ID:

dvi_21311

Coordinate:

scaffold_13050:1379607-1379757 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.7 -18.2 -18.1

Flybase annnotation

CDS [Dvir\GJ18437-cds]; exon [dvir_GLEANR_3113:3]; intron [Dvir\GJ18437-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGGGTCGGCGATGTCTGCTATGCGTTACAATATGCTCCTAACATATATAATATAGCTGCGATAGGAAAGATCGGTGTAAAAGTAGGATCTTATATGGCAAAATATTCTGTTTCCTCGTTTTTTTTTAAGTGTATTTGTAATTTAACTCTGTATTAAAACTGTCCACCAGTTATGTTCTAATTTGGTTTTTTTTTATTTCAGGAAGTCGAAGAACGGTTTCGAAAGGCTATGATAACGAATGCCCAACTAGA
**************************************************((((((((.(((((....((((((.((((((..((((....((((......))))......))))..)))).......................)).))).)))....)))))...))))))))...........................**************************************************
Read size # Mismatch Hit Count Total Norm Total M047
female body
GSM1528803
follicle cells
M061
embryo
SRR060654
160x9_ovaries_total
SRR060655
9x160_testes_total
SRR060656
9x160_ovaries_total
SRR060661
160x9_0-2h_embryos_total
SRR060663
160_0-2h_embryos_total
SRR060678
9x140_testes_total
SRR060679
140x9_testes_total
SRR060687
9_0-2h_embryos_total
SRR060688
160_ovaries_total
SRR1106720
embryo_8-10h
V047
embryo
SRR060658
140_ovaries_total
SRR060681
Argx9_testes_total
SRR060682
9x140_0-2h_embryos_total
.........................................................................................................................................................................................................................TTCAAAAGGCTATGATAACGAAT........... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................TATGATAACGAATGCCCAAC.... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AGAACTGTTTCGAAAGGCTATGAT.................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAAAGAAGTCGAAGAACGGTTTCGAAA........................... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GAACGGTTTCGAAAGGCT....................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AAGAAGTCGAAGAACGGTTTCG.............................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GAAAGGCTATGATAACGAATG.......... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTGGTTTTTTTTTATTTCAG.................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGAAGTCGAAGAACGGTTTCGAAAGGC........................ 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTAAAGAAGTCGAAGAACGGTTTCGA............................. 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAAAGAAGTCGAAGAACGGTTTCGA............................. 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................GAAGAACGGTTTCGAAAGGC........................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTCGAAGAACGGTTTCGAAAGGCTATG.................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTCGAAGAACGGTTTCGAAA........................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CGAAGAACGGTTTCGAAAGGC........................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATGTTCGAAGTTGGTTTTTT............................................................ 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................TGGAATATAACTCAGTATTAAA.............................................................................................. 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................TGGGAAAGGACGGTGTAAAA.......................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...GTCGGCGATGTCGGCTACCC.................................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................AGAACAGTCTGGAAAGGCT....................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CCCCAGCCGCTACAGACGATACGCAATGTTATACGAGGATTGTATATATTATATCGACGCTATCCTTTCTAGCCACATTTTCATCCTAGAATATACCGTTTTATAAGACAAAGGAGCAAAAAAAAATTCACATAAACATTAAATTGAGACATAATTTTGACAGGTGGTCAATACAAGATTAAACCAAAAAAAAATAAAGTCCTTCAGCTTCTTGCCAAAGCTTTCCGATACTATTGCTTACGGGTTGATCT
**************************************************((((((((.(((((....((((((.((((((..((((....((((......))))......))))..)))).......................)).))).)))....)))))...))))))))...........................**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR060674
9x140_ovaries_total
SRR060678
9x140_testes_total
SRR060672
9x160_females_carcasses_total
V053
head
.............................................................................................................................................................................................AAAAATTGAGTCCATCAGCTT......................................... 21 3 3 0.33 1 1 0 0 0
..................................................................................ATCGAAGAATATACTGTTTTATAAGAC.............................................................................................................................................. 27 3 11 0.18 2 0 2 0 0
..........................................................................................................................................................................................AAAAAAAAAAAAGTCCTTC.............................................. 19 1 12 0.08 1 0 0 1 0
......................................ATTGTAGATCTTATATCGCC................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13050:1379557-1379807 - dvi_21311 GGGGTCG-GCGATGTCTGCT---ATG-CGTTACAATATGC---TC--CTAACATATATAATATAGCTG-----CGA------TAGGAAAGATCGGTGTAAAAGTAGGA--TCTTATATGG--C------------------------------------------------------------------------------------------------AAAATATTCTGT----TTC--------CTCGT--------------------------------------------------------------------------------T-TTTTTTTAAGTGT-ATTTGTAATTTAAC-------------------------TCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAA---AACTGTCCACCA-------GTTATGTTCTAATTTGGTT-----TTTTT--TTATTT-------------------------------------------------------------CAGGAAG-TCGAAGAACGGTTT----------------------------------------------------------------------------------------------------------------CGAAAG----GCTATGATA---AC---------GAATGCCCAAC---TAGA
droMoj3 scaffold_6500:3885330-3885530 - GGGGTCT-GCGATGATTCCTTCTGTC-TGTTATATACTTT-------TC-ACAAAACCATTATACCCTGATTTCCCATTTTCTATGGGTTCAGGGTATAAAAAAAAG---T--GAG-----------------------------------------------------------------------------ATAATTT-------------------------TTCTAAGT-G---TGCCTCGT------------------------------------A-------------------------------------------------------TTTAAAGT-AATTATATATAAAC-------------------------TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATATAATAATTTATTTTTATTTTA---------------------T------------------------------------------------------------------------------------------------------------------------TTATTTTTTTTTTTTT---------------------------------------------------------------------------------------------------------TCA
