ID:

dvi_21064

 Coordinate:

scaffold_13049:22947811-22947961 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.1 -2.4 -2.1

Flybase annnotation

exon [dvir_GLEANR_13857:4]; CDS [Dvir\GJ14010-cds]; intron [Dvir\GJ14010-in]

Repeatable elements

NameClassFamilyStrand
T-richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################--
CTGTATCTGTACATAGATTTAACAGTGGGCTAACATCATGAGGCAACGAAATGTATTTAACTTAACGTCATAACCATTTAATGCAAAGTTAATTGCATTGATTTTATTTTAATTATTTTGTTTCTCTTTATTACAATTTATTATTATTTCAATGTCTGACATAATGCCCAACCCGCCCTTCCCGCCCCCAACCTATCATAGAACGGCGCTCAAGAGCTGCAAAATACAACAACAGAAAGCACCGCATAAAG
***************************************************************************************************************..............................((((((.(((.....))).))))))...********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060669
160x9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body		 SRR060660
Argentina_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060683
160_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR1106729
mixed whole adult body
 V047
embryo
 SRR060682
9x140_0-2h_embryos_total
....................................................................................................................................................................................................................AGAGCTGCAAAATACAACA.................... 19 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATACAACAACAGAAAGCACCGC...... 22 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TACAACAACAGAAAGCACCGCATA... 24 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CAAAATACAACAACAGAAAGCACCGC...... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GCAGAACGGCGCTCAAGAGCTGCA.............................. 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ACATAGATTTAACAGTGGGCTAAC......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AACCTATCATAGAACGGCGCTCAAGAGCTGCAAA............................ 34 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................GCAGAACGGCGCTCAAGAGCT................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TTCAATGTCTGACATAATGCCC.................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ACAGTGGGCTAACATCATGAGGCAACG........................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GCAGAACGGCGCTCAAGAGCTGCAAA............................ 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAATACAACAACAGAAAGCACCGCA..... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CAACCTATCATAGAACGGCGCT......................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ATCTGTACATAGATTTAACA................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATTATTTTGTTTCTCTTTATTAC..................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GTACATAGATTTAACAGTGGGCT............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................TTTAACAGTGGGCTAACATC...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTAATGCAAAGTTAATTGCATTG....................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAATGTCTGACATAATGCCCAACCCGCCC......................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GGCGCTCAAGAGCTGCAAAATACA....................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................TTATTTTGTTTCTCTTTATT....................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GAACGGCGCTCAAGAGCTGCAAA............................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TACAACAACAGAAAGCACCGC...... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................AATACAACAACAGAAAGCAC......... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGCAGAACGGCGCTCAAGAGCTGCA.............................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGAACGGCGCTCAAGAGCT................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACAACAACAGAAAGCACCGCA..... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTAACGTCATAACCATTTAAT......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CAACAGAAAGCACCGCATA... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ACAGAAAGCACCGCATAAAG 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACGGCGCTCAAGAGCTGCA.............................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATAGATTTAACAGTGGGC............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GCAGAACGGCGCTCAAGAGCTGC............................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATACAACAACAGAAAGCACCG....... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................TAGAACGGCGCTCAAGAGCTGC............................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AACAACAGAAAGCACCGCA..... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GGAGAACGGCGATCAAGAGCTGCAA............................. 25 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................CATAATGCCCAACCCGCCCTTCCCGCC................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TAACATCATGAGGCAACGAAAT....................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGAACGGAGCTCAAGAGCTGC............................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATACAACAACAGAAAGCACC........ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAATACAACAACAGAAAGCAC......... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTTAATTTTTTTGTTTCTCTT........................................................................................................................... 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................AGCAGAACGGCGCTCAAGAGC.................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GACATAGACATGTATCTAAATTGTCACCCGATTGTAGTACTCCGTTGCTTTACATAAATTGAATTGCAGTATTGGTAAATTACGTTTCAATTAACGTAACTAAAATAAAATTAATAAAACAAAGAGAAATAATGTTAAATAATAATAAAGTTACAGACTGTATTACGGGTTGGGCGGGAAGGGCGGGGGTTGGATAGTATCTTGCCGCGAGTTCTCGACGTTTTATGTTGTTGTCTTTCGTGGCGTATTTC
**********************************************************************************..............................((((((.(((.....))).))))))...*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060681
Argx9_testes_total
 V116
male body		 V047
embryo
 SRR060677
Argx9_ovaries_total
 M028
head
 M027
male body		 M061
embryo
.......................................................................................................................................................................GGTTGGGCGGGAAGGGCGGGG............................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGCCGCGAGTTCTCGACGTT............................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................TTGTCACCCGATTGTAGTACT.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GGAAGGGCGGGGGTTGGATAG...................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................TTTGTTGTCTTTCGTGGCGTAT... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................CCGCGAGTTCTCGACGTTTTA.......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................GTAGTACTCCGTTGCTTTACA..................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................CGATTGTAGTACTCCGTTGCT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................CGGAGGTTGGATAGGATGT................................................. 19 3 9 0.89 8 1 0 0 0 0 0 0 6 0 1 0 0
.......................................................................................................................................................................................CGGAGGTTGGATAGGATG.................................................. 18 3 20 0.55 11 1 0 0 0 0 0 0 5 0 3 1 1
..........................................................TTGAGTTGCAGTGTTGGTAAGT........................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................GGGTGGGCGGGAAGGGCG.................................................................. 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGGAGGGTGGATAGGATC.................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:22947761-22948011 + dvi_21064 CTGTATCTGTACATAGATTT---------------------------------------------------------------------AACAGTGGGCTAACATC-AT-GAGGCA-ACGAAATGT----------ATTTAAC-TTAACG---------------TCATAACCATTTAATGCAAAG---T------------TAA-----------------------TTGCATT--GAT-----TT-TATT----TTAATT-ATTT---T-GTTTCT--C--TTTAT-----TAC------AATT---TAT----T--ATTATTTCAA-TG--TCTGACATAA----------TGCCCAACCCGCCCTTCCCGCCCCCA--ACCTAT-------------------------------------------------------------------------------CATAGAACGGCGCTCAAGAGCTGCAAAATACAACAACAGAAAGCACCGCATAAAG----
droMoj3 scaffold_6680:17559455-17559667 + dmo_2522 ATGTATCTGTACATAGACTT-------------------------ATTTGT-------------------------------------------GGGGCTAACAAC-AT-GATGCA-ACGAATTGT----------G----------------------------------------------------T------------TAA------CTGCATACAAATTACTCCAGCATT--GAT-----CT-TGAC----TTTAT---------T-GTTTCT--C--TTTAT-----T---------ATT---TCT----T--ATTATTCCAA-TA--TTTGACATAAT-----------------------TCCCGACCCCTT-CAC---T-------------------------------------------------------------------------------CATAGAACGGCGCTCAAGAACTGCAAAATACAACAACAGAAAGCACCGCTTAGAC----
droGri2 scaffold_15110:18221593-18221844 + TAC---------------------------------------------------------------------------------ACGTAAC-ATTTAACGAACATGCAA-CATACA----GCGTGCAACGAATTGCATTTGTCATTAACACCTAACCCTTAACCACCACCACCACTTAA-GCAAAC---A----GA----TTTGA---------------------------TTTTTAAT-----TT-GTGT-------------------TTA-----AT--T---CGTTTTGTT--TTTCT---TTTCAT----T--ATTATTTCAATTT--TTTTTTGTTTTTTGACAAAAT-------------GTCCAA----TTCAATCCCT-------------------------------------------------------------------------------CATAGAATGGCGCTCAAGAACTGCAAAATACAACAACTGAAAGCACCGCATAGAA----
