dvi_2108

exon [dvir_GLEANR_7864:1]; exon [dvir_GLEANR_7864:2]; CDS [Dvir\GJ22520-cds]; CDS [Dvir\GJ22520-cds]; intron [Dvir\GJ22520-in]

Name	Class	Family	Strand
DOC2_DM	LINE	Jockey	+

##################################################----------------------------------------------------------------------------------------------------------################################################## AGCAGGCCTTCGACCGAGTCTGGATTAAAGGATTGCTCCAGAAAATTAAGGTGAGTCTTCCCGCCCCCGTTCTTTCTACTTCTGCGCTGTTATCTAATGGAGTAAAAGTTCGAAGAGTGCGTCAGGACAGCAATCTCTTCTGTTCTCAATATAAAGGCGGGTGGCCCTCAACGCAGCGTACTGGGCCCCTTCCTCTACACTTCGTA ************************************************((..(((((..(((.....((((((..((((.(((.(((((....))))).))).))))..)))))).)))..))))).)).........................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	SRR060675 140x9_ovaries_total	V116 male body	SRR060660 Argentina_ovaries_total	SRR060662 9x160_0-2h_embryos_total
................................................................................................................AAGAGTGCGTCAGGACAGCA..........................................................................	20	0	1	1.00	1	0	0	1	0	0
...........................................................................................................GTTCGAAGAGTGCGTCAGGAC..............................................................................	21	0	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................CAACGCAGCGTACTGGGCC...................	19	0	1	1.00	1	0	1	0	0	0
...AGGCCTTCGACCGAGTCTGGATC....................................................................................................................................................................................	23	1	4	0.25	1	1	0	0	0	0
...................................................................................GCGCTGTTATCTGACGGAG........................................................................................................	19	2	6	0.17	1	0	0	0	1	0
............ACTAATTCTGGATTAAAGG...............................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	1

TCGTCCGGAAGCTGGCTCAGACCTAATTTCCTAACGAGGTCTTTTAATTCCACTCAGAAGGGCGGGGGCAAGAAAGATGAAGACGCGACAATAGATTACCTCATTTTCAAGCTTCTCACGCAGTCCTGTCGTTAGAGAAGACAAGAGTTATATTTCCGCCCACCGGGAGTTGCGTCGCATGACCCGGGGAAGGAGATGTGAAGCAT ************************************************((..(((((..(((.....((((((..((((.(((.(((((....))))).))).))))..)))))).)))..))))).)).........................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060659 Argentina_testes_total	SRR060675 140x9_ovaries_total	SRR060683 160_testes_total	V053 head	M027 male body	GSM1528803 follicle cells	SRR060663 160_0-2h_embryos_total
................................................................................................................................TCGTTAGAGAAGACAAGAGTT.........................................................	21	0	1	1.00	1	1	0	0	0	0	0	0
TCGTCCGGAAGCTGGCTCAGACCT......................................................................................................................................................................................	24	0	3	0.33	1	0	1	0	0	0	0	0
.CGTCCGGAAGCTGGCTCAGACCT......................................................................................................................................................................................	23	0	3	0.33	1	0	1	0	0	0	0	0
...TCCGGAAGCTGACTCAGACCT......................................................................................................................................................................................	21	1	4	0.25	1	0	0	1	0	0	0	0
.........................................................................................................................................................................................GGGAAAGGAGAAGTGATGCA.	20	3	8	0.13	1	0	0	0	1	0	0	0
.................................................CCACTCAGCAGAGCGAGGG..........................................................................................................................................	19	3	10	0.10	1	0	0	0	0	1	0	0
.................................................................GGGCAAGACAGTTGAAAACGC........................................................................................................................	21	3	12	0.08	1	0	0	1	0	0	0	0
.......................................TCGTTTAATTCGACGCAGAA...................................................................................................................................................	20	3	20	0.05	1	0	0	0	0	0	0	1
...........CTGGCACAGACCGAGTTTC................................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	1	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12736:358499-358704 +	dvi_2108	AGCAGGCCTTCGACCGAGTCTGGATTAAAGGATTGCTCCAGAAAATTAAGGTGAGTCTTCCCGCCCCCGTTCTTTCTACTTCTGCGCTGTTATCTAATGGAGTAAAAGTTCGAAGAGTGCGTC---AGGACAGCAATCTCTTCTGTTCTCAATATAAAGGCGGGTGGCCCTCAACGCAGCGTACTGGGCCCCTTCCTCTACACTTCGTA
droMoj3	scaffold_6482:1066198-1066402 +		AGCAAGCCTTCGATCGTGTATGGCATTTAGGATTGTTGCAAAAAGCAAGGGCAAGCCTCCCAGCGTC-TATTTTTATGCTGCTGTCATCCTACATCACTGACCGAAGCTTTCAAGTGACTAAG---GGACAGGCTATATCGTCGGCAAGACCTATCAAGGCTGGAGTCCCTCAAGGCAGTGTACTGGGGCCTACATTGTACACACTGTA
droGri2	scaffold_8459:7948-8155 -		AGGAGGCCTTCGACAGAGTCTGGCACGATGGCTTGCTGAACAAACTAATCAAGCTTCTCCCCATCTC-CCTGTACCAAGTCCTGGAAAGCTACCTCTTGGATCGCACATTTGTTGTCAAGAGTGAAGGAAACACCACATCCAGGATTGGTAGGATATCAGCGGGTGTACCGCAAGGCAGCGTCTTGGGCCCGATTCTGTACTCCATATA
droWil2	scf2_1100000004949:463800-464004 +		AGCAGGCCTTTGATCGAGTCTGGCATGATGGGCTCCTGCACAAAATAAAGCTGCTTCTCCCCGCCCC-GTACTACATGGTACTTAAATCATACATCTTGGACAGACGGTTTTACGTTAGGTGT---GAGAGTTCCTTATCAAGAATAGAGCACATCAAAGCGGGCGTCCCTCAGGGCAGTGTACTGGGCCCTATACTATACACCTTGTA
dp5	XR_group5:3243-3450 +		AGGAAGCTTTTGATAGAGTCTGGCATCAGGGTCTACTCTGCAAAGTTAAAACGATAATACCTGACAA-TTTATACATTCTACTCACCAGCTATCTCTCAGACAGAAGCTTCAAAGTCGTCTGCTGCAACAACATCACCTCAAGCCTAAAGCACATAACCGCTGGAGTGCCGCAAGGAAGCGTACTTGGCCCAGTGCTCTACAATCTCTA
droPer2	scaffold_3857:573-777 -		AACAAGCGTTTGACCGGGTGTGGCTTGATGGCCTCCTCTTTAAGCTGAGAAACATATTGCCCCCGCA-GCTATTCCAGCTGGTGAGTAGCTTTCTAATGGACAGAAGTTTTAGTGTTGTTGTA---AATGGAGCAAAATCATCGAAGCGCCCAATCTGTGCAGGCGTCCCTCAAGGCAGTGTTCTTGGACCAACGTTATATACCCTATA
droAna3	scaffold_13089:872024-872228 +		AGCAGGCTTTCGACCGAGTCTGGCATCCCGGTCTATTATACAAATTAAAGACTGGCCTACCCCGACC-ATACTTCCAGTTCCTTAAATCTTTCTTGGAAGACCGTAAATTTTCGGTAAGATGC---GGCGATGCCATCTCCGGTCTACGAGAAGTTCACGCTGGTGTCCCCCAAGGCAGCGTTCTTGGCCCGTTGATGTACAACGCTTA
droBip1	scf7180000392053:6012-6213 +		AGCAAGCGTTCGACCGAGTCTGGCATCCCGGTCTTCTATATAAATTAAAGATTGGCCTACCCCGACC-ATACTTCCAGTTCCTAAA---GTTCTTGGAAGACCGTAAATTTGCGGTAAGATGC---GGCGAGGCAATCTCCGGTCTAAGAGAAGCTCACGCTGGTGTACCCCATGGCAGCGTTCTTGGCCCGTTGATCTACAACGCTTA
droKik1	scf7180000298165:963-1167 +		AGCAGGCTTTCGACAGGGTCTGGCACGAGGGGCTTCTGTCCAAGATCAAAGAGCTCCTGCCACCACA-GCTCTTTGAGATCATCTGCAGCTACCTCAAGGATAGGAGCTTCCAGGTGGTGCAG---GATGGAGTTGCCTCCTCCACCAGGAATATCAGAGCTGGTGTCCCTCAAGGAAGCGTATTAGGACCCACGCTCTACAATCTATT
droFic1	scf7180000451493:807-1011 +		AACAGGCGTTCGACAGGGTCTGGCACACAGGCCTTTTGTACAAATTAAAAAAGGTACTCCCTGCTCC-GTACTACCTTTTTCTCAAGTCGTACCTGCACAAAAGGAGTTTCTACGTGCGATGT---GGAGACGAAGAATCCGACCTTATGGAAATCAATGCAGGAGTACCCCAAGGCAGTGTACTGGGCCCCATCCTCTACATCATTTA
droEle1	scf7180000487618:22471-22672 +		AACAAGCCTTTGACAAGGTCTGGCACGAGGGCCTCCTTTATAAAATCAAGGAACTCCTTCCTGCACC-CTACTTCGCCATCCTGAAGTCATTTATTGCCGATAGAACCTTCGAAGTAGCGGTA---AGGGAAGCATGATCCAGTTTGGCATACATACATGCAGGAGTGCCCCAAGGAAG---ACTTGGTCCGTTCCTATACACCATGTA
droRho1	scf7180000776701:2997-3188 +		AGCAAGCGTTTGATAGTGTTTGGCACAATGGATTACTCTATAAGATAATGAAATGGCTACCTGCTCC-CTACTAGTTACTACTGAGATCCTATTTGTCTAAGAAATGCT-------G---------AGATATGATACGTCAACAATACTTCTCATAAACGTAGGCGTTCCTCAAGGGAGTGTATTGGGACCATTCCTTTACACTTTATA
droBia1	scf7180000296981:204-407 +		CACAGGCTTTCGATCGAGTCTGGCTTGATGGCCTTATGCAAAAAT-CAGAACTATTCTGCCAGAAAA-CACTCACAGTATACTTGAATCATACCTTTACAACATAGAATTCGCCGTGTGATGC---AAAACTACAACATCCGCTGATTACACTATAAAGGCTGGAGGTCGCGAAAGTCGCTCCCTTGGTCCAACTCTATTTCTCTTTCA
droTak1	scf7180000414216:4908-5112 +		AGCAAGCCTTCGATCGAGTCAGGCACTGTGGCTTGCTCTATAAGCTGAAACCCATTCTTCCCCCGAC-ATACTTTAATCTCCTTCGCTCATTTCTAATTGCTAGAACCTTCCAGGTGCATGTT---CGAGGATCCAAGTCTGCCTCAAGGCCTATTCTAGCTGGAGTCCCTCAAGGAAGTGTGCTGGGTCCTGTCTTGTATACAATATT
droEug1	scf7180000409499:4493-4697 -		AACAAGCGTTTGATCGAGTCTGGCACAAAGGTTTATTGTACAAAATAAAAAAATTTCTACCTTCTCC-GTATTACTTAATAATCAAATCATATCTTAATAAAAGATGCTTTTACGAGCAGCAG---AAAAACGATTCATCAACGTTACTTCTTATTAATGCAGGCGTCCCACAAGGAAGCGTATTGGGGCCAATCCTCTATACTTTATA
dm3	chr2L:13600107-13600311 -		AGCAGGCGTTCGACAGAGTGTGGCATCCTGGACTCCTCTACAAACTCAAGTCCCACCTTCCCAGTTC-CCACTATGCCCTACTGAAATCGTATACTGAAGGAAGAGAGTTCCAAGTGCGATGC---GGTTCCTCAACAAGCACGACAAGGCCTATACGAGCCAGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTGTT
droSim2	2l:19603204-19603403 +		AGCAGGCGTTCGACAGAGTGTGGCATCCTGGACTCCTCTACAAACCCGAGTCCCACCTTCCCAGTTC-ACACTATGCCATACTCAAATCGTATACTGAAGGAAGAGAGTTCCAAGTGCGATGC---GGTTCCTCAACC-----AGCACGCGAAATACGAGCCGGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTTTT
droSec2	scaffold_2739:3527-3731 -		AGCAGGCGTTCGACAAAGTGTGGCATCCTGGACTCCTCTACAAACTCAAGTCCCACCTTCCCAGTTC-ACACTATGCCCTACTCAAATCGTAAACTGAAGGAAGAGAGTTCCAAGTGCGATGC---GGCTCCTCAACCAGCACGCCAAGGCCCATACGAGCCGGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTATT
droYak3	3R:582884-583088 +		AACAAGCGTTTGATCGAGTCTGGCACAATGGATTACTATATAAAATTAAAAAGTGGCTACCTGCACC-ATATTTCTTATTATTAAAGTCATACCTAACAAATAGACACTTTTACGTGCAACAA---AAAAATGAATCCTCGTCGTTGTTCACTATAAAGGCTGGAGTCCCACAAGGCAGCGTCTTAGGGCCTGTTTTATACACCCTGTA
droEre2	scaffold_4710:97814-98018 -		AGCAGACGTTCGACAGAGTGTGGCATCCCGGACTCCTCCACAAACTCAAGTCCAACCTTCCCAGTTC-CCACTACGCTCTACTCAAATAGTATACTGAAGGAAGAGAATTCCAAGTGCGATGC---GGATCCTCAACCAGCACGCCAAGGCCCATACGAGCCGGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTGTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

