dvi_21292

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GCTAATAGTGGCCAAGCAACCAGCAGTTTATGCACCGCAATTCAATAAGTGTATGGAGGATCGCCACTTTTCTACAAAGTGGAAATGCCAGAGACAGGTGTTGCTCCCAAAAGGCGACAAACTACCAGTGAACCAGTCTACGAATAGGCCACTGTGCATGCTAGAAGTGGTTGCAAACTGTTCAGGAGGATAATTTGTAACAGACTGCACGACGAATTTGAAGAACGGGAAGGGCTATCTGAGCACCAGTT ************************************************(((((..((((..(((((((.....)))))))..)).)).........(((((((.......)))))))......(((((.....(((((....))))))))))..)))))........((((((((.(((((....))))).))))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M061 embryo	V116 male body	SRR060684 140x9_0-2h_embryos_total	SRR060661 160x9_0-2h_embryos_total	M047 female body	SRR060672 9x160_females_carcasses_total	SRR060678 9x140_testes_total	M027 male body	SRR060657 140_testes_total	SRR060687 9_0-2h_embryos_total
.....................................................................................................................................................................................................................GAATTTGTTGAAAGGGAAGGGC................	22	3	1	11.00	11	8	2	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................GAAATTGTTGAACGGGAAGGGC................	22	3	2	4.00	8	1	3	0	3	0	1	0	0	0	0
.........................................................................................................................................................................................................................TTGAAGAACGGCAAGGGCTATCTGAG........	26	1	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GAAATTGTAGAAAGGGAAGGGC................	22	3	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................AAAAGGCGACAAACTACCAGT..........................................................................................................................	21	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0
................................CACCCCAATTCAATAAGTGTA......................................................................................................................................................................................................	21	1	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................GAAATTGATGAAAGGGAAGGGC................	22	3	3	0.67	2	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GAATTTGTTGAAAGGGAAGGG.................	21	3	4	0.50	2	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................CAAACTAGCGGTGAACCAGT..................................................................................................................	20	2	2	0.50	1	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................AATTGTTGAACGGGAAGGGC................	20	3	13	0.38	5	1	2	0	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................GAAATTGTTGAACGGGAAGGG.................	21	3	8	0.25	2	0	1	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................AAATTGTTGAACGGGAAGGGC................	21	3	5	0.20	1	0	0	0	0	0	0	0	1	0	0
................................................ATGTATAGAGTATCGCCACT.......................................................................................................................................................................................	20	3	5	0.20	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................ATTTGCTGAAAGGGAAGGGC................	20	3	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TTGTTGAACGGGAAGGGC................	18	2	12	0.08	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................AATTGATGAAAGGGAAGGGC................	20	3	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GAAATTGATGAAAGGGAAGG..................	20	3	20	0.05	1	0	0	0	0	0	0	0	0	0	1
...............................................................................................................................................................................................................................AAAGGGAAGGGCTATTTG..........	18	2	20	0.05	1	0	0	0	0	1	0	0	0	0	0

CGATTATCACCGGTTCGTTGGTCGTCAAATACGTGGCGTTAAGTTATTCACATACCTCCTAGCGGTGAAAAGATGTTTCACCTTTACGGTCTCTGTCCACAACGAGGGTTTTCCGCTGTTTGATGGTCACTTGGTCAGATGCTTATCCGGTGACACGTACGATCTTCACCAACGTTTGACAAGTCCTCCTATTAAACATTGTCTGACGTGCTGCTTAAACTTCTTGCCCTTCCCGATAGACTCGTGGTCAA ************************************************(((((..((((..(((((((.....)))))))..)).)).........(((((((.......)))))))......(((((.....(((((....))))))))))..)))))........((((((((.(((((....))))).))))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	SRR060688 160_ovaries_total	SRR060676 9xArg_ovaries_total	V116 male body	SRR060679 140x9_testes_total	SRR060687 9_0-2h_embryos_total	V053 head
....................................................................................................................................................................................AAGTCCTCCTATTAAACATTGTCTGACGT..........................................	29	0	1	1.00	1	1	0	0	0	0	0	0
.................................TGGCGTTAAGTTATTCACAT......................................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................TTGCCGTTCCCGATAGACTCG.......	21	1	3	0.33	1	0	0	1	0	0	0	0
TGATTATCACTGGTTCGT.........................................................................................................................................................................................................................................	18	2	8	0.25	2	0	0	0	0	1	1	0
......................................................................................................................................................TGGAACTTACGATCTTCACC.................................................................................	20	3	6	0.17	1	0	0	0	1	0	0	0
...........................................................................................................................TGGTCACTTGGTCTGACGGT............................................................................................................	20	3	14	0.07	1	0	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droVir3	scaffold_13050:605553-605803 +	dvi_21292	GCTAATAGTGGCCAAGCAACCAGCAGTTTATGCACCGCAATTCAATAAGTGTATGGAGGATCGCCACTTTTCTACAAAGTGGAAATGCCAGAGACAGGTGTTGCTCCCAAAAGGCGACAAACTACCAGTGAACCAGTCTACGAATAGGCCACTGTGCATGCTAGAAGTGGTTG-CAAACTGTTCA----GGAGGATAATTTGTAACAGACTGCACGACGAATTTGAAGAACGGGAAGGGCTATCTGAGCACCAGTT
droMoj3	scaffold_6680:24172325-24172579 +		GCTAGCCCTCGCCTTGCACCCTAGTACGTTTGCCGAATTATACAATGAATGTTTAATTCAGGAGACGTTCCATGCAAAATGGAAAACCCAGAACCTGGTATTGCTACCCAAGGCTGGCAAACCACCAGA-GAGCCATCTTCGTATAGACCAATCTGCCTCTTAGACACAATGGGAAAGGTAGACAAACAAGAAACTGATTTGCTCTAGACTGGAGACTTCTATTGCTAGCGCCAGAGGCCTATCACCAAATCAATT
droWil2	scf2_1100000007393:147-395 -		ACTGCTAGTTTGCAAACACGCGTCGACGTTTGTGGAACTTTTCAACACATGCATGCTGCAACGGGAGTTCCCTACAAGGTGGAAGCTACAAAGGTTGGTCCTGCTTCCCAAAGGCGATAAAAT---AGATGACCCATCTGCATACAGACCCCTGTGTATGCTTGATGTGATTGGGAAACTTTTTG----AGCGCATCATTTGCAACAGACTGGAGAAGGAACTGGAGCAACGTCATGGACTATCGGACTGGCAGTT
dp5	Unknown_group_235:6621-6872 +		ATGCATCATTTGAGCCCATCCGAAAGCATTCGCCACAATGTACACCCAGTGCCTAGCGGAGCGGACAGTCCCACAAGCATGGAAACGGCAAAGGCTGGTTCTGATACCCAAGCCAGGCAAAGAGCTCAACGACCCATCGTCATACCGGCCGCTGTGCATGCTGGATACCATGGTCAAGATTTTCG----AGAGGATGGTATGTAACCGACTGGAGGCGGAACTGGCTGAGCGTCGCGGACTTTCCGACCTCCAATT
droPer2	scaffold_66:333803-334054 +		ATGCATAATTAGAGCCCATCCGGAAGCATTCGCCACAATGTACACCCAGTGCCTAGCGGAGCGGACAGTCCCACGAGCATGGAAACGGCAAAGACTGGTTCTGATACCCAAGCCAGGCAACGAGCTCAACGACCCAACGTCATACCGGCCGCTGTGCATGCTGGATACCATGGGCAAGATTTTCG----AGAGGATGGTATGTAACCGACTGGAGGCGGAACTGGCTGAGCGTCGCGGACTTTCCGACCTCCAATT
droAna3	scaffold_12911:1411660-1411908 +		GATCATCCTGGCGTTGATACCGGAGAAGATGGCCGTCATTTTCAATCAGTGTCTACTGGAGGGCACCTTTCCGGCAATTTGGAAGATGCAGAGGCTACTCCTCCTGCCAAAGCCTGGCAAGCCACCCGGGCAAGCAGCATCGTACAGACCGATGTGCCTGTTAGAC---GTGGGCAAGGTGCTAG----AAAAAATAATTGCAACGAGATTACAGGCGGCCATAAGTAGGGTCGGCGGCCTGGCAGCGGAGCAATA
droBip1	scf7180000395306:8933-9184 -		ACTGGCTCTGGCACTGCAGCCGGGAAGTTTTGCGGAGCTGTTCAACAGATGCATCCGCGAAGGCACCTTTCCCACCAGGTGGAAGGTGCAGAAGCTCCTGCTGCTACAAAAACCAGGGAAACCAAGGGAGGAGGCGTCGTCCTATAGGCCAATCTGCCTGCTGGACACAACGGGCAAGGTTTTCG----AGAGGGTGATCGCTTCGAGGCTCGAAGCCGCAATAGAGGAGGCGGGAGGGCTATCGCCAAAGCAGTA
droKik1	scf7180000300896:16096-16346 +		GCC-ATAATGAAGTCATACCCAAGCCTATTTGCACAGGTATACAACAGGTGCATTGCGGAGCGCACTTTTCCAAGAGTATGGAAGCAGCAGAGACTAGTGCTCATCCCTAAACCAGGCAAAACGAATGACGACCCGTCCTCATATCGCCCCCTGTGCATGCTCAACACACTGGGGAAGATATTTG----AGCGCATAATCTGCAACAAGTTGGAGAGAGAGATCGAAGAGCGTGGAGCTCTATCGAATCAGCAGCA
droFic1	scf7180000448497:256-507 +		GACCTTAATTGCCGCACGTCCGGATATATTCGTTGAGCTATTCAACAAATGCATTGGTGAATGCACAATTCCGCGAAGATGGAAAACACAGCGTCTGGTACTCATTCCAAAGCCGGGGAAACATCAAGAGGACCCGTCAGCATATCGTCCATTGTGTATGCTGGACACGACTGGCAAGATCCTGG----AGAGGCTGATCTGCAATCGTATAGAGAACGAGCTTGAAAGCCGGCAAGGACTCTCAAACCACCAATA
droEle1	scf7180000489729:5960-6204 -		CACAATAGTGGCAGCTTACCCGGGTATATTCACGGAAATGTACAACAAGTGTCTCATCCAACGAACCTTCCCCACAGGATGGAAGCGGCAGAGATTAGTGCTCATCCCAAAACCGGGCAAGATGAACGATGACGCATCGTCATACAGGCCCCTTTGCATGCTAGATACAATGGGTAAGATGCTCA----A-------ATATGCACCCGCCTCGAAAAGGAGCTCGACGATCTTGGAGCTTTCTCGGACCACCAGTT
droRho1	scf7180000776532:256581-256831 -		ACTAGCCATCAGCATGTACCCGAGCACCTTTGCCAGTGCATACACTAAGTGCCTGGCCCAAGC-CTGCTTCCCAGACGGTGGAAACAGCAAAAGCTGGTGCTTATTCCAAAGCCAGGAAAAGACAAGGATGAACCGTCGGCTTATAGGCCCATTTGCCTTCTAGACACGGCCGGCAAAATATTGG----AAAGTATTGTCAGTGCAAGACTCGGAGAGGCAATAGAGGCTGCCGGAGGGCTCTCAGAAAGTCAGTA
droBia1	scf7180000301625:13956-14205 -		AGCAGCCATAAAAGCAA--ACAAAACAGTATGTTGGCATGTATAATGCATGCTTAACAGAAGGTCTGTTCCCTAGTCGCTGGAAAACTCAGCGGTTGGTACTCATACCAAAGGGGGACAAGCCAGCGGAGAAGCCTTCTTCGTATAGGCCACTCTGCATGCTGGATAAGGTGTGTAAAATTTTTG----AAAGAATAATCCACTCCCGGCTAAAGGGTGCCCTTGTCGAAACCAACGGCCTCTCTGAGATGCAGTA
droTak1	scf7180000411464:12059-12310 -		CACAATGGTGGCAGCTTACCCGGGTATATTCACGGAGATATACAACAAGTGTCTCACCCAACGAACCTTCCCCACAGGATGAAAGCGGCAGAGATTGGTGCTCATCCCTAAACCCGGCAAGATAACCGACGACGCATCCTCATACAGACCCCTATGTATGCTAAATACGATGGGAAAGATATTTG----AGCGCATAATCTGCACCCACCTCGCAAAGAAGTTCGACGAACTCAGATCGTTGTCGTACCACCAGTT
droEug1	scf7180000409481:4970-5221 -		AATTGCAATTAGGGCAAATACAAAAGAGTACGTTGATATGTATAACGGTTGCCTAACGGAAGGAGTGTTCCCCAGACGCTGGAAAACACAGCGGTTGGTACTCATACCAAATGGGGACAAACCGGTGGAGGAACCTTCTTCGTACAGGCCGCTATGTATGCTGGATACGGTGGGCAAAATTGCGG----AGAGAATAATCCACTCCCGGCTGGAGGGTGCCCTTGCCGAAACCAATGGCCTCTCCGAGATGCAGTA
dm3	chr2R:1202075-1202322 +		GCATTGGCGTTCGGTA-GACCTGACATCTTCAGGACCACCTTACAGCAATGTCTTTTGGACGGAATCTTTTCAATAAGGTGGAAAAGCCAGAAAATAGTTCTGCTGCACAAATGCAAGGGATCAGCATATGCTGCAAACAGCTACCGCCCTCTATGCCTACTAAATATAGTTGGAAAACTGTCCG----AAGATATCTTGTATACTCGAATAGAGGCCG---TCGATGCTCTCAGTGACGAAGGAAGTCAGCAATA
droSim2	node_48285:95-346 +		GCTTGGAATGTACGAGCACCCGGAAGCATTCGCAGCCGTCTTCAACCAGTGTCTCACGGAAGGCTTCTTTCCAGAGCGTTGGAAGAGACAGAAGCTGGTACTGCTCCCCAAGCCCAACAAGCCGCCCGAGGACCCATCCTCATACAGACCGATATGCCTGATCGACCACATCGGCAAGGCTTTCG----AACGCTGTATCAGCCTCAGACTGCACGAGGCCATCTCCGCTGCAGGGGACCTCTCAGAAATGCAGTT
droSec2	scaffold_1168:3333-3584 +		GCTTGCTCTCTACCTCCAGCCAGACTCGTTTGCGAAGGCATTCACCAAGTGCCTGGAGGAAGGAGTTTTCCCGAGTTGCTGGAAAATCCAAAAGCTGCTTCTCCTCCCAAAACCAGGGAAACCACCCGAGGAGCCTTCATCGTTCCGGCCAATATGCCTCATTGATGGAACTGGCAAGCTCCTGG----AGAAACTGATGTGCATTCGGCTTGAGAGGACTATCGCCGACGCGGGTGACCTCTCACGGTCCCAGTT
droYak3	3L:23655588-23655839 -		GCTTGGAATGTACGAGCACCCGGAAGCATTCGCAGCCGTCTTCAACCAGTGTCTCACGGAAGGCTCCTTTCCAGAGCGCTGGAAGAGACAGAAGCTGGTACTGCTCCCCAAGCCCAACAAGCCGCCCGAGGACCAATCCTCATACAGACCGATATGCCTGATCGACCACATCGGCAAGGCTTTCG----AACGCTGTATCAGCCTCAGACTGCACGAGGCCATCTCCGCTGCAGGGGACCTCTCAGAAATGCAGTT
droEre2	scaffold_4784:24098251-24098502 +		GCTAGGCATGAACGAGTACCCGGAAGCATTCGCAAATGTTTTTAACCAGTGCCTCACAGAAGGCCTTTTCCAAAAGCGCTGGAAAAGGCAGAAGCTGGTACTGCTTCCCAAGCCAAACAAGCCTCCCGAGAGTCCATCTTCATATAGGCCGATATGCCTGATTGACCACTTGGGCAAAGCTTTCG----AGCGATGCCTTAGCAATAGACTGCACGTTGCCATCTCCGCTGCAGGGGATCTTTCGCCAATGCAGTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