droWil2 scf2_1100000004511:8563052-8563323 - dwi_667 ATT-AACTAA-------------------------------------------------------------------------------ACATAATGGTAAAG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GAAATTTAAATTGA------------TTT-----------------------CTTTATCTTATTTGG-------------TTTTTG-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GTG---TATTCT----T--TTAAT-----------TTGCTAAATT-----------------------ATTTCTTTGACA-ATC---TACCTCCCTCTCCTTCCCCTACACCACCAATCAACCAACCAACCAACCGACCGACCAACCAACCAACTCTCCTCCACAACTTTAGAATGGCGCTCAAGAGCTGCAAAATACAACAACAGAAAGCACTGCATAAAT----
dp5 Unknown_group_492:20671-20735 + TTAATA------------------------------------------------------------------------------------CTAATAC------------------------------------------------------------------------------------------------------------------------------------------TAATTCTAATTTTTTT-----TTT-----ATTTATT-TT-----TT--TTTAT-----TAT------TATT---TTT----T--ATTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_47:404859-404921 - CCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAACGGCGCTCAGGAGGTGCAGAATACTACAACAGAAAGTACTGCATAGATCCAG
droAna3 scaffold_13337:19470882-19471136 + TTGCGACGGAGAAGAATATTAAAAACTTAACACCTAACCTAAGAGGCTTTTGGGACTAACATTCTTTTATTTTA-TTAGCT-ACTTGTAACTAATTGGCTAACACAG----------------------------------------------------------------------------------------------TTGACATACATTACATTCAA----------------ACC----------------CTTCTC-ATAT---G-ATTTC---T--TTTAT-----GTTT--TATT--TTACTATTCGAT--TTGATTTATATCC--A-----A---------------------------ATCCCA--CACACAAT---C-------------------------------------------------------------------------------CCCAGAACGGAGCTCAAGAGCTGCAAAATACGACTACAGAGAGCACTGCTTAAAG----
droBip1 scf7180000396360:665402-665588 + ------------------------------------------------------------------------------------------------------------------------ACACAC----------ATT-------------------------------------TAATGTAAAACCAAACAACAACAA--AAA------ATGCATTCAAA------TCATTTTCTACC----------------TTTATC-ATAT---G-ATTTCT--T--TTTAT-----GTT---TATT---TACTATTTGGTTTGTTATTTATATCC--CA--------------------------------ATCCCA--CACACAAT---T-------------------------------------------------------------------------------CCCAGAACGGAGCTCAAGAGGTGCAAAATACGACTACTGAGAGCACTGCTTAATG----
droKik1 scf7180000302696:1939278-1939346 - AGTTCA------------------------------------------------------------------------------------TTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------CTT--------TTTTTTATTTATTTTTTTT---T-TT----CTT-CTTTTA-----ATT--GGTTT---TAATTT----T--AGTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454113:2520728-2520922 + CTGTAACT---------------------------------------------------------------------------------ACTAATTGGCTAACAAA-AA-CA-----CACACACAC----------ATT-------------------------------------TAATGTAAAACCGA------------AAC-----------------------CTGCATTTTACT----------------TTTAAC-GATC---G-AA-----AT--TTTAA-----GTT---TAAT---TATCAT----T--ATGATTTCTACCC--CTCACCA---------------------------TTCCCA--AA-AAAAT---C-----------------------------------------------------------------------------CCCTTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAAAG----
droEle1 scf7180000491193:4054647-4054838 - TAT---------------------------------------------------------------------------------CTGTAACTAATTGGCTAACAAACA---------CACACACAC----------AAT-------------------------------------TAATGTAAAACCAA------------AAA-----------------------CTGCTTTTTACT----------------TTTGAC-ATTT---G-AA-----TT--TTTAA-----GTT--A-ACT---TATCGT----T--ATGATTTCTACCC--CTCGCTA---------------------------TTACCA--CACAAAAT---C-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAAAATACCACCACAGAGAGCACTGCATAAAG----
droRho1 scf7180000773422:147035-147227 + CTTTAC------------------------------------------------------------------------------CTGTAACTAATTGGCTAACAAAC-----------ACACACAC----------ATT-------------------------------------TACTGTAAAACCGA------------AAA-----------------------CTGCATTTTACT----------------TTTAAC-ATTT---G-AA-----CT--TTTAA-----GTT---TACT---TATCGT----T--ATGATTTCTACCC--CTCGCTT---------------------------TTCCCA--CACAAAAT---C-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAAAC----
droBia1 scf7180000302428:4366721-4366910 - CTGTA------------------------------------------------------------------------------------ACTAATTGGCTAACACA-----------CAGACACAC----------ATT-------------------------------------TAATGTAAAACAGA------------AAA-----------------------CTGTATTTTACT----------------TTTATC-GTTT---GAAA-----AC--CCTAA-----GTT--G-ACT---TATCAT----T--ATGATTTCTACCC--CTCGCCATCCC-------------------------TCCA--CACAAAAA---C-------------------------------------------------------------------------------CCCAGACCGGCGCTCAAGAGCTGCAGAACACAACCACAGAGAGCACTGCATAGAG----
droTak1 scf7180000415254:491002-491193 + -------------------------------------------------------------------------------------------TAATTGGCTAACAAACAAACAAAAATCACACACAC----------ATT-------------------------------------TAATGTAAAACCGA------------GAA-----------------------CTGCATTTTACT----------------TTTACC-ATTT---G-AA-----AT--TTTAA-----GTT--G-ACT---TATCGT----T--ATGATTTTTACCC--C-CGCTA---------------------------TCCCCACACACAAAAT---C-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCTTAGAA----
droEug1 scf7180000409466:4205722-4205919 - CTGTA------------------------------------------------------------------------------------ACTAATTGGCTAACAAACA--CAAACA-CAAACACAC----------ATT-------------------------------------TAATGTAAAAACGA------------AAA-----------------------TTGCATTTTACT----------------TTTAAC-ATTT---G-AA-----AT--TTTAA-----GTTTTGTACT---TATCAT----T--ATGATTTCTGCCC--CTCGTTA---------------------------TCCCCA--CACAAAAT---A-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAGAATACAACCACAGAGAGCACTGCATAAAA----
dm3 chr3L:12115205-12115407 - CTGTG------------------------------------------------------------------------------------ACTAATTGGCTAACAAGCAA-C-------ACACACAC----------ACT-------------------------------------TAATTTACAACCGA------------AAC-----------------------CAGCATTTTGCT----------------TTCATCCCTTC---G-ATT---TATTTTTGAA-----GTT--GTACT---TACGTT----A--ATGATTTCTACCCCCCTCGCCATGTT-----------------------TTCCCATGTTCA-AAT---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----
droSim2 3l:11813748-11813952 - dsi_6404 CTGTG------------------------------------------------------------------------------------ACTAATTGGCTAACAAACAA-CACACA-CACACACGC----------ACC-------------------------------------TAATTTGAAACCGA------------AAC-----------------------CCGCATTTTGCT----------------TTCAACCATTC---G-AG-----ATTCTTTAA-----GTT--GTACT---TACGTT----T--ATGATTTCTACCC--CTCGCCATGTT-----------------------TTCCCACGTTCA-AAT---T-------------------------------------------------------------------------------CCCAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----
droSec2 scaffold_0:4299964-4300190 - TTTTAG-T-------------------------------------------------------------TTTTATCTAGCTAACCAGTGACTAATTGGCTAACAAACAA-CACACA-CACACACGC----------CTC-------------------------------------TAATTTAAAACCGA------------AAC-----------------------CAGCATTTTGCT----------------TTCAACCATTC---G-AG-----ATTTTTTAA-----GTT--GTACT---TACGTT----T--ATGATTTCTACCC--CTCGCCATGTT-----------------------TTCCCACGTTCA-AAT---T-------------------------------------------------------------------------------CCCAGAACGGCGCTCAAGAACTGCAAAATACAACCACAGAGAGCACTGCATAGAA----
droYak3 3L:12163162-12163353 - CTT-AC------------------------------------------------------------------------------CTGTGACTAATTGGCTAACAAA---------------CACAC----------ATT-------------------------------------TAATTTAAACCCGA------------AAC-----------------------CCGCATTTTACT----------------TTCAACCATTG---TAAA-----AT--TTTAT-----GTT--ATACT---TATGTT----T--ATGATTTCTACCC--CGCGCTATGT-------------------------TCCCA--CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----
droEre2 scaffold_4784:12104951-12105111 - ------------------------------------------------------------------------------------------------------------------------ACACAC----------ATT-------------------------------------T-----AAAAACGA------------AAA-----------------------CCGCATTTTACT----------------TTCAACCATTT---TAAG-----AT--TTTAA-----GTT--GTACT---TATGTT----T--ATGATTTCTACCC--CTCGCTATGT-------------------------TCCCA--CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTGTATCTGTACATAGATTT---------------------------------------------------------------------AACAGTGGGCTAACATC-AT-GAGGCA-ACGAAATGT----------ATTTAAC-TTAACG---------------TCATAACCATTTAATGCAAAG---T------------TAA-----------------------TTGCATT--GAT-----TT-TATT----TTAATT-ATTT---T-GTTTCT--C--TTTAT-----TAC------AATT---TAT----T--ATTATTTCAA-TG--TCTGACATAA----------TGCCCAACCCGCCCTTCCCGCCCCCA--ACCTAT-------------------------------------------------------------------------------CATAGAACGGCGCTCAAGAGCTGCAAAATACAACAACAGAAAGCACCGCATAAAG----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGCAAAATACAACA........................1912.002001000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGAAAGCACCGC..........2212.002000100000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACAGAAAGCACCGCATA.......2412.002001000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATACAACAACAGAAAGCACCGC..........2611.001000000000000000000100000000000000000000000000000000000000000000
