.....................................................ATCTAAACCGGGGAGGACAAAAAAGG...............................................................................................................................................................................	26	15	4.13	62	33	2	21	6
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGAGG....................................................................	24	20	3.95	79	62	1	6	10
.....................................................................................................TTTTTCGAAAAATTTTCCGGCTACGC...............................................................................................................................	26	19	3.74	71	30	0	41	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGGT...............	25	19	3.00	57	36	3	15	3
.....................................................................................................TTTTTCGAAAAATTTTCCGGCTAC.................................................................................................................................	24	20	1.90	38	25	0	13	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGG.......................................................................	21	20	1.60	32	31	0	0	1
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGG........................................................................	20	20	1.45	29	18	0	11	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCG.................	23	20	1.35	27	24	0	0	3
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGAGGA...................................................................	25	20	1.20	24	15	1	7	1
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGGTA..............	26	19	1.00	19	15	0	2	2
.................................................................................................................................CGTGTT-ATTCTAAC--AGAACCTGTGGC................................................................................................	26	8	0.88	7	6	0	1	0
...................TGAGCGTGTCGTCCCCTATGATGCCA.................................................................................................................................................................................................................	26	20	0.70	14	0	0	14	0
......................................................TCTAAACCGGGGAGGACAAAAAAGG...............................................................................................................................................................................	25	15	0.67	10	7	1	2	0
.....................................................................................................TTTTTCGAAAAATTTTCCGGCTA..................................................................................................................................	23	20	0.65	13	8	0	3	2
...................TGAGCGTGTCGTCCCCTATGATGCCATC...............................................................................................................................................................................................................	28	20	0.55	11	11	0	0	0
...................................................................................................................................................................GAACGCAAAAGGGAGTAGGGAG.....................................................................	22	20	0.55	11	10	0	1	0
.....................................................ATCTAAACCGGGGAGGACAAAAAA.................................................................................................................................................................................	24	18	0.50	9	7	0	1	1
.....................................................ATCTAAACCGGGGAGGACAAAA...................................................................................................................................................................................	22	20	0.50	10	5	0	5	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCC..................	22	20	0.50	10	7	0	2	1
.....................................................ATCTAAACCGGGGAGGACAAAAA..................................................................................................................................................................................	23	20	0.45	9	6	0	3	0
...................TGAGCGTGTCGTCCCCTATGATGC...................................................................................................................................................................................................................	24	20	0.45	9	0	0	8	1
.........................TGTCGTCCCCTATGATGCCATCGA.............................................................................................................................................................................................................	24	20	0.40	8	8	0	0	0
.....................................................ATCTAAACCGGGGAGGACAA.....................................................................................................................................................................................	20	20	0.40	8	5	0	3	0
...................................................................................................................................TGTT-ATTCTAAC--AGAACCTGTGGCCGA.............................................................................................	27	8	0.38	3	2	0	1	0
.....................................................ATCTAAACCGGGGAGGACAAA....................................................................................................................................................................................	21	20	0.35	7	0	0	7	0
.......................................................................................................................................................................................................................GATGAAGTTTTTGTTAGCGCCGG................	23	20	0.35	7	7	0	0	0
.....................................................................................................TTTTTCGAAAAATTTTCCGGCTACGCG..............................................................................................................................	27	18	0.33	6	6	0	0	0
...........................................................................................................................................................................................TAGTCGATCCGGCGGCGATTTTGG...........................................	24	6	0.33	2	1	0	1	0
...........................................................................................................................................................................................TAGTCGATCCGGCGGCGATTTTGGGG.........................................	26	6	0.33	2	0	0	1	1
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGAGGATA.................................................................	27	6	0.33	2	2	0	0	0