AGCAGGCCTTCGACCGAGTCTGGATTAAAGGATTGCTCCAGAAAATTAAGGTGAGTCTTCCCGCCCCCGTTCTTTCTACTTCTGCGCTGTTATCTAATGGAGTAAAAGTTCGAAGAGTGCGTC---AGGACAGCAATCTCTTCTGTTCTCAATATAAAGGCGGGTGGCCCTCAACGCAGCGTACTGGGCCCCTTCCTCTACACTTCGTA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
................................................................................................................AAGAGTGCGTC---AGGACAGCA..........................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................................................................................GTTCGAAGAGTGCGTC---AGGAC..............................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................CAACGCAGCGTACTGGGCC...................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...AGGCCTTCGACCGAGTCTGGATC.......................................................................................................................................................................................	23	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AGCAAGCCTTCGATCGTGTATGGCATTTAGGATTGTTGCAAAAAGCAAGGGCAAGCCTCCCAGCGTC-TATTTTTATGCTGCTGTCATCCTACATCACTGACCGAAGCTTTCAAGTGACTAAG---GGACAGGCTATATCGTCGGCAAGACCTATCAAGGCTGGAGTCCCTCAAGGCAGTGTACTGGGGCCTACATTGTACACACTGTA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
....................................................................................TCATCCTACATCACTGACCGAAGC.....................................................................................................	24	1	12.00	12	12	0	0	0	0	0
...........................................................................................ACATCACTGACCGAAGCTTTCAAG..............................................................................................	24	1	8.00	8	6	0	0	0	2	0
....................................................................................TCATCCTACATCACTGACCGAAGCTT...................................................................................................	26	1	5.00	5	5	0	0	0	0	0
...................................................................................................................................GGCTATATCGTCGGCAAGACCTAT......................................................	24	1	5.00	5	5	0	0	0	0	0
..........................................................................................TACATCACTGACCGAAGCTTTCAAG..............................................................................................	25	1	5.00	5	2	1	0	0	1	1
..............................GATTGTTGCAAAAAGCAAGGGCAAGC.........................................................................................................................................................	26	1	5.00	5	5	0	0	0	0	0
..............................GATTGTTGCAAAAAGCAAGGGC.............................................................................................................................................................	22	1	4.00	4	4	0	0	0	0	0
...................................................................................................................................GGCTATATCGTCGGCAAGACCTATC.....................................................	25	1	3.00	3	2	0	0	0	1	0
..........................................................................................TACATCACTGACCGAAGCTTTCAAGT.............................................................................................	26	1	3.00	3	2	1	0	0	0	0
....................................................................................TCATCCTACATCACTGACCGAAGCT....................................................................................................	25	1	3.00	3	3	0	0	0	0	0
.....................................................................................CATCCTACATCACTGACCGAAG......................................................................................................	22	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................GGCTATATCGTCGGCAAGACCTATCAAG..................................................	28	1	2.00	2	1	0	0	0	0	1
..............................GATTGTTGCAAAAAGCAAGGGCA............................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
..............................GATTGTTGCAAAAAGCAAGGGCAAG..........................................................................................................................................................	25	1	2.00	2	1	0	0	0	0	1
...........................................................................................ACATCACTGACCGAAGCTTTCAAGTGAC..........................................................................................	28	1	2.00	2	2	0	0	0	0	0
.......................................................................................TCCTACATCACTGACCGAAGCTTTC.................................................................................................	25	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................GGCTATATCGTCGGCAAGACCT........................................................	22	1	2.00	2	1	0	0	0	1	0
...........................................................................................ACATCACTGACCGAAGCTTTCAAGTG............................................................................................	26	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................TAAG---GGACAGGCTATATCGTCGGC...............................................................	24	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................CCTCAAGGCAGTGTACTGGGGCCTACA..............	27	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................GGCTATATCGTCGGCAAGACCTATCA....................................................	26	1	1.00	1	1	0	0	0	0	0
............ATCGTGTATGGCATTTAGGATTGTTGC..........................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...............................ATTGTTGCAAAAAGCAAGGGCAAGC.........................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
............................................................................................CATCACTGACCGAAGCTTTCAAGT.............................................................................................	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................TATCGTCGGCAAGACCTATCAAGGCT...............................................	26	1	1.00	1	0	0	0	0	0	1
...........................................................................................ACATCACTGACCGAAGCTTTCAA...............................................................................................	23	1	1.00	1	1	0	0	0	0	0
................................................................................................ACTGACCGAAGCTTTCAAGTGA...........................................................................................	22	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................TATCAAGGCTGGAGTCCCTCAAGGCAG..............................	27	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................TGGAGTCCCTCAAGGCAGTGTACTGGG.....................	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................TATCAAGGCTGGAGTCCCTCAAGGCA...............................	26	1	1.00	1	1	0	0	0	0	0
..............................................................................................................TCAAGTGACTAAG---GGACAGGCTATATC.....................................................................	27	1	1.00	1	0	0	0	0	0	1
..............................GATTGTTGCAAAAAGCAAGGGCAAGCCT.......................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...............GTGTATGGCATTTAGGATTGTTG...........................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
............ATCGTGTATGGCATTTAGGATTGT.............................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
............................................................................................CATCACTGACCGAAGCTTTCAAGTGA...........................................................................................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................................................CAAGTGACTAAG---GGACAGGCT..........................................................................	21	1	1.00	1	1	0	0	0	0	0
......................GCATTTAGGATTGTTGCAAAAAGCAA.................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................GTCGGCAAGACCTATCAAGGCTGG.............................................	24	1	1.00	1	1	0	0	0	0	0
....................................................................................TCATCCTACATCACTGACCGAA.......................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..............................................................................................TCACTGACCGAAGCTTTCAAGTGAC..........................................................................................	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................CAGTGTACTGGGGCCTACATTGTACC.......	26	1	1.00	1	1	0	0	0	0	0
...........................................................................................ACATCACTGACCGAAGCTTTCAAGT.............................................................................................	25	1	1.00	1	0	0	0	0	1	0
...................................................................................................GACCGAAGCTTTCAAGTGACC.........................................................................................	21	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................TGGAGTCCCTCAAGGCAGTGTACTGG......................	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................GGCTATATCGTCGGCAAGACCTA.......................................................	23	1	1.00	1	1	0	0	0	0	0
............ATCGTGTATGGCATTTAGGATTG..............................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................GCTATATCGTCGGCAAGACCTAT......................................................	23	1	1.00	1	1	0	0	0	0	0
..........................................................................................TACATCACTGACCGAAGCTTT..................................................................................................	21	1	1.00	1	0	0	0	0	1	0
........................................................................................................AAGCTTTCAAGTGACTAAG---GGA................................................................................	22	1	1.00	1	1	0	0	0	0	0
..........CGATCGTGTATGGCATTTAGGAT................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................CCTCAAGGCAGTGTACTGGGGCCTAC...............	26	1	1.00	1	1	0	0	0	0	0
............ATCGTGTATGGCATTTAGGATTGTTG...........................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................CCTCAAGGCAGTGTACTGGGGCCTG................	25	1	1.00	1	1	0	0	0	0	0
....................................................................................TCATCCTACATCACTGACCGAAG......................................................................................................	23	1	1.00	1	0	0	0	0	1	0
.......................................................................................TCCTACATCACTGACCGAAGCTTTCAAG..............................................................................................	28	1	1.00	1	1	0	0	0	0	0
..........................................................................................TACATCACTGACCGAAGCTTTCAAGTGAC..........................................................................................	29	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................GACCTATCAAGGCTGGAGTCCCTCA....................................	25	2	0.50	1	1	0	0	0	0	0
AGCAAGCCTTCGATCGTGTATGG..........................................................................................................................................................................................	23	6	0.17	1	1	0	0	0	0	0

droGri2

AGGAGGCCTTCGACAGAGTCTGGCACGATGGCTTGCTGAACAAACTAATCAAGCTTCTCCCCATCTC-CCTGTACCAAGTCCTGGAAAGCTACCTCTTGGATCGCACATTTGTTGTCAAGAGTGAAGGAAACACCACATCCAGGATTGGTAGGATATCAGCGGGTGTACCGCAAGGCAGCGTCTTGGGCCCGATTCTGTACTCCATATA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