..........ACATAGATTT---------------------------------------------------------------------AACAGTGGGCTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A--ACCTAT-------------------------------------------------------------------------------CATAGAACGGCGCTCAAGAGCTGCAAA................................3411.001000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................TTCAA-TG--TCTGACATAA----------TGCCC.......................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................ACAGTGGGCTAACATC-AT-GAGGCA-ACG......................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACAACAACAGAAAGCACCGCA.........2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CA--ACCTAT-------------------------------------------------------------------------------CATAGAACGGCGCT.............................................2211.001000000000000000001000000000000000000000000000000000000000000000
....ATCTGTACATAGATTT---------------------------------------------------------------------AACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ATT-ATTT---T-GTTTCT--C--TTTAT-----TAC------................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........GTACATAGATTT---------------------------------------------------------------------AACAGTGGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
.................TTT---------------------------------------------------------------------AACAGTGGGCTAACATC-...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TTAATGCAAAG---T------------TAA-----------------------TTGCATT--G................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCTCAAGAGCTGCAAAATACA...........................2411.001000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................TT-ATTT---T-GTTTCT--C--TTTAT-----T........................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGCGCTCAAGAGCTGCAAA................................2311.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACAGAAAGCACCGC..........2111.001000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACAACAGAAAGCAC.............2011.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAAGAGCT.....................................1911.001000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGAAAGCACCGCA.........2111.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................TTAACG---------------TCATAACCATTTAAT..........................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGAAAGCACCGCATA.......1911.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAAGCACCGCATAAAG----2011.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGCTCAAGAGCTGCA..................................1911.001001000000000000000000000000000000000000000000000000000000000000
............ATAGATTT---------------------------------------------------------------------AACAGTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGAAAGCACCG...........2111.001000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAACGGCGCTCAAGAGCTGC...................................2211.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGAAAGCACCGCA.........1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CATAA----------TGCCCAACCCGCCCTTCCCGCC......................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................TAACATC-AT-GAGGCA-ACGAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGAAAGCACC............2011.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACAACAACAGAAAGCAC.............2111.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
ATGTATCTGTACATAGACTT-------------------------ATTTGT-------------------------------------------GGGGCTAACAAC-AT-GATGCA-ACGAATTGT----------G----------------------------------------------------T------------TAA------CTGCATACAAATTACTCCAGCATT--GAT-----CT-TGAC----TTTAT---------T-GTTTCT--C--TTTAT-----T---------ATT---TCT----T--ATTATTCCAA-TA--TTTGACATAAT-----------------------TCCCGACCCCTT-CAC---T-------------------------------------------------------------------------------CATAGAACGGCGCTCAAGAACTGCAAAATACAACAACAGAAAGCACCGCTTAGAC----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGCGCTCAAGAACTGC...................................2011.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGAAAGCACC............2011.001000001
...........................................................................................................................................................................................................................................................C----TTTAT---------T-GTTTCT--C--TTTAT-----T---------ATT---TC.......................................................................................................................................................................................................................2511.001100000
....ATCTGTACATAGACTT-------------------------ATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................AC---T-------------------------------------------------------------------------------CATAGAACGGCGCTCAAGAACTGC...................................2711.001000001
......................................................................................................................................................................................................................................................................................................................................................AAT-----------------------TCCCGACCCCTT-CAC---T-------------------------------------------------------------------------------CATAGAAC...................................................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................CCCGACCCCTT-CAC---T-------------------------------------------------------------------------------CATAG......................................................2011.001100000
.......................................................................................................................................................................................................................ATACAAATTACTCCAGCATT--GAT-----CT-T.....................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................................................A--TTTGACATAAT-----------------------TCCCGACCCCT...................................................................................................................................................2311.001100000
...................................................................................................................A-ACGAATTGT----------G----------------------------------------------------T------------TAA------CTGC.......................................................................................................................................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................................................................................AAATTACTCCAGCATT--GAT-----CT-TGA...................................................................................................................................................................................................................................................................................2411.001100000
.................................................GT-------------------------------------------GGGGCTAACAAC-AT-GATG............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGAACGGCGCTCAAGAAC......................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAAAGCACCGCTTAGAC----2111.001000001
............................................................................................................................................................................................................................................................................................TTAT-----T---------ATT---TCT----T--ATTATTCCA......................................................................................................................................................................................................2111.001100000
....................................................................................................AACAAC-AT-GATGCA-ACGAATTGT----------G----------------------------------------------------T------------....................................................................................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................T-CAC---T-------------------------------------------------------------------------------CATAGAACGGCGCTCAA..........................................2211.001100000
..................................................................................................CTAACAAC-AT-GATGCA-ACG......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................CTAACAAC-AT-GATGCA-ACGAATTGT----------G----------------------------------------------------T------------....................................................................................................................................................................................................................................................................................................................................2711.001000001