GCTAATAGTGGCCAAGCAACCAGCAGTTTATGCACCGCAATTCAATAAGTGTATGGAGGATCGCCACTTTTCTACAAAGTGGAAATGCCAGAGACAGGTGTTGCTCCCAAAAGGCGACAAACTACCAGTGAACCAGTCTACGAATAGGCCACTGTGCATGCTAGAAGTGGTTG-CAAACTGTTCA----GGAGGATAATTTGTAACAGACTGCACGACGAATTTGAAGAACGGGAAGGGCTATCTGAGCACCAGTT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
............................................................................................................AAAAGGCGACAAACTACCAGT...............................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GCTAGCCCTCGCCTTGCACCCTAGTACGTTTGCCGAATTATACAATGAATGTTTAATTCAGGAGACGTTCCATGCAAAATGGAAAACCCAGAACCTGGTATTGCTACCCAAGGCTGGCAAACCACCAGA-GAGCCATCTTCGTATAGACCAATCTGCCTCTTAGACACAATGGGAAAGGTAGACAAACAAGAAACTGATTTGCTCTAGACTGGAGACTTCTATTGCTAGCGCCAGAGGCCTATCACCAAATCAATT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
........................................................................................................TACCCAAGGCTGGCAAACCACCAGA-..............................................................................................................................	25	20	0.85	17	0	0	0	0	17	0
........................................................................................................TACCCAAGGCTGGCAAACCACCAG................................................................................................................................	24	20	0.85	17	17	0	0	0	0	0
................CACCCTAGTACGTTTGCCGAATTATAC.....................................................................................................................................................................................................................	27	13	0.69	9	6	0	0	0	3	0
................CACCCTAGTACGTTTGCCGAATT.........................................................................................................................................................................................................................	23	17	0.59	10	8	0	0	0	2	0
................CACCCTAGTACGTTTGCCGAATTA........................................................................................................................................................................................................................	24	17	0.35	6	6	0	0	0	0	0
................CACCCTAGTACGTTTGCCGAATTATACA....................................................................................................................................................................................................................	28	11	0.27	3	3	0	0	0	0	0
................CACCCTAGTACGTTTGCCGAATTAT.......................................................................................................................................................................................................................	25	16	0.25	4	3	0	0	0	1	0
................CACCCTAGTACGTTTGCCGAAT..........................................................................................................................................................................................................................	22	17	0.24	4	3	0	0	0	1	0
..................................................................................................................................................................................................CTGATTTGCTCTAGACTGGAGACTT.....................................	25	5	0.20	1	1	0	0	0	0	0
.............................................TGAATGTTTAATTCAGGAGACGT............................................................................................................................................................................................	23	5	0.20	1	0	0	0	0	1	0
........................................................................................................TACCCAAGGCTGGCAAACCACCAGA-G.............................................................................................................................	26	6	0.17	1	1	0	0	0	0	0
.....................................................................................................TGCTACCCAAGGCTGGCAAACCACCAGA-..............................................................................................................................	28	20	0.15	3	3	0	0	0	0	0
..............................................................................................................................................................................................GAAACTGATTTGCTCTAGACTGGAGA........................................	26	7	0.14	1	1	0	0	0	0	0
.............................................................................................................................................................................................................TAGACTGGAGACTTCTATTGCTAGCG.........................	26	8	0.13	1	1	0	0	0	0	0
................CACCCTAGTACGTTTGCCGAA...........................................................................................................................................................................................................................	21	17	0.12	2	2	0	0	0	0	0
....................................................................................................................................................................................................................GAGACTTCTATTGCTAGCGCC.......................	21	9	0.11	1	0	0	0	0	1	0
................CACCCTAGTACGTTTGCCGAATTATACAA...................................................................................................................................................................................................................	29	11	0.09	1	1	0	0	0	0	0
................CACCCTAGTACGTTTGCCGAATTATACCC...................................................................................................................................................................................................................	29	13	0.08	1	1	0	0	0	0	0
.................ACCCTAGTACGTTTGCCGAATTATAC.....................................................................................................................................................................................................................	26	13	0.08	1	1	0	0	0	0	0
................CACCCTAGTACGTTTGCCGAATTATA......................................................................................................................................................................................................................	26	13	0.08	1	1	0	0	0	0	0
.............TTGCACCCTAGTACGTTTGCCGA............................................................................................................................................................................................................................	23	16	0.06	1	1	0	0	0	0	0
.........................................................................................................ACCCAAGGCTGGCAAACCACCAG................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
......CCTCGCCTTGCACCCTAGTAC.....................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0
.CTAGCCCTCGCCTTGCACCCTAGTACG....................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.......................................................................................................CTACCCAAGGCTGGCAAAC......................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0
......CCTCGCCTTGCACCCTAGTACG....................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.......................................................................................................CTACCCAAGGCTGGCAAACCAC...................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
..........................................................................................................CCCAAGGCTGGCAAACCACCA.................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
..........................................................................................GAACCTGGTATTGCTACCCAAGG...............................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.......CTCGCCTTGCACCCTAGTACGTT..................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0