AGCAGGCCTTTGATCGAGTCTGGCATGATGGGCTCCTGCACAAAATAAAGCTGCTTCTCCCCGCCCC-GTACTACATGGTACTTAAATCATACATCTTGGACAGACGGTTTTACGTTAGGTGT---GAGAGTTCCTTATCAAGAATAGAGCACATCAAAGCGGGCGTCCCTCAGGGCAGTGTACTGGGCCCTATACTATACACCTTGTA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
............................................................................................................TTTTACGTTAGGTGT---GAGAGTTCC..........................................................................	24	5	1.80	9	0	8	0	1	0
........................................CAAAATAAAGCTGCTTCTCCCCG..................................................................................................................................................	23	2	1.00	2	0	2	0	0	0
............................................................................................................TTTTACGTTAGGTGT---GAGAGTTCCT.........................................................................	25	4	0.75	3	0	1	0	2	0
..........................................................................................TACATCTTGGACAGACGGTTTTACGT.............................................................................................	26	4	0.75	3	0	0	0	3	0
...AGGCCTTTGATCGAGTCTGGCATG......................................................................................................................................................................................	24	8	0.63	5	0	5	0	0	0
............ATCGAGTCTGGCATGATGGGCT...............................................................................................................................................................................	22	12	0.50	6	0	2	0	4	0
...............................................AAGCTGCTTCTCCCCGCCCC-GTAC.........................................................................................................................................	24	2	0.50	1	0	1	0	0	0
......................................CACAAAATAAAGCTGCTTCTCCCCGC.................................................................................................................................................	26	2	0.50	1	0	1	0	0	0
.....................................GCACAAAATAAAGCTGCTTCTCCC....................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
.....................................GCACAAAATAAAGCTGCTTCTCC.....................................................................................................................................................	23	2	0.50	1	0	1	0	0	0
.............................................TAAAGCTGCTTCTCCCCGCCCC-GTAC.........................................................................................................................................	26	2	0.50	1	0	1	0	0	0
...............................................AAGCTGCTTCTCCCCGCCCC-GTACTAC......................................................................................................................................	27	2	0.50	1	0	1	0	0	0
............ATCGAGTCTGGCATGATGGGCTC..............................................................................................................................................................................	23	12	0.42	5	0	5	0	0	0
........TTTGATCGAGTCTGGCATGATGGG.................................................................................................................................................................................	24	8	0.38	3	0	2	0	1	0
...AGGCCTTTGATCGAGTCTGGCATGA.....................................................................................................................................................................................	25	8	0.38	3	0	3	0	0	0
.................................................................................CTTAAATCATACATCTTGGACAG.........................................................................................................	23	3	0.33	1	0	1	0	0	0
....................................................................................AAATCATACATCTTGGACAGACGGT....................................................................................................	25	3	0.33	1	0	1	0	0	0
...............GAGTCTGGCATGATGGGCTCCTG...........................................................................................................................................................................	23	12	0.33	4	0	4	0	0	0
............ATCGAGTCTGGCATGATGG..................................................................................................................................................................................	19	12	0.33	4	0	0	1	3	0
...........................................................................................................................................CAAGAATAGAGCACATCAAAGCGGG.............................................	25	7	0.29	2	0	2	0	0	0
...........................................................................................................................................CAAGAATAGAGCACATCAAAGCG...............................................	23	7	0.29	2	0	2	0	0	0
............................................................................................................TTTTACGTTAGGTGT---GAGAGTTC...........................................................................	23	8	0.25	2	0	2	0	0	0
............................................................................................................TTTTACGTTAGGTGT---GAGAGTT............................................................................	22	8	0.25	2	0	2	0	0	0
...AGGCCTTTGATCGAGTCTGGCA........................................................................................................................................................................................	22	8	0.25	2	0	2	0	0	0
............ATCGAGTCTGGCATGATGGG.................................................................................................................................................................................	20	12	0.25	3	0	1	0	2	0
.......CTTTGATCGAGTCTGGCATGATG...................................................................................................................................................................................	23	8	0.25	2	0	0	0	2	0
..........................................................................................TACATCTTGGACAGACGG.....................................................................................................	18	4	0.25	1	0	1	0	0	0
........................................................................................CATACATCTTGGACAGACGG.....................................................................................................	20	4	0.25	1	0	1	0	0	0
.......CTTTGATCGAGTCTGGCATGATGG..................................................................................................................................................................................	24	8	0.25	2	0	2	0	0	0
..................TCTGGCATGATGGGCTCCTG...........................................................................................................................................................................	20	12	0.25	3	0	2	0	1	0
............ATCGAGTCTGGCATGATGGGC................................................................................................................................................................................	21	12	0.25	3	0	1	0	2	0
...........................................................................................ACATCTTGGACAGACGGTTTTACGT.............................................................................................	25	4	0.25	1	1	0	0	0	0
..................TCTGGCATGATGGGCTCCTGCA.........................................................................................................................................................................	22	9	0.22	2	0	2	0	0	0
..................TCTGGCATGATGGGCTCCTGCACA.......................................................................................................................................................................	24	9	0.22	2	0	2	0	0	0
..................TCTGGCATGATGGGCTCCTGCAC........................................................................................................................................................................	23	9	0.22	2	0	2	0	0	0
.............................................................................................................TTTACGTTAGGTGT---GAGAGTTCC..........................................................................	23	5	0.20	1	0	1	0	0	0
......................................................................................................................................................CACATCAAAGCGGGCGTCCCTCAGGG.................................	26	5	0.20	1	0	1	0	0	0
............ATCGAGTCTGGCATGATGGGCTCC.............................................................................................................................................................................	24	12	0.17	2	0	2	0	0	0
.............TCGAGTCTGGCATGATGGGCT...............................................................................................................................................................................	21	12	0.17	2	0	2	0	0	0
............ATCGAGTCTGGCATGATGGGCTT..............................................................................................................................................................................	23	12	0.17	2	0	0	0	2	0
..............................GGCTCCTGCACAAAATAAAGCTGC...........................................................................................................................................................	24	7	0.14	1	0	1	0	0	0
...........................................................................................................................................CAAGAATAGAGCACATCAAAGCGGGC............................................	26	7	0.14	1	0	1	0	0	0
..............................................................................................................................................GAATAGAGCACATCAAAGCGGGCG...........................................	24	7	0.14	1	0	1	0	0	0
.........................................................................................................................................ATCAAGAATAGAGCACATCAAAGCG...............................................	25	7	0.14	1	0	1	0	0	0
.........................TGATGGGCTCCTGCACAAAATAAAGC..............................................................................................................................................................	26	7	0.14	1	0	0	0	1	0
..........................................................................................................................................................TCAAAGCGGGCGTCCCTCAGGG.................................	22	7	0.14	1	0	1	0	0	0
.....................................................................................................................................................GCACATCAAAGCGGGCGTCCC.......................................	21	7	0.14	1	0	1	0	0	0
.................................................................................................................................................TAGAGCACATCAAAGCGGGCGTCCC.......................................	25	7	0.14	1	0	1	0	0	0
...........................................................................................................................................................CAAAGCGGGCGTCCCTCAGGGC................................	22	7	0.14	1	0	1	0	0	0
..........................................................................................................................................TCAAGAATAGAGCACATCAAAGCGGGCG...........................................	28	7	0.14	1	0	1	0	0	0
....................................................................................................................................................AGCACATCAAAGCGGGCGTCCCT......................................	23	7	0.14	1	0	1	0	0	0
....................................................................................................................................................AGCACATCAAAGCGGGCGTCCC.......................................	22	7	0.14	1	0	1	0	0	0
...........................................................................................................................................CAAGAATAGAGCACATCAAAGCGG..............................................	24	7	0.14	1	0	1	0	0	0
...................................................................................................................................................GAGCACATCAAAGCGGGCGTCCCTA.....................................	25	7	0.14	1	0	0	1	0	0
...........................................................................................................................................CAAGAATAGAGCACATCAAAGCGGGCG...........................................	27	7	0.14	1	0	1	0	0	0
...................................................................................................................................................GAGCACATCAAAGCGGGCGT..........................................	20	7	0.14	1	0	1	0	0	0
......CCTTTGATCGAGTCTGGCATGATGGG.................................................................................................................................................................................	26	8	0.13	1	0	1	0	0	0
.......................................................................................................GACGGTTTTACGTTAGGTGT---GAGA...............................................................................	24	8	0.13	1	0	1	0	0	0
........TTTGATCGAGTCTGGCATGATGGGC................................................................................................................................................................................	25	8	0.13	1	0	0	0	1	0
.......CTTTGATCGAGTCTGGCATGA.....................................................................................................................................................................................	21	8	0.13	1	0	1	0	0	0
...........................................................................................................................................CAAGAATAGAGCACATCAAAG.................................................	21	8	0.13	1	0	0	0	1	0
...................................................................................................................................................................GCGTCCCTCAGGGCAGTGTAC.........................	21	8	0.13	1	0	1	0	0	0
.............................................................................................................TTTACGTTAGGTGT---GAGAGTTC...........................................................................	22	8	0.13	1	0	1	0	0	0
...........................................................................................................................................CAAGAATAGAGCACATCAAAGC................................................	22	8	0.13	1	0	0	0	1	0
.......CTTTGATCGAGTCTGGCATGATGGG.................................................................................................................................................................................	25	8	0.13	1	0	1	0	0	0
......................................................................................................................................................................TCCCTCAGGGCAGTGTACTGGGCCCTA................	27	8	0.13	1	0	1	0	0	0
......CCTTTGATCGAGTCTGGCATGATGG..................................................................................................................................................................................	25	8	0.13	1	0	1	0	0	0
...AGGCCTTTGATCGAGTCTGGC.........................................................................................................................................................................................	21	8	0.13	1	0	0	0	1	0
.....GCCTTTGATCGAGTCTGGCATGATGGGC................................................................................................................................................................................	28	8	0.13	1	0	1	0	0	0
.....GCCTTTGATCGAGTCTGGCATGATGG..................................................................................................................................................................................	26	8	0.13	1	0	1	0	0	0
..........TGATCGAGTCTGGCATGATGGGCT...............................................................................................................................................................................	24	8	0.13	1	0	1	0	0	0
.........................................................................................................CGGTTTTACGTTAGGTGT---GAGAGT.............................................................................	24	8	0.13	1	0	1	0	0	0
......................................................................................................................................................................TCCCTCAGGGCAGTGTACTGGG.....................	22	8	0.13	1	0	1	0	0	0
.......CTTTGATCGAGTCTGGCATGAT....................................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0
.................................................................................................................CGTTAGGTGT---GAGAGTTC...........................................................................	18	8	0.13	1	0	1	0	0	0
.......................................................................................................GACGGTTTTACGTTAGGTGT---GAGAG..............................................................................	25	8	0.13	1	0	1	0	0	0
...............GAGTCTGGCATGATGGGCTCCTGCACAA......................................................................................................................................................................	28	9	0.11	1	0	1	0	0	0
...................CTGGCATGATGGGCTCCTGCACA.......................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0
...................CTGGCATGATGGGCTCCTGCAC........................................................................................................................................................................	22	9	0.11	1	0	1	0	0	0
...............GAGTCTGGCATGATGGGCTCCTGCACA.......................................................................................................................................................................	27	9	0.11	1	0	1	0	0	0
...................CTGGCATGATGGGCTCCTGCACAAAA....................................................................................................................................................................	26	9	0.11	1	0	1	0	0	0
..................TCTGGCATGATGGGCTCCTGCACAAAA....................................................................................................................................................................	27	9	0.11	1	0	1	0	0	0
..................TCTGGCATGATGGGCTCCTGCACAA......................................................................................................................................................................	25	9	0.11	1	0	1	0	0	0
..................TCTGGCATGATGGGCTCC.............................................................................................................................................................................	18	12	0.08	1	1	0	0	0	0
............ATCGAGTCTGGCATGATGGGCC...............................................................................................................................................................................	22	12	0.08	1	1	0	0	0	0
.............TCGAGTCTGGCATGATGGGCTCCT............................................................................................................................................................................	24	12	0.08	1	0	1	0	0	0
.............TCGAGTCTGGCATGATGGGCTC..............................................................................................................................................................................	22	12	0.08	1	0	1	0	0	0
.................GTCTGGCATGATGGGCTCCTG...........................................................................................................................................................................	21	12	0.08	1	0	1	0	0	0
................AGTCTGGCATGATGGGCTCCTG...........................................................................................................................................................................	22	12	0.08	1	0	1	0	0	0