......CTGTACATAGACTT-------------------------ATTTGT-------------------------------------------GGGGCTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.........................................................................................................................................................................................................................................................GAC----TTTAT---------T-GTTTCT--C--TTTAT-----T---------ATT---T........................................................................................................................................................................................................................2611.001100000
............................................................................................................................................................................................................................AATTACTCCAGCATT--GAT-----CT-TGA...................................................................................................................................................................................................................................................................................2311.001100000
..........ACATAGACTT-------------------------ATTTGT-------------------------------------------GGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAACTGCAAA................................2211.001100000
...................................................................................................TAACAAC-AT-GATGCA-ACGAATTGT----------G----------------------------------------------------T------------....................................................................................................................................................................................................................................................................................................................................2611.001000001
............................................................................................................................................................................................................................AATTACTCCAGCATT--GAT-----CT-......................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................ATACAAATTACTCCAGCATT--GAT-----CT-......................................................................................................................................................................................................................................................................................2511.001100000
.............................................................................................................................................................................................................................ATTACTCCAGCATT--GAT-----CT-TGAC----..............................................................................................................................................................................................................................................................................2311.001100000
droGri2
TAC---------------------------------------------------------------------------------ACGTAAC-ATTTAACGAACATGCAA-CATACA----GCGTGCAACGAATTGCATTTGTCATTAACACCTAACCCTTAACCACCACCACCACTTAA-GCAAAC---A----GA----TTTGA---------------------------TTTTTAAT-----TT-GTGT-------------------TTA-----AT--T---CGTTTTGTT--TTTCT---TTTCAT----T--ATTATTTCAATTT--TTTTTTGTTTTTTGACAAAAT-------------GTCCAA----TTCAATCCCT-------------------------------------------------------------------------------CATAGAATGGCGCTCAAGAACTGCAAAATACAACAACTGAAAGCACCGCATAGAA----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAAAATACAACAACTGAA..................2211.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTGAAAGCACCGCA.........1811.00110
........................................................................................................................................ATTTGTCATTAACACCTAACCCTTA.............................................................................................................................................................................................................................................................................................................................................................................2511.00110
...............................................................................................................................................................................................................................................T-----TT-GTGT-------------------TTA-----AT--T---CGTTTTGT.......................................................................................................................................................................................................................................2111.00110
....................................................................................................................................................CACCTAACCCTTAACCACCACCACCAC...............................................................................................................................................................................................................................................................................................................................................................2711.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATACAACAACTGAAAGCACCG...........2511.00101
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGCTCAAGAACTGC...................................1811.00110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATACAACAACTGAAAGC...............2411.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGAATGGCGCTCAAGAACTGC...................................2411.00110
..............................................................................................................................................................................................................................................................................................................................................TTTTTTGTTTTTTGACAAAG............................................................................................................................................................................2030.33110
droWil2
ATT-AACTAA-------------------------------------------------------------------------------ACATAATGGTAAAG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GAAATTTAAATTGA------------TTT-----------------------CTTTATCTTATTTGG-------------TTTTTG-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GTG---TATTCT----T--TTAAT-----------TTGCTAAATT-----------------------ATTTCTTTGACA-ATC---TACCTCCCTCTCCTTCCCCTACACCACCAATCAACCAACCAACCAACCGACCGACCAACCAACCAACTCTCCTCCACAACTTTAGAATGGCGCTCAAGAGCTGCAAAATACAACAACAGAAAGCACTGCATAAAT----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................CTTTGACA-ATC---TACCTCCCT..................................................................................................................................2014.00401030
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGAAAGCACT............2014.00400040
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGCGCTCAAGAGCTGCA..................................2113.00301200
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGAAAGCACTGCATA.......2112.00200020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACAACAGAAAGC...............1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................CA-ATC---TACCTCCCTCTCCTTCCC.........................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................TG-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GTG---T...........................................................................................................................................................................................................................2511.00100010
........AA-------------------------------------------------------------------------------ACATAATGGTAAAG--ACA..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGGCGCTCAAGAGCTG....................................2011.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGAAAGCACTGCATA.......2511.00100010
.....................................................................................................AG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................2011.00100010
...................................................................................................AAAG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GAAA..........................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....................................................................................................................................................................................TTAAATTGA------------TTT-----------------------CTTTATCTTATTT.............................................................................................................................................................................................................................................................................................2511.00101000
.................................................................................................................A-------CACAC----AA----GA--------------------------------------GAAATTTAAATTGA------------T...................................................................................................................................................................................................................................................................................................................................2511.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCACAACTTTAGAATGGCGCT.............................................2311.00100010