droWil2

ACTGCTAGTTTGCAAACACGCGTCGACGTTTGTGGAACTTTTCAACACATGCATGCTGCAACGGGAGTTCCCTACAAGGTGGAAGCTACAAAGGTTGGTCCTGCTTCCCAAAGGCGATAAAAT---AGATGACCCATCTGCATACAGACCCCTGTGTATGCTTGATGTGATTGGGAAACTTTTTG----AGCGCATCATTTGCAACAGACTGGAGAAGGAACTGGAGCAACGTCATGGACTATCGGACTGGCAGTT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGAGC............................	24	20	1.75	35	1	27	1	6	0
..................................GAACTTTTCAACACATGCATGCTG......................................................................................................................................................................................................	24	20	1.50	30	0	30	0	0	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGAG.............................	23	20	1.30	26	0	26	0	0	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGA..............................	22	20	1.20	24	0	18	2	4	0
....CTAGTTTGCAAACACGCGTCGACG....................................................................................................................................................................................................................................	24	18	0.67	12	0	11	0	1	0
....CTAGTTTGCAAACACGCGTCGACGT...................................................................................................................................................................................................................................	25	18	0.61	11	0	9	1	1	0
......................................................................................................................................................................GTGATTGGGAAACTTTTTG----AGCGC..............................................................	24	20	0.55	11	0	11	0	0	0
..................................GAACTTTTCAACACATGCATGCTGC.....................................................................................................................................................................................................	25	20	0.45	9	0	9	0	0	0
......................................................................................................................................................................GTGATTGGGAAACTTTTTG----AGCGCA.............................................................	25	20	0.45	9	0	9	0	0	0
....................................................................................................................................................CCCCTGTGTATGCTTGATGTGATTG...................................................................................	25	20	0.35	7	0	6	0	1	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGAGCA...........................	25	20	0.30	6	0	6	0	0	0
.................................................................................GAAGCTACAAAGGTTGGTCCTGC........................................................................................................................................................	23	20	0.25	5	0	5	0	0	0
.......................................................................................................................................................................TGATTGGGAAACTTTTTG----AGCGCA.............................................................	24	20	0.25	5	0	5	0	0	0
....................................................................................................................................................CCCCTGTGTATGCTTGATGTGATT....................................................................................	24	20	0.20	4	0	4	0	0	0
..........................................................................................................................................................................................................CAACAGACTGGAGAAGGAACTGGA..............................	24	20	0.20	4	0	1	0	3	0
....................................................................................................................................................CCCCTGTGTATGCTTGATGTGAT.....................................................................................	23	20	0.20	4	0	4	0	0	0
........................................................................................................................................................................................................................AGGAACTGGAGCAACGTCATGGA.................	23	20	0.20	4	1	3	0	0	0
......................................................................................................................................................................GTGATTGGGAAACTTTTTG----AGCG...............................................................	23	20	0.20	4	0	4	0	0	0
..................................GAACTTTTCAACACATGCATGCTGCAACG.................................................................................................................................................................................................	29	18	0.17	3	0	3	0	0	0
.....TAGTTTGCAAACACGCGTCGACG....................................................................................................................................................................................................................................	23	18	0.17	3	0	2	1	0	0
........................................................................................................................................TCTGCATACAGACCCCTGTGTA..................................................................................................	22	12	0.17	2	0	2	0	0	0
................................................................................................................................................................CTTGATGTGATTGGGAAACTTTTT........................................................................	24	19	0.16	3	0	1	1	1	0
........................................................................................................................................................................................................TGCAACAGACTGGAGAAGGAACT.................................	23	20	0.15	3	0	3	0	0	0
..........................................................................................................................................................................TTGGGAAACTTTTTG----AGCGCATCATT........................................................	26	20	0.15	3	0	0	0	2	1
....CTAGTTTGCAAACACGCGTCGAC.....................................................................................................................................................................................................................................	23	20	0.15	3	0	3	0	0	0
...........................................AACACATGCATGCTGCAACGGGAG.............................................................................................................................................................................................	24	20	0.15	3	0	3	0	0	0
..............................................................................................................................................TACAGACCCCTGTGTATGCTTGATGT........................................................................................	26	20	0.15	3	0	0	0	3	0
...........................................................................................................................................................................TGGGAAACTTTTTG----AGCGCATCA..........................................................	23	20	0.15	3	0	3	0	0	0
..................................GAACTTTTCAACACATGCATGCTGCAA...................................................................................................................................................................................................	27	18	0.11	2	0	2	0	0	0
....CTAGTTTGCAAACACGCGTCGACGTT..................................................................................................................................................................................................................................	26	18	0.11	2	0	2	0	0	0
.....................................CTTTTCAACACATGCATGCTGCAACG.................................................................................................................................................................................................	26	19	0.11	2	0	2	0	0	0
...........................................................................................................................................................GTATGCTTGATGTGATTGGGAAACT............................................................................	25	19	0.11	2	0	1	0	1	0
......................................................................................................................................................................GTGATTGGGAAACTTTTTG----AGCGCAT............................................................	26	19	0.11	2	0	2	0	0	0
................CACGCGTCGACGTTTGTGGAACTT........................................................................................................................................................................................................................	24	19	0.11	2	0	2	0	0	0
.................................................................................GAAGCTACAAAGGTTGGTCCTG.........................................................................................................................................................	22	20	0.10	2	1	1	0	0	0
...................................................................................................................................................................................................TCATTTGCAACAGACTGGAGAAGGA....................................	25	20	0.10	2	0	1	0	1	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAAC..................................	18	20	0.10	2	0	2	0	0	0
...........................................................................................................................................................................TGGGAAACTTTTTG----AGCGCATCATT........................................................	25	20	0.10	2	0	0	0	2	0
....................................................................................................................................................CCCCTGTGTATGCTTGATGTGATTGG..................................................................................	26	20	0.10	2	0	2	0	0	0
................................................................................................................................................................................AACTTTTTG----AGCGCATCATTTGCA....................................................	24	20	0.10	2	0	2	0	0	0
......................................................................................TACAAAGGTTGGTCCTGCTTCCC...................................................................................................................................................	23	20	0.10	2	0	0	0	2	0
.............................................................................................................................................................................................................CAGACTGGAGAAGGAACTGGAG.............................	22	20	0.10	2	0	2	0	0	0
....CTAGTTTGCAAACACGCGTCGA......................................................................................................................................................................................................................................	22	20	0.10	2	0	2	0	0	0
..................................GAACTTTTCAACACATGCATGC........................................................................................................................................................................................................	22	20	0.10	2	0	2	0	0	0
....................................................................................................................................................CCCCTGTGTATGCTTGATGTGATTGGG.................................................................................	27	20	0.10	2	0	2	0	0	0
....................................................................................................................................................CCCCTGTGTATGCTTGATGTGA......................................................................................	22	20	0.10	2	0	1	0	1	0
........................................................................................................................................................................................................................AGGAACTGGAGCAACGTCATGGAC................	24	20	0.10	2	0	1	0	1	0
........................................................................................................................................................................................................................AGGAACTGGAGCAACGTCATGG..................	22	20	0.10	2	0	2	0	0	0
..................................................................................AAGCTACAAAGGTTGGTCCTGCT.......................................................................................................................................................	23	20	0.10	2	0	2	0	0	0
..........................................................................................................................................................................................................CAACAGACTGGAGAAGGAACT.................................	21	20	0.10	2	0	0	0	2	0
.......................................................................................................................................ATCTGCATACAGACCCCTGTGTATC................................................................................................	25	12	0.08	1	0	1	0	0	0
..............................................................................................................................AGATGACCCATCTGCATACAGACCCC........................................................................................................	26	12	0.08	1	0	1	0	0	0
......................................................................................................................................CATCTGCATACAGACCCCTGTG....................................................................................................	22	12	0.08	1	0	1	0	0	0
......................................................................................................................................CATCTGCATACAGACCCCTGTGTAT.................................................................................................	25	12	0.08	1	0	1	0	0	0
.......................................................................................................................................ATCTGCATACAGACCCCTGTGTAT.................................................................................................	24	12	0.08	1	0	1	0	0	0
....................................................................................................................................CCCATCTGCATACAGACCCCTGTGTAT.................................................................................................	27	12	0.08	1	0	1	0	0	0
................................................................................................................................ATGACCCATCTGCATACAGACCCC........................................................................................................	24	12	0.08	1	0	1	0	0	0
......................................................................................................................................CATCTGCATACAGACCCCTGTGT...................................................................................................	23	12	0.08	1	0	1	0	0	0
....................................................................................................................ATAAAAT---AGATGACCCATCTGCATACA..............................................................................................................	27	13	0.08	1	0	1	0	0	0
.....................................................................................................................TAAAAT---AGATGACCCATCTGC...................................................................................................................	21	13	0.08	1	0	1	0	0	0
................................................................................................................................ATGACCCATCTGCATACAGA............................................................................................................	20	14	0.07	1	0	1	0	0	0
.....TAGTTTGCAAACACGCGTCGACGTTTG................................................................................................................................................................................................................................	27	17	0.06	1	0	0	0	1	0
....CTAGTTTGCAAACACGCGTCGACGTTT.................................................................................................................................................................................................................................	27	17	0.06	1	0	1	0	0	0
.....TAGTTTGCAAACACGCGTCGACGT...................................................................................................................................................................................................................................	24	18	0.06	1	0	1	0	0	0
......AGTTTGCAAACACGCGTCGACGT...................................................................................................................................................................................................................................	23	18	0.06	1	0	1	0	0	0
..TGCTAGTTTGCAAACACGCGTCGACGT...................................................................................................................................................................................................................................	27	18	0.06	1	0	1	0	0	0
..................................GAACTTTTCAACACATGCATGCTGCAAC..................................................................................................................................................................................................	28	18	0.06	1	0	1	0	0	0
........TTTGCAAACACGCGTCGACGTTTGTG..............................................................................................................................................................................................................................	26	18	0.06	1	0	1	0	0	0
..TGCTAGTTTGCAAACACGCGTCGACG....................................................................................................................................................................................................................................	26	18	0.06	1	0	1	0	0	0
....CTAGTTTGCAAACACGCGTCGACGTG..................................................................................................................................................................................................................................	26	18	0.06	1	0	1	0	0	0
.........................................TCAACACATGCATGCTGCAACGGGAAA............................................................................................................................................................................................	27	19	0.05	1	0	1	0	0	0
..............................................................................................................................................................TGCTTGATGTGATTGGGAAACTT...........................................................................	23	19	0.05	1	0	1	0	0	0
...............................................................................................................................................................GCTTGATGTGATTGGGAAACTTTT.........................................................................	24	19	0.05	1	0	1	0	0	0
.........................................TCAACACATGCATGCTGCAACGGGAG.............................................................................................................................................................................................	26	19	0.05	1	0	0	0	1	0
................................................................................................................................................................CTTGATGTGATTGGGAAACTTTTTG----AG.................................................................	27	19	0.05	1	0	0	0	1	0
..............................................................................................................................................................TGCTTGATGTGATTGGGAAACTTTT.........................................................................	25	19	0.05	1	0	0	0	1	0
........................................TTCAACACATGCATGCTGCAACGGGAG.............................................................................................................................................................................................	27	19	0.05	1	0	1	0	0	0
.....................................CTTTTCAACACATGCATGCTGCAACGG................................................................................................................................................................................................	27	19	0.05	1	0	1	0	0	0
................................................................................................................................................................CTTGATGTGATTGGGAAACTTTTTG----...................................................................	25	19	0.05	1	0	1	0	0	0
..............................................................................................................................................................TGCTTGATGTGATTGGGAAACTTTTT........................................................................	26	19	0.05	1	0	0	0	1	0
...................................AACTTTTCAACACATGCATGCTGCAACGG................................................................................................................................................................................................	29	19	0.05	1	0	1	0	0	0
..........................................CAACACATGCATGCTGCAACGGG...............................................................................................................................................................................................	23	19	0.05	1	0	1	0	0	0
.........................................TCAACACATGCATGCTGCAACGG................................................................................................................................................................................................	23	19	0.05	1	0	1	0	0	0
................................................................................................................................................................CTTGATGTGATTGGGAAACTTT..........................................................................	22	19	0.05	1	0	0	0	1	0
........................................................................................................................................................................................................................AGGAACTGGAGCAACGTCATGGACT...............	25	20	0.05	1	0	1	0	0	0
..........................................................................................................................................................................TTGGGAAACTTTTTG----AGCGC..............................................................	20	20	0.05	1	0	0	1	0	0
...............................................................................TGGAAGCTACAAAGGTTGGTCCTGCT.......................................................................................................................................................	26	20	0.05	1	0	0	0	1	0
.......................................................................................................................................................................TGATTGGGAAACTTTTTG----AGCGCATC...........................................................	26	20	0.05	1	0	0	0	1	0
..................................................GCATGCTGCAACGGGAGTTCCC........................................................................................................................................................................................	22	20	0.05	1	0	0	0	1	0
.....................................................................................................................................................................................................ATTTGCAACAGACTGGAGAAGGAAC..................................	25	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................GGAAACTTTTTG----AGCGCATCATTTG......................................................	25	20	0.05	1	0	1	0	0	0
...................................................................................................................................................................................................................GGAGAAGGAACTGGAGCAACGTC......................	23	20	0.05	1	0	1	0	0	0
..............................................................................................................................................TACAGACCCCTGTGTATGCTTGAT..........................................................................................	24	20	0.05	1	0	0	0	1	0
...........................................................................................................................................................................................................................AACTGGAGCAACGTCATGGAC................	21	20	0.05	1	0	1	0	0	0
....................................................................................................................................................................................................CATTTGCAACAGACTGGAGAAGGAAC..................................	26	20	0.05	1	0	1	0	0	0
........................................................................................................................................................TGTGTATGCTTGATGTGATTGGGAAT..............................................................................	26	20	0.05	1	0	0	0	1	0
........................................................................................................................................................................................................TGCAACAGACTGGAGAAGGAACTG................................	24	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................................TGGAGAAGGAACTGGAGCAACGTCA.....................	25	20	0.05	1	0	1	0	0	0
.....................................................................................................................................................................................TTTG----AGCGCATCATTTGCAACAG................................................	23	20	0.05	1	0	1	0	0	0
.....................................................................................................................................................................................................ATTTGCAACAGACTGGAGAAGGA....................................	23	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGAGA............................	24	20	0.05	1	0	1	0	0	0
....................................................................................................................................................................................TTTTG----AGCGCATCATTTGCA....................................................	20	20	0.05	1	0	1	0	0	0
................................................................................GGAAGCTACAAAGGTTGGTCCTG.........................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
..............................................................................................................................................TACAGACCCCTGTGTATGCTTGATGTG.......................................................................................	27	20	0.05	1	0	0	0	1	0
..................................................................................................................................................................................................ATCATTTGCAACAGACTGGAGAAGGA....................................	26	20	0.05	1	0	1	0	0	0
..............................................ACATGCATGCTGCAACGGGAGTTC..........................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
................CACGCGTCGACGTTTGTGGAACT.........................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................CAGACTGGAGAAGGAACTGGA..............................	21	20	0.05	1	0	1	0	0	0
................................................................................................................................................................................................................ACTGGAGAAGGAACTGGAGC............................	20	20	0.05	1	0	0	0	1	0
................................TGGAACTTTTCAACACATGCAT..........................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
.............................................................................................................................................ATACAGACCCCTGTGTATGCTTGATG.........................................................................................	26	20	0.05	1	0	1	0	0	0
........................GACGTTTGTGGAACTTTTC.....................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	1	0
.................................................................................................................................................................TTGATGTGATTGGGAAACTTTTT........................................................................	23	20	0.05	1	0	1	0	0	0
.....................................CTTTTCAACACATGCATGCTGCA....................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
..........................................................................................................................................................................TTGGGAAACTTTTTG----AGCGCATCAT.........................................................	25	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................................TGCAACAGACTGGAGAAGG.....................................	19	20	0.05	1	0	0	0	1	0
.......................................................................................................................................................................TGATTGGGAAACTTTTTG----AGCGCATCAT.........................................................	28	20	0.05	1	0	1	0	0	0
...........................................AACACATGCATGCTGCAACGG................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
...................................................CATGCTGCAACGGGAGTTCC.........................................................................................................................................................................................	20	20	0.05	1	0	0	0	1	0
..........TGCAAACACGCGTCGACGTTTGT...............................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0
....................................................................................................................................................CCCCTGTGTATGCTTGATGTG.......................................................................................	21	20	0.05	1	0	1	0	0	0
........................................................................................................................................................TGTGTATGCTTGATGTGATTGGGAA...............................................................................	25	20	0.05	1	0	0	0	1	0
..............................................................................................................................................................................................................AGACTGGAGAAGGAACTGGAGCAA..........................	24	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................AAACTTTTTG----AGCGCATCATTTGCAT...................................................	26	20	0.05	1	0	1	0	0	0
.............................................................................................................................................ATACAGACCCCTGTGTATGCTTG............................................................................................	23	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACT.................................	19	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................GTGATTGGGAAACTTTTTG----AGCGCAA............................................................	26	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................G----AGCGCATCATTTGCAACAGACTGGAG.........................................	27	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................G----AGCGCATCATTTGCAACAGACTGG...........................................	25	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................TTTGCAACAGACTGGAGAAGGAACT.................................	25	20	0.05	1	0	1	0	0	0
................................TGGAACTTTTCAACACATGCATGCTGC.....................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
...............................................CATGCATGCTGCAACGGGAGT............................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0
..........................................................................................................................................................................TTGGGAAACTTTTTG----AGCGCATCA..........................................................	24	20	0.05	1	0	1	0	0	0
..................................GAACTTTTCAACACATGCATG.........................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
...........................................AACACATGCATGCTGCAACGGGAC.............................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGAGCAAC.........................	27	20	0.05	1	0	1	0	0	0
....................................................................................................................................................................................................................GAGAAGGAACTGGAGCAACGTCAT....................	24	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................ATCATTTGCAACAGACTGGAGAAGGAAT..................................	28	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................GTGATTGGGAAACTTTTTG----AG.................................................................	21	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................GCAACAGACTGGAGAAGGAACTGGAGC............................	27	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................................................................AGACTGGAGAAGGAACTGGAGC............................	22	20	0.05	1	0	0	0	1	0
......................TCGACGTTTGTGGAACTTTTCAAC..................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGAGCAACG........................	28	20	0.05	1	0	1	0	0	0
...........................................AACACATGCATGCTGCAACGGGAGT............................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
...................................AACTTTTCAACACATGCATGCTG......................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................GGAACTGGAGCAACGTCATGGA.................	22	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................ATCATTTGCAACAGACTGGAGAAGG.....................................	25	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................TGATGTGATTGGGAAACTTTTTG----AGC................................................................	26	20	0.05	1	0	0	0	1	0
.......................................................................................ACAAAGGTTGGTCCTGCTTCCCAAAG...............................................................................................................................................	26	20	0.05	1	0	1	0	0	0
...........GCAAACACGCGTCGACGTTTGTG..............................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................GGGAAACTTTTTG----AGCGCATCATT........................................................	24	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................GCAACAGACTGGAGAAGGAACTG................................	23	20	0.05	1	0	1	0	0	0
...............................................................................................TGGTCCTGCTTCCCAAAGG..............................................................................................................................................	19	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................CAGACTGGAGAAGGAACTGG...............................	20	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................ACAGACTGGAGAAGGAACTGGATT............................	24	20	0.05	1	1	0	0	0	0
......................................................................................TACAAAGGTTGGTCCTGCTTCCCA..................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
..........TGCAAACACGCGTCGACGTTTG................................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0
.......................................................................................................................................................................TGATTGGGAAACTTTTTG----AGCG...............................................................	22	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................ATCATTTGCAACAGACTGGAGAAG......................................	24	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................GATTGGGAAACTTTTTG----AGCGCA.............................................................	23	20	0.05	1	0	1	0	0	0
..........TGCAAACACGCGTCGACGTTTGTGG.............................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
..........................................................................................................................................................................................................CAACAGACTGGAGAAGGAACTGG...............................	23	20	0.05	1	0	1	0	0	0