dp5

AGGAAGCTTTTGATAGAGTCTGGCATCAGGGTCTACTCTGCAAAGTTAAAACGATAATACCTGACAA-TTTATACATTCTACTCACCAGCTATCTCTCAGACAGAAGCTTCAAAGTCGTCTGCTGCAACAACATCACCTCAAGCCTAAAGCACATAACCGCTGGAGTGCCGCAAGGAAGCGTACTTGGCCCAGTGCTCTACAATCTCTA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
......................................................TAATACCTGACAA-TTTATACATTC..................................................................................................................................	24	1	145.00	145	0	144	0	0	1	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACATAACCGC................................................	28	2	59.00	118	0	107	9	1	0	1	0	0	0	0
......................................................TAATACCTGACAA-TTTATACATTCTAC...............................................................................................................................	27	1	34.00	34	0	33	1	0	0	0	0	0	0	0
..........................................................................................TATCTCTCAGACAGAAGCTTCAAAG..............................................................................................	25	2	29.00	58	0	50	0	0	1	0	7	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTGGCC...................	24	3	22.33	67	0	51	5	1	4	0	4	2	0	0
......................................................TAATACCTGACAA-TTTATACATT...................................................................................................................................	23	1	22.00	22	0	22	0	0	0	0	0	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTGGCCC..................	25	3	17.67	53	0	49	0	0	1	0	3	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTGG.....................	22	3	16.67	50	0	45	0	0	2	0	3	0	0	0
........................................................................................................................TGCTGCAACAACATCACCTCAAGCC................................................................	25	1	16.00	16	0	16	0	0	0	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACATAACCG.................................................	27	2	14.50	29	0	29	0	0	0	0	0	0	0	0
..........................................................................................TATCTCTCAGACAGAAGCTTCAAAGT.............................................................................................	26	2	13.50	27	0	22	1	1	0	0	3	0	0	0
........................................................................................................................TGCTGCAACAACATCACCTCAAGCCT...............................................................	26	1	13.00	13	0	12	1	0	0	0	0	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTGGC....................	23	3	12.67	38	0	35	1	0	2	0	0	0	0	0
......................................................................................................................................CACCTCAAGCCTAAAGCACATAACCGC................................................	27	2	11.50	23	0	22	1	0	0	0	0	0	0	0
................................................................................................TCAGACAGAAGCTTCAAAGTCGTC.........................................................................................	24	2	11.50	23	0	20	3	0	0	0	0	0	0	0
.......................................................AATACCTGACAA-TTTATACATTC..................................................................................................................................	23	1	10.00	10	0	10	0	0	0	0	0	0	0	0
......................................................................................................................TCTGCTGCAACAACATCACCTCAAGCC................................................................	27	1	10.00	10	0	10	0	0	0	0	0	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTGGCCCA.................	26	3	8.67	26	0	25	1	0	0	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACATAACC..................................................	26	2	8.50	17	0	13	4	0	0	0	0	0	0	0
...............................................................................TACTCACCAGCTATCTCTCAGACA..........................................................................................................	24	2	8.50	17	0	17	0	0	0	0	0	0	0	0
............................................................................................TCTCTCAGACAGAAGCTTCAAAGTCG...........................................................................................	26	2	8.50	17	0	17	0	0	0	0	0	0	0	0
...........................................................................................................................................CAAGCCTAAAGCACATAACCGCTGGAG...........................................	27	2	7.00	14	0	11	0	0	0	0	0	3	0	0
............................................................................................TCTCTCAGACAGAAGCTTCAAAGT.............................................................................................	24	2	6.50	13	0	11	0	0	1	0	1	0	0	0
............................................................................................TCTCTCAGACAGAAGCTTCAAAGTCGTC.........................................................................................	28	2	6.50	13	0	12	0	0	0	0	1	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACATAAC...................................................	25	2	6.00	12	0	11	1	0	0	0	0	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTGGCCCAG................	27	3	5.67	17	0	16	0	0	0	0	1	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTG......................	21	3	5.33	16	0	12	0	0	1	0	1	2	0	0
..........................................................................................TATCTCTCAGACAGAAGCTTCAAAGTCG...........................................................................................	28	2	5.00	10	0	9	0	0	0	0	1	0	0	0
............................................................................TTCTACTCACCAGCTATCTCTCAGACA..........................................................................................................	27	1	5.00	5	0	4	0	0	0	0	0	1	0	0
................................................................................................TCAGACAGAAGCTTCAAAGTCGTCT........................................................................................	25	2	4.50	9	0	9	0	0	0	0	0	0	0	0
......................................................................................................................TCTGCTGCAACAACATCACCTCAAGCCT...............................................................	28	1	4.00	4	0	3	0	0	0	0	1	0	0	0
......................................................TAATACCTGACAA-TTTATACATTCTA................................................................................................................................	26	1	4.00	4	0	4	0	0	0	0	0	0	0	0
...........................................................................ATTCTACTCACCAGCTATCTCTCAGACA..........................................................................................................	28	1	4.00	4	0	1	0	0	0	0	0	3	0	0
......................................................TAATACCTGACAA-TTTATACATTCTACT..............................................................................................................................	28	1	4.00	4	0	3	1	0	0	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACATAACCGCT...............................................	29	2	3.50	7	0	7	0	0	0	0	0	0	0	0
...........................................................................................ATCTCTCAGACAGAAGCTTCAAAG..............................................................................................	24	2	3.50	7	0	7	0	0	0	0	0	0	0	0
..............................................................................................TCTCAGACAGAAGCTTCAAAGTCGTC.........................................................................................	26	2	3.50	7	0	6	1	0	0	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACATA.....................................................	23	2	3.50	7	0	7	0	0	0	0	0	0	0	0
..........................................................................................................................................................TAACCGCTGGAGTGCCGCAAGGAAGC.............................	26	3	3.33	10	0	9	1	0	0	0	0	0	0	0
......................................................TAATACCTGACAA-TTTATACATTCT.................................................................................................................................	25	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................TCTGCTGCAACAACATCACCTCAAGC.................................................................	26	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................TGCAACAACATCACCTCAAGCCTAAAG...........................................................	27	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................TCAAAGTCGTCTGCTGCAACAACA............................................................................	24	1	3.00	3	0	2	0	0	0	0	0	1	0	0
........TTTGATAGAGTCTGGCATCAGGG..................................................................................................................................................................................	23	1	3.00	3	0	2	0	0	0	0	0	1	0	0
..........TGATAGAGTCTGGCATCAGG...................................................................................................................................................................................	20	1	3.00	3	0	2	1	0	0	0	0	0	0	0
....................TGGCATCAGGGTCTACTCTGCAAAGT...................................................................................................................................................................	26	2	3.00	6	0	3	0	0	0	0	0	3	0	0
..........................................................................................................................................................TAACCGCTGGAGTGCCGCAAGGAAG..............................	25	3	2.67	8	0	7	0	0	0	0	1	0	0	0
...................................................................................................................................CATCACCTCAAGCCTAAAGCAC........................................................	22	2	2.50	5	0	5	0	0	0	0	0	0	0	0
......................................................................................................................................CACCTCAAGCCTAAAGCACATAACCG.................................................	26	2	2.50	5	0	3	0	0	0	0	0	2	0	0
..............................................................................................TCTCAGACAGAAGCTTCAAAGTCGT..........................................................................................	25	2	2.50	5	0	1	0	0	0	0	4	0	0	0
............................................................................................................................................AAGCCTAAAGCACATAACCGCTGGAG...........................................	26	2	2.50	5	0	5	0	0	0	0	0	0	0	0
..........................................................................................................................................................TAACCGCTGGAGTGCCGCAAGGA................................	23	3	2.33	7	0	7	0	0	0	0	0	0	0	0
............................................................................TTCTACTCACCAGCTATCTCTCAGAC...........................................................................................................	26	1	2.00	2	0	1	0	0	0	0	0	1	0	0
..............................................................................................TCTCAGACAGAAGCTTCAA................................................................................................	19	2	2.00	4	0	1	0	0	0	0	0	3	0	0
.............TAGAGTCTGGCATCAGGGTC................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
....................................................GATAATACCTGACAA-TTTATACATTC..................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................TCACCAGCTATCTCTCAGACAGAAGCT....................................................................................................	27	2	2.00	4	0	3	0	1	0	0	0	0	0	0
.......................................................AATACCTGACAA-TTTATACATTCTAC...............................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................CACCTCAAGCCTAAAGCACATAAC...................................................	24	2	2.00	4	0	3	1	0	0	0	0	0	0	0
...............................................................................................CTCAGACAGAAGCTTCAAAGTCGTC.........................................................................................	25	2	2.00	4	0	4	0	0	0	0	0	0	0	0
................................................................................................TCAGACAGAAGCTTCAAAGTCGT..........................................................................................	23	2	2.00	4	0	3	0	0	0	0	1	0	0	0
........................................................................................................................................................CATAACCGCTGGAGTGCCGCAAGGA................................	25	3	2.00	6	0	6	0	0	0	0	0	0	0	0
......................................TGCAAAGTTAAAACGATAATACCTGACA...............................................................................................................................................	28	1	2.00	2	0	1	0	0	0	0	0	1	0	0
.......................................................AATACCTGACAA-TTTATACATT...................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
............................................................CTGACAA-TTTATACATTCTACTCACC..........................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	2	0	0
................................................................................ACTCACCAGCTATCTCTCAGACA..........................................................................................................	23	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................CTATCTCTCAGACAGAAGCTTCAAAG..............................................................................................	26	2	2.00	4	0	4	0	0	0	0	0	0	0	0
..........TGATAGAGTCTGGCATCAGGGT.................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................AATACCTGACAA-TTTATACATTCTA................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................TTCTACTCACCAGCTATCTCTCAGACAGAG.......................................................................................................	30	1	2.00	2	0	0	0	0	0	0	0	2	0	0
................................................................................................................................CAACATCACCTCAAGCCTAAAGCACA.......................................................	26	2	2.00	4	0	4	0	0	0	0	0	0	0	0
........................................................................................................................TGCTGCAACAACATCACCTCAA...................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....GCTTTTGATAGAGTCTGGCATCAGGG..................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................GCCGCAAGGAAGCGTACTTGG.....................	21	3	1.67	5	0	5	0	0	0	0	0	0	0	0
..........................................................................................................................................................TAACCGCTGGAGTGCCGCAAGG.................................	22	3	1.67	5	0	5	0	0	0	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCAC........................................................	20	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..................................................................................TCACCAGCTATCTCTCAGACAGAAG......................................................................................................	25	2	1.50	3	0	2	1	0	0	0	0	0	0	0
............................................................................................TCTCTCAGACAGAAGCTTCAAAG..............................................................................................	23	2	1.50	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................ATCTCTCAGACAGAAGCTTCAAAGT.............................................................................................	25	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACATAG....................................................	24	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..................................................................................TCACCAGCTATCTCTCAGACAGA........................................................................................................	23	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................TATCTCTCAGACAGAAGCTTCAAA...............................................................................................	24	2	1.50	3	0	3	0	0	0	0	0	0	0	0
................................................................................................TCAGACAGAAGCTTCAAAGT.............................................................................................	20	2	1.50	3	0	1	0	0	0	0	2	0	0	0
..................................................................................TCACCAGCTATCTCTCAGACA..........................................................................................................	21	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................................TAAAGCACATAACCGCTGGAGTGCCG......................................	26	2	1.50	3	0	3	0	0	0	0	0	0	0	0
...............................................................................TACTCACCAGCTATCTCTCAGA............................................................................................................	22	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................TCACCTCAAGCCTAAAGCACA.......................................................	21	2	1.50	3	0	2	1	0	0	0	0	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTTGGT....................	23	3	1.33	4	0	4	0	0	0	0	0	0	0	0
......................................................................................................................................................................TGCCGCAAGGAAGCGTACTT.......................	20	3	1.33	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................AACATCACCTCAAGCCTAAAGCACA.......................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................TTTATACATTCTACTCACCAGCTATC...................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....GCTTTTGATAGAGTCTGGCATCAGG...................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................TCTGCTGCAACAACATCACCTCAAG..................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................TGCTGCAACAACATCACCTCAAGC.................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTGCTGCAACAACATCACCTCAA...................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................CTGCTGCAACAACATCACCTCAAGCC................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................TGGCATCAGGGTCTACTCTGCAAA.....................................................................................................................................................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................AAAGTCGTCTGCTGCAACAACATC..........................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................ATAATACCTGACAA-TTTATACATTC..................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................CTATCTCTCAGACAGAAGCTTCAAAGT.............................................................................................	27	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................ATCACCTCAAGCCTAAAGCACATAACCG.................................................	28	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............TAGAGTCTGGCATCAGGGT.................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................CTGCTGCAACAACATCACCTCAAGCCT...............................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................................GCAACAACATCACCTCAAGCCT...............................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........TGATAGAGTCTGGCATCAGGGTC................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........TTGATAGAGTCTGGCATCAGGGA.................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................GCTGCAACAACATCACCTCAAGC.................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................TACCTGACAA-TTTATACATTCTACT..............................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................GCTGCAACAACATCACCTCAAGCCT...............................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................................TAATACCTGACAA-TTTATACATTCTACTC.............................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................TGCTGCAACAACATCACCTCAAG..................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................TAAAACGATAATACCTGACAA-TTTAT........................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
......CTTTTGATAGAGTCTGGCATCAGGG..................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................CATTCTACTCACCAGCTATCTCTC...............................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................CTGGCATCAGGGTCTACTC...........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........TTTGATAGAGTCTGGCATCAGGGT.................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................TGCAACAACATCACCTCAAGCCTAAAGCA.........................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TACTTGGCCCAGTGCTCTACAATCTC..	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................ATAATACCTGACAA-TTTATACATTCTAC...............................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........TGATAGAGTCTGGCATCAGGA..................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CACCTCAAGCCTAAAGCACATAACC..................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................CAAAGTCGTCTGCTGCAACAAC.............................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................GAAGCTTCAAAGTCGTCTGCTGC...................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................CAACAACATCACCTCAAGCCTAAAGCACA.......................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................TCTGCTGCAACAACATCACC.......................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................AACAACATCACCTCAAGCCTAAAGCACA.......................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................AA-TTTATACATTCTACTCACC..........................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................TGCAACAACATCACCTCAAGCCTAAA............................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................CAACAACATCACCTCAAGCCTAAAGC..........................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................TCTCAGACAGAAGCTTCAAAGTCG...........................................................................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................GCTGCAACAACATCACCTCAAGCC................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........TGATAGAGTCTGGCATCAGGG..................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................CGTCTGCTGCAACAACATCACCTCAAGCC................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................TATCTCTCAGACAGAAGCTTCAAAGA.............................................................................................	26	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................TCTCTCAGACAGAAGCTTCAAAGTCGT..........................................................................................	27	2	1.00	2	0	1	0	0	0	0	1	0	0	0
...................................................................................................................................CATCACCTCAAGCCTAAAGCACATA.....................................................	25	2	1.00	2	0	1	1	0	0	0	0	0	0	0
.................................................................................................................................................TAAAGCACATAACCGCTGGAGTG.........................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............ATAGAGTCTGGCATCAGGGTC................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................TGCAACAACATCACCTCAAGCCTAAAGC..........................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........TTTGATAGAGTCTGGCATCAG....................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................TACATTCTACTCACCAGCTATCTCTC...............................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................AAAGTCGTCTGCTGCAACAACA............................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................TATCTCTCAGACAGAAGCTTCAAAGTC............................................................................................	27	2	1.00	2	0	1	0	0	0	0	1	0	0	0
......................................................TAATACCTGACAA-TTTATACA.....................................................................................................................................	21	2	1.00	2	0	1	0	0	0	0	0	1	0	0
.......................................................................................................GAAGCTTCAAAGTCGTCTGCTGT...................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................CAACATCACCTCAAGCCTAAAGCA.........................................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
......................................................TAATACCTGACAA-TTTATACATTCTACTA.............................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................GCAACAACATCACCTCAAGCCTAAAGCA.........................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........TGATAGAGTCTGGCATCAGGGTCT...............................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......TTTTGATAGAGTCTGGCATCAGGG..................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................GCTGCAACAACATCACCTCAAG..................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................CAAAGTCGTCTGCTGCAACAACA............................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................CGATAATACCTGACAA-TTTATACAT....................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................................................................................AGAAGCTTCAAAGTCGTCTGCTGCAA.................................................................................	26	2	1.00	2	0	1	0	0	0	0	0	1	0	0
.................................................................................................................................................TAAAGCACATAACCGCTGGAGTGCC.......................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................TGCAACAACATCACCTCAAGCCTAA.............................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......TTTTGATAGAGTCTGGCATCAGG...................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................AACATCACCTCAAGCCTAAAGCA.........................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............TAGAGTCTGGCATCAGGG..................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........TTTGATAGAGTCTGGCATCAGG...................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................TAATACCTGACAA-TTTATACAT....................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................TACATTCTACTCACCAGCTATC...................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0