......CTAA-------------------------------------------------------------------------------ACATAATGGTAAAG--AC...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGAGCTGCAAAATAC............................1911.00100010
...................................................................................................AAAG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GAAAT.........................................................................................................................................................................................................................................................................................................................................................2611.00100010
........AA-------------------------------------------------------------------------------ACATAATGGTAAAG--ACAA-CTT.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
................................................................................................................................................................................................................................................................TTTTTG-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GT................................................................................................................................................................................................................................2711.00100010
.....................................................................................................................................................................................................................................................................G-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GTG---TATT........................................................................................................................................................................................................................2711.00100010
...........................................................................................ATAATGGTAAAG--ACAA-CTT.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGAAAGCACTGC..........1911.00100010
.TT-AACTAA-------------------------------------------------------------------------------ACATAATGGTAAAG--AC...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTAGAATGGCGCTCAAGAGCTGC...................................2711.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGGCGCTCAAGAGCT.....................................1911.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACAACAACAGAAAGCACT............2611.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACAACAACAGAAAGCACTGC..........2711.00100010
..........................................................................................................................................................................................................................................................................................................T-GTG---TATTCT----T--TTAAT-----------TTGC...........................................................................................................................................................................................2011.00100010
....................................................................................................AAG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GA............................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCTGCAAAATACAACAACA.....................2511.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGGCGCTCAAGAGCTGC...................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACAGAAAGCACTG...........2011.00100010
.....................................................................................................................................................................................................................................................................G-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GT................................................................................................................................................................................................................................2211.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACAACA........................2011.00100100
.................................................................................................................................................................................................................................................................................A-----TT-ATTTTT-----GTT--T-GTG---TATTCT----T--...............................................................................................................................................................................................................2311.00100010
..............................................................................................................................................................................................................................................................................G-AA-----TT-ATTTTT-----GTT--T-GTG---T...........................................................................................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACAACAGAAAGCACTGCA.........2411.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGAAAGCACTGCAT........1811.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTGCAAAATACAACAACAG....................2511.00100010
.................................................................................................................................................................................................................................................................................A-----TT-ATTTTT-----GTT--T-GTG---TATT........................................................................................................................................................................................................................2011.00100010
...........................................................................................................................................................................................................TT-----------------------CTTTATCTTATTTGG-------------TTTTTG-ATTT---G-A.............................................................................................................................................................................................................................................................2911.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................TGACA-ATC---TACCTCCCTCTCCTTCCCC........................................................................................................................2711.00101000
....................................................................................................AAG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GAAAT.........................................................................................................................................................................................................................................................................................................................................................2511.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGAAAGCACTG...........1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAACCAACTCTCCTCCACAACTTT........................................................2711.00101000
........AA-------------------------------------------------------------------------------ACATAATGGTAAAG--ACAA-C...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................TTTTG-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GTG---T...........................................................................................................................................................................................................................2811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAATGGCGCTCAAGAGCT.....................................2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACACCACCAATCAACCAACCAACCAACC...........................................................................................2811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGAAAGCACTGC..........2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACTTTAGAATGGCGCT.............................................2011.00100010
.......................................................................................................................................................................................................................................................................................TT-ATTTTT-----GTT--T-GTG---TATTCT----..................................................................................................................................................................................................................2111.00101000