droGri2 scaffold_15110:7802679-7802860 - GAGGTCG-GAGATGCTTCTTTCTGCC-TGTTACATACATT-------TGCACCCTTT----TTACCCGTTT---TT------TATGGGTTCAGGGTATAAACATTCGA--TTT----TAT--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ATAATATTATTGATTT-----------------------------------------CATTTTATTAAAAAGCGTACA-------------------------------------------------------------------------------------AATTACATT---TA----TATTAATTTTACTGACTACCA------------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------AAA-----TG-------------GT-------------------------TACTAAG---CTGG
droWil2 scf2_1100000004967:586206-586467 + GGGGTCG-GAAACGTCTTCTTCTGTG-CGTTACAAACATC-------TGACCAATTTTATAACACCCTC-------------TGC-----AAGGGTATAAAAATGTACAGT--GAATCAC--ATTAATATTCGGTTTTTTCTTTTT-----------------------------------------------------CTCAAC------TTT----------------------------------------------------------GAGC-------------------------------------------------------------------------------------------------------------------GCCAGTAACTCTTCTTAATTTAGCTGAAATTTAAAAATTTTAAATGC------------TAAG---------TAATAG-------------------------------------------------------------------------------------------------------------------TTTAGA-------A-----TGTTT--TCTATC-------------------------------------------------------------CAT--------------------------------------------------------------------------------------------------AAAGGC-----GTATTACAATAAATTT---TA-TTCAAA----ACTAAAAAA---GA---------AAATATCCAAA---AACA
dp5 Unknown_singleton_426:620-853 + GGGGTTGGGAAACGATTCCTTCTGGA-CGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATA-CTCAT----TTTGAGTATCGGGTATAAAAATACTA--T--GAACTATTAAAAGACATTTCGTTGTG--TGTATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTG--------------------------------------------GTAG----------------------AAACGTACAAATATATTTGAACTGTAACTGTACTAAAATGTGAATTAAAGTTAACCAACAAATCCA--------------------------------------------------------------------------GTTAT-------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------TCAGA----GCTGCTCT-------------------------T---TTTT
droPer2 scaffold_286:4866-5067 + AGGGTCG-GAAACGATTCCTTCTGGA-CGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATA-CTCAT----TTTGAGTATCGGGTATAATAAATATA--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATTTAACCACTAT-TTATTTTAAATGT-TTCTGT--TTTACTTTTGATTG-GTTGAATTTCACTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TTATT--------------------------------------------A-----------------CAAGAGAATCATAGGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------CCTTT---GAAA
droAna3 scaffold_13337:22785837-22786072 - AGGGTCG-AAGATGTCTCCTTCACTG-CGTTGCACACTTT-------TGACCAAAATTATAATACCCTC-------------TGC-----AAGGGTATAAAAAAACAA--TCTGATTTGT--C-----------------AAATTTCATATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--------------------------------------------------------------CGGCCGTCTATATCCTATAGCTG--TCATATAACTGATTGATCGGAAGTGCTATAACTTCGTTGTTTTTCA------------------AG-TTAGAA-----GAATGGCAAAATAATTCGATT-TGCCAA----ATT-TCATA---AG-----AATC----GGTCAAC---TATA
droBip1 scf7180000395681:8712-8931 + AGGGTCG-GAGATGTCTCCTTCACTGCCCTAGCACACTTT-------TGGACAAAATTACAATACTCTC-------------TGC-----AAGGGTATAAAAATGTTA--TCCTTTTTGT--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AAAAAATTTAAGATCC-----------------------------------------ATTTTTTTTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGCAACAACATTTAACTAATGAA-------------ATCGTCGGAAATTTTCAAATCGGTTTAAAATTATGCGTTTAGGAATTTTTAAGAGCAAAAC-----AGTC----------------------------------------CCGAA---AAAC
droKik1 scf7180000302225:15625-15858 - AGGGTCG-GTGATGATTCCTTCACTG-CGTTGCCAACATC-------TGACTAAAATTATAAAACCCT---------------GC-----TAGGGTATCAAAATATAA--C---------------------------------------------------------------------------------------------------------------------------------------TTCGC--ATTTTTTACATTTTACCATTTTCTTTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT------------------------GAT----------------AATTTCTTTTTGTTTCA---GAAT-----AAT--TTTCTGCAAAT--------------------------CGGATGATTATAAGCTTTGTTAAATGT-----AA------------------------------------------------------------------------------------------------------------CTCCAAAAC-----TGTTGTAAAAGTCTAAAA-TAATA---TG-----TAAT----GGTCAAT---TTAA
droFic1 scf7180000454077:92019-92233 + GGGGTCT-GAGGTGTCTCCTTCACTG-CGTTGCAAACTTC-------TGACTGAAATTATAATACCCTTTTG-CTC------TGC-----AAGGGTATAATAAGGCAT--TTTAATTTAT--T-----------------A--------------------------------------------------------------TAA-----------------------AATAAAAAC--------TTCGT-------------------------------T-------------------------------------------------------TT--TTAT-GTTCTAAATATATT-------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTA-----TGAC--TTGTATAAAATGTTAAAATACAATTTAGTCTACTTCT---------T-----------------CATGAGAACCC-TG-----------------------------------------------------------------------------------------------------------AAA-----TGCTCTGAAT--------------------------------------G---GCTA
droEle1 scf7180000487178:10949-11174 - AGGGTCG-GAGATGTCTCATTCACTG-CGTTGCAAACTTC-------TGACTGAAATTATAATACCCCC-------------TGC-----AAGAGTATAAAAAAATT---T--AA-----------------------------------------------------------------------------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGTAACTCTTTTATTTCTTAATATTTTTTAAAAATTCTTTTTCA------------TAAATTAATAATATGACAG-------------------------------------------------------------------------------------------------------------------TTCAGAATTGCG--CTTTT-----AAT--TTTATTAAAAT--------------------------------------------------------------CGGAAAAAGATATC----------------------------------------------------------------------------------------------------------------ATATA----GCTGCTATA----G-----GAAC----AATCAAA---TAAG
droRho1 scf7180000777214:32063-32350 + GGGGTCG-GAAACGTCTCCTTCACTG-CGTTACAAACTTC-------TGACCAAAATTATAATACCCTC-------------TGC-----AAGGGTATAAAAAGGAAA--C--A--------------------------------------------------------------------------------TA-------TAA----------AATAA-AT----------G---AACCCCAT------------------------------------GTATGGATTTTATAGAATTGTATAATTAAAGTATTACCATAACTCATTGTCTTGTTTTAAATGATTTTTGT--TTAATTTTTCCTAGTGTAGATTTACACATTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------CATAAATATCTATTTAGTT-----TTCTT--TGACCA-------------------------------------------------------------TATGCAG-TCGAAAAAAAACTA----------------------------------------------------------------------------------------------------------------TAAAAA----AT--TGAAA---GC---------AATTTGCCAAG---AAGA
droBia1 scf7180000302074:2224-2464 + GGGGTCG-GAAACGCTTCTTTCA-CC-TATTACAAACTTT-------CTGACCAATCTAATATACCCTTTT--CTC------TATGAGTAACGGGTATAAAAATTATA--T--AATAATTTAATAATTTTTTCGTTATC--AATTTTATCAGAA------------------------------------TAAGAGGACTTTAAC------CTC----------------------------------------------------------CTGCGCTTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAACATTTTTTA--------------------------------ATTATCTCTAAATTTCG---CTTT-----AAT--TTTATCAAAAT--------------------------------------------------------------CGGACGACTGTATA----------------------------------------------------------------------------------------------------------------ACATA----GCTGTCATA------------------------G---GGAA