droPer2

AACAAGCGTTTGACCGGGTGTGGCTTGATGGCCTCCTCTTTAAGCTGAGAAACATATTGCCCCCGCA-GCTATTCCAGCTGGTGAGTAGCTTTCTAATGGACAGAAGTTTTAGTGTTGTTGTA---AATGGAGCAAAATCATCGAAGCGCCCAATCTGTGCAGGCGTCCCTCAAGGCAGTGTTCTTGGACCAACGTTATATACCCTATA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...................................................................................................................TTGTTGTA---AATGGAGCAAAATCATCG.................................................................	26	6	0.33	2	0	2	0	0	0	0
...................................................................................................................TTGTTGTA---AATGGAGCAAAATCATC..................................................................	25	7	0.29	2	0	2	0	0	0	0
...........................................................................................................TTTTAGTGTTGTTGTA---AATGG..............................................................................	21	9	0.22	2	0	0	0	0	0	2
......................................................................................................................................................CCAATCTGTGCAGGCGTCCC.......................................	20	9	0.22	2	0	0	0	0	0	2
.................................................................................................................................................AGCGCCCAATCTGTGCAGGC............................................	20	5	0.20	1	0	0	0	0	0	1
.........................TGATGGCCTCCTCTTTAAGCTGAGAA..............................................................................................................................................................	26	11	0.18	2	0	2	0	0	0	0
..............................................................................................TAATGGACAGAAGTTTTAGT...............................................................................................	20	6	0.17	1	0	0	0	0	0	1
.............................................................................................................TTAGTGTTGTTGTA---AATGGAGC...........................................................................	22	6	0.17	1	0	1	0	0	0	0
....................................................................................................................TGTTGTA---AATGGAGCAAAATCATCG.................................................................	25	6	0.17	1	0	1	0	0	0	0
.............................................TGAGAAACATATTGCCCCCGCA-GCTA.........................................................................................................................................	26	6	0.17	1	0	1	0	0	0	0
....................................TCTTTAAGCTGAGAAACATATTGCCC...................................................................................................................................................	26	6	0.17	1	0	1	0	0	0	0
..............................................................................................TAATGGACAGAAGTTTTAGTG..............................................................................................	21	6	0.17	1	0	0	0	0	0	1
.............................................................................................................TTAGTGTTGTTGTA---AATGGAGCAA.........................................................................	24	6	0.17	1	0	0	1	0	0	0
..........................................................................................TTTCTAATGGACAGAAGTTTT..................................................................................................	21	6	0.17	1	0	0	0	0	0	1
..................................................AACATATTGCCCCCGCA-GCTATTCCAGC..................................................................................................................................	28	6	0.17	1	0	1	0	0	0	0
..................................................................................................................GTTGTTGTA---AATGGAGCAAAATCA....................................................................	24	7	0.14	1	0	1	0	0	0	0
...................................................................................GAGTAGCTTTCTAATGGACAGAAG......................................................................................................	24	8	0.13	1	0	1	0	0	0	0
..................................................................................TGAGTAGCTTTCTAATGGACAG.........................................................................................................	22	8	0.13	1	0	1	0	0	0	0
..................................................................................TGAGTAGCTTTCTAATGGACAGAAG......................................................................................................	25	8	0.13	1	0	1	0	0	0	0
............................................................................................................TTTAGTGTTGTTGTA---AATG...............................................................................	19	9	0.11	1	0	0	0	0	0	1
..................................................................................................GGACAGAAGTTTTAGTGTTGT..........................................................................................	21	9	0.11	1	0	0	0	0	0	1
......................................................................................................................................................................................TCTTGGACCAACGTTATATACCCT...	24	10	0.10	1	1	0	0	0	0	0
........................................................................................................................................................................................TTGGACCAACGTTATATACCCTATA	25	10	0.10	1	0	1	0	0	0	0
.........................................................................................................................................................................................TGGACCAACGTTATATACCCTATA	24	10	0.10	1	0	1	0	0	0	0
......................................................................................................................................................................................TCTTGGACCAACGTTATATACCCTATA	27	10	0.10	1	0	1	0	0	0	0
........................................TAAGCTGAGAAACATATTGCC....................................................................................................................................................	21	11	0.09	1	0	1	0	0	0	0
......................................TTTAAGCTGAGAAACATATTG......................................................................................................................................................	21	11	0.09	1	0	0	0	1	0	0
.................................TCCTCTTTAAGCTGAGAAACATAT........................................................................................................................................................	24	11	0.09	1	0	1	0	0	0	0

droAna3

AGCAGGCTTTCGACCGAGTCTGGCATCCCGGTCTATTATACAAATTAAAGACTGGCCTACCCCGACC-ATACTTCCAGTTCCTTAAATCTTTCTTGGAAGACCGTAAATTTTCGGTAAGATGC---GGCGATGCCATCTCCGGTCTACGAGAAGTTCACGCTGGTGTCCCCCAAGGCAGCGTTCTTGGCCCGTTGATGTACAACGCTTA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................................................................................................................TGCCATCTCCGGTCTACGAGAAGT......................................................	24	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................GTCTACGAGAAGTTCACGCTGGTGTC.........................................	26	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................CGGTCTACGAGAAGTTCACGCTGG.............................................	24	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................CGGTCTACGAGAAGTTCACGCTG..............................................	23	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................TCCGGTCTACGAGAAGTTCACGCTGGTG...........................................	28	1	1.00	1	1	0	0	0	0	0
.....................................ATACAAATTAAAGACTGGCCTACCC...................................................................................................................................................	25	4	0.75	3	1	2	0	0	0	0
.....................................ATACAAATTAAAGACTGGCCTACCCC..................................................................................................................................................	26	4	0.50	2	2	0	0	0	0	0
.......TTTCGACCGAGTCTGGCATCCCGGC.................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0
....................................................TGGCCTACCCCGACC-ATACTTCCAGTTCC...............................................................................................................................	29	4	0.50	2	2	0	0	0	0	0
.....................................ATACAAATTAAAGACTGGCCT.......................................................................................................................................................	21	4	0.50	2	1	1	0	0	0	0
................................CTATTATACAAATTAAAGACTGGCC........................................................................................................................................................	25	4	0.50	2	0	2	0	0	0	0
....................................TATACAAATTAAAGACTGGCCTACCCC..................................................................................................................................................	27	4	0.25	1	0	1	0	0	0	0
.....................................ATACAAATTAAAGACTGGCCTACC....................................................................................................................................................	24	4	0.25	1	0	1	0	0	0	0
.........................................AAATTAAAGACTGGCCTACCCCGAC...............................................................................................................................................	25	4	0.25	1	1	0	0	0	0	0
....................................................TGGCCTACCCCGACC-ATACTTCCAGTTC................................................................................................................................	28	4	0.25	1	1	0	0	0	0	0
.........................................AAATTAAAGACTGGCCTACCC...................................................................................................................................................	21	4	0.25	1	0	1	0	0	0	0
........................................................................................................................................................................CCCCAAGGCAGCGTTCTTGGCCCGTT...............	26	5	0.20	1	1	0	0	0	0	0
...................................................................................................................TAAGATGC---GGCGATGCCATCTCCGGT.................................................................	26	5	0.20	1	1	0	0	0	0	0
......................................................................................................................................................................TCCCCCAAGGCAGCGTTCTTGGCCCG.................	26	5	0.20	1	1	0	0	0	0	0
..........................................................................................................................................................TTCACGCTGGTGTCCCCCAAGGCAGC.............................	26	5	0.20	1	1	0	0	0	0	0
......................................................................................................................................................................TCCCCCAAGGCAGCGTTCTTGGCC...................	24	5	0.20	1	1	0	0	0	0	0
..............................................................................................................TTCGGTAAGATGC---GGCGATGCCATCTC.....................................................................	27	5	0.20	1	1	0	0	0	0	0
..............................................................................................................TTCGGTAAGATGC---GGCGATGCCAT........................................................................	24	5	0.20	1	1	0	0	0	0	0
............................................................................................................TTTTCGGTAAGATGC---GGCGATGCCA.........................................................................	25	5	0.20	1	1	0	0	0	0	0
......................................................................................................................................................................TCCCCCAAGGCAGCGTTCTTGGCCCGT................	27	5	0.20	1	1	0	0	0	0	0
.........TCGACCGAGTCTGGCATCCCGGT.................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0
.............................................................................................................TTTCGGTAAGATGC---GGCGATGCCATC.......................................................................	26	5	0.20	1	0	1	0	0	0	0
...................................................................................................................TAAGATGC---GGCGATGCCATCTCC....................................................................	23	5	0.20	1	0	0	0	0	1	0
....................................................................................................................................................GAGAAGTTCACGCTGGTGTCCCCCAA...................................	26	5	0.20	1	1	0	0	0	0	0
..............................................................................................................TTCGGTAAGATGC---GGCGATGCCATCT......................................................................	26	5	0.20	1	1	0	0	0	0	0
.....................................................................................AATCTTTCTTGGAAGACCGTAA......................................................................................................	22	5	0.20	1	1	0	0	0	0	0
................................................................................................................CGGTAAGATGC---GGCGATG............................................................................	18	5	0.20	1	1	0	0	0	0	0
.......................................................................................................................................................AAGTTCACGCTGGTGTCCCCCAAGGC................................	26	5	0.20	1	0	1	0	0	0	0
......................................................................................................................................................................................TCTTGGCCCGTTGATGTACAACGC...	24	5	0.20	1	1	0	0	0	0	0
...........................................................................................................................................................TCACGCTGGTGTCCCCCAAGG.................................	21	5	0.20	1	1	0	0	0	0	0
...................................................................................................................TAAGATGC---GGCGATGCCATCTCCGG..................................................................	25	5	0.20	1	1	0	0	0	0	0
................................................................ACC-ATACTTCCAGTTCCTTAAATCT.......................................................................................................................	25	5	0.20	1	1	0	0	0	0	0
.......................................................................................................................................................................CCCCCAAGGCAGCGTTCTTGGCCC..................	24	5	0.20	1	0	1	0	0	0	0
.........................................................TACCCCGACC-ATACTTCCAGTTCCTTAAA..........................................................................................................................	29	5	0.20	1	1	0	0	0	0	0
............................................................................AGTTCCTTAAATCTTTCTTGGAAGACC..........................................................................................................	27	5	0.20	1	0	1	0	0	0	0
................................................................................CCTTAAATCTTTCTTGGAAGACCGT........................................................................................................	25	5	0.20	1	0	1	0	0	0	0
.......................................................................................................................................................................CCCCCAAGGCAGCGTTCTTGGCCCGT................	26	5	0.20	1	1	0	0	0	0	0