...........................................................................................................................................................................................TAGTCGATCCGGCGGCGATTTTGGG..........................................	25	6	0.33	2	0	1	1	0
...................TGAGCGTGTCGTCCCCTATGATGCC..................................................................................................................................................................................................................	25	20	0.30	6	5	0	0	1
...................................................................................................................................TGTT-ATTCTAAC--AGAACCTGTGGCCGAT............................................................................................	28	8	0.25	2	2	0	0	0
.........................TGTCGTCCCCTATGATGCCATCGAAGG..........................................................................................................................................................................................................	27	20	0.25	5	5	0	0	0
...................................................................................................................................TGTT-ATTCTAAC--AGAACCTGTGGC................................................................................................	24	8	0.25	2	2	0	0	0
.....................................................................................................................................TT-ATTCTAAC--AGAACCTGTGG.................................................................................................	21	8	0.25	2	2	0	0	0
......................................................................................................................................T-ATTCTAAC--AGAACCTGTGGCCGATTG..........................................................................................	27	8	0.25	2	2	0	0	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGAGT....................................................................	24	20	0.25	5	4	0	0	1
.....................................................................................................TTTTTCGAAAAATTTTCCGGCT...................................................................................................................................	22	20	0.25	5	3	0	2	0
.......................................................................................................................................................................................................................GATGAAGTTTTTGTTAGCGCCGGT...............	24	19	0.21	4	4	0	0	0
.....................................................................................................TTTTTCGAAAAATTTTCCGG.....................................................................................................................................	20	20	0.20	4	0	0	4	0
...................................................................................................................................................................GAACGCAAAAGGGAGTAGGGAGG....................................................................	23	20	0.20	4	4	0	0	0
...................TGAGCGTGTCGTCCCCTATGATGCCAT................................................................................................................................................................................................................	27	20	0.20	4	0	0	4	0
.....................................................ATCTAAACCGGGGAGGACAAAAAAG................................................................................................................................................................................	25	15	0.20	3	2	0	1	0
.....................................................................................................................................................................................................................CTGATGAAGTTTTTGTTAGCGCCGG................	25	20	0.20	4	3	0	1	0
.........................TGTCGTCCCCTATGATGCCATCGAA............................................................................................................................................................................................................	25	20	0.20	4	3	0	1	0
.....................................................................................................TTTTTCGAAAAATTTTCCGGCTACGCGGC............................................................................................................................	29	18	0.17	3	2	0	1	0
......................................................................................................TTTTCGAAAAATTTTCCGGCTACGCGG.............................................................................................................................	27	18	0.17	3	2	0	1	0
...........................................................................................................................................................................................TAGTCGATCCGGCGGCGATTTTGGGGC........................................	27	6	0.17	1	1	0	0	0
...........................................................................................................................................................................................TAGTCGATCCGGCGGCGATT...............................................	20	6	0.17	1	1	0	0	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGGG.........................................	19	19	0.16	3	3	0	0	0
......................................................................................................TTTTCGAAAAATTTTCCGGCTACGC...............................................................................................................................	25	19	0.16	3	2	0	1	0
......................................................................................................TTTTCGAAAAATTTTCCGGCTAC.................................................................................................................................	23	20	0.15	3	2	0	1	0
......................GCGTGTCGTCCCCTATGATGCCATC...............................................................................................................................................................................................................	25	20	0.15	3	1	0	2	0
...................................................................................................................................................................GAACGCAAAAGGGAGTAGGG.......................................................................	20	20	0.15	3	3	0	0	0
........................................................................................................................................................TGTGGCCGATTGAACGCAAAAGGGAGT...........................................................................	27	20	0.15	3	3	0	0	0
........................................................TAAACCGGGGAGGACAAAAAAGGTG.............................................................................................................................................................................	25	15	0.13	2	0	0	2	0