dp5

ATGCATCATTTGAGCCCATCCGAAAGCATTCGCCACAATGTACACCCAGTGCCTAGCGGAGCGGACAGTCCCACAAGCATGGAAACGGCAAAGGCTGGTTCTGATACCCAAGCCAGGCAAAGAGCTCAACGACCCATCGTCATACCGGCCGCTGTGCATGCTGGATACCATGGTCAAGATTTTCG----AGAGGATGGTATGTAACCGACTGGAGGCGGAACTGGCTGAGCGTCGCGGACTTTCCGACCTCCAATT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTGG...........................................	23	2	7.50	15	0	13	0	0	0	0	0	2	0	0
................................................................................................GGTTCTGATACCCAAGCCAGGCA.........................................................................................................................................	23	3	7.00	21	0	21	0	0	0	0	0	0	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGT.....................................................................................................	23	6	5.83	35	0	33	0	0	0	0	0	2	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTG....................................................................................................	24	6	4.00	24	0	24	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCGACTGGAGGCGGAACTGGC..............................	22	4	4.00	16	0	9	0	0	0	0	0	6	1	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTGGAGG........................................	26	2	3.50	7	0	5	0	0	0	0	0	2	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTG......................................................................................................	22	6	3.17	19	0	19	0	0	0	0	0	0	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTGC...................................................................................................	25	6	2.83	17	0	17	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCGACTGGAGGCGGAACTGG...............................	21	4	2.75	11	0	8	0	0	1	0	0	2	0	0
................................................................................................GGTTCTGATACCCAAGCCAGG...........................................................................................................................................	21	3	2.67	8	0	8	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTG............................................	22	2	2.50	5	0	4	0	0	0	0	0	1	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTGGA..........................................	24	2	2.50	5	0	4	0	0	0	0	0	1	0	0
................................................................................................GGTTCTGATACCCAAGCCAGGC..........................................................................................................................................	22	3	2.33	7	0	7	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................TGTAACCGACTGGAGGCGGAACTGGC..............................	26	2	2.00	4	0	1	0	0	0	0	0	3	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTGCA..................................................................................................	26	6	2.00	12	0	12	0	0	0	0	0	0	0	0
...................................................................................................TCTGATACCCAAGCCAGGCAAAGAGC...................................................................................................................................	26	3	1.67	5	0	1	1	0	0	0	0	3	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTGCATG................................................................................................	28	6	1.50	9	0	8	0	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................TGAGCGTCGCGGACTTTCCGACC.......	23	3	1.33	4	0	3	0	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGACC.......	27	3	1.33	4	0	3	0	0	0	0	1	0	0	0
......................................................................................................................AAAGAGCTCAACGACCCATCGTC...................................................................................................................	23	5	1.20	6	0	4	0	0	0	0	0	2	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTGCATGC...............................................................................................	29	6	1.17	7	0	6	0	0	0	0	0	1	0	0
..................TCCGAAAGCATTCGCCACAATGTACAC...................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTGGAG.........................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................CGGACAGTCCCACAAGCATGGAAACGG........................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.................................................................................................GTTCTGATACCCAAGCCAGGCA.........................................................................................................................................	22	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................TGATACCCAAGCCAGGCAAAGAGCTC.................................................................................................................................	26	3	1.00	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGCTGGATACCATGGTCAAGATTTT.........................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0
................................................................................................GGTTCTGATACCCAAGCCAGGCAAA.......................................................................................................................................	25	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................................................TGGATACCATGGTCAAGATTTTCG----AGA................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGAC........	26	3	1.00	3	0	1	0	0	0	0	0	2	0	0
......................AAAGCATTCGCCACAATGTA......................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................TGCATGCTGGATACCATGGTCAAG..............................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................TCGCCACAATGTACACCCAGTGCC...........................................................................................................................................................................................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................CGGACAGTCCCACAAGCATGGAAACGGC.......................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGC........................................................................................................	20	6	0.83	5	0	5	0	0	0	0	0	0	0	0
......................................TGTACACCCAGTGCCTAGCGGAG...................................................................................................................................................................................................	23	5	0.80	4	0	4	0	0	0	0	0	0	0	0
......................................TGTACACCCAGTGCCTAGCGGAGC..................................................................................................................................................................................................	24	5	0.80	4	0	4	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCGACTGGAGGCGGAACTG................................	20	4	0.75	3	0	3	0	0	0	0	0	0	0	0
...........................................................................AGCATGGAAACGGCAAAGGCT................................................................................................................................................................	21	3	0.67	2	0	0	0	1	0	0	0	1	0	0
.....................................................................................................................................CCATCGTCATACCGGCCGCTGT.....................................................................................................	22	6	0.67	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TGAGCGTCGCGGACTTTCCGAC........	22	3	0.67	2	0	1	0	0	0	0	0	1	0	0
..............................................................................................CTGGTTCTGATACCCAAGCCAGGC..........................................................................................................................................	24	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................GTTCTGATACCCAAGCCAGG...........................................................................................................................................	20	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................GTTCTGATACCCAAGCCAGGC..........................................................................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................AAAGAGCTCAACGACCCATCGTCA..................................................................................................................	24	5	0.60	3	0	1	0	0	0	0	0	2	0	0
.............................................................................CATGGAAACGGCAAAGGCTGGTTT...........................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCGACTGGAGGCGGAACTGGCT.............................	23	4	0.50	2	0	1	0	0	0	0	0	1	0	0
...............................................................................................................................................................................................AGGATGGTATGTAACCGACTGG...........................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................CATTCGCCACAATGTACACCC.................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................AGCATTCGCCACAATGTACACCCAGTG.............................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................TAACCGACTGGAGGCGGAACTGGC..............................	24	2	0.50	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCT.......................................................................................................	21	6	0.50	3	0	3	0	0	0	0	0	0	0	0
..............................CGCCACAATGTACACCCAGTGCCTAGC.......................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................CCACAATGTACACCCAGTGCCTA.........................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCGACTGGAGGCGGAACTGGCTG............................	24	4	0.50	2	0	2	0	0	0	0	0	0	0	0
............................TTCGCCACAATGTACACCCAGTGCCT..........................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................CCACAATGTACACCCAGTGCCTAG........................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACT.............................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................TGGTATGTAACCGACTGGAGGCG......................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................TGTAACCGACTGGAGGCGGAACTGG...............................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................TGTACACCCAGTGCCTAGCGG.....................................................................................................................................................................................................	21	5	0.40	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................AAAGAGCTCAACGACCCATCGT....................................................................................................................	22	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................TCAACGACCCATCGTCATACCGGC...........................................................................................................	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................TCAACGACCCATCGTCATACCGGCC..........................................................................................................	25	5	0.40	2	0	2	0	0	0	0	0	0	0	0
...................................CAATGTACACCCAGTGCCTAGCGGA....................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................ATCGTCATACCGGCCGCTGTG....................................................................................................	21	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTC............	22	3	0.33	1	0	0	0	0	0	0	0	1	0	0
................................................................................................GGTTCTGATACCCAAGCCAGGCAAAG......................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................TGGTTCTGATACCCAAGCCAGG...........................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................CAATGTACACCCAGTGCCTAGCGGAG...................................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................................................CAAAGGCTGGTTCTGATACCCAAGC...............................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................CAATGTACACCCAGTGCCTAGCGA.....................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTA............	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CCATCGTCATACCGGCCGCTGTGC...................................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGCTGAGCGTCGCGGACTTTCCGACA.......	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................CAATGTACACCCAGTGCCTAG........................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGA.........	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CATCGTCATACCGGCCGCTGTGCATG................................................................................................	26	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..................................ACAATGTACACCCAGTGCCTA.........................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................GGTTCTGATACCCAAGCCAG............................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................GAGCGTCGCGGACTTTCCGACC.......	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TTCTGATACCCAAGCCAGGCAAAGAGC...................................................................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................GGTTCTGATACCCAAGCCAGGCAA........................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................CAATGTACACCCAGTGCCTAGCG......................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................CAATGTACACCCAGTGCCTAGCGG.....................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGACA.......	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................AATGTACACCCAGTGCCTAGCGGA....................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................ACAATGTACACCCAGTGCCTAGCGG.....................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................GGTTCTGATACCCAAGCCAGGCAAAGA.....................................................................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGACCT......	28	3	0.33	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................TGGTTCTGATACCCAAGCCAGGCAAA.......................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CCATCGTCATACCGGCCGCTG......................................................................................................	21	6	0.33	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................ACTGGCTGAGCGTCGCGGACTTTCC...........	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................TGGTTCTGATACCCAAGCCAGGCAA........................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................TACCCAAGCCAGGCAAAGAGCTCAAC..............................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................CTGATACCCAAGCCAGGCA.........................................................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................AACTGGCTGAGCGTCGCGGACTTT.............	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................CTGATACCCAAGCCAGGCAAAGAGC...................................................................................................................................	25	3	0.33	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CGACTGGAGGCGGAACTGGCT.............................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................AACCGACTGGAGGCGGAACTGG...............................	22	4	0.25	1	0	0	0	0	0	0	0	1	0	0
.............................................................................................................................................................................................................CCGACTGGAGGCGGAACTGGC..............................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................GGCGGAACTGGCTGAGCGTCGCGGAC................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCGACTGGAGGCGGAACTGGCTGA...........................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................AACCGACTGGAGGCGGAACTGGC..............................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................CCGACTGGAGGCGGAACTGGCTG............................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACCGACTGGAGGCGGAACT.................................	19	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................AACGACCCATCGTCATACCGGCCGCTG......................................................................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................AAAGAGCTCAACGACCCATCG.....................................................................................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.................................................TGCCTAGCGGAGCGGACAGTCCCAC......................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................CTGGCTGAGCGTCGCGGAC................	19	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................AGAGCTCAACGACCCATCGTCATACC..............................................................................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.......................................GTACACCCAGTGCCTAGCGGAGCGGA...............................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................TGTACACCCAGTGCCTAGCGGAGCGG................................................................................................................................................................................................	26	5	0.20	1	0	0	0	0	0	0	0	1	0	0
.......................................GTACACCCAGTGCCTAGCGGAT...................................................................................................................................................................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................TGTACACCCAGTGCCTAGCGGAGT..................................................................................................................................................................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................CGGCCGCTGTGCATGCTGGATACC.......................................................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CCATCGTCATACCGGCCGCTGTGCATGC...............................................................................................	28	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................TCATACCGGCCGCTGTGCATGCT..............................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................TACACCCAGTGCCTAGCGGAGC..................................................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTAA...................................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	1	0	0
.........................................ACACCCAGTGCCTAGCGGAGC..................................................................................................................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CCCATCGTCATACCGGCCG.........................................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................ACACCCAGTGCCTAGCGGAGCG.................................................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................CCCAGTGCCTAGCGGAGCGT................................................................................................................................................................................................	20	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CCATCGTCATACCGGCCGCTGTG....................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................ACCCATCGTCATACCGGCCGCTGT.....................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................ACCCATCGTCATACCGGCCGCTG......................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTGT...................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................GTCATACCGGCCGCTGTGCATGC...............................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................CGTCATACCGGCCGCTGTGCATGC...............................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................ACACCCAGTGCCTAGCGGAGCGG................................................................................................................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CCCATCGTCATACCGGCCGCTGTGCAT.................................................................................................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CCATCGTCATACCGGCCGCTGTGCA..................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CATCGTCATACCGGCCGCTGTGC...................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................CGTCATACCGGCCGCTGTGCATG................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................CGTCATACCGGCCGCTGTGCA..................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................TCATACCGGCCGCTGTGCATG................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................CACCCAGTGCCTAGCGGAGCGGA...............................................................................................................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.............................................CCAGTGCCTAGCGGAGCGGACA.............................................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0

droPer2

ATGCATAATTAGAGCCCATCCGGAAGCATTCGCCACAATGTACACCCAGTGCCTAGCGGAGCGGACAGTCCCACGAGCATGGAAACGGCAAAGACTGGTTCTGATACCCAAGCCAGGCAACGAGCTCAACGACCCAACGTCATACCGGCCGCTGTGCATGCTGGATACCATGGGCAAGATTTTCG----AGAGGATGGTATGTAACCGACTGGAGGCGGAACTGGCTGAGCGTCGCGGACTTTCCGACCTCCAATT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTGG...........................................	23	11	0.73	8	0	8	0	0	0	0
.........................................................................CGAGCATGGAAACGGCAAAGACTGGA.............................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0
..................................ACAATGTACACCCAGTGCCTAGCGG.....................................................................................................................................................................................................	25	8	0.50	4	0	4	0	0	0	0
.........................................................................CGAGCATGGAAACGGCAAAGACTGG..............................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGACC.......	27	13	0.46	6	0	6	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGAC........	26	13	0.38	5	4	1	0	0	0	0
..................................ACAATGTACACCCAGTGCCTAGCGGAG...................................................................................................................................................................................................	27	8	0.25	2	0	2	0	0	0	0
..................................ACAATGTACACCCAGTGCCTAG........................................................................................................................................................................................................	22	8	0.25	2	0	2	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTCCGA.........	25	13	0.23	3	2	1	0	0	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTGGAGG........................................	26	11	0.18	2	0	2	0	0	0	0
..................................................................................................................................................................................................................................TGAGCGTCGCGGACTTTCCGACC.......	23	13	0.15	2	0	2	0	0	0	0
..................................ACAATGTACACCCAGTGCCTAGCGGAGC..................................................................................................................................................................................................	28	8	0.13	1	0	1	0	0	0	0
.......................................GTACACCCAGTGCCTAGCGG.....................................................................................................................................................................................................	20	8	0.13	1	0	1	0	0	0	0
......................................TGTACACCCAGTGCCTAGC.......................................................................................................................................................................................................	19	8	0.13	1	0	1	0	0	0	0
....................................AATGTACACCCAGTGCCTAGCGG.....................................................................................................................................................................................................	23	8	0.13	1	0	1	0	0	0	0
..................................ACAATGTACACCCAGTGCCTAGC.......................................................................................................................................................................................................	23	8	0.13	1	0	1	0	0	0	0
..................................ACAATGTACACCCAGTGCCTAGCG......................................................................................................................................................................................................	24	8	0.13	1	0	1	0	0	0	0
.TGCATAATTAGAGCCCATCCG..........................................................................................................................................................................................................................................	21	9	0.11	1	0	1	0	0	0	0
...CATAATTAGAGCCCATCCGGAAGCA....................................................................................................................................................................................................................................	25	9	0.11	1	0	1	0	0	0	0
..GCATAATTAGAGCCCATCCG..........................................................................................................................................................................................................................................	20	9	0.11	1	0	1	0	0	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACT.............................................	21	11	0.09	1	0	1	0	0	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTGGA..........................................	24	11	0.09	1	0	1	0	0	0	0
...............................................................................................................................................................................................AGGATGGTATGTAACCGACTGG...........................................	22	11	0.09	1	0	1	0	0	0	0
..............................................................................................................................................................................................GAGGATGGTATGTAACCGACTG............................................	22	11	0.09	1	0	1	0	0	0	0
...............................................................................................................................................................................................AGGATGGTATGTAACCGACTGGA..........................................	23	11	0.09	1	0	1	0	0	0	0
...........................................................................................................................................................................................................AACCGACTGGAGGCGGAACTGGC..............................	23	12	0.08	1	0	1	0	0	0	0
........................................................................................................................................................................................................................CGGAACTGGCTGAGCGTCGCGGACTT..............	26	12	0.08	1	0	1	0	0	0	0
................................................................................................................................................................CTGGATACCATGGGCAAGATTTTC........................................................................	24	13	0.08	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................TGGCTGAGCGTCGCGGACTTTC............	22	13	0.08	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................GGCTGAGCGTCGCGGACTTTCC...........	22	13	0.08	1	0	1	0	0	0	0