droBip1

AGCAAGCGTTCGACCGAGTCTGGCATCCCGGTCTTCTATATAAATTAAAGATTGGCCTACCCCGACC-ATACTTCCAGTTCCTAAA---GTTCTTGGAAGACCGTAAATTTGCGGTAAGATGC---GGCGAGGCAATCTCCGGTCTAAGAGAAGCTCACGCTGGTGTACCCCATGGCAGCGTTCTTGGCCCGTTGATCTACAACGCTTA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGCAGGCTTTCGACAGGGTCTGGCACGAGGGGCTTCTGTCCAAGATCAAAGAGCTCCTGCCACCACA-GCTCTTTGAGATCATCTGCAGCTACCTCAAGGATAGGAGCTTCCAGGTGGTGCAG---GATGGAGTTGCCTCCTCCACCAGGAATATCAGAGCTGGTGTCCCTCAAGGAAGCGTATTAGGACCCACGCTCTACAATCTATT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AACAGGCGTTCGACAGGGTCTGGCACACAGGCCTTTTGTACAAATTAAAAAAGGTACTCCCTGCTCC-GTACTACCTTTTTCTCAAGTCGTACCTGCACAAAAGGAGTTTCTACGTGCGATGT---GGAGACGAAGAATCCGACCTTATGGAAATCAATGCAGGAGTACCCCAAGGCAGTGTACTGGGCCCCATCCTCTACATCATTTA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AACAAGCCTTTGACAAGGTCTGGCACGAGGGCCTCCTTTATAAAATCAAGGAACTCCTTCCTGCACC-CTACTTCGCCATCCTGAAGTCATTTATTGCCGATAGAACCTTCGAAGTAGCGGTA---AGGGAAGCATGATCCAGTTTGGCATACATACATGCAGGAGTGCCCCAAGGAAG---ACTTGGTCCGTTCCTATACACCATGTA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGCAAGCGTTTGATAGTGTTTGGCACAATGGATTACTCTATAAGATAATGAAATGGCTACCTGCTCC-CTACTAGTTACTACTGAGATCCTATTTGTCTAAGAAATGCT-------G---------AGATATGATACGTCAACAATACTTCTCATAAACGTAGGCGTTCCTCAAGGGAGTGTATTGGGACCATTCCTTTACACTTTATA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CACAGGCTTTCGATCGAGTCTGGCTTGATGGCCTTATGCAAAAAT-CAGAACTATTCTGCCAGAAAA-CACTCACAGTATACTTGAATCATACCTTTACAACATAGAATTCGCCGTGTGATGC---AAAACTACAACATCCGCTGATTACACTATAAAGGCTGGAGGTCGCGAAAGTCGCTCCCTTGGTCCAACTCTATTTCTCTTTCA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGCAAGCCTTCGATCGAGTCAGGCACTGTGGCTTGCTCTATAAGCTGAAACCCATTCTTCCCCCGAC-ATACTTTAATCTCCTTCGCTCATTTCTAATTGCTAGAACCTTCCAGGTGCATGTT---CGAGGATCCAAGTCTGCCTCAAGGCCTATTCTAGCTGGAGTCCCTCAAGGAAGTGTGCTGGGTCCTGTCTTGTATACAATATT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AACAAGCGTTTGATCGAGTCTGGCACAAAGGTTTATTGTACAAAATAAAAAAATTTCTACCTTCTCC-GTATTACTTAATAATCAAATCATATCTTAATAAAAGATGCTTTTACGAGCAGCAG---AAAAACGATTCATCAACGTTACTTCTTATTAATGCAGGCGTCCCACAAGGAAGCGTATTGGGGCCAATCCTCTATACTTTATA	Size	Hit Count	Total Norm	Total
No Reads

dm3

AGCAGGCGTTCGACAGAGTGTGGCATCCTGGACTCCTCTACAAACTCAAGTCCCACCTTCCCAGTTC-CCACTATGCCCTACTGAAATCGTATACTGAAGGAAGAGAGTTCCAAGTGCGATGC---GGTTCCTCAACAAGCACGACAAGGCCTATACGAGCCAGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTGTT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........................................................................................CGTATACTGAAGGAAGAGAGTTCC.................................................................................................	24	20	76.10	1522	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	38	0	0	0	0	0	0	0	0	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	1	0	0	0	0	0	281	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	241	0	0	54	0	0	480	0	321	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CGTATACTGAAGGAAGAGAGTTC..................................................................................................	23	20	72.70	1454	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	44	0	28	0	56	0	63	0	0	0	0	0	26	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	14	0	0	0	518	0	0	0	0	0	0	0	0	329	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	305	0	0	0	0	0	0
...................................................................................................................TGCGATGC---GGTTCCTCAACAAGCACGA................................................................	27	19	58.53	1112	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	2	1	3	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	0	1	5	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	11	0	12	0	10	11	0	7	0	13	0	0	3	0	0	0	4	2	2	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	0	0	0	0	0	0	1	0	0	0	0	0	2	1	2	0	0	0	2	2	15	0	0	0	45	0	1	4	242	2	112	11	168	102	236	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	7	15	2	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0
........................................................................................CGTATACTGAAGGAAGAGAGTTCCA................................................................................................	25	20	49.35	987	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	86	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	342	0	0	187	0	0	0	55	0	0	62	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	10	0	0	116	0	0	0	0	0	0	3	0	0	0	0	64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TACAAACTCAAGTCCCACCTTCCC...................................................................................................................................................	24	20	41.10	822	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0	1	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	574	70	144	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TGCGATGC---GGTTCCTCAACAAGCACG.................................................................	26	19	21.21	403	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	2	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	6	0	0	0	0	1	3	10	3	7	3	0	1	2	1	0	9	15	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	6	1	0	0	6	2	0	12	6	1	0	0	0	2	0	2	0	1	2	2	7	0	0	0	0	47	0	3	3	31	0	26	2	23	25	37	2	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	3	7	0	4	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	7	5	3	0	0	0	0	0	0
............................................................................................TACTGAAGGAAGAGAGTTCCAAGTGC...........................................................................................	26	20	20.75	415	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	31	12	0	0	9	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0	0	161	89	0	0	0	18	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GTATACTGAAGGAAGAGAGTTCC.................................................................................................	23	20	12.45	249	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	17	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	40	143	0	0	0	0	0	0	0	0	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...........................................................................................ATACTGAAGGAAGAGAGTTCC.................................................................................................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATCCTGGACTCCTCTACAAACTCAAG...............................................................................................................................................................	26	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................AGTACCTCAAGGCAGCGTCC.........................	20	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TTCGACAGAGTGTGGCATCCTGGACTC..............................................................................................................................................................................	27	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CTCAACAAGCACGACAAGGCCTA.......................................................	23	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................AGTGTGGCATCCTGGACTCC.............................................................................................................................................................................	20	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TATACTGAAGGAAGAGAGTTCCAA...............................................................................................	24	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