........................................................TAAACCGGGGAGGACAAAAAAGG...............................................................................................................................................................................	23	15	0.13	2	2	0	0	0
.................................................................................................................................CGTGTT-ATTCTAAC--AGAACCTGTGGCCG..............................................................................................	28	8	0.13	1	1	0	0	0
.................................................................................................................................CGTGTT-ATTCTAAC--AGAACCT.....................................................................................................	21	8	0.13	1	1	0	0	0
......................................................................................................................................T-ATTCTAAC--AGAACCTGTGGCC...............................................................................................	22	8	0.13	1	1	0	0	0
......................................................................................................................................T-ATTCTAAC--AGAACCTGTGGCCGAT............................................................................................	25	8	0.13	1	0	0	1	0
............................................................................................................................................TAAC--AGAACCTGTGGCCGATT...........................................................................................	21	8	0.13	1	1	0	0	0
...................................................................................................................................TGTT-ATTCTAAC--AGAACCTGTGGCCT..............................................................................................	26	8	0.13	1	1	0	0	0
...................................................................................................................................TGTT-ATTCTAAC--AGAACCTGTGGCCGC.............................................................................................	27	8	0.13	1	1	0	0	0
..................................................................................................................................GTGTT-ATTCTAAC--AGAACCTG....................................................................................................	21	8	0.13	1	1	0	0	0
...................................................................................................................................TGTT-ATTCTAAC--AGAACCTGTGGCC...............................................................................................	25	8	0.13	1	1	0	0	0
..................................................................................................................................................AGAACCTGTGGCCGATTGAAC.......................................................................................	21	8	0.13	1	1	0	0	0
..................................................................................................................................GTGTT-ATTCTAAC--AGAACCTGTGGCCGT.............................................................................................	28	8	0.13	1	1	0	0	0
......................................................................................................................................T-ATTCTAAC--AGAACCTGTGGCCGT.............................................................................................	24	8	0.13	1	1	0	0	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGGTATC............	28	19	0.11	2	2	0	0	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGGTAT.............	27	19	0.11	2	1	0	1	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGGGC........................................	20	19	0.11	2	2	0	0	0
..............................................................................................................................................................................................TCGATCCGGCGGCGATTTTGGGG.........................................	23	19	0.11	2	2	0	0	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGGGCTGATG...................................	25	19	0.11	2	0	0	2	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGAA.....................................................................	23	20	0.10	2	2	0	0	0
.....................AGCGTGTCGTCCCCTATGATGCCATC...............................................................................................................................................................................................................	26	20	0.10	2	1	0	1	0
...........................TCGTCCCCTATGATGCCATCGAAGG..........................................................................................................................................................................................................	25	20	0.10	2	0	0	2	0
........................................................................................................................................................TGTGGCCGATTGAACGCAAAAGGGA.............................................................................	25	20	0.10	2	1	0	1	0
.......................................................................................................................................................................................................................GATGAAGTTTTTGTTAGCGCC..................	21	20	0.10	2	2	0	0	0
.......................CGTGTCGTCCCCTATGATGCCATCGA.............................................................................................................................................................................................................	26	20	0.10	2	1	0	1	0
................................................AAGGTATCTAAACCGGGGAGG.........................................................................................................................................................................................	21	20	0.10	2	2	0	0	0
....................GAGCGTGTCGTCCCCTATGATGCC..................................................................................................................................................................................................................	24	20	0.10	2	2	0	0	0
..............................................................................................................................................................................................................TTTGGGGCTGATGAAGTT..............................	18	20	0.10	2	1	0	0	1
..................TTGAGCGTGTCGTCCCCTATGATGCCA.................................................................................................................................................................................................................	27	20	0.10	2	0	0	1	1
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGT................	24	20	0.10	2	1	0	1	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGT......................................................................	22	20	0.10	2	2	0	0	0