droAna3

GATCATCCTGGCGTTGATACCGGAGAAGATGGCCGTCATTTTCAATCAGTGTCTACTGGAGGGCACCTTTCCGGCAATTTGGAAGATGCAGAGGCTACTCCTCCTGCCAAAGCCTGGCAAGCCACCCGGGCAAGCAGCATCGTACAGACCGATGTGCCTGTTAGAC---GTGGGCAAGGTGCTAG----AAAAAATAATTGCAACGAGATTACAGGCGGCCATAAGTAGGGTCGGCGGCCTGGCAGCGGAGCAATA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..................................................................................................................TGGCAAGCCACCCGGGCAAGCAGCATC...................................................................................................................	27	3	4.67	14	0	14	0	0	0	0
..................................................................................................................TGGCAAGCCACCCGGGCAAGCAGC......................................................................................................................	24	3	1.33	4	0	4	0	0	0	0
....................................................................................................................................................................................GCTAG----AAAAAATAATTGCAACGAGAT..............................................	26	1	1.00	1	0	1	0	0	0	0
.............................................................................................................AAGCCTGGCAAGCCACCCGGGC.............................................................................................................................	22	3	0.67	2	0	2	0	0	0	0
..................................................................................................................TGGCAAGCCACCCGGGCAAGCAGCA.....................................................................................................................	25	3	0.67	2	0	2	0	0	0	0
..................................................................................................................................................................................................................TACAGGCGGCCATAAGTAGGGTCGGC....................	26	2	0.50	1	0	1	0	0	0	0
..................................................................................................................................................................................................................TACAGGCGGCCATAAGTAGGGT........................	22	2	0.50	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................CCATAAGTAGGGTCGGCGGCCT...............	22	2	0.50	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................GCCATAAGTAGGGTCGGCGG..................	20	2	0.50	1	1	0	0	0	0	0
............................................................................ATTTGGAAGATGCAGAGGCTACTC............................................................................................................................................................	24	18	0.39	7	4	3	0	0	0	0
....................................................................................................................GCAAGCCACCCGGGCAAGCAGC......................................................................................................................	22	3	0.33	1	0	1	0	0	0	0
...................................................................................................................GGCAAGCCACCCGGGCAAGCAGCATC...................................................................................................................	26	3	0.33	1	0	1	0	0	0	0
............................................................................ATTTGGAAGATGCAGAGGCTACT.............................................................................................................................................................	23	18	0.33	6	5	1	0	0	0	0
..................................................................................................................TGGCAAGCCACCCGGGCAAGCAGCAC....................................................................................................................	26	3	0.33	1	0	1	0	0	0	0
....................................................................................................................GCAAGCCACCCGGGCAAGCAGCATC...................................................................................................................	25	3	0.33	1	0	1	0	0	0	0
..................................................................................................................TGGCAAGCCACCCGGGCAAGCAGCAT....................................................................................................................	26	3	0.33	1	0	1	0	0	0	0
...................................................................................................................GGCAAGCCACCCGGGCAAGCAGC......................................................................................................................	23	3	0.33	1	0	1	0	0	0	0
............................................................................ATTTGGAAGATGCAGAGGCTAC..............................................................................................................................................................	22	18	0.28	5	3	1	1	0	0	0
..................................................................................................................TGGCAAGCCACCCGGGCAAGC.........................................................................................................................	21	4	0.25	1	0	1	0	0	0	0
.............................................................................................GCTACTCCTCCTGCCAAAGCCTGGC..........................................................................................................................................	25	4	0.25	1	0	1	0	0	0	0
............................................................................................................AAAGCCTGGCAAGCCACCCGGGT.............................................................................................................................	23	4	0.25	1	1	0	0	0	0	0
.......CTGGCGTTGATACCGGAGAAGATGG................................................................................................................................................................................................................................	25	16	0.25	4	1	1	2	0	0	0
.........GGCGTTGATACCGGAGAAGATGG................................................................................................................................................................................................................................	23	17	0.24	4	3	1	0	0	0	0
...................CCGGAGAAGATGGCCGTCATTT.......................................................................................................................................................................................................................	22	13	0.23	3	1	1	0	0	1	0
................................................................................................................CCTGGCAAGCCACCCGGGCAC...........................................................................................................................	21	5	0.20	1	0	1	0	0	0	0
.........................................................................................................................CCACCCGGGCAAGCAGCAT....................................................................................................................	19	5	0.20	1	0	1	0	0	0	0
.......CTGGCGTTGATACCGGAGAAGATGGC...............................................................................................................................................................................................................................	26	15	0.20	3	2	0	1	0	0	0
............................................................................ATTTGGAAGATGCAGAGGCTACTCC...........................................................................................................................................................	25	18	0.17	3	3	0	0	0	0	0
..........................................................................................................................CACCCGGGCAAGCAGCATC...................................................................................................................	19	6	0.17	1	0	1	0	0	0	0
...................CCGGAGAAGATGGCCGTCATT........................................................................................................................................................................................................................	21	13	0.15	2	2	0	0	0	0	0
............................................................................................................AAAGCCTGGCAAGCCACCC.................................................................................................................................	19	7	0.14	1	0	1	0	0	0	0
..........GCGTTGATACCGGAGAAGATGGC...............................................................................................................................................................................................................................	23	16	0.13	2	0	2	0	0	0	0
...........................................................................AATTTGGAAGATGCAGAGGCTACTC............................................................................................................................................................	25	18	0.11	2	0	2	0	0	0	0
..........................................................................CAATTTGGAAGATGCAGAGGCTACTCC...........................................................................................................................................................	27	18	0.11	2	0	2	0	0	0	0
.....................................................TACTGGAGGGCACCTTTCCGGC.....................................................................................................................................................................................	22	20	0.10	2	1	1	0	0	0	0
.............................................TCAGTGTCTACTGGAGGGCACCTTTCCGG......................................................................................................................................................................................	29	11	0.09	1	1	0	0	0	0	0
..................................................GTCTACTGGAGGGCACCTTTCCGGCAAT..................................................................................................................................................................................	28	11	0.09	1	1	0	0	0	0	0
.................................................TGTCTACTGGAGGGCACCTTTCCGG......................................................................................................................................................................................	25	11	0.09	1	1	0	0	0	0	0
...................................................TCTACTGGAGGGCACCTTTCCGGC.....................................................................................................................................................................................	24	11	0.09	1	1	0	0	0	0	0
..................................................GTCTACTGGAGGGCACCTTTCCG.......................................................................................................................................................................................	23	12	0.08	1	1	0	0	0	0	0
..................................................GTCTACTGGAGGGCACCTTTC.........................................................................................................................................................................................	21	12	0.08	1	1	0	0	0	0	0
............................................ATCAGTGTCTACTGGAGGGCACCTT...........................................................................................................................................................................................	25	12	0.08	1	0	1	0	0	0	0
.............................................TCAGTGTCTACTGGAGGGCACC.............................................................................................................................................................................................	22	13	0.08	1	0	1	0	0	0	0
................ATACCGGAGAAGATGGCCGTCAT.........................................................................................................................................................................................................................	23	13	0.08	1	0	1	0	0	0	0
.................TACCGGAGAAGATGGCCGTCATTT.......................................................................................................................................................................................................................	24	13	0.08	1	0	1	0	0	0	0
.............................................TCAGTGTCTACTGGAGGGCAC..............................................................................................................................................................................................	21	13	0.08	1	0	1	0	0	0	0
..............TGATACCGGAGAAGATGGCCGT............................................................................................................................................................................................................................	22	13	0.08	1	1	0	0	0	0	0
.....................................................TACTGGAGGGCACCTTTCCGGCAATT.................................................................................................................................................................................	26	15	0.07	1	1	0	0	0	0	0
.....TCCTGGCGTTGATACCGGAGAAGATGGC...............................................................................................................................................................................................................................	28	15	0.07	1	0	0	1	0	0	0
.............................................................................................GCTACTCCTCCTGCCAAAGCCTGG...........................................................................................................................................	24	16	0.06	1	1	0	0	0	0	0
.........GGCGTTGATACCGGAGAAGATGGC...............................................................................................................................................................................................................................	24	16	0.06	1	0	1	0	0	0	0
...........CGTTGATACCGGAGAAGATGGC...............................................................................................................................................................................................................................	22	16	0.06	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................TCGGCGGCCTGGCAGCGGAGCAAT.	24	16	0.06	1	1	0	0	0	0	0
..............................................................................TTGGAAGATGCAGAGGCTACTCCTC.........................................................................................................................................................	25	17	0.06	1	0	1	0	0	0	0
.....................................................................TCCGGCAATTTGGAAGATGCAGAGG..................................................................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................GGTCGGCGGCCTGGCAGCGGAGCA...	24	17	0.06	1	1	0	0	0	0	0
............................................................................ATTTGGAAGATGCAGAGGCTACTCCTCC........................................................................................................................................................	28	17	0.06	1	1	0	0	0	0	0
.............................................................................TTTGGAAGATGCAGAGGCTACTCCTC.........................................................................................................................................................	26	17	0.06	1	0	1	0	0	0	0
.........................................................................GCAATTTGGAAGATGCAGAGGCTACTCC...........................................................................................................................................................	28	17	0.06	1	1	0	0	0	0	0
.........................................................................GCAATTTGGAAGATGCAGAGGCTACT.............................................................................................................................................................	26	17	0.06	1	0	1	0	0	0	0
.........................................................................GCAATTTGGAAGATGCAGAGGC.................................................................................................................................................................	22	17	0.06	1	0	1	0	0	0	0
..................................................................................AAGATGCAGAGGCTACTCCTCC........................................................................................................................................................	22	17	0.06	1	1	0	0	0	0	0
.....................................................................TCCGGCAATTTGGAAGATGCAGA....................................................................................................................................................................	23	17	0.06	1	0	1	0	0	0	0
.............................................................................TTTGGAAGATGCAGAGGCTACT.............................................................................................................................................................	22	18	0.06	1	1	0	0	0	0	0
..............................................................................TTGGAAGATGCAGAGGCTACTCC...........................................................................................................................................................	23	18	0.06	1	0	1	0	0	0	0
...........................................................................AATTTGGAAGATGCAGAGGCTACTCC...........................................................................................................................................................	26	18	0.06	1	0	1	0	0	0	0
..............................................................................TTGGAAGATGCAGAGGCTACTCCT..........................................................................................................................................................	24	18	0.06	1	0	0	1	0	0	0
..............TGATACCGGAGAAGATGGC...............................................................................................................................................................................................................................	19	18	0.06	1	0	0	1	0	0	0
.............................................................................TTTGGAAGATGCAGAGGCTACTCC...........................................................................................................................................................	24	18	0.06	1	0	1	0	0	0	0
..............................................................................TTGGAAGATGCAGAGGCTACTC............................................................................................................................................................	22	18	0.06	1	0	1	0	0	0	0
............................................................................ATTTGGAAGATGCAGAGGCTA...............................................................................................................................................................	21	18	0.06	1	1	0	0	0	0	0

droBip1

ACTGGCTCTGGCACTGCAGCCGGGAAGTTTTGCGGAGCTGTTCAACAGATGCATCCGCGAAGGCACCTTTCCCACCAGGTGGAAGGTGCAGAAGCTCCTGCTGCTACAAAAACCAGGGAAACCAAGGGAGGAGGCGTCGTCCTATAGGCCAATCTGCCTGCTGGACACAACGGGCAAGGTTTTCG----AGAGGGTGATCGCTTCGAGGCTCGAAGCCGCAATAGAGGAGGCGGGAGGGCTATCGCCAAAGCAGTA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GCC-ATAATGAAGTCATACCCAAGCCTATTTGCACAGGTATACAACAGGTGCATTGCGGAGCGCACTTTTCCAAGAGTATGGAAGCAGCAGAGACTAGTGCTCATCCCTAAACCAGGCAAAACGAATGACGACCCGTCCTCATATCGCCCCCTGTGCATGCTCAACACACTGGGGAAGATATTTG----AGCGCATAATCTGCAACAAGTTGGAGAGAGAGATCGAAGAGCGTGGAGCTCTATCGAATCAGCAGCA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GACCTTAATTGCCGCACGTCCGGATATATTCGTTGAGCTATTCAACAAATGCATTGGTGAATGCACAATTCCGCGAAGATGGAAAACACAGCGTCTGGTACTCATTCCAAAGCCGGGGAAACATCAAGAGGACCCGTCAGCATATCGTCCATTGTGTATGCTGGACACGACTGGCAAGATCCTGG----AGAGGCTGATCTGCAATCGTATAGAGAACGAGCTTGAAAGCCGGCAAGGACTCTCAAACCACCAATA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CACAATAGTGGCAGCTTACCCGGGTATATTCACGGAAATGTACAACAAGTGTCTCATCCAACGAACCTTCCCCACAGGATGGAAGCGGCAGAGATTAGTGCTCATCCCAAAACCGGGCAAGATGAACGATGACGCATCGTCATACAGGCCCCTTTGCATGCTAGATACAATGGGTAAGATGCTCA----A-------ATATGCACCCGCCTCGAAAAGGAGCTCGACGATCTTGGAGCTTTCTCGGACCACCAGTT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ACTAGCCATCAGCATGTACCCGAGCACCTTTGCCAGTGCATACACTAAGTGCCTGGCCCAAGC-CTGCTTCCCAGACGGTGGAAACAGCAAAAGCTGGTGCTTATTCCAAAGCCAGGAAAAGACAAGGATGAACCGTCGGCTTATAGGCCCATTTGCCTTCTAGACACGGCCGGCAAAATATTGG----AAAGTATTGTCAGTGCAAGACTCGGAGAGGCAATAGAGGCTGCCGGAGGGCTCTCAGAAAGTCAGTA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGCAGCCATAAAAGCAA--ACAAAACAGTATGTTGGCATGTATAATGCATGCTTAACAGAAGGTCTGTTCCCTAGTCGCTGGAAAACTCAGCGGTTGGTACTCATACCAAAGGGGGACAAGCCAGCGGAGAAGCCTTCTTCGTATAGGCCACTCTGCATGCTGGATAAGGTGTGTAAAATTTTTG----AAAGAATAATCCACTCCCGGCTAAAGGGTGCCCTTGTCGAAACCAACGGCCTCTCTGAGATGCAGTA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CACAATGGTGGCAGCTTACCCGGGTATATTCACGGAGATATACAACAAGTGTCTCACCCAACGAACCTTCCCCACAGGATGAAAGCGGCAGAGATTGGTGCTCATCCCTAAACCCGGCAAGATAACCGACGACGCATCCTCATACAGACCCCTATGTATGCTAAATACGATGGGAAAGATATTTG----AGCGCATAATCTGCACCCACCTCGCAAAGAAGTTCGACGAACTCAGATCGTTGTCGTACCACCAGTT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AATTGCAATTAGGGCAAATACAAAAGAGTACGTTGATATGTATAACGGTTGCCTAACGGAAGGAGTGTTCCCCAGACGCTGGAAAACACAGCGGTTGGTACTCATACCAAATGGGGACAAACCGGTGGAGGAACCTTCTTCGTACAGGCCGCTATGTATGCTGGATACGGTGGGCAAAATTGCGG----AGAGAATAATCCACTCCCGGCTGGAGGGTGCCCTTGCCGAAACCAATGGCCTCTCCGAGATGCAGTA	Size	Hit Count	Total Norm	Total
No Reads