droTak1 scf7180000410832:2363-2564 - TATATCA-TATA----------GCTG-CGATAGGAACGAT-------CG---------------------------------------------GAAAATTAATGGGA--------------------------------------------------------------------------------------------------ATATAATTGGAAATAAATTA-T-------TGC--------TTCGTTGGTTTTTATTGTATTCTCTTCTACTCTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT------------------------AACTCTTTTCTA-------AATATTTTCGAATTTCT--ATTTT-----AAT--TTTATCAAAAT--------------------------------------------------------------CGAACTACTATATC----------------------------------------------------------------------------------------------------------------ATATA----GCTGCCATTGAAAC---------GAAC--GCAAA---ATTA
droEug1 scf7180000409768:1088174-1088407 - AGCGTCG-GAAACGCATCCTTAT-AC-TGTTAGATACTTT-------CGAACGAATCTAATATACCCTTATA-CTC------TACGAGTAATGGGTATAAAAAATAG---T--GATT-----A-----------------CATTTTTAGGTAAATAGTTAATTATT------------------TACTATCACTGGAACCTTAAC------CTT----------------------------------------------------------TGATGCC-------------------------------------------------------------------------------------------------------------------AAAAA--------------------------------------------------------------------------------------------------------------------------------------------ACTGTGTC--------------------------------ATGTTCTTG-AAATTAATCATTT-----TGGA--TAGCACAAAAA--------------------------------------------------------------CGGAAAACATT-------------------------------------------------------------------------------------------------------------AATT-CGTAAA----GCTATCACA-------------------------------A
dm3 chr4:470344-470592 + ATGGTCG-GAAACTCTTCCTTCTACC-TGTTACATACTTT-------TCAACGAATCTAGTATACTCTT-TA-CTC------T-------ACGGGTATAAAAACCTAT--T---A-----------------------------------------------------------------------------GGAAAGCGTTAACAGAGTGTTTGCGCAAAAATCT-T-------TAT--------TTCCTTGGCTTTTTATATTGATTTTCTTGT-------------------------------------------------------------------------------TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAACTCGTTCTTGTTGTTTCCTTAATTTACTTTCTTTTCA------------------CGTTTAGGT-----TCAGTGCAAATC--------------------ATTTCGATG---GC---------AAATGTCTAAATGGAACG
droSim2 x:19183663-19183858 - ATAGTCG-GAAACGCTTCCTTCG-CC-TGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTA-CTT------TGCGAGTAACGGGTATAAAAAGAAAA--T--G--------------------------------------------------------------------------------CA-------AAA----------GAGAAAATGTTCTAATTAA---CGCTCCAT------------------------------------T-------------------------------------------------------TCAGGGAT-GGTCATAATATATT-------------------------TGTGCGCCA----------------------------------------------------------------------ACA---------------------------------------------------------------------------------------------------------------CTTATACCATTT-------------------------------------------------------------------------------------------------------GATAGT----------------------------------------------------------------------------------------------------------------ACATT----GTTATT-------------------------TTG---GGAA
droSec2 scaffold_26:203453-203705 + ATGGTCG-GAAACGCTTCCTTCTACC-AGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTA-CTC------TACAAGTAACGGGTATAAATAACATG--T--GTT--------------------ATC--ATTTATATATGAA------------------------------------------------------------------------------------------------------------------------------GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAATTTTTTTAA----ATTTAA-------------------------ATTTTCAAACTTTG---ATTT------AC--TGTTTTCTGTT--------------------------CCGATTGTCGCGTTTTCTTTTGAACCTAACCAAG-GTAAAGATC----------------------------------------------------------------------------------------------------------------AGTT-CCCCAA----GGCATCGTGACTTTGAATGTAAA----CACTTAC---TAGA
droYak3 3R:7144962-7145191 + ATGGTCG-GAAACGCTTCCTTCTGCC-TGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTA-CTC------TACGAGTAACGGGTATAATAAGCTT---T--GGTTTAT--A-----------------CATTTTCATTAGA-T--TTAATTTTATAAACAAATATTTCATAA------AATGAA-------ACA----------GTAATAATGT-T-------TAT--------TATGT---TATTTAATATTTGTGTAGTTGT-------------------------------------------------------------------------------TTT---------------------------------------------------------AG----------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-TTG-CAAACGTTTT----------------------------------------------------------------------------------------------------------------CAAGAT----GTTACCATA------------------------------AC
droEre2 scaffold_4929:21807677-21807873 + ATGGTCG-GAAACGTTTCCTTCTACC-TGTTACATACTTT-------GCGACAAATCTGGTATACCCTTTTA-TTC------TACAAATAACAGGAATACAAAACTGG--T--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTGTTTTGGTGTTTCATTTTTAATTAAGGTTTTTTTTCTTAATTATATAAT---TACTGCCTACCGAAGCTAAATTTTTTTCTTATTTTA---------------------TTTTATT--------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGGGTCG-GCGATGTCTGCT---ATG-CGTTACAATATGC---TC--CTAACATATATAATATAGCTG-----CGA------TAGGAAAGATCGGTGTAAAAGTAGGA--TCTTATATGG--C------------------------------------------------------------------------------------------------AAAATATTCTGT----TTC--------CTCGT--------------------------------------------------------------------------------T-TTTTTTTAAGTGT-ATTTGTAATTTAAC-------------------------TCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAA---AACTGTCCACCA-------GTTATGTTCTAATTTGGTT-----TTTTT--TTATTT-------------------------------------------------------------CAGGAAG-TCGAAGAACGGTTT----------------------------------------------------------------------------------------------------------------CGAAAG----GCTATGATA---AC---------GAATGCCCAAC---TAGASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGATA---AC---------GAATGCCCAAC---....2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGTTT----------------------------------------------------------------------------------------------------------------CGAAAG----GCT......................................1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAG----GCTATGATA---AC---------GAATG.............2111.001000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTT-----TTTTT--TTATTT-------------------------------------------------------------CAG......................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACGGTTT----------------------------------------------------------------------------------------------------------------CGAAAG----GC.......................................2011.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TCGAAGAACGGTTT----------------------------------------------------------------------------------------------------------------CGAAAG----GCTATG...................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TCGAAGAACGGTTT----------------------------------------------------------------------------------------------------------------CGAAA..............................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAACGGTTT----------------------------------------------------------------------------------------------------------------CGAAAG----GC.......................................2111.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