.................................................................................................................................................................................................................................................................................A-----TT-ATTTTT-----GTT--T-GTG---TA..........................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................................................................................................................TTTTG-ATTT---G-AA-----TT-ATTTTT-----GTT--T-G.................................................................................................................................................................................................................................2511.00100010
..................................................................................................................................................................................................................................................................TTTG-ATTT---G-AA-----TT-ATTTTT-----GTT--T-GTG---T...........................................................................................................................................................................................................................2711.00100010
...........................................................................................................................CAC----AA----GA--------------------------------------GAAATTTAAATT..................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................................................................................................................................................GTT--T-GTG---TATTCT----T--TTAAT-----------TTGCTAAA.......................................................................................................................................................................................2711.00100010
.....................................................................................................AG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GAA...........................................................................................................................................................................................................................................................................................................................................................2211.00101000
.........A-------------------------------------------------------------------------------ACATAATGGTAAAG--ACAA-C...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAAAGCACTGCATAA......1911.00100010
.....................................................................................................AG--ACAA-CTTA-------CACAC----AA----GA--------------------------------------GA............................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTAGAATGGCGCTCAAGAGCTGC...................................2611.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACAACAGAAAG................1920.50100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACCAACCAACCAACCGACC.......................................................................................2430.33100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAACCAACCAACCGACCGA.....................................................................................22150.07100010
dp5
TTAATA------------------------------------------------------------------------------------CTAATAC------------------------------------------------------------------------------------------------------------------------------------------TAATTCTAATTTTTTT-----TTT-----ATTTATT-TT-----TT--TTTAT-----TAT------TATT---TTT----T--ATTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAACGGCGCTCAGGAGGTGCAGAATACTACAACAGAAAGTACTGCATAGATCCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGGTGCAGAATACT...........................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAGGAGGTGG...................................2111.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACTACAACAGAAAGTACTGC..........2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACAACAGAAAGTACTGCATA.......2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACGGCGCTCAGGAGGTGCAGA................................2511.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAGGAGGTGCAGAA...............................2511.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGCTCAGGAGGTGCAGA................................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCTCAGGAGGTGCAGAATACT...........................2411.001010000
droAna3
TTGCGACGGAGAAGAATATTAAAAACTTAACACCTAACCTAAGAGGCTTTTGGGACTAACATTCTTTTATTTTA-TTAGCT-ACTTGTAACTAATTGGCTAACACAG----------------------------------------------------------------------------------------------TTGACATACATTACATTCAA----------------ACC----------------CTTCTC-ATAT---G-ATTTC---T--TTTAT-----GTTT--TATT--TTACTATTCGAT--TTGATTTATATCC--A-----A---------------------------ATCCCA--CACACAAT---C-------------------------------------------------------------------------------CCCAGAACGGAGCTCAAGAGCTGCAAAATACGACTACAGAGAGCACTGCTTAAAG----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACTACAGAGAGCACTGC..........2112.002100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACGACTACAGAGAGCACT............2512.002000011
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGCAAAATACGACT........................1912.002001001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGCAAAATACGACTAC......................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGAGAGCACTGCTTAA......2011.001000001
.............................................................................AGCT-ACTTGTAACTAATTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................CAAT---C-------------------------------------------------------------------------------CCCAGAACGGAGCTCAAGAGCT.....................................2711.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACTACAGAGAGCACT............2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACTACAGAGAGCACTGCTTAAA.....2511.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACGACTACAGAGAGCAC.............2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGCAAAATACGACTACAGAGAG................2711.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACGACTACAGAGAG................2111.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTCAAGAGCTGCAAAAT..............................2011.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGAGAGCACTGCTTA.......1911.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGCAAAATACGACTACAG....................2311.001000001
...........................................................................................................................................................................................................................AA----------------ACC----------------CTTCTC-ATAT---G-ATTT..........................................................................................................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAAAATACGACTACA.....................1911.001100000
....................................ACCTAAGAGGCTTTTGGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................CATTCAA----------------ACC----------------CTTCTC-ATAT---G-ATTTC---T--TT.................................................................................................................................................................................................................................................2911.001100000
........................................................................................................................................................................................................................................................................................................................................ATCC--A-----A---------------------------ATCCCA--CACACAAT---C-------------------------------------------------------------------------------C..........................................................2211.001010000
...............ATATTAAAAACTTAACACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................TAATTGGCTAACACAG----------------------------------------------------------------------------------------------TTGACATACATT.........................................................................................................................................................................................................................................................................................................................2811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTGCAAAATACG...........................1811.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACTACAGAGAGCACTGCC.........2311.001010000
................................................................................T-ACTTGTAACTAATTGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................TATATCC--A-----A---------------------------ATCCCA--CACACAAT---C-------------------------------------------------------------------------------CCC........................................................2711.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACTACAGAGAGCACTGCTTA.......2511.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACGACTACAGAGAGCACT............2211.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCTGCAAAATACGACT........................2211.001000010
....................................ACCTAAGAGGCTTTTGGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................AT---G-ATTTC---T--TTTAT-----GTTT--TATT--TTACT........................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACGACTACAG....................2411.001000001
............................................................................................................................................................................................................................A----------------ACC----------------CTTCTC-ATAT---G-ATTT..........................................................................................................................................................................................................................................................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACGACTACAGAGAGC...............1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACGGAGCTCAAGAGCTGCA..................................2311.001100000
droBip1
------------------------------------------------------------------------------------------------------------------------ACACAC----------ATT-------------------------------------TAATGTAAAACCAAACAACAACAA--AAA------ATGCATTCAAA------TCATTTTCTACC----------------TTTATC-ATAT---G-ATTTCT--T--TTTAT-----GTT---TATT---TACTATTTGGTTTGTTATTTATATCC--CA--------------------------------ATCCCA--CACACAAT---T-------------------------------------------------------------------------------CCCAGAACGGAGCTCAAGAGGTGCAAAATACGACTACTGAGAGCACTGCTTAATG----SizeHit CountTotal NormTotal
No Reads
droKik1
AGTTCA------------------------------------------------------------------------------------TTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------CTT--------TTTTTTATTTATTTTTTTT---T-TT----CTT-CTTTTA-----ATT--GGTTT---TAATTT----T--AGTGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTGTAACT---------------------------------------------------------------------------------ACTAATTGGCTAACAAA-AA-CA-----CACACACAC----------ATT-------------------------------------TAATGTAAAACCGA------------AAC-----------------------CTGCATTTTACT----------------TTTAAC-GATC---G-AA-----AT--TTTAA-----GTT---TAAT---TATCAT----T--ATGATTTCTACCC--CTCACCA---------------------------TTCCCA--AA-AAAAT---C-----------------------------------------------------------------------------CCCTTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAAAG----SizeHit CountTotal NormTotal
No Reads
droEle1
TAT---------------------------------------------------------------------------------CTGTAACTAATTGGCTAACAAACA---------CACACACAC----------AAT-------------------------------------TAATGTAAAACCAA------------AAA-----------------------CTGCTTTTTACT----------------TTTGAC-ATTT---G-AA-----TT--TTTAA-----GTT--A-ACT---TATCGT----T--ATGATTTCTACCC--CTCGCTA---------------------------TTACCA--CACAAAAT---C-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAAAATACCACCACAGAGAGCACTGCATAAAG----SizeHit CountTotal NormTotal
No Reads
droRho1
CTTTAC------------------------------------------------------------------------------CTGTAACTAATTGGCTAACAAAC-----------ACACACAC----------ATT-------------------------------------TACTGTAAAACCGA------------AAA-----------------------CTGCATTTTACT----------------TTTAAC-ATTT---G-AA-----CT--TTTAA-----GTT---TACT---TATCGT----T--ATGATTTCTACCC--CTCGCTT---------------------------TTCCCA--CACAAAAT---C-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAAAC----SizeHit CountTotal NormTotal
No Reads
droBia1
CTGTA------------------------------------------------------------------------------------ACTAATTGGCTAACACA-----------CAGACACAC----------ATT-------------------------------------TAATGTAAAACAGA------------AAA-----------------------CTGTATTTTACT----------------TTTATC-GTTT---GAAA-----AC--CCTAA-----GTT--G-ACT---TATCAT----T--ATGATTTCTACCC--CTCGCCATCCC-------------------------TCCA--CACAAAAA---C-------------------------------------------------------------------------------CCCAGACCGGCGCTCAAGAGCTGCAGAACACAACCACAGAGAGCACTGCATAGAG----SizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------------------------------------------TAATTGGCTAACAAACAAACAAAAATCACACACAC----------ATT-------------------------------------TAATGTAAAACCGA------------GAA-----------------------CTGCATTTTACT----------------TTTACC-ATTT---G-AA-----AT--TTTAA-----GTT--G-ACT---TATCGT----T--ATGATTTTTACCC--C-CGCTA---------------------------TCCCCACACACAAAAT---C-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCTTAGAA----SizeHit CountTotal NormTotal
No Reads
droEug1
CTGTA------------------------------------------------------------------------------------ACTAATTGGCTAACAAACA--CAAACA-CAAACACAC----------ATT-------------------------------------TAATGTAAAAACGA------------AAA-----------------------TTGCATTTTACT----------------TTTAAC-ATTT---G-AA-----AT--TTTAA-----GTTTTGTACT---TATCAT----T--ATGATTTCTGCCC--CTCGTTA---------------------------TCCCCA--CACAAAAT---A-------------------------------------------------------------------------------CTTAGAACGGCGCTCAAGAGCTGCAGAATACAACCACAGAGAGCACTGCATAAAA----SizeHit CountTotal NormTotal
No Reads
dm3
CTGTG------------------------------------------------------------------------------------ACTAATTGGCTAACAAGCAA-C-------ACACACAC----------ACT-------------------------------------TAATTTACAACCGA------------AAC-----------------------CAGCATTTTGCT----------------TTCATCCCTTC---G-ATT---TATTTTTGAA-----GTT--GTACT---TACGTT----A--ATGATTTCTACCCCCCTCGCCATGTT-----------------------TTCCCATGTTCA-AAT---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCACAGAGAGCACTGCAT........22110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACAGAGAGCACTGC..........1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCACAGAGAGCACTGCATAGAA----2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAGCTGCAAAATACAACCACA.....................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................T---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGC...................................2614.0040000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACAACCA.......................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACCACAGAGAGCAC.............2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACAACCAC......................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACAGAGAGCACTGCAT........2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAAGAGCTGCAAAAT..............................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACAACC........................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACTGCATA.......2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010010000000
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACAACCACAGAGAGCAC.............2113.0030000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCA..................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CCCATGTTCA-AAT---T-------------------------------------------------------------------------------CCTAG......................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................T---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCAA.................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCACAGAGAGCACTGCATAGA.....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGAGCTGCAAAATACAACC........................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACCACAGAGAGC...............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AT---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAG.......................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGC...................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACAGAGAGCACTGCA.........1812.0020000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATTTTGCT----------------TTCATCCCTTC---G-ATT---T.......................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACAACCACAGAGAGCACT............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGAACGGCGCTCAAGAGCT.....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACAACCACAGAGAGCACT............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................TTC---G-ATT---TATTTTTGAA-----GTT--GTACT---............................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACT............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATACAACCACAGAGAGCACT............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACAACCACAGAGAGC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................T-----------------------TTCCCATGTTCA-AAT---T-------------------------------------------------------------------------------CCTAGAACGGC................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACTGCATAGA.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAGCTGCAAAATACAAC.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTTTTGAA-----GTT--GTACT---TACG........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAGCTGCAAAAT..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................T---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGC......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAAGAGCTGCAAAATAC............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACAACCACAGAGAGCACT............2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGCGCTCAAGAGCTGCAAAAT..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACAACCACAGAGA.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CTAATTGGCTAACAAGCAA-C-------ACACACA.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTGCAAAATACAACCACA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAGCTGC...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGCTCAAGAGCTGCA..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATT---TATTTTTGAA-----GTT--GTACT---TACGTT----..................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAAGAGC......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGCGCTCAAGAGCTGC...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCACAGAGAGCACTGC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCACAGAGAGCACTGCATA.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATACAACCACAGAGA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CCCATGTTCA-AAT---T-------------------------------------------------------------------------------CCTAC......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CAACCGA------------AAC-----------------------CAGCATTTTGC...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................TC---G-ATT---TATTTTTGAA-----GTT--GT..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGAGCACTGCATAGA.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACAACCACAGAGAGCA..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCACAGAGAGCACTG...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACCACAGAGAGCACTGCATA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTTTGCT----------------TTCATCCCTTC---G-..............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGTG------------------------------------------------------------------------------------ACTAATTGGCTAACAAGCAA-C-------AC......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAGAACGGCGCTCAAGA........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCA-AAT---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGC......................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGAA-----GTT--GTACT---TACGTT----A--A..............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAAAATACAACCACA.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACAGAGAGCACTGCATA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGAGCTGCAAAATACAA..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................A-----GTT--GTACT---TACGTT----A--ATG............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACAACCACAGAG..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGCAAAATACAACCACA.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAGCTGCAAAC...............................2311.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................T---TACGTT----A--ATGATTTCTACCCCC................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCACAGAGAGCACTGCATA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACTG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAGCTG....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TT-----------------------TTCCCATGTTCA-AAT---T-------------------------------------------------------------------------------CCT........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGCTCAAGAGCTGCA..................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AT---T-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCT.....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................GA------------AAC-----------------------CAGCATTTTGCT----------------TTCATCCCTTC---G-..............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGCAAAATACAAC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A--ATGATTTCTACCCCCCTCGC...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCACAGAGAGCACTGCA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAAGAGCTG....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACCACAGAGAGCAC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCACAGAGAGCACTGCAT........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGTG------------------------------------------------------------------------------------ACTAATTGGCTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AATTGGCTAACAAGCAA-C-------ACAC....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACAGAGAGCACTGCATAG......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CATCCCTTC---G-ATT---TATTTTTGA...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAACGGCGCTCAAGAGCTGCAAAA...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTGCAAAATACAAC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAAGAGCTGC...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................ACCGA------------AAC-----------------------CAGCATTTTGCT----------------T.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCATTTTGCT----------------TTCATCCCTTC---................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACCACAGAGAGCACTG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAGCTGCAAA................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAGCTGCAAAA...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGAGAGCACTGCATAGA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCTGCAAAATACAACCACAGAGA.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACAACCACAGAGAGCACTGCA.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACCACAGAGAGCA..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droSim2
CTGTG------------------------------------------------------------------------------------ACTAATTGGCTAACAAACAA-CACACA-CACACACGC----------ACC-------------------------------------TAATTTGAAACCGA------------AAC-----------------------CCGCATTTTGCT----------------TTCAACCATTC---G-AG-----ATTCTTTAA-----GTT--GTACT---TACGTT----T--ATGATTTCTACCC--CTCGCCATGTT-----------------------TTCCCACGTTCA-AAT---T-------------------------------------------------------------------------------CCCAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACAACCACAGAGAGCACTGCA.........2913.00300000003000000000
...............................................................................................................................................................................................................................................T----------------TTCAACCATTC---G-AG-----ATTCTTTAA-----GT.......................................................................................................................................................................................................................................2612.00200000020000000000
................................................................................................................................................................................................................................................................TTCAACCATTC---G-AG-----ATTCTTTAA-----GTT--....................................................................................................................................................................................................................................2612.00200020000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCACAGAGAGCACTGCATAGAA----2712.00200000002000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCACAGAGAGCACTG...........2011.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACT............2011.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................TTCTACCC--CTCGCCATGTT-----------------------TTCCCACGT.....................................................................................................................................................2811.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACCACAGAGAGCACTGCAT........2511.00100000000000010000
............................................................................................................................................................................................................................................................................................TTAA-----GTT--GTACT---TACGTT----T--ATGATT.........................................................................................................................................................................................................2511.00100000010000000000
................................................................................................................................................................................................................................................................TTCAACCATTC---G-AG-----ATTCTTTAA-----GT.......................................................................................................................................................................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCA-AAT---T-------------------------------------------------------------------------------CCCAGAACGGCGCT.............................................2111.00100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................AAT---T-------------------------------------------------------------------------------CCCAGAACGGCGCTCAAGAGC......................................2511.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................T---T-------------------------------------------------------------------------------CCCAGAACGGCGCTCAAGAGC......................................2311.00100000001000000000
..............................................................................................TTGGCTAACAAACAA-CACACA-CACACA...................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...TG------------------