....................................................................................................................................................................AACGCAAAAGGGAGTAGGGAG.....................................................................	21	20	0.10	2	2	0	0	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGT.......................................................................	21	20	0.10	2	2	0	0	0
......................................................................................................TTTTCGAAAAATTTTCCGGCTACG................................................................................................................................	24	20	0.10	2	2	0	0	0
..................................................................................................TAGTTTTTCGAAAAATTTTCCGGCT...................................................................................................................................	25	20	0.10	2	1	0	1	0
.....................................................................................................................................................................................................................CTGATGAAGTTTTTGTTAGCGCC..................	23	20	0.10	2	0	0	2	0
.....................................................ATCTAAACCGGGGAGGACAAAAAAGC...............................................................................................................................................................................	26	15	0.07	1	1	0	0	0
..........................................................AACCGGGGAGGACAAAAAAGGTGAG...........................................................................................................................................................................	25	15	0.07	1	1	0	0	0
.....................................................ATCTAAACCGGGGAGGACAAAAAAGGT..............................................................................................................................................................................	27	15	0.07	1	0	0	1	0
.......................................................CTAAACCGGGGAGGACAAAAAAGG...............................................................................................................................................................................	24	15	0.07	1	1	0	0	0
........................................................TAAACCGGGGAGGACAAAAAAGGTGA............................................................................................................................................................................	26	15	0.07	1	0	0	1	0
.....................................................................ACAAAAAAGGTGAGGGTCGAGT...................................................................................................................................................................	22	15	0.07	1	1	0	0	0
.........................................................................AAAAGGTGAGGGTCGAGTCATT...............................................................................................................................................................	22	15	0.07	1	1	0	0	0
..........................................................AACCGGGGAGGACAAAAAAGGTGAGG..........................................................................................................................................................................	26	15	0.07	1	1	0	0	0
.....................................................ATCTAAACCGGGGAGGACAAAAAAGT...............................................................................................................................................................................	26	15	0.07	1	1	0	0	0
........................................................................................................TTCGAAAAATTTTCCGGCTACGCGGC............................................................................................................................	26	18	0.06	1	1	0	0	0
......................................................................................................TTTTCGAAAAATTTTCCGGCTACGCG..............................................................................................................................	26	18	0.06	1	1	0	0	0
..................................................................................................................................................................................................................................TGTTAGCGCCGGTATCGATCAAGAATT.	27	18	0.06	1	1	0	0	0
...........................................................................................................................................................................................................................................CGGTATCGATCAAGAATTG	19	18	0.06	1	1	0	0	0
....................................................................................................................................................................................................................................TTAGCGCCGGTATCGATCAAGAATTG	26	18	0.06	1	1	0	0	0
........................................................................................................TTCGAAAAATTTTCCGGCTACGCGGCG...........................................................................................................................	27	18	0.06	1	1	0	0	0
.........................................................................................................................................................................................................................TGAAGTTTTTGTTAGCGCCGGTATC............	25	19	0.05	1	0	0	1	0
...............................................................................................................................................................................................CGATCCGGCGGCGATTTTGGGT.........................................	22	19	0.05	1	0	0	1	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGGTC..............	26	19	0.05	1	1	0	0	0
...................................................................................................................................................................................................CCGGCGGCGATTTTGGGG.........................................	18	19	0.05	1	1	0	0	0
.....................................................................................................................................................................................................................CTGATGAAGTTTTTGTTAGCGCCGGTA..............	27	19	0.05	1	0	0	1	0
.......................................................................................................TTTCGAAAAATTTTCCGGCTACGC...............................................................................................................................	24	19	0.05	1	1	0	0	0