GGGGTCT-GCGATGATTCCTTCTGTC-TGTTATATACTTT-------TC-ACAAAACCATTATACCCTGATTTCCCATTTTCTATGGGTTCAGGGTATAAAAAAAAG---T--GAG-----------------------------------------------------------------------------ATAATTT-------------------------TTCTAAGT-G---TGCCTCGT------------------------------------A-------------------------------------------------------TTTAAAGT-AATTATATATAAAC-------------------------TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATATAATAATTTATTTTTATTTTA---------------------T------------------------------------------------------------------------------------------------------------------------TTATTTTTTTTTTTTT---------------------------------------------------------------------------------------------------------TCASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..............................TATATACTTT-------TC-ACAAAACCATTATACCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29110.182100010
..............................TATATACTTT-------TC-ACAAAACCATTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.172100010
...................................................................TGATTTCCCATTTTCTATGGGTTCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141100000
..............................TATATACTTT-------TC-ACAAAACCATTATACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28110.091000010
droGri2
GAGGTCG-GAGATGCTTCTTTCTGCC-TGTTACATACATT-------TGCACCCTTT----TTACCCGTTT---TT------TATGGGTTCAGGGTATAAACATTCGA--TTT----TAT--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ATAATATTATTGATTT-----------------------------------------CATTTTATTAAAAAGCGTACA-------------------------------------------------------------------------------------AATTACATT---TA----TATTAATTTTACTGACTACCA------------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------AAA-----TG-------------GT-------------------------TACTAAG---CTGGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droWil2
GGGGTCG-GAAACGTCTTCTTCTGTG-CGTTACAAACATC-------TGACCAATTTTATAACACCCTC-------------TGC-----AAGGGTATAAAAATGTACAGT--GAATCAC--ATTAATATTCGGTTTTTTCTTTTT-----------------------------------------------------CTCAAC------TTT----------------------------------------------------------GAGC-------------------------------------------------------------------------------------------------------------------GCCAGTAACTCTTCTTAATTTAGCTGAAATTTAAAAATTTTAAATGC------------TAAG---------TAATAG-------------------------------------------------------------------------------------------------------------------TTTAGA-------A-----TGTTT--TCTATC-------------------------------------------------------------CAT--------------------------------------------------------------------------------------------------AAAGGC-----GTATTACAATAAATTT---TA-TTCAAA----ACTAAAAAA---GA---------AAATATCCAAA---AACASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.....................CTGTG-CGTTACAAACATC-------TGACCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.20404000
.........................................................................................................TACAGT--GAATCAC--ATTAATATTCGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.20200020
........................TG-CGTTACAAACATC-------TGACCAATTTTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
....................................CATC-------TGACCAATTTTATAACACCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.10101000
.........................................................................................................TACAGT--GAATCAC--ATTAATATTCGGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28100.10100010
.........................................................................................................TACAGT--GAATCAC--ATTAATATTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.09101000
.........................................................................................................TACAGT--GAATCAC--ATTAATATTCGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.09100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAG-------------------------------------------------------------------------------------------------------------------TTTAGA-------A-----TGTTT--TCTAT.......................................................................................................................................................................................................................................................23130.08101000
................................................GACCAATTTTATAACACCCTC-------------TGC-----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.08101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAG-------------------------------------------------------------------------------------------------------------------TTTAGA-------A-----TGTTT--TCT.........................................................................................................................................................................................................................................................19140.07100010
..........................................................................................................................ATTAATATTCGGTTTTTTCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.06101000
......................................................................................................................AC--ATTAATATTCGGTTTTTTCTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
.........AAACGTCTTCTTCTGTG-CGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100
dp5
GGGGTTGGGAAACGATTCCTTCTGGA-CGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATA-CTCAT----TTTGAGTATCGGGTATAAAAATACTA--T--GAACTATTAAAAGACATTTCGTTGTG--TGTATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTG--------------------------------------------GTAG----------------------AAACGTACAAATATATTTGAACTGTAACTGTACTAAAATGTGAATTAAAGTTAACCAACAAATCCA--------------------------------------------------------------------------GTTAT-------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------TCAGA----GCTGCTCT-------------------------T---TTTTSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.............................................TTACCACAAATCTAATATACCCCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25207.40148014800000000
.....TGGGAAACGATTCCTTCTGGA-CGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2446.752709100001700
.....TGGGAAACGATTCCTTCTGGA-CG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2343.751501130100000
................TCCTTCTGGA-CGTTACACACATCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.753503500000000
.............................................TTACCACAAATCTAATATACCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.651300000001300
...........................................................................CAT----TTTGAGTATCGGGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.551101100000000
.....TGGGAAACGATTCCTTCTGGA-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.5020020000000