AGCAGGCGTTCGACAGAGTGTGGCATCCTGGACTCCTCTACAAACCCGAGTCCCACCTTCCCAGTTC-ACACTATGCCATACTCAAATCGTATACTGAAGGAAGAGAGTTCCAAGTGCGATGC---GGTTCCTCAACC-----AGCACGCGAAATACGAGCCGGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTTTT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..................................................................................TCAAATCGTATACTGAAGGAAGA........................................................................................................	23	7	251.43	1760	0	3	11	6	16	0	107	143	50	67	11	0	1226	120	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGA......................................................................................................	25	7	191.86	1343	0	2	4	12	48	0	201	277	73	110	53	0	495	68	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAG.......................................................................................................	24	7	98.29	688	0	0	0	7	48	0	84	83	25	34	18	0	326	63	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAGT....................................................................................................	27	7	53.86	377	0	0	0	0	0	0	46	54	2	10	10	0	219	36	0	0	0
.......................CATCCTGGACTCCTCTACAAACCCGA................................................................................................................................................................	26	1	48.00	48	0	0	44	3	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAG.....................................................................................................	26	7	37.57	263	0	0	0	2	0	0	21	8	1	1	8	0	185	37	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGT......................................................................................................	25	7	19.86	139	0	0	0	0	0	0	3	7	2	3	2	0	98	24	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAT.......................................................................................................	24	7	17.00	119	0	0	0	0	0	0	1	2	0	1	1	0	96	18	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAG.........................................................................................................	22	7	14.14	99	0	0	0	3	16	0	17	29	6	12	2	0	13	1	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAACC-----..................................................................	26	5	12.40	62	0	0	0	10	0	0	2	2	2	0	26	0	19	1	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAA.......................................................................................................	24	7	11.43	80	0	0	0	0	0	0	0	0	1	0	0	0	64	15	0	0	0
.......................CATCCTGGACTCCTCTACAAACCC..................................................................................................................................................................	24	1	11.00	11	0	1	6	1	3	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAC.......................................................................................................	24	7	8.71	61	0	0	0	0	0	0	0	0	0	0	0	0	48	13	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATTT.....................................................................................................	26	7	8.14	57	0	0	0	0	0	0	0	0	0	0	0	0	39	18	0	0	0
.......................CATCCTGGACTCCTCTACAAACC...................................................................................................................................................................	23	1	7.00	7	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CGTATACTGAAGGAAGAGAGT....................................................................................................	21	7	6.86	48	0	0	0	0	0	48	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAT.....................................................................................................	26	7	6.71	47	0	0	0	0	0	0	0	0	0	0	0	0	36	11	0	0	0
.......................CATCCTGGACTCCTCTACAAACCCGAG...............................................................................................................................................................	27	1	6.00	6	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAA.....................................................................................................	26	7	6.00	42	0	0	0	0	0	0	1	1	2	2	0	0	32	4	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAGA....................................................................................................	27	7	5.71	40	0	0	0	0	0	0	2	4	0	0	0	0	30	4	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGTT.....................................................................................................	26	7	5.43	38	0	0	0	0	0	0	0	0	0	2	0	0	25	11	0	0	0
.........................TCCTGGACTCCTCTACAAACCCGAGT..............................................................................................................................................................	26	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TCCTGGACTCCTCTACAAACCCGAGTC.............................................................................................................................................................	27	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAA..........................................................................................................	21	7	4.86	34	0	0	0	1	16	0	2	2	1	2	3	0	4	3	0	0	0
....................TGGCATCCTGGACTCCTCTACAAAC....................................................................................................................................................................	25	9	4.78	43	0	0	0	0	0	0	11	10	13	5	0	0	4	0	0	0	0
...............................................................................................TGAAGGAAGAGAGTTCCAAGTGCGA.........................................................................................	25	7	4.43	31	0	0	0	0	0	0	3	15	8	3	2	0	0	0	0	0	0
...AGGCGTTCGACAGAGTGTGGCATCCT....................................................................................................................................................................................	26	4	4.25	17	0	0	0	0	0	0	0	0	0	1	12	0	4	0	0	0	0
.......................CATCCTGGACTCCTCTACAA......................................................................................................................................................................	20	10	4.10	41	0	0	1	0	19	19	2	0	0	0	0	0	0	0	0	0	0
.......................CATCCTGGACTCCTCTACAAACCCGG................................................................................................................................................................	26	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...AGGCGTTCGACAGAGTGTGGCATCC.....................................................................................................................................................................................	25	4	4.00	16	0	0	0	0	0	0	1	1	0	1	13	0	0	0	0	0	0
........................ATCCTGGACTCCTCTACAAACCCGAG...............................................................................................................................................................	26	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGC......................................................................................................	25	7	3.71	26	0	0	0	0	0	0	0	4	1	1	1	0	18	1	0	0	0
AGCAGGCGTTCGACAGAGTGTGGC.........................................................................................................................................................................................	24	6	3.67	22	0	0	0	0	0	0	0	1	0	0	20	0	1	0	0	0	0
............................................................................................................................................................................AAGGCAGCGTCCTTGGTCCCATCCTC...........	26	5	3.40	17	0	0	0	1	0	0	2	2	0	2	9	0	1	0	0	0	0
...AGGCGTTCGACAGAGTGTGGCAT.......................................................................................................................................................................................	23	5	3.40	17	0	0	0	0	0	0	0	1	2	0	10	0	3	1	0	0	0
...................................................................................................................TGCGATGC---GGTTCCTCAACC-----AGCAC.............................................................	25	5	3.40	17	0	0	0	3	0	0	0	0	0	0	1	0	13	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAC.....................................................................................................	26	7	3.29	23	0	0	0	0	0	0	0	0	1	0	1	0	18	3	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGACT......................................................................................................	25	7	3.14	22	0	0	0	0	0	0	0	0	0	0	0	0	14	8	0	0	0
..................................................................................TCAAATCGTATACTGAAGG............................................................................................................	19	7	3.14	22	0	0	0	0	17	0	2	1	0	1	1	0	0	0	0	0	0
..CAGGCGTTCGACAGAGTGTGGCATCC.....................................................................................................................................................................................	26	4	3.00	12	0	0	0	0	0	0	2	5	3	1	1	0	0	0	0	0	0
...AGGCGTTCGACAGAGTGTGGCATC......................................................................................................................................................................................	24	4	3.00	12	0	0	0	0	0	0	0	1	0	1	7	0	2	1	0	0	0
..................TGTGGCATCCTGGACTCCTCTACAAAC....................................................................................................................................................................	27	9	2.89	26	0	0	0	0	0	0	6	7	9	3	0	0	1	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATT......................................................................................................	25	7	2.71	19	0	0	0	0	0	0	0	0	0	0	0	0	17	2	0	0	0
..........................................................................................................................................................TACGAGCCGGAGTACCTCAAGGCAGC.............................	26	3	2.67	8	0	0	2	0	0	0	2	1	0	0	2	0	1	0	0	0	0
........................................................................................CGTATACTGAAGGAAGAGAGTTCCA................................................................................................	25	7	2.57	18	0	0	0	0	16	0	0	0	0	2	0	0	0	0	0	0	0
........................................................................................CGTATACTGAAGGAAGAGAGTTCC.................................................................................................	24	7	2.57	18	0	0	0	0	0	0	0	17	0	1	0	0	0	0	0	0	0
.........................................................................................GTATACTGAAGGAAGAGA......................................................................................................	18	7	2.57	18	0	0	0	0	0	0	0	0	0	1	17	0	0	0	0	0	0
...................................................................................................................TGCGATGC---GGTTCCTCAAC........................................................................	19	5	2.40	12	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................GTGCGATGC---GGTTCCTCA..........................................................................	18	5	2.40	12	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0
....GGCGTTCGACAGAGTGTGG..........................................................................................................................................................................................	19	7	2.29	16	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GTATACTGAAGGAAGAGAGT....................................................................................................	20	7	2.29	16	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0
.......................CATCCTGGACTCCTCTACAAA.....................................................................................................................................................................	21	9	2.22	20	0	0	0	1	19	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................GTGCGATGC---GGTTCCTCAACC-----AGCAC.............................................................	26	5	2.20	11	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAGC....................................................................................................	27	7	2.14	15	0	0	0	0	0	0	5	1	0	0	1	0	7	1	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATTA.....................................................................................................	26	7	2.00	14	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0
.........................TCCTGGACTCCTCTACAAACCCGAG...............................................................................................................................................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................TGGCATCCTGGACTCCTCTACAAACC...................................................................................................................................................................	26	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATCCTGGACTCCTCTACAAACCCGAGTC.............................................................................................................................................................	28	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TGCGATGC---GGTTCCTCAACC-----AGCACG............................................................	26	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CTGGACTCCTCTACAAACCCGAGTC.............................................................................................................................................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................CATCCTGGACTCCTCTACAAACCCG.................................................................................................................................................................	25	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................GC---GGTTCCTCAACC-----AGCACGCGA.........................................................	23	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................TTGGTCCCATCCTCTACACCCTTTT	25	1	2.00	2	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0
......CGTTCGACAGAGTGTGGCATCCTG...................................................................................................................................................................................	24	7	2.00	14	0	0	0	0	0	0	1	12	1	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGT........................................................................................................	23	7	1.86	13	0	0	0	0	0	0	1	0	1	0	0	0	8	3	0	0	0
.......................................................................................TCGTATACTGAAGGAAGAGAGTTCC.................................................................................................	25	7	1.86	13	0	0	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AAGGCAGCGTCCTTGGTCCCA................	21	5	1.80	9	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGACTT.....................................................................................................	26	7	1.71	12	0	0	0	0	0	0	0	1	0	0	0	0	10	1	0	0	0
..................TGTGGCATCCTGGACTCCTC...........................................................................................................................................................................	20	10	1.70	17	0	0	0	0	0	0	0	12	1	4	0	0	0	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAAC........................................................................	25	5	1.60	8	0	0	0	1	0	0	1	0	0	0	4	0	2	0	0	0	0
......CGTTCGACAGAGTGTGGCATCC.....................................................................................................................................................................................	22	7	1.57	11	0	0	0	0	0	0	0	7	1	3	0	0	0	0	0	0	0
...........................................................................................ATACTGAAGGAAGAGA......................................................................................................	16	7	1.57	11	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0
............................................................................................TACTGAAGGAAGAGAGTTCCAAGTGCGA.........................................................................................	28	7	1.43	10	0	0	0	0	0	0	3	4	0	2	1	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGTAA....................................................................................................	27	7	1.43	10	0	0	0	0	0	0	0	0	0	0	0	0	8	2	0	0	0
.........TCGACAGAGTGTGGCATCCTGGACTC..............................................................................................................................................................................	26	6	1.33	8	0	0	4	0	0	0	0	1	1	0	1	0	1	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGA...........................................................................................................	20	7	1.29	9	0	0	0	0	0	0	0	1	4	3	1	0	0	0	0	0	0
.......................................................................................TCGTATACTGAAGGAAGAGAGTTCCA................................................................................................	26	7	1.29	9	0	0	0	0	0	0	0	7	2	0	0	0	0	0	0	0	0
....GGCGTTCGACAGAGTGTGGCATCCTG...................................................................................................................................................................................	26	5	1.20	6	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAACC-----AGC...............................................................	29	5	1.20	6	0	0	0	1	0	0	4	0	0	0	1	0	0	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGT................................................................................	17	5	1.20	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
..................................................................................................................................................................GGAGTACCTCAAGGCAGCGTCCT........................	23	5	1.20	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
........TTCGACAGAGTGTGGCATCCTGGACTC..............................................................................................................................................................................	27	5	1.20	6	0	0	1	0	0	0	0	1	2	2	0	0	0	0	0	0	0
...............................................................................TACTCAAATCGTATACTGAAGGAAGA........................................................................................................	26	6	1.17	7	0	0	0	0	0	0	0	4	1	0	0	0	2	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAAA....................................................................................................	27	7	1.14	8	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGACTA.....................................................................................................	26	7	1.14	8	0	0	0	0	0	0	0	0	0	0	0	0	7	1	0	0	0
......CGTTCGACAGAGTGTGGCATCCT....................................................................................................................................................................................	23	7	1.14	8	0	0	0	0	0	0	1	6	1	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGATA....................................................................................................	27	7	1.00	7	0	0	0	0	0	0	0	1	0	0	0	0	5	1	0	0	0
...............................................................................................................................................AGCACGCGAAATACGAGCCGGAGTACC.......................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TCCTGGACTCCTCTACAAACCCG.................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................C-----AGCACGCGAAATACGAGCCGGAG...........................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGTC.....................................................................................................	26	7	1.00	7	0	0	0	0	0	0	0	0	0	0	0	0	5	2	0	0	0
......................................................................................................................................................................TACCTCAAGGCAGCGTCCTTGGT....................	23	4	1.00	4	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGTTA....................................................................................................	27	7	1.00	7	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0
.........................................................................ATGCCATACTCAAATCGTATACTGAA..............................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................CATACTCAAATCGTATACTGAAGGAAGA........................................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAACC-----AG................................................................	28	5	1.00	5	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0
..........................................................................................................................C---GGTTCCTCAACC-----AGCACGCGAAA.......................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................TACAAACCCGAGTCCCACCTTCCCAGT................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................TACGAGCCGGAGTACCTCAAGGCAGCGT...........................	28	3	1.00	3	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0
.........................................................TTCCCAGTTC-ACACTATGCCAT.................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................AGCACGCGAAATACGA..................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................TCCTCAACC-----AGCACGCGAAATACGAGC................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................CATCCTGGACTCCTCTACAAACCCT.................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................TACGAGCCGGAGTACCTCAAGGCAG..............................	25	3	1.00	3	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0
.........................TCCTGGACTCCTCTACAAACCCGAGG..............................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CTCAAGGCAGCGTCCTTGGT....................	20	4	1.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAGTT...................................................................................................	28	7	1.00	7	0	0	0	0	0	0	2	0	0	0	0	0	4	1	0	0	0
........................................................................................................................TGC---GGTTCCTCAACC-----AGCACGCG..........................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TGC---GGTTCCTCAACC-----AGCACGCGAAT.......................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................ACGAGCCGGAGTACCTCAAGGCAGC.............................	25	3	1.00	3	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0
.....................................CTACAAACCCGAGTCCCAC.........................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATTC.....................................................................................................	26	7	1.00	7	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0
........................ATCCTGGACTCCTCTACAAACCC..................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATC......................................................................................................	25	7	1.00	7	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0
...............................................................................................................................................AGCACGCGAAATACG...................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................CTCTACAAACCCGAGTCCCACCTTC.....................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTCCTCAACC-----AGCACGCGAAATACGAGC................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...AGGCGTTCGACAGAGTGTGGCA........................................................................................................................................................................................	22	6	1.00	6	0	0	0	0	0	0	0	0	0	0	3	0	3	0	0	0	0
.......................................ACAAACCCGAGTCCCACCTTCCCAGT................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................GCATCCTGGACTCCTCTACAAACCC..................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GGCATCCTGGACTCCTCTACAAAC....................................................................................................................................................................	24	9	0.89	8	0	0	0	0	0	0	1	0	1	0	0	0	6	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGTA.....................................................................................................	26	7	0.86	6	0	0	0	0	0	0	1	0	0	0	0	0	5	0	0	0	0
.......................................................................................TCGTATACTGAAGGAAGAGAGTT...................................................................................................	23	7	0.86	6	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0
..........CGACAGAGTGTGGCATCCTGGACTCC.............................................................................................................................................................................	26	6	0.83	5	0	0	0	0	0	0	0	2	0	0	3	0	0	0	0	0	0
..........CGACAGAGTGTGGCATCCTGGACTC..............................................................................................................................................................................	25	6	0.83	5	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AGCAGGCGTTCGACAGAGTGTGGCA........................................................................................................................................................................................	25	6	0.83	5	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0
AGCAGGCGTTCGACAGAGTGTGG..........................................................................................................................................................................................	23	6	0.83	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
...............................................................................................................................................................GCCGGAGTACCTCAAGGCAGCGTCCT........................	26	5	0.80	4	0	0	0	0	0	0	0	0	2	0	0	0	2	0	0	0	0
.................................................................................................................................................................CGGAGTACCTCAAGGCAGCGTCCT........................	24	5	0.80	4	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0
..CAGGCGTTCGACAGAGTGTGGCAT.......................................................................................................................................................................................	24	5	0.80	4	0	0	0	0	0	0	0	0	0	1	0	0	2	1	0	0	0
......................GCATCCTGGACTCCTCTACAAAC....................................................................................................................................................................	23	9	0.78	7	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0
....................................................................................................................................................................AGTACCTCAAGGCAGCGTCCTTGGT....................	25	4	0.75	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
...AGGCGTTCGACAGAGTGTGGCATCCTG...................................................................................................................................................................................	27	4	0.75	3	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGTT.......................................................................................................	24	7	0.71	5	0	0	0	0	0	0	0	1	0	0	0	0	4	0	0	0	0
......CGTTCGACAGAGTGTGGCATC......................................................................................................................................................................................	21	7	0.71	5	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0
.......................CATCCTGGACTCCTCTACAAAC....................................................................................................................................................................	22	9	0.67	6	0	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................TACGAGCCGGAGTACCTCAAGGC................................	23	3	0.67	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAACC-----A.................................................................	27	5	0.60	3	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0
...............................................................................................................................................................GCCGGAGTACCTCAAGGCAGCGTC..........................	24	5	0.60	3	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0
..................................................................................................AGGAAGAGAGTTCCAAGTGCGATGC---GGT................................................................................	28	5	0.60	3	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAACA-----..................................................................	26	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCA..........................................................................	23	5	0.60	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
............................................................................................................TTCCAAGTGCGATGC---GGTTCCTCAACC-----..................................................................	27	5	0.60	3	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0
................................................................................................................AAGTGCGATGC---GGTTCCTCAACC-----A.................................................................	24	5	0.60	3	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0
.............................................................................................................................................................................AGGCAGCGTCCTTGGTCCCATCCTC...........	25	5	0.60	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
AGCAGGCGTTCGACAGAGTGTGGCAT.......................................................................................................................................................................................	26	5	0.60	3	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAA.........................................................................	24	5	0.60	3	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0
...................................................................................CAAATCGTATACTGAAGGAAGAGAGT....................................................................................................	26	7	0.57	4	0	0	0	0	0	0	0	1	1	0	0	0	2	0	0	0	0
......CGTTCGACAGAGTGTGGCATCCTGGA.................................................................................................................................................................................	26	7	0.57	4	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0
...................................................................................CAAATCGTATACTGAAGGAAGAGA......................................................................................................	24	7	0.57	4	0	0	0	2	0	0	0	0	1	0	0	0	1	0	0	0	0
.......................................................................................TCGTATACTGAAGGAAGAGAGTC...................................................................................................	23	7	0.57	4	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0
...................................................................................CAAATCGTATACTGAAGGAAGA........................................................................................................	22	7	0.57	4	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0
...........................................................................................ATACTGAAGGAAGAGAGT....................................................................................................	18	7	0.57	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGG......................................................................................................	25	7	0.57	4	0	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGG........................................................................................................	23	7	0.57	4	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...............................................................................TACTCAAATCGTATACTGAAGGAAGAG.......................................................................................................	27	6	0.50	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.......................................................................................................................................................................ACCTCAAGGCAGCGTCCTTGGT....................	22	4	0.50	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.................................................................................................................................................................CGGAGTACCTCAAGGCAGCGTCCTTGGT....................	28	4	0.50	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
..............................................................................ATACTCAAATCGTATACTGAAGGAAGA........................................................................................................	27	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TCAAGGCAGCGTCCTTGGT....................	19	4	0.50	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
............................................................................................................................................................CGAGCCGGAGTACCTCA....................................	17	4	0.50	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..............AGAGTGTGGCATCCTGGACTCCTC...........................................................................................................................................................................	24	7	0.43	3	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
.......................................................................................TCGTATACTGAAGGAAGAGAGT....................................................................................................	22	7	0.43	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
........................................................................................CGTATACTGAAGGAAGAGA......................................................................................................	19	7	0.43	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAG.............................................................................................................	18	7	0.43	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................................................................CTGAAGGAAGAGAGTTCCAAGTGCGA.........................................................................................	26	7	0.43	3	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGC........................................................................................................	23	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGTCC....................................................................................................	27	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.........................................................................................GTATACTGAAGGAAGAGAG.....................................................................................................	19	7	0.43	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................TATACTGAAGGAAGAGAGTTCCAAG..............................................................................................	25	7	0.43	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0
...........................................................................................ATACTGAAGGAAGAG.......................................................................................................	15	7	0.43	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.......................................................................................TCGTATACTGAAGGAAGAGAGTTCCAAG..............................................................................................	28	7	0.43	3	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATCT.....................................................................................................	26	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
............................................................................................TACTGAAGGAAGAGAGTTCCAAGTGC...........................................................................................	26	7	0.43	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGTAC....................................................................................................	27	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0
............................................................................................................TTCCAAGTGCGATGC---GGT................................................................................	18	5	0.40	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................AGAGAGTTCCAAGTGCGATGC---GGTT...............................................................................	25	5	0.40	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................AGCGTCCTTGGTCCCATCCTCTAC........	24	5	0.40	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
............................................................................................................TTCCAAGTGCGATGC---GGTTCCTCAAA........................................................................	26	5	0.40	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
......................................................................................................AGAGAGTTCCAAGTGCGATGC---GGT................................................................................	24	5	0.40	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
............................................................................................................................................................................AAGGCAGCGTCCTTGGTCCCATCCT............	25	5	0.40	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................CAGCGTCCTTGGTCCCATCCTCTAC........	25	5	0.40	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0
.................................................................................................................AGTGCGATGC---GGTTCCTCA..........................................................................	19	5	0.40	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...AGGCGTTCGACAGAGTGTGGCATA......................................................................................................................................................................................	24	5	0.40	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
.............................................................................................................................................................................AGGCAGCGTCCTTGGT....................	16	5	0.40	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................TCCAAGTGCGATGC---GGTTCCTCAACC-----AA................................................................	28	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
........TTCGACAGAGTGTGGCATCCTGGACTCC.............................................................................................................................................................................	28	5	0.40	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................AAGGCAGCGTCCTTGGTC...................	18	5	0.40	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...............................................................................................................CAAGTGCGATGC---GGTTCCTCAACC-----AG................................................................	26	5	0.40	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
....GGCGTTCGACAGAGTGTGGCATCCT....................................................................................................................................................................................	25	5	0.40	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
......CGTTCGACAGAGTGTGGCAT.......................................................................................................................................................................................	20	8	0.38	3	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
...AGGCGTTCGACAGAGT..............................................................................................................................................................................................	16	6	0.33	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0
...AGGCGTTCGACAGAGTG.............................................................................................................................................................................................	17	6	0.33	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................GTGGCATCCTGGACTCCTCTACAAAC....................................................................................................................................................................	26	9	0.33	3	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................TACGAGCCGGAGTACCTCAAGGCA...............................	24	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.GCAGGCGTTCGACAGAGTGTG...........................................................................................................................................................................................	21	6	0.33	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..................TGTGGCATCCTGGACTCCTCTACAAA.....................................................................................................................................................................	26	9	0.33	3	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0
.........TCGACAGAGTGTGGCATCCTGGACTCCTC...........................................................................................................................................................................	29	6	0.33	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................TACGAGCCGGAGTACCTCAAGGCAGCG............................	27	3	0.33	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TACTCAAATCGTATACTGAAGGAAGAGA......................................................................................................	28	6	0.33	2	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0
.........TCGACAGAGTGTGGCATCCTGGACTCC.............................................................................................................................................................................	27	6	0.33	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
............................................................................................................................................................CGAGCCGGAGTACCTCAAGGC................................	21	3	0.33	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..CAGGCGTTCGACAGAGTGTGG..........................................................................................................................................................................................	21	6	0.33	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0
..................TGTGGCATCCTGGACTCCTCTAC........................................................................................................................................................................	23	10	0.30	3	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAAT......................................................................................................	25	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAA.........................................................................................................	22	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAATA.....................................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0
.............CAGAGTGTGGCATCCTGGACTCCT............................................................................................................................................................................	24	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATGT.....................................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGCA.....................................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
........................................................................................CGTATACTGAAGGAAGAG.......................................................................................................	18	7	0.29	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
....................................................................................AAATCGTATACTGAAGGAAGAG.......................................................................................................	22	7	0.29	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................ATCGTATACTGAAGGAAGAGAGTTCCA................................................................................................	27	7	0.29	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
..........................................................................................TATACTGAAGGAAGAGAGTTCCA................................................................................................	23	7	0.29	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGCAA....................................................................................................	27	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGATGA.....................................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..................................................................................TCAAATCGTATACTGAAGGAAGAGAGTC...................................................................................................	28	7	0.29	2	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0
.........................................................................................GTATACTGAAGGAAGAG.......................................................................................................	17	7	0.29	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0