..........................................................................................................................................................................................................CGATTTTGGGGCTGATGAAGTT..............................	22	19	0.05	1	1	0	0	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGGGCTG......................................	22	19	0.05	1	1	0	0	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGGGT........................................	20	19	0.05	1	0	0	1	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGGGCTGATGAA.................................	27	19	0.05	1	1	0	0	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGGA...............	25	19	0.05	1	1	0	0	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGGGCTGATGA..................................	26	19	0.05	1	1	0	0	0
..................................................................................................................................................................................................TCCGGCGGCGATTTTGGG..........................................	18	19	0.05	1	1	0	0	0
...............................................................................................................................................................................................CGATCCGGCGGCGATTTTGGGGC........................................	23	19	0.05	1	0	0	1	0
..............................................................................................................................................................................................TCGATCCGGCGGCGATTTTGG...........................................	21	19	0.05	1	1	0	0	0
............................CGTCCCCTATGATGCCATCGAAGGTAT.......................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
..............................................................................................................................................................................................................................TTTTTGTTAGCGCCGGTATCGATCA.......	25	20	0.05	1	0	0	0	1
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGCCGC................	24	20	0.05	1	0	0	1	0
.........................TGTCGTCCCCTATGATGCCATCGAAGGT.........................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0
..............................................................................................................................................................CGATTGAACGCAAAAGGGAGT...........................................................................	21	20	0.05	1	1	0	0	0
......................................................................................................TTTTCGAAAAATTTTCCGGCTA..................................................................................................................................	22	20	0.05	1	1	0	0	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAG.........................................................................	19	20	0.05	1	1	0	0	0
.....................................................ATCTAAACCGGGGAGGACA......................................................................................................................................................................................	19	20	0.05	1	0	0	1	0
.............................................TCGAAGGTATCTAAACCGGGGAGG.........................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
..................TTGAGCGTGTCGTCCCCTATGATGC...................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
............................CGTCCCCTATGATGCCATCGAAGGTA........................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGC......................................................................	22	20	0.05	1	0	0	1	0
....................GAGCGTGTCGTCCCCTATGATGCCAT................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.....................................................................................................................................................................ACGCAAAAGGGAGTAGGGAG.....................................................................	20	20	0.05	1	1	0	0	0
...................TGAGCGTGTCGTCCCCTATGCC.....................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0
.................................................AGGTATCTAAACCGGGGAGGACAAAAA..................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.................................................................................................................................................................TTGAACGCAAAAGGGAGTAGGGAGG....................................................................	25	20	0.05	1	1	0	0	0
.....................................................................................................................................................................................................................................TAGCGCCGGTATCGATCAAGAA...	22	20	0.05	1	1	0	0	0
...................TGAGCGTGTCGTCCCCTATGATG....................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1
...............................................GAAGGTATCTAAACCGGGGAGGACA......................................................................................................................................................................................	25	20	0.05	1	0	0	1	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAG......................	18	20	0.05	1	0	0	1	0
.................................................................................................................................................................TTGAACGCAAAAGGGAGTAGGGAGGA...................................................................	26	20	0.05	1	1	0	0	0
..........................................................................................................................................................TGGCCGATTGAACGCAAAAGGGAGT...........................................................................	25	20	0.05	1	0	0	1	0
.........................TGTCGTCCCCTATGATGCCATCG..............................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0
...........................TCGTCCCCTATGATGCCATCGAAGGTA........................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGGATT....................................................................	24	20	0.05	1	0	0	1	0
....................................................................................................................................................................AACGCAAAAGGGAGTAGGGA......................................................................	20	20	0.05	1	1	0	0	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGT........................................................................	20	20	0.05	1	0	0	1	0
...................................TATGATGCCATCGAAGGTATCTAAA..................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
.....................................................................................................................................................................ACGCAAAAGGGAGTAGGGAGG....................................................................	21	20	0.05	1	1	0	0	0