.....TGGGAAACGATTCCTTCTGGA-CGTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.5020200000000
......GGGAAACGATTCCTTCTGGA-CGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.4020000000200
......GGGAAACGATTCCTTCTGGA-CG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.4020200000000
.....TGGGAAACGATTCCTTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
.............................................TTACCACAAATCTAATATACCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000100400
.....TGGGAAACGATTCCTTCTGGA-CGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
.....TGGGAAACGATTCCTTCTGGA-CGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010010000000
..........AACGATTCCTTCTGGA-CGTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040400000000
..............................................TACCACAAATCTAATATACCCCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000400
.....TGGGAAACGATTCCTTCTGGA-CGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710010000000
...................................................CAAATCTAATATACCCCAATA-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530030000000
.....TGGGAAACGATTCCTTCTGGA-CGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110100000000
..............................................TACCACAAATCTAATATACCCCAATA-CTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.1020200000000
..........................................................................TCAT----TTTGAGTATCGGGTATAAAAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020200000000
.................CCTTCTGGA-CGTTACACACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000002000
........GAAACGATTCCTTCTGGA-CGTTACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
..................CTTCTGGA-CGTTACACACATCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
....................................................................................TGAGTATCGGGTATAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
...........................................................................CAT----TTTGAGTATCGGGTATAAAAATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000001000
..............ATTCCTTCTGGA-CGTTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000010
..............................................TACCACAAATCTAATATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.........................................................TAATATACCCCAATA-CTCAT----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
.......................................................................A-CTCAT----TTTGAGTATCGGGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..................................................................................TTTGAGTATCGGGTATAAAAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
...................................................................................TTGAGTATCGGGTATAAAAATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
....................................................AAATCTAATATACCCCAATA-CT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
................................................CCACAAATCTAATATACCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.........................................................................CTCAT----TTTGAGTATCGGGTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
...........................................TTTTACCACAAATCTAATATACCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
droPer2
AGGGTCG-GAAACGATTCCTTCTGGA-CGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATA-CTCAT----TTTGAGTATCGGGTATAATAAATATA--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATTTAACCACTAT-TTATTTTAAATGT-TTCTGT--TTTACTTTTGATTG-GTTGAATTTCACTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TTATT--------------------------------------------A-----------------CAAGAGAATCATAGGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------CCTTT---GAAASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.....CG-GAAACGATTCCTTCTGGA-CGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.306060000
...............TTCCTTCTGGA-CGTTACACACATCCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204040000
..................................................................................................................................................................................................................................................................................................................................................TTAAATGT-TTCTGT--TTTACTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
...............................................................................................................................................................................................................................................................................................................................................ATTTTAAATGT-TTCTGT--TTTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.131010000
.........................................................................................................................................................................................................................................................................................................................................................................TTTGATTG-GTTGAATTTCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102011000
.........................................................................................................................................................................................................................................................................................................................................................T-TTCTGT--TTTACTTTTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..........................................................................................................TA--A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATTTAACCACTAT-TTATTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................ATTG-GTTGAATTTCACTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------................................................................................................................................................................................................................................................................20200.051010000
...........................................................................................................................................................................................................................................................................................................................................................TTCTGT--TTTACTTTTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