droSec2

AGCAGGCGTTCGACAAAGTGTGGCATCCTGGACTCCTCTACAAACTCAAGTCCCACCTTCCCAGTTC-ACACTATGCCCTACTCAAATCGTAAACTGAAGGAAGAGAGTTCCAAGTGCGATGC---GGCTCCTCAACCAGCACGCCAAGGCCCATACGAGCCGGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTATT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
......................GCATCCTGGACTCCTCTACAAACT...................................................................................................................................................................	24	19	0.21	4	4	0	0	0
......................GCATCCTGGACTCCTCTACAAACTC..................................................................................................................................................................	25	19	0.21	4	4	0	0	0
..........................................................................................................................................................TACGAGCCGGAGTACCTCAAGGCAGC.............................	26	5	0.20	1	1	0	0	0
......................GCATCCTGGACTCCTCTACAAACTCA.................................................................................................................................................................	26	18	0.11	2	2	0	0	0
..........................................................TCCCAGTTC-ACACTATGCCCTACTC.............................................................................................................................	25	12	0.08	1	1	0	0	0
...............................................................................................TGAAGGAAGAGAGTTCCAAGTGCGA.........................................................................................	25	16	0.06	1	1	0	0	0
......................GCATCCTGGACTCCTCTACAAACTCC.................................................................................................................................................................	26	19	0.05	1	1	0	0	0
......................GCATCCTGGACTCCTCTACAAACTCT.................................................................................................................................................................	26	19	0.05	1	1	0	0	0
......................GCATCCTGGACTCCTCTACAAAC....................................................................................................................................................................	23	19	0.05	1	1	0	0	0
..................TGTGGCATCCTGGACTCCTCT..........................................................................................................................................................................	21	20	0.05	1	0	0	1	0
......................GCATCCTGGACTCCTCTACAAAAAA..................................................................................................................................................................	25	20	0.05	1	1	0	0	0

droYak3

AACAAGCGTTTGATCGAGTCTGGCACAATGGATTACTATATAAAATTAAAAAGTGGCTACCTGCACC-ATATTTCTTATTATTAAAGTCATACCTAACAAATAGACACTTTTACGTGCAACAA---AAAAATGAATCCTCGTCGTTGTTCACTATAAAGGCTGGAGTCCCACAAGGCAGCGTCTTAGGGCCTGTTTTATACACCCTGTA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
............................................................................................................................................GTCGTTGTTCACTATAAAGGCTGGAG...........................................	26	4	1.75	7	0	0	0	0	0	0	0	0	0	0	7
.......................................................................................................................................TCCTCGTCGTTGTTCACTATAAAGGC................................................	26	5	1.40	7	0	0	0	0	0	0	0	0	0	0	7
.........................................................................................................................................CTCGTCGTTGTTCACTATAAAGGC................................................	24	5	0.80	4	0	4	0	0	0	0	0	0	0	0	0
...............GAGTCTGGCACAATGGATTACTATA.........................................................................................................................................................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................GTTCACTATAAAGGCTGGAGTCCCA......................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................CTCGTCGTTGTTCACTATAAAGGCT...............................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TTCACTATAAAGGCTGGAGTCCC.......................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................TCGTTGTTCACTATAAAGGCTGGAGT..........................................	26	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1
.............................................................................................................................................TCGTTGTTCACTATAAAGGCTGGAG...........................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
......................GCACAATGGATTACTATATAAAATTA.................................................................................................................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................TACCTGCACC-ATATTTCTTATTATT..............................................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................ATTAAAGTCATACCTAACAAATAG.........................................................................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................TGAATCCTCGTCGTTGTTCACTATAA....................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................ATTAAAGTCATACCTAACAAATAGA........................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................TCCCACAAGGCAGCGTCTTAGGGCCTGT...............	28	6	0.17	1	0	1	0	0	0	0	0	0	0	0	0
...AAGCGTTTGATCGAGTCTGG..........................................................................................................................................................................................	20	7	0.14	1	0	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................................TGGAGTCCCACAAGGCAGCGTCTTAG......................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
................................................AAAAGTGGCTACCTGCACC-ATATTTCT.....................................................................................................................................	27	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................CCACAAGGCAGCGTCTTAGGGCACT................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................TCCCACAAGGCAGCGTCTTAGGGC...................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................TCCCACAAGGCAGCGTCTTAGGGCC..................	25	9	0.11	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................GGAGTCCCACAAGGCAGCGT...........................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................GAGTCCCACAAGGCAGCGTCTTAGGGCCT.................	29	9	0.11	1	0	0	0	0	0	0	1	0	0	0	0

droEre2

AGCAGACGTTCGACAGAGTGTGGCATCCCGGACTCCTCCACAAACTCAAGTCCAACCTTCCCAGTTC-CCACTACGCTCTACTCAAATAGTATACTGAAGGAAGAGAATTCCAAGTGCGATGC---GGATCCTCAACCAGCACGCCAAGGCCCATACGAGCCGGAGTACCTCAAGGCAGCGTCCTTGGTCCCATCCTCTACACCCTGTT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.............................................................................................................................................................................AGGCAGCGTCCTTGGTCCCATCCTC...........	25	7	0.14	1	0	0	0	0	1	0	0

dvi_2108

scaffold_12736:358549-358654 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-18.7	-18.6	-18.4