...................................................GTATCTAAACCGGGGAGGACA......................................................................................................................................................................................	21	20	0.05	1	1	0	0	0
.........................TGTCGTCCCCTATGATGCCATC...............................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
............................CGTCCCCTATGATGCCATCGAAGGT.........................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
..................................................................................................................................................................TGAACGCAAAAGGGAGTAGGAG......................................................................	22	20	0.05	1	1	0	0	0
...............................................................................................................................................................................................................................TTTTGTTAGCGCCGGTATCGAT.........	22	20	0.05	1	0	0	1	0
....................GAGCGTGTCGTCCCCTATGATGCCA.................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
........................................................................................................TTCGAAAAATTTTCCGGCTA..................................................................................................................................	20	20	0.05	1	1	0	0	0
....................................................................................................................................................................AACGCAAAAGGGAGTAGGGAGG....................................................................	22	20	0.05	1	1	0	0	0
......................................................................................................................................................................................................................TGATGAAGTTTTTGTTAGCGC...................	21	20	0.05	1	1	0	0	0
....................................................................................................................................................................AACGCAAAAGGGAGTAGGG.......................................................................	19	20	0.05	1	1	0	0	0
...............................CCCCTATGATGCCATCGAAGGTATC......................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
....................................................................................................................................................................AACGCAAAAGGGAGTAGGGT......................................................................	20	20	0.05	1	1	0	0	0
...........................................CATCGAAGGTATCTAAACCGG..............................................................................................................................................................................................	21	20	0.05	1	1	0	0	0
...........................................................................................................................................................GGCCGATTGAACGCAAAAGGGA.............................................................................	22	20	0.05	1	1	0	0	0
........................................................................................................................................................................................................................ATGAAGTTTTTGTTAGCGC...................	19	20	0.05	1	1	0	0	0
......................GCGTGTCGTCCCCTATGATGCCA.................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
..............................TCCCCTATGATGCCATCGAAGGTATC......................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0
....................................................................................................GTTTTTCGAAAAATTTTCCGGCTA..................................................................................................................................	24	20	0.05	1	1	0	0	0
..............................TCCCCTATGATGCCATCGAAGGTT........................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
....................GAGCGTGTCGTCCCCTATGATGCCATC...............................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
..........................GTCGTCCCCTATGATGCCATCGAAGG..........................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.......................................................................................................................................................................................................................GATGAAGTTTTTGTTAGCGCCG.................	22	20	0.05	1	1	0	0	0
........................................TGCCATCGAAGGTATCTAAACCGG..............................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
.........................TGTCGTCCCCTATGATGCCATCGAAG...........................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
..........................................................................................................................................................................................................................GAAGTTTTTGTTAGCGCCT.................	19	20	0.05	1	1	0	0	0
..........................GTCGTCCCCTATGATGCCATCGAAG...........................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
......................................................TCTAAACCGGGGAGGACAAAAA..................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
......................GCGTGTCGTCCCCTATGATGCCATCGA.............................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
...........................TCGTCCCCTATGATGCCATCGAAGGTATC......................................................................................................................................................................................................	29	20	0.05	1	1	0	0	0
.....................AGCGTGTCGTCCCCTATGATGCC..................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0

droYak3

ATGAGGGCATTAACTGCCTTCAGGGTATCATCGCCAATGATCCCATCGAAGGAACGCAAACTTGGAAGGACAAAAAAGGTGGTGGTCGTATTGTTGCCTAATTCTTAGAAATATTTTCCTTCAAGGCTATGGGTA-ATTCTCAA--TGTGCCCGCGGCGGACTGGACATCAAAAGGAGTGCGAAGGGGTTTCGAACCGGTGGCAATTTTGGGGCTAATGAAGTTTTTATTTGCACCGGTGTCTATAAGGAAGTG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....................................................................................................................................TA-ATTCTCAA--TGTGCCCGCGGCGG..............................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

ATCAGGGCTTTTAATGCCTTGAGGGTATCATCGCCTATCATATCGTTACAGGAGCTTAGTCCGGGAAGGACAACGAAGGTGAGAACTATATTGTTTCCAATTGTATTAAAAAATGGTCCGGTAAGACGTTGCGTG-AATTTCAT--AGCGCCCGCAG-AGACTGGACAA-----AGGGTGTTGAGGGTTTTTGCACCGGCAGAATTTCTGGAGCTTACACAATTCTTATTAGCGCCGGTGTCTATGAGGAATTG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dvi_21330

scaffold_13050:2142670-2142820 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-29.6	-29.5	-29.5