dm3

GCATTGGCGTTCGGTA-GACCTGACATCTTCAGGACCACCTTACAGCAATGTCTTTTGGACGGAATCTTTTCAATAAGGTGGAAAAGCCAGAAAATAGTTCTGCTGCACAAATGCAAGGGATCAGCATATGCTGCAAACAGCTACCGCCCTCTATGCCTACTAAATATAGTTGGAAAACTGTCCG----AAGATATCTTGTATACTCGAATAGAGGCCG---TCGATGCTCTCAGTGACGAAGGAAGTCAGCAATA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................................................................................................................................................TATAGTTGGAAAACTGTCCG----AAGATA.............................................................	26	3	4.33	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	3	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TGCTCTCAGTGACGAAGGAAGTCAG.....	25	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................TCTCAGTGACGAAGGAAGTCAGCAATA	27	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
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..................................................................................................................................GCTGCAAACAGCTACCGCCCTCTATC....................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GCTACCGCCCTCTATGCC..................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................AAACAGCTACCGCCCTCTATGA...................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

GCTTGGAATGTACGAGCACCCGGAAGCATTCGCAGCCGTCTTCAACCAGTGTCTCACGGAAGGCTTCTTTCCAGAGCGTTGGAAGAGACAGAAGCTGGTACTGCTCCCCAAGCCCAACAAGCCGCCCGAGGACCCATCCTCATACAGACCGATATGCCTGATCGACCACATCGGCAAGGCTTTCG----AACGCTGTATCAGCCTCAGACTGCACGAGGCCATCTCCGCTGCAGGGGACCTCTCAGAAATGCAGTT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..........................................................................................................................................................TGCCTGATCGACCACAT.....................................................................................	17	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

GCTTGCTCTCTACCTCCAGCCAGACTCGTTTGCGAAGGCATTCACCAAGTGCCTGGAGGAAGGAGTTTTCCCGAGTTGCTGGAAAATCCAAAAGCTGCTTCTCCTCCCAAAACCAGGGAAACCACCCGAGGAGCCTTCATCGTTCCGGCCAATATGCCTCATTGATGGAACTGGCAAGCTCCTGG----AGAAACTGATGTGCATTCGGCTTGAGAGGACTATCGCCGACGCGGGTGACCTCTCACGGTCCCAGTT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..TTGCTCTCTACCTCCAGCCAGACT......................................................................................................................................................................................................................................	24	20	2.30	46	42	0	4	0
......................................CATTCACCAAGTGCCTGGAGGAA...................................................................................................................................................................................................	23	20	0.75	15	15	0	0	0
..TTGCTCTCTACCTCCAGCCAGACTC.....................................................................................................................................................................................................................................	25	20	0.70	14	13	0	1	0
..TTGCTCTCTACCTCCAGCCAGAC.......................................................................................................................................................................................................................................	23	20	0.70	14	14	0	0	0
......................................CATTCACCAAGTGCCTGGAGGA....................................................................................................................................................................................................	22	20	0.65	13	12	0	1	0
.......................................................................................CCAAAAGCTGCTTCTCCTCCCAAAACC..............................................................................................................................................	27	20	0.40	8	5	0	2	1
......................................CATTCACCAAGTGCCTGGAGGAAGGA................................................................................................................................................................................................	26	20	0.40	8	8	0	0	0
...............................................................................................................................................TCCGGCCAATATGCCTCATTGATGGAAC.....................................................................................	28	8	0.38	3	3	0	0	0
..............................................................................................................................................................TCATTGATGGAACTGGCAAGCTC...........................................................................	23	8	0.38	3	1	0	1	1
......................................CATTCACCAAGTGCCTGGAGGAAGG.................................................................................................................................................................................................	25	20	0.35	7	7	0	0	0
.............................................................................................GCTGCTTCTCCTCCCAAAACCAGGGA.........................................................................................................................................	26	20	0.35	7	7	0	0	0
.............................................................................................GCTGCTTCTCCTCCCAAAACCAGG...........................................................................................................................................	24	20	0.35	7	7	0	0	0
.................................................................................................................................................................................................................CTTGAGAGGACTATCGCCGAC..........................	21	3	0.33	1	1	0	0	0
.......................................................................................................................................................................................GG----AGAAACTGATGTGCATTCGGC..............................................	23	3	0.33	1	1	0	0	0
.......................................................................................................................................................................................GG----AGAAACTGATGTGCATTCGGCTT............................................	25	3	0.33	1	1	0	0	0
.......................................................................................................................................................................................GG----AGAAACTGATGTGCATTCGGCT.............................................	24	3	0.33	1	1	0	0	0
......................................................................................................................................................................................TGG----AGAAACTGATGTGCATTCGGC..............................................	24	3	0.33	1	1	0	0	0
.............................................................................................................................................................................................AGAAACTGATGTGCATTCGGC..............................................	21	3	0.33	1	1	0	0	0
....................................................................................................................................................................................................................GAGAGGACTATCGCCGACGCG.......................	21	3	0.33	1	0	0	0	1
.........................................................................................................................................................................................................................GACTATCGCCGACGCGGGTGT..................	21	3	0.33	1	0	0	0	1
..TTGCTCTCTACCTCCAGCCAGA........................................................................................................................................................................................................................................	22	20	0.30	6	6	0	0	0
......................................CATTCACCAAGTGCCTGGAGGAAG..................................................................................................................................................................................................	24	20	0.30	6	6	0	0	0
.............................................................................................GCTGCTTCTCCTCCCAAAACCAGGG..........................................................................................................................................	25	20	0.25	5	5	0	0	0
...................................................................TTCCCGAGTTGCTGGAAAATCCAAA....................................................................................................................................................................	25	20	0.25	5	4	0	1	0
.................................................................................................................................................................TTGATGGAACTGGCAAGCT............................................................................	19	8	0.25	2	1	0	1	0
..........................................................................................................................................................TGCCTCATTGATGGAACTGGCAAGCTC...........................................................................	27	8	0.25	2	1	0	1	0
.......................................................................................CCAAAAGCTGCTTCTCCTCCCAAAAC...............................................................................................................................................	26	20	0.20	4	4	0	0	0
..TTGCTCTCTACCTCCAGCCAGACTCG....................................................................................................................................................................................................................................	26	20	0.15	3	3	0	0	0
...TGCTCTCTACCTCCAGCCAGACT......................................................................................................................................................................................................................................	23	20	0.15	3	3	0	0	0
.........................................TCACCAAGTGCCTGGAGGAAGGAGT..............................................................................................................................................................................................	25	20	0.15	3	2	0	0	1
....................................................................TCCCGAGTTGCTGGAAAATCCAAA....................................................................................................................................................................	24	20	0.15	3	1	0	1	1
...................................................................TTCCCGAGTTGCTGGAAAATCC.......................................................................................................................................................................	22	20	0.15	3	3	0	0	0
..............................................................................................................................................................TCATTGATGGAACTGGCAAG..............................................................................	20	8	0.13	1	0	0	1	0
...........................................................................................................................................................GCCTCATTGATGGAACTGGCAAGCTT...........................................................................	26	8	0.13	1	1	0	0	0
.............................................................................................................................................................CTCATTGATGGAACTGGCAAGCTCT..........................................................................	25	8	0.13	1	0	0	0	1
.....................................................................................................................................................CAATATGCCTCATTGATGGAACTGGCA................................................................................	27	8	0.13	1	1	0	0	0
..............................................................................................................................................................TCATTGATGGAACTGGCAAGCTCC..........................................................................	24	8	0.13	1	1	0	0	0
...............................................................................................................................................TCCGGCCAATATGCCTCATTGATGGAA......................................................................................	27	8	0.13	1	1	0	0	0
...............................................................................................................................................TCCGGCCAATATGCCTCATTGATGGAACT....................................................................................	29	8	0.13	1	1	0	0	0
..............................................................................................................................................................TCATTGATGGAACTGGCAAGCTCCT.........................................................................	25	8	0.13	1	0	0	1	0
......................................................................................................................................................AATATGCCTCATTGATGGAACTGGC.................................................................................	25	8	0.13	1	1	0	0	0
.............................................................................................................................................................CTCATTGATGGAACTGGCAAGCTC...........................................................................	24	8	0.13	1	0	0	1	0
...............................................................................................................................................................CATTGATGGAACTGGCAAGCTCCT.........................................................................	24	8	0.13	1	1	0	0	0
........................................................................................................................................................TATGCCTCATTGATGGAACTGGCAAG..............................................................................	26	8	0.13	1	1	0	0	0
..............................................................................................................................................................TCATTGATGGAACTGGCAA...............................................................................	19	8	0.13	1	1	0	0	0
..........................................................................................................................................................TGCCTCATTGATGGAACTGGCA................................................................................	22	8	0.13	1	0	0	0	1
.......................................................................................................................................TTCATCGTTCCGGCCAATATGCCTCATT.............................................................................................	28	8	0.13	1	1	0	0	0
..............................................................................................................................................................TCATTGATGGAACTGGCAAGCT............................................................................	22	8	0.13	1	0	0	1	0
........................................................................................................................................................TATGCCTCATTGATGGAACTGGCA................................................................................	24	8	0.13	1	1	0	0	0
..............................................................................................................................................TTCCGGCCAATATGCCTCATTGATGG........................................................................................	26	8	0.13	1	1	0	0	0
...............................................................................................................................................................CATTGATGGAACTGGCAAGCTC...........................................................................	22	8	0.13	1	0	0	1	0
..................................................................................................................................................................TGATGGAACTGGCAAGCTCC..........................................................................	20	8	0.13	1	0	0	1	0
...............................................................................................................................................................CATTGATGGAACTGGCAAGTA............................................................................	21	9	0.11	1	1	0	0	0
.......................................ATTCACCAAGTGCCTGGAGGA....................................................................................................................................................................................................	21	20	0.10	2	2	0	0	0
.......................................................................................CCAAAAGCTGCTTCTCCTCCCAAA.................................................................................................................................................	24	20	0.10	2	2	0	0	0
....................................................................TCCCGAGTTGCTGGAAAATCCAAAAGC.................................................................................................................................................................	27	20	0.10	2	1	0	1	0
.......................................................................................................................................TTCATCGTTCCGGCCAATATGCCTC................................................................................................	25	20	0.10	2	2	0	0	0
...........................................................................................................................ACCCGAGGAGCCTTCATCGTTCCGGC...........................................................................................................	26	20	0.10	2	0	0	2	0
......................................CATTCACCAAGTGCCTGGAG......................................................................................................................................................................................................	20	20	0.10	2	2	0	0	0
..............................................................................................CTGCTTCTCCTCCCAAAACCAGGGA.........................................................................................................................................	25	20	0.10	2	2	0	0	0
......................................CATTCACCAAGTGCCTGGA.......................................................................................................................................................................................................	19	20	0.10	2	2	0	0	0
....................................................................TCCCGAGTTGCTGGAAAATCCAAAA...................................................................................................................................................................	25	20	0.10	2	2	0	0	0
.........................................................................................................................................CATCGTTCCGGCCAATATGCCTCA...............................................................................................	24	20	0.10	2	1	0	1	0
.......................................................................................CCAAAAGCTGCTTCTCCTCCCAA..................................................................................................................................................	23	20	0.10	2	2	0	0	0
..................................................................................................................AGGGAAACCACCCGAGGAGCCTTCATCG..................................................................................................................	28	20	0.05	1	1	0	0	0
...............................................................................................................................GAGGAGCCTTCATCGTTCCGGCCA.........................................................................................................	24	20	0.05	1	1	0	0	0
.....................................................................................................................................................................TGGAACTGGCAAGCTCCTGG----...................................................................	20	20	0.05	1	1	0	0	0
..............................................................................................................................CGAGGAGCCTTCATCGTTCCGGCCAATA......................................................................................................	28	20	0.05	1	1	0	0	0
..TTGCTCTCTACCTCCAGCCAGC........................................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0
............................TTTGCGAAGGCATTCACCAAGTGCC...........................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0
.......................................................................................................................................TTCATCGTTCCGGCCAATATGCCTCAT..............................................................................................	27	20	0.05	1	1	0	0	0
..........................................................................................................................................ATCGTTCCGGCCAATATGCCTCA...............................................................................................	23	20	0.05	1	1	0	0	0
GCTTGCTCTCTACCTCCAGCCAGACTC.....................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.......................................ATTCACCAAGTGCCTGGAGGAAT..................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
............................................................................................................................................................................................................................TATCGCCGACGCGGGTGACCTCTC............	24	20	0.05	1	1	0	0	0
...................................................................TTCCCGAGTTGCTGGAAAATCCAAAAGC.................................................................................................................................................................	28	20	0.05	1	1	0	0	0
.................................................................................................................CAGGGAAACCACCCGAGGAGCCTTC......................................................................................................................	25	20	0.05	1	1	0	0	0
........................................TTCACCAAGTGCCTGGAGGAAG..................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
......................................................................................TCCAAAAGCTGCTTCTCCTCCCAAAACC..............................................................................................................................................	28	20	0.05	1	1	0	0	0
.......................................................................................CCAAAAGCTGCTTCTCCTC......................................................................................................................................................	19	20	0.05	1	0	0	1	0
...............................................................................................................................................................................................................................CGCCGACGCGGGTGACCTCTCAC..........	23	20	0.05	1	1	0	0	0
...TGCTCTCTACCTCCAGCCAGACTCGTTT.................................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0
..............................................................................................CTGCTTCTCCTCCCAAAACCAGGGAA........................................................................................................................................	26	20	0.05	1	1	0	0	0
..........................................................................................................................CACCCGAGGAGCCTTCATCGTTCCGGC...........................................................................................................	27	20	0.05	1	1	0	0	0
......................................CATTCACCAAGTGCCTGG........................................................................................................................................................................................................	18	20	0.05	1	0	0	1	0
...............................................AGTGCCTGGAGGAAGGAGTTTTC..........................................................................................................................................................................................	23	20	0.05	1	0	0	1	0
....................................................................TCCCGAGTTGCTGGAAAATCC.......................................................................................................................................................................	21	20	0.05	1	1	0	0	0
.........................................TCACCAAGTGCCTGGAGGAAGGA................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
............................................................................................................................CCCGAGGAGCCTTCATCGTTCCGGC...........................................................................................................	25	20	0.05	1	1	0	0	0
.....................................GCATTCACCAAGTGCCTGGAGGAAGGA................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
............................................................................................................................................................................................................................TATCGCCGACGCGGGTGACCTCTA............	24	20	0.05	1	1	0	0	0
.......................................................................................................................................TTCATCGTTCCGGCCAATA......................................................................................................	19	20	0.05	1	1	0	0	0
.............................................................................................GCTGCTTCTCCTCCCAAAACCAGGGAAAC......................................................................................................................................	29	20	0.05	1	1	0	0	0
............................................CCAAGTGCCTGGAGGAAGGAGTTTTCC.........................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
....................................................................................................................................GCCTTCATCGTTCCGGCCAATATGC...................................................................................................	25	20	0.05	1	1	0	0	0
......TCTCTACCTCCAGCCAGACTCGTTTGC...............................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	1
.............................................................................................................................................................................................................................ATCGCCGACGCGGGTGACCTCTCACG.........	26	20	0.05	1	1	0	0	0
........................................................................................CAAAAGCTGCTTCTCCTCCCAAAACC..............................................................................................................................................	26	20	0.05	1	1	0	0	0
..................................................................TTTCCCGAGTTGCTGGAAAATCCAAA....................................................................................................................................................................	26	20	0.05	1	1	0	0	0
..TTGCTCTCTACCTCCAGCCAGACTCGT...................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
..........................................CACCAAGTGCCTGGAGGAAGGAGT..............................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
.......................................................................................CCAAAAGCTGCTTCTCCTCCCAAAAT...............................................................................................................................................	26	20	0.05	1	1	0	0	0
..........................................CACCAAGTGCCTGGAGGAAGGAGTT.............................................................................................................................................................................................	25	20	0.05	1	0	0	1	0
..TTGCTCTCTACCTCCAGCCAGACC......................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
.....................................................TGGAGGAAGGAGTTTTCCCGAGT....................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
...TGCTCTCTACCTCCAGCCAGACTC.....................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
...........................................................AAGGAGTTTTCCCGAGTTGCTGGAAAA..........................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.......................................................................................................................................TTCATCGTTCCGGCCAATATGCCTCA...............................................................................................	26	20	0.05	1	0	0	1	0
....................................................................TCCCGAGTTGCTGGAAAATCCAA.....................................................................................................................................................................	23	20	0.05	1	1	0	0	0
............................TTTGCGAAGGCATTCACCAAGTGCCT..........................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
......................................CATTCACCAAGTGCCTGGAGGAAGGC................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
............................TTTGCGAAGGCATTCACCAAGTGC............................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0
..................................................................TTTCCCGAGTTGCTGGAAAATCC.......................................................................................................................................................................	23	20	0.05	1	1	0	0	0
.......................................................................................CCAAAAGCTGCTTCTCCTCCCAAAC................................................................................................................................................	25	20	0.05	1	1	0	0	0
...........................................ACCAAGTGCCTGGAGGAAGGAA...............................................................................................................................................................................................	22	20	0.05	1	0	0	1	0
......................................................................CCGAGTTGCTGGAAAATCCAAAAGC.................................................................................................................................................................	25	20	0.05	1	0	0	1	0
......TCTCTACCTCCAGCCAGACTCGTTT.................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
.............................................................................................GCTGCTTCTCCTCCCAAAACCAGGGAA........................................................................................................................................	27	20	0.05	1	1	0	0	0
........TCTACCTCCAGCCAGACTCGTTTGCGT.............................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
...................................................................................................................GGGAAACCACCCGAGGAGCCTTCATCG..................................................................................................................	27	20	0.05	1	1	0	0	0
....................................................................................................................................GCCTTCATCGTTCCGGCCAATATGCC..................................................................................................	26	20	0.05	1	1	0	0	0