................................................................................................................................................................................................................................................................................................................................................................................G-GTTGAATTTCACTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TTAT........................................................................................................................................................................................................................................................23200.051010000
...........................................TTTTACCACAAATCTAATATACCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................TG-GTTGAATTTCACTTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TTA.........................................................................................................................................................................................................................................................23200.051010000
droAna3
AGGGTCG-AAGATGTCTCCTTCACTG-CGTTGCACACTTT-------TGACCAAAATTATAATACCCTC-------------TGC-----AAGGGTATAAAAAAACAA--TCTGATTTGT--C-----------------AAATTTCATATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--------------------------------------------------------------CGGCCGTCTATATCCTATAGCTG--TCATATAACTGATTGATCGGAAGTGCTATAACTTCGTTGTTTTTCA------------------AG-TTAGAA-----GAATGGCAAAATAATTCGATT-TGCCAA----ATT-TCATA---AG-----AATC----GGTCAAC---TATASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATTGATCGGAAGTGCTG...........................................................................................................................2190.111000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGTTTTTCA------------------AG-TTAGAA-----GAATG....................................................................26200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACTGATTGATCGGAAGTGC.............................................................................................................................23200.051010000
droBip1
AGGGTCG-GAGATGTCTCCTTCACTGCCCTAGCACACTTT-------TGGACAAAATTACAATACTCTC-------------TGC-----AAGGGTATAAAAATGTTA--TCCTTTTTGT--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AAAAAATTTAAGATCC-----------------------------------------ATTTTTTTTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGCAACAACATTTAACTAATGAA-------------ATCGTCGGAAATTTTCAAATCGGTTTAAAATTATGCGTTTAGGAATTTTTAAGAGCAAAAC-----AGTC----------------------------------------CCGAA---AAACSizeHit CountTotal NormTotal
No Reads
droKik1
AGGGTCG-GTGATGATTCCTTCACTG-CGTTGCCAACATC-------TGACTAAAATTATAAAACCCT---------------GC-----TAGGGTATCAAAATATAA--C---------------------------------------------------------------------------------------------------------------------------------------TTCGC--ATTTTTTACATTTTACCATTTTCTTTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT------------------------GAT----------------AATTTCTTTTTGTTTCA---GAAT-----AAT--TTTCTGCAAAT--------------------------CGGATGATTATAAGCTTTGTTAAATGT-----AA------------------------------------------------------------------------------------------------------------CTCCAAAAC-----TGTTGTAAAAGTCTAAAA-TAATA---TG-----TAAT----GGTCAAT---TTAASizeHit CountTotal NormTotal
No Reads
droFic1
GGGGTCT-GAGGTGTCTCCTTCACTG-CGTTGCAAACTTC-------TGACTGAAATTATAATACCCTTTTG-CTC------TGC-----AAGGGTATAATAAGGCAT--TTTAATTTAT--T-----------------A--------------------------------------------------------------TAA-----------------------AATAAAAAC--------TTCGT-------------------------------T-------------------------------------------------------TT--TTAT-GTTCTAAATATATT-------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTA-----TGAC--TTGTATAAAATGTTAAAATACAATTTAGTCTACTTCT---------T-----------------CATGAGAACCC-TG-----------------------------------------------------------------------------------------------------------AAA-----TGCTCTGAAT--------------------------------------G---GCTASizeHit CountTotal NormTotal
No Reads
droEle1
AGGGTCG-GAGATGTCTCATTCACTG-CGTTGCAAACTTC-------TGACTGAAATTATAATACCCCC-------------TGC-----AAGAGTATAAAAAAATT---T--AA-----------------------------------------------------------------------------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGTAACTCTTTTATTTCTTAATATTTTTTAAAAATTCTTTTTCA------------TAAATTAATAATATGACAG-------------------------------------------------------------------------------------------------------------------TTCAGAATTGCG--CTTTT-----AAT--TTTATTAAAAT--------------------------------------------------------------CGGAAAAAGATATC----------------------------------------------------------------------------------------------------------------ATATA----GCTGCTATA----G-----GAAC----AATCAAA---TAAGSizeHit CountTotal NormTotal
No Reads
droRho1
GGGGTCG-GAAACGTCTCCTTCACTG-CGTTACAAACTTC-------TGACCAAAATTATAATACCCTC-------------TGC-----AAGGGTATAAAAAGGAAA--C--A--------------------------------------------------------------------------------TA-------TAA----------AATAA-AT----------G---AACCCCAT------------------------------------GTATGGATTTTATAGAATTGTATAATTAAAGTATTACCATAACTCATTGTCTTGTTTTAAATGATTTTTGT--TTAATTTTTCCTAGTGTAGATTTACACATTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------CATAAATATCTATTTAGTT-----TTCTT--TGACCA-------------------------------------------------------------TATGCAG-TCGAAAAAAAACTA----------------------------------------------------------------------------------------------------------------TAAAAA----AT--TGAAA---GC---------AATTTGCCAAG---AAGASizeHit CountTotal NormTotal
No Reads
droBia1
GGGGTCG-GAAACGCTTCTTTCA-CC-TATTACAAACTTT-------CTGACCAATCTAATATACCCTTTT--CTC------TATGAGTAACGGGTATAAAAATTATA--T--AATAATTTAATAATTTTTTCGTTATC--AATTTTATCAGAA------------------------------------TAAGAGGACTTTAAC------CTC----------------------------------------------------------CTGCGCTTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAACATTTTTTA--------------------------------ATTATCTCTAAATTTCG---CTTT-----AAT--TTTATCAAAAT--------------------------------------------------------------CGGACGACTGTATA----------------------------------------------------------------------------------------------------------------ACATA----GCTGTCATA------------------------G---GGAASizeHit CountTotal NormTotal
No Reads
droTak1
TATATCA-TATA----------GCTG-CGATAGGAACGAT-------CG---------------------------------------------GAAAATTAATGGGA--------------------------------------------------------------------------------------------------ATATAATTGGAAATAAATTA-T-------TGC--------TTCGTTGGTTTTTATTGTATTCTCTTCTACTCTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT------------------------AACTCTTTTCTA-------AATATTTTCGAATTTCT--ATTTT-----AAT--TTTATCAAAAT--------------------------------------------------------------CGAACTACTATATC----------------------------------------------------------------------------------------------------------------ATATA----GCTGCCATTGAAAC---------GAAC--GCAAA---ATTASizeHit CountTotal NormTotal
No Reads
droEug1
AGCGTCG-GAAACGCATCCTTAT-AC-TGTTAGATACTTT-------CGAACGAATCTAATATACCCTTATA-CTC------TACGAGTAATGGGTATAAAAAATAG---T--GATT-----A-----------------CATTTTTAGGTAAATAGTTAATTATT------------------TACTATCACTGGAACCTTAAC------CTT----------------------------------------------------------TGATGCC-------------------------------------------------------------------------------------------------------------------AAAAA--------------------------------------------------------------------------------------------------------------------------------------------ACTGTGTC--------------------------------ATGTTCTTG-AAATTAATCATTT-----TGGA--TAGCACAAAAA--------------------------------------------------------------CGGAAAACATT-------------------------------------------------------------------------------------------------------------AATT-CGTAAA----GCTATCACA-------------------------------ASizeHit CountTotal NormTotal
No Reads
dm3
ATGGTCG-GAAACTCTTCCTTCTACC-TGTTACATACTTT-------TCAACGAATCTAGTATACTCTT-TA-CTC------T-------ACGGGTATAAAAACCTAT--T---A-----------------------------------------------------------------------------GGAAAGCGTTAACAGAGTGTTTGCGCAAAAATCT-T-------TAT--------TTCCTTGGCTTTTTATATTGATTTTCTTGT-------------------------------------------------------------------------------TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAACTCGTTCTTGTTGTTTCCTTAATTTACTTTCTTTTCA------------------CGTTTAGGT-----TCAGTGCAAATC--------------------ATTTCGATG---GC---------AAATGTCTAAATGGAACGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
......................................TT-------TCAACGAATCTAGTATACTCTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2547.7531000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304001130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTT-------TCAACGAATCTAGTATACTCTT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2544.75190000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020903220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTT-------TCAACGAATCTAGTATACTCTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2644.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000050302320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TT-------TCAACGAATCTAGTATACTCTT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2443.50140000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010410060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCAAATC--------------------ATTTCGATG---GC---------AAA...............2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCAAATC--------------------ATTTCGAT.................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---GC---------AAATGTCTAAATGGAAC.2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGATG---GC---------AAATGTCT..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000
.....................................TTT-------TCAACGAATCTAGTATACTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2481.38110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020101330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................AAAGCGTTAACAGAGTGTTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
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droSim2
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Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
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.................................................................................................TAAAAAGAAAA--T--G--------------------------------------------------------------------------------CA-------AAA----------GAGAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.20200000010010000000
...............................ACATACTTT-------TCAACGAATCTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.20400000000040000000
......................................TT-------TCAACGAATCTAGTATACCCTTTTA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.20400000000040000000
....................................................................................................................................................................................................................................TAATTAA---CGCTCCAT------------------------------------T-------------------------------------------------------TCAGGGAT-GGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.17100000000000100000
..............................................................................................................................................................................................................................................CGCTCCAT------------------------------------T-------------------------------------------------------TCAGGGAT-GGTCATAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17100000010000000000
...............................................................................................................................................................................................................................................GCTCCAT------------------------------------T-------------------------------------------------------TCAGGGAT-GGTCATAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17100000010000000000
..............................TACATACTTT-------TCAACGAATCTAGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000001200000000
.......................................................................................................................................................................................................................................TTAA---CGCTCCAT------------------------------------T-------------------------------------------------------TCAGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14100000000010000000
.................................................................................................................................................................................................................................................TCCAT------------------------------------T-------------------------------------------------------TCAGGGAT-GGTCATAATATATT-------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.14100000000100000000
...................................................................................................................................................................................................................................................CAT------------------------------------T-------------------------------------------------------TCAGGGAT-GGTCATAATATATT-------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14100000001000000000
..................................................................................................................................................................................................................................TCTAATTAA---CGCTCCAT------------------------------------T-------------------------------------------------------TCAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14100000010000000000