droYak3

GCTTGGAATGTACGAGCACCCGGAAGCATTCGCAGCCGTCTTCAACCAGTGTCTCACGGAAGGCTCCTTTCCAGAGCGCTGGAAGAGACAGAAGCTGGTACTGCTCCCCAAGCCCAACAAGCCGCCCGAGGACCAATCCTCATACAGACCGATATGCCTGATCGACCACATCGGCAAGGCTTTCG----AACGCTGTATCAGCCTCAGACTGCACGAGGCCATCTCCGCTGCAGGGGACCTCTCAGAAATGCAGTT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................CCGTCTTCAACCAGTGTCTCACG......................................................................................................................................................................................................	23	7	2.57	18	0	18	0	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCCCAACAAGC......................................................................................................................................	28	5	2.40	12	0	11	1	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCACGG.....................................................................................................................................................................................................	24	7	2.14	15	0	15	0	0	0	0	0	0	0	0	0
..........................................................................................................CCCAAGCCCAACAAGCCGCCCGAGGAC...........................................................................................................................	27	5	2.00	10	0	0	0	0	0	0	0	0	0	0	10
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGCACG........................................	25	15	2.00	30	0	23	0	0	0	0	0	0	0	0	7
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGCA..........................................	23	18	1.94	35	0	35	0	0	0	0	0	0	0	0	0
..................................GCCGTCTTCAACCAGTGTCTCACGGA....................................................................................................................................................................................................	26	7	1.71	12	0	0	0	0	0	0	0	0	0	0	12
................................................................................................................................................CAGACCGATATGCCTGATCGACC.........................................................................................	23	18	1.33	24	0	15	9	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCACGGA....................................................................................................................................................................................................	25	7	1.14	8	0	7	0	0	0	0	0	0	0	0	1
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGCACGA.......................................	26	15	1.13	17	0	9	1	0	0	0	0	0	0	0	7
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGCAC.........................................	24	17	1.06	18	0	18	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGACC.........................................................................................	25	18	1.06	19	0	13	6	0	0	0	0	0	0	0	0
.........................................TCAACCAGTGTCTCACGGAAGGCTCC.............................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCCCAACA.........................................................................................................................................	25	5	0.80	4	0	4	0	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCCCAAC..........................................................................................................................................	24	5	0.80	4	0	4	0	0	0	0	0	0	0	0	0
........................................................................................................................................TCCTCATACAGACCGATATGCCTG................................................................................................	24	17	0.65	11	0	11	0	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCCC.............................................................................................................................................	21	5	0.60	3	0	2	1	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCCCA............................................................................................................................................	22	5	0.60	3	0	3	0	0	0	0	0	0	0	0	0
................................................................................................................................................CAGACCGATATGCCTGATCGACCACA......................................................................................	26	17	0.59	10	0	9	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGC...........................................	22	19	0.58	11	1	8	2	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCACGGAA...................................................................................................................................................................................................	26	7	0.57	4	0	2	0	0	0	0	0	0	0	0	2
..............................................................................................................................................TACAGACCGATATGCCTGATCGAC..........................................................................................	24	19	0.47	9	0	7	2	0	0	0	0	0	0	0	0
........................................................................................................................................TCCTCATACAGACCGATATGCCTGA...............................................................................................	25	17	0.47	8	0	7	0	0	0	0	1	0	0	0	0
....................................CGTCTTCAACCAGTGTCTCACG......................................................................................................................................................................................................	22	7	0.43	3	0	3	0	0	0	0	0	0	0	0	0
...............................................................................................TGGTACTGCTCCCCAAGCCCAACA.........................................................................................................................................	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TCTCCGCTGCAGGGGACCTCTCAGA.........	25	5	0.40	2	0	2	0	0	0	0	0	0	0	0	0
................................................................................................................................................CAGACCGATATGCCTGATCGACCAC.......................................................................................	25	17	0.35	6	0	6	0	0	0	0	0	0	0	0	0
................................................................................................................................................CAGACCGATATGCCTGATCGACCA........................................................................................	24	17	0.35	6	0	6	0	0	0	0	0	0	0	0	0
........................................................................................................................................TCCTCATACAGACCGATATGCCTGATC.............................................................................................	27	17	0.35	6	0	4	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGACTGCACGAGGCCATCTCCGC...........................	25	9	0.33	3	0	1	2	0	0	0	0	0	0	0	0
.....................................................................TCCAGAGCGCTGGAAGAGACAGAAGC.................................................................................................................................................................	26	10	0.30	3	0	1	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGCACGAGG.....................................	28	10	0.30	3	0	3	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGCACGAG......................................	27	10	0.30	3	0	3	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGACCA........................................................................................	26	17	0.29	5	0	5	0	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCACGGAAGG.................................................................................................................................................................................................	28	7	0.29	2	0	2	0	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCACGGAAT..................................................................................................................................................................................................	27	7	0.29	2	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................................................................CCTGATCGACCACATCGGCAAGGCT...........................................................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
..........TACGAGCACCCGGAAGCATTCGCAGA............................................................................................................................................................................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................GACCACATCGGCAAGGCTTTCG----A..................................................................	23	4	0.25	1	0	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................GCCTGATCGACCACATCGGCAAGG.............................................................................	24	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
........TGTACGAGCACCCGGAAGCATTCGCAG.............................................................................................................................................................................................................................	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................ATCGACCACATCGGCAAGGCTT..........................................................................	22	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................ACCGATATGCCTGATCGACCACATCGG..................................................................................	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGACCAC.......................................................................................	27	17	0.24	4	0	3	1	0	0	0	0	0	0	0	0
................................................................................................................................................CAGACCGATATGCCTGATCGAC..........................................................................................	22	19	0.21	4	0	2	2	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGA...........................................................................................	23	19	0.21	4	0	2	0	0	0	0	1	0	0	0	1
..TTGGAATGTACGAGCACCCGGAAG......................................................................................................................................................................................................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TTCG----AACGCTGTATCAGCCTCAGACTG............................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................ACGCTGTATCAGCCTCAGACTGCACG........................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................TACTGCTCCCCAAGCCCAACAAGCC.....................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TCTCCGCTGCAGGGGACCTCTCAGAAA.......	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AACGCTGTATCAGCCTCAGACTGCA..........................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................G----AACGCTGTATCAGCCTCAGACTGCA..........................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TCTCCGCTGCAGGGGACCTCTCAGAA........	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................AGGCTTTCG----AACGCTGTATCAGC.....................................................	23	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0
.......................AAGCATTCGCAGCCGTCTTCAACCAG...............................................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................TGCTCCCCAAGCCCAACAAGCCGCCCGA...............................................................................................................................	28	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCCCAACAAG.......................................................................................................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCCCAT...........................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................TCCTCATACAGACCGATATGCCT.................................................................................................	23	17	0.18	3	0	3	0	0	0	0	0	0	0	0	0
..........................................................................................GAAGCTGGTACTGCTCCCCAAGCC..............................................................................................................................................	24	12	0.17	2	0	1	1	0	0	0	0	0	0	0	0
...............................................................................TGGAAGAGACAGAAGCTGGTACTGC........................................................................................................................................................	25	13	0.15	2	0	1	1	0	0	0	0	0	0	0	0
........................................TTCAACCAGTGTCTCACGGAAGGCT...............................................................................................................................................................................................	25	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0
.....................................GTCTTCAACCAGTGTCTCACGGAA...................................................................................................................................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCACGGAAGGC................................................................................................................................................................................................	29	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCAC.......................................................................................................................................................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
......................................TCTTCAACCAGTGTCTCACGGAAGGC................................................................................................................................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
........................................TTCAACCAGTGTCTCACGGA....................................................................................................................................................................................................	20	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
...................................CCGTCTTCAACCAGTGTCTCACGT.....................................................................................................................................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
......................................TCTTCAACCAGTGTCTCACGGA....................................................................................................................................................................................................	22	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0
....................................CGTCTTCAACCAGTGTCTCACGTCC...................................................................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
......................................TCTTCAACCAGTGTCTCACGGAAGGCT...............................................................................................................................................................................................	27	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................ATCAGCCTCAGACTGCACGAGGCC...................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................CACGAGGCCATCTCCGCTGCAGGGGACC................	28	8	0.13	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................TCCTCATACAGACCGATATGCCTGATCG............................................................................................	28	17	0.12	2	0	2	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................CCTCAGACTGCACGAGGCCATCTCCGC...........................	27	9	0.11	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................CCTCAGACTGCACGAGGCCATCTCCGT...........................	27	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGACTGCACGAGGCCATCTCCGCTG.........................	27	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGACTGCACGAGGCCATCTC..............................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................CCTCAGACTGCACGAGGCCATCTC..............................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................CGAGGCCATCTCCGCTGCAGGGGAC.................	25	9	0.11	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................CGAGGCCATCTCCGCTGCAGGGGACC................	26	9	0.11	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AGCCTCAGACTGCACGAGGCCATC................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................TCCTCATACAGACCGATATGCC..................................................................................................	22	18	0.11	2	0	2	0	0	0	0	0	0	0	0	0
...................................................................................................................................................ACCGATATGCCTGATCGACCACA......................................................................................	23	18	0.11	2	0	2	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCG............................................................................................	22	19	0.11	2	0	2	0	0	0	0	0	0	0	0	0
................................................................................................................................................CAGACCGATATGCCTGATCGACA.........................................................................................	23	19	0.11	2	0	2	0	0	0	0	0	0	0	0	0
.....................................................................TCCAGAGCGCTGGAAGAGACAG.....................................................................................................................................................................	22	10	0.10	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................GCTGTATCAGCCTCAGACTGCA..........................................	22	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
....................................................................TTCCAGAGCGCTGGAAGAGACAGAAGC.................................................................................................................................................................	27	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TGTATCAGCCTCAGACTGCACGAGGC....................................	26	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CTCCGCTGCAGGGGACCTCTC............	21	12	0.08	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................CTGGTACTGCTCCCCAAGCC..............................................................................................................................................	20	13	0.08	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................GCTGGAAGAGACAGAAGCTGGTACTG.........................................................................................................................................................	26	13	0.08	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTGCACGT.......................................	26	15	0.07	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................AGCGCTGGAAGAGACAGAAGCTGG..............................................................................................................................................................	24	16	0.06	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................AGAGCGCTGGAAGAGACAGAAG..................................................................................................................................................................	22	16	0.06	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGACCACA......................................................................................	28	17	0.06	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGACCACT......................................................................................	28	17	0.06	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................CAGACCGATATGCCTGATCGACCATTA.....................................................................................	27	17	0.06	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................ACAGACCGATATGCCTGATCGACC.........................................................................................	24	18	0.06	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................AGACCGATATGCCTGATCGACC.........................................................................................	22	18	0.06	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGACCAT.......................................................................................	27	18	0.06	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GTATCAGCCTCAGACTGCACG........................................	21	18	0.06	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CGCTGTATCAGCCTCAGACTG............................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................GCTGTATCAGCCTCAGACTGCAC.........................................	23	19	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................CATACAGACCGATATGCCTG................................................................................................	20	19	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................TACAGACCGATATGCCTGATCGC...........................................................................................	23	19	0.05	1	0	0	0	0	0	0	0	0	0	0	1
.................................................................................................................................................AGACCGATATGCCTGATCGAC..........................................................................................	21	19	0.05	1	0	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................TCATACAGACCGATATGCCTGAT..............................................................................................	23	19	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................CAGACCGATATGCCTGATCGA...........................................................................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TCATACAGACCGATATGCCTG................................................................................................	21	19	0.05	1	0	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................GCTGTATCAGCCTCAGACTGCAT.........................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................CTGTATCAGCCTCAGACTGCA..........................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