...................................................................................................................................................................................................................................CTAATTAA---CGCTCCAT------------------------------------T-------------------------------------------------------TCAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14100000010000000000
.......................................................TCTAGTATACCCTTTTA-CTT------TGCGAGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.13100000000100000000
........................................................................................TAACGGGTATAAAAAGAAAA--T--G--------------------------------------------------------------------------------CA-------AA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.13100000000100000000
...................................................................TTTTA-CTT------TGCGAGTAACGGGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.13100000000100000000
..........................................................................TT------TGCGAGTAACGGGTATAAAAAGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13100000000100000000
..........................................................................TT------TGCGAGTAACGGGTATAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.13100000010000000000
...................................................................TTTTA-CTT------TGCGAGTAACGGGTATAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.13100000000100000000
..............................................................................................GTATAAAAAGAAAA--T--G--------------------------------------------------------------------------------CA-------AAA----------GAGAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.13100000000010000000
......................................................................TA-CTT------TGCGAGTAACGGGTATAAAAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.13100000010000000000
.......................................................................A-CTT------TGCGAGTAACGGGTATAAAAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13100000000100000000
...............................................................................................TATAAAAAGAAAA--T--G--------------------------------------------------------------------------------CA-------AAA----------GAGAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13100000000010000000
............................................................TATACCCTTTTA-CTT------TGCGAGTAACGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.13100000010000000000
.........................................................TAGTATACCCTTTTA-CTT------TGCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.11100000010000000000
..............................................................................................................T--G--------------------------------------------------------------------------------CA-------AAA----------GAGAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16100.10100000000001000000
.......................................................................................GTAACGGGTATAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.10200000001010000000
.................................................AACGAATCTAGTATACCCTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000100000000
..................................TACTTT-------TCAACGAATCTAGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
.....................................TTT-------TCAACGAATCTAGTATACCCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000100000000
...............................ACATACTTT-------TCAACGAATCTAGTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000100000000
......................................TT-------TCAACGAATCTAGTATACCCTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000000100000
.................................ATACTTT-------TCAACGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
.........................C-TGTTACATACTTT-------TCAACGAATCTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000010000000
droSec2
ATGGTCG-GAAACGCTTCCTTCTACC-AGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTA-CTC------TACAAGTAACGGGTATAAATAACATG--T--GTT--------------------ATC--ATTTATATATGAA------------------------------------------------------------------------------------------------------------------------------GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAATTTTTTTAA----ATTTAA-------------------------ATTTTCAAACTTTG---ATTT------AC--TGTTTTCTGTT--------------------------CCGATTGTCGCGTTTTCTTTTGAACCTAACCAAG-GTAAAGATC----------------------------------------------------------------------------------------------------------------AGTT-CCCCAA----GGCATCGTGACTTTGAATGTAAA----CACTTAC---TAGASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
......................................TT-------TCAACGAATCTAGTATACCCTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.4088000
.................................ATACTTT-------TCAACGAATCTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
...............................ACATACTTT-------TCAACGAATCTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010
.....................................TTT-------TCAACGAATCTAGTATACCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
......................................TT-------TCAACGAATCTAGTATACCCTTTTA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
droYak3
ATGGTCG-GAAACGCTTCCTTCTGCC-TGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTA-CTC------TACGAGTAACGGGTATAATAAGCTT---T--GGTTTAT--A-----------------CATTTTCATTAGA-T--TTAATTTTATAAACAAATATTTCATAA------AATGAA-------ACA----------GTAATAATGT-T-------TAT--------TATGT---TATTTAATATTTGTGTAGTTGT-------------------------------------------------------------------------------TTT---------------------------------------------------------AG----------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-TTG-CAAACGTTTT----------------------------------------------------------------------------------------------------------------CAAGAT----GTTACCATA------------------------------ACSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
......................................................................TA-CTC------TACGAGTAACGGGTATAATAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.58703300010000
droEre2
ATGGTCG-GAAACGTTTCCTTCTACC-TGTTACATACTTT-------GCGACAAATCTGGTATACCCTTTTA-TTC------TACAAATAACAGGAATACAAAACTGG--T--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTGTTTTGGTGTTTCATTTTTAATTAAGGTTTTTTTTCTTAATTATATAAT---TACTGCCTACCGAAGCTAAATTTTTTTCTTATTTTA---------------------TTTTATT--------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GTTTSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
...GTCG-GAAACGTTTCCTTCTACC-TGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2010100000

Generated: 05/17/2015 at 03:45 AM