GCTAGGCATGAACGAGTACCCGGAAGCATTCGCAAATGTTTTTAACCAGTGCCTCACAGAAGGCCTTTTCCAAAAGCGCTGGAAAAGGCAGAAGCTGGTACTGCTTCCCAAGCCAAACAAGCCTCCCGAGAGTCCATCTTCATATAGGCCGATATGCCTGATTGACCACTTGGGCAAAGCTTTCG----AGCGATGCCTTAGCAATAGACTGCACGTTGCCATCTCCGCTGCAGGGGATCTTTCGCCAATGCAGTT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----AG.................................................................	24	20	2.10	42	20	0	0	0	1	0	21
..TAGGCATGAACGAGTACCCGGAA.......................................................................................................................................................................................................................................	23	1	2.00	2	1	0	0	0	0	0	1
..TAGGCATGAACGAGTACCCGGA........................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..TAGGCATGAACGAGTACCCGGAAG......................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
..TAGGCATGAACGAGTACCCG..........................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
..TAGGCATGAACGAGTACCCGGAAGCA....................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..................................................................TTTCCAAAAGCGCTGGAAAAGGCAGA....................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................TGCCTTAGCAATAGACTGCACGTTG.....................................	25	1	1.00	1	1	0	0	0	0	0	0
...................................................................TTCCAAAAGCGCTGGAAAAGGCAGAAGC.................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
......................................................CACAGAAGGCCTTTTCCAAAAGCGC.................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----A..................................................................	23	20	0.85	17	6	0	0	0	2	0	9
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----AGCGA..............................................................	27	20	0.70	14	14	0	0	0	0	0	0
.....................................................................................................................................................................................TTCG----AGCGATGCCTTAGCAATAGAC..............................................	25	8	0.63	5	3	0	0	0	0	0	2
.........................................................................................................................................................................TTGGGCAAAGCTTTCG----AGCGATGCC..........................................................	25	20	0.55	11	0	0	0	0	0	0	11
............................................................................................................................................CATATAGGCCGATATGCCTGA...............................................................................................	21	2	0.50	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................TGCAGGGGATCTTTCGCCAATGCAGT.	26	2	0.50	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................CTCCGCTGCAGGGGATCTTTCAT..........	23	2	0.50	1	1	0	0	0	0	0	0
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----AGC................................................................	25	20	0.35	7	7	0	0	0	0	0	0
.....................................................................................................................................................................CCACTTGGGCAAAGCTTTCG----AGCGA..............................................................	25	20	0.25	5	5	0	0	0	0	0	0
..................................................................................................................................................................................................TGCCTTAGCAATAGACTGCACG........................................	22	12	0.17	2	2	0	0	0	0	0	0
...........................................................................................................CCAAGCCAAACAAGCCTCCCGAGAG............................................................................................................................	25	18	0.17	3	0	0	0	0	0	0	3
...........................................................................................................................................................GCCTGATTGACCACTTGGGCAAAGCTTT.........................................................................	28	20	0.15	3	3	0	0	0	0	0	0
....................................................................................................................................................................................TTTCG----AGCGATGCCTTAGCAATAGAC..............................................	26	7	0.14	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................CG----AGCGATGCCTTAGCAATAGACTGC...........................................	26	8	0.13	1	1	0	0	0	0	0	0
......................................................................................................................................................................................TCG----AGCGATGCCTTAGCAATAGAC..............................................	24	8	0.13	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................TTCG----AGCGATGCCTTAGCAATAGACT.............................................	26	8	0.13	1	0	0	0	0	1	0	0
...................................................................................................................................................................................CTTTCG----AGCGATGCCTTAGCAATAT................................................	25	8	0.13	1	1	0	0	0	0	0	0
......................................................................................................................................................................................TCG----AGCGATGCCTTAGCAATAGACTGC...........................................	27	8	0.13	1	0	0	0	0	0	0	1
..................................................................................................TACTGCTTCCCAAGCCAAACAAGCC.....................................................................................................................................	25	17	0.12	2	2	0	0	0	0	0	0
..................................................................................................TACTGCTTCCCAAGCCAAACAAGCCT....................................................................................................................................	26	17	0.12	2	2	0	0	0	0	0	0
........................................................................................................TTCCCAAGCCAAACAAGCCTCCCGAG..............................................................................................................................	26	18	0.11	2	2	0	0	0	0	0	0
...............................................................................................TGGTACTGCTTCCCAAGCCAAACAAGC......................................................................................................................................	27	18	0.11	2	1	1	0	0	0	0	0
.......................................................................................................................................................................................CG----AGCGATGCCTTAGCAATA.................................................	20	10	0.10	1	1	0	0	0	0	0	0
.................................................................................................................................................................TTGACCACTTGGGCAAAGCTTT.........................................................................	22	20	0.10	2	2	0	0	0	0	0	0
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----AA.................................................................	24	20	0.10	2	2	0	0	0	0	0	0
...........................................................................................................................................................GCCTGATTGACCACTTGGGCAAAGCT...........................................................................	26	20	0.10	2	2	0	0	0	0	0	0
......................................................................................................................................................................................TCG----AGCGATGCCTTAGCAATAG................................................	22	10	0.10	1	1	0	0	0	0	0	0
........................................................................................................................................................................................G----AGCGATGCCTTAGCAACT.................................................	19	11	0.09	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................TGCCTTAGCAATAGACTGCAC.........................................	21	12	0.08	1	1	0	0	0	0	0	0
.....................................................................................................TGCTTCCCAAGCCAAACAAGCCTCC..................................................................................................................................	25	16	0.06	1	1	0	0	0	0	0	0
............................TTCGCAAATGTTTTTAACCAGTGCCT..........................................................................................................................................................................................................	26	17	0.06	1	1	0	0	0	0	0	0
........................................................................................................TTCCCAAGCCAAACAAGCCTCCCGAGAG............................................................................................................................	28	17	0.06	1	1	0	0	0	0	0	0
............................TTCGCAAATGTTTTTAACCAGT..............................................................................................................................................................................................................	22	18	0.06	1	1	0	0	0	0	0	0
............................................................................................AGCTGGTACTGCTTCCCAAGCCAAACA.........................................................................................................................................	27	18	0.06	1	1	0	0	0	0	0	0
..............................................................................................................AGCCAAACAAGCCTCCCGAGAGTC..........................................................................................................................	24	18	0.06	1	1	0	0	0	0	0	0
.................................................................................................GTACTGCTTCCCAAGCCAAACAAGC......................................................................................................................................	25	18	0.06	1	1	0	0	0	0	0	0
..................................................................................................TACTGCTTCCCAAGCCAAACAAGC......................................................................................................................................	24	18	0.06	1	1	0	0	0	0	0	0
...................................................................................................ACTGCTTCCCAAGCCAAACAAG.......................................................................................................................................	22	18	0.06	1	1	0	0	0	0	0	0
...............................................................................................................GCCAAACAAGCCTCCCGAGAGTC..........................................................................................................................	23	18	0.06	1	1	0	0	0	0	0	0
..............................................................................................................AGCCAAACAAGCCTCCCGAGAGT...........................................................................................................................	23	18	0.06	1	0	0	0	0	0	0	1
..............................................................................................................AGCCAAACAAGCCTCCCGAGAGTCCATC......................................................................................................................	28	18	0.06	1	0	0	0	0	1	0	0
........................................................................................................TTCCCAAGCCAAACAAGCCTCCCG................................................................................................................................	24	19	0.05	1	1	0	0	0	0	0	0
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----AGA................................................................	25	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................................................................TGATTGACCACTTGGGCAAAGCTT..........................................................................	24	20	0.05	1	0	0	0	0	0	1	0
....................................................................................................................................................................ACCACTTGGGCAAAGCTTTCG----AGCGA..............................................................	26	20	0.05	1	1	0	0	0	0	0	0
..............................................................................................................................................................................CAAAGCTTTCG----AGCGATGCCTTAGC.....................................................	25	20	0.05	1	1	0	0	0	0	0	0
....................................................................................................................................................................ACCACTTGGGCAAAGCTTTCG----AGCGAT.............................................................	27	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................................TGCCTGATTGACCACTTGGG..................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................................TGACCACTTGGGCAAAGCTTTCG----...................................................................	23	20	0.05	1	1	0	0	0	0	0	0
.................................................................................................................................................................TTGACCACTTGGGCAAAGCTTTCG----AGC................................................................	27	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................GGCCGATATGCCTGATTGACCACT......................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................................................................................................AAAGCTTTCG----AGCGATGCCTTAGC.....................................................	24	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................TTCG----AGCGATGCCTTAGCA....................................................	19	20	0.05	1	1	0	0	0	0	0	0
.................................................................................................................................................................................AGCTTTCG----AGCGATGCCTTAT......................................................	21	20	0.05	1	1	0	0	0	0	0	0
....................................................................................................................................................................ACCACTTGGGCAAAGCTTTCG----A..................................................................	22	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................................................TGGGCAAAGCTTTCG----AGCGA..............................................................	20	20	0.05	1	1	0	0	0	0	0	0
............................................................................................................................................................CCTGATTGACCACTTGGGCA................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................................................................................................CCACTTGGGCAAAGCTTTCG----AGCGAA.............................................................	26	20	0.05	1	1	0	0	0	0	0	0
....................................................................................................................................................................ACCACTTGGGCAAAGCTTTCG----AG.................................................................	23	20	0.05	1	1	0	0	0	0	0	0
...........................................................................................................................................................GCCTGATTGACCACTTGGGCAAAG.............................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................................................................................................CCACTTGGGCAAAGCTTTCG----AGCGAT.............................................................	26	20	0.05	1	1	0	0	0	0	0	0
........................................................................................................................................................TATGCCTGATTGACCACTTGG...................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
........................................................................................................................................................TATGCCTGATTGACCACTTG....................................................................................	20	20	0.05	1	1	0	0	0	0	0	0
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----AC.................................................................	24	20	0.05	1	0	0	0	0	0	0	1
...................................................................................................................................................................GACCACTTGGGCAAAGCTTTCG----AGCGAACT...........................................................	30	20	0.05	1	0	0	0	0	1	0	0
..........................................................................................................................................................................TGGGCAAAGCTTTCG----AGCGATG............................................................	22	20	0.05	1	0	0	0	0	1	0	0

dvi_21292

scaffold_13050:605603-605753 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-37.0	-36.5	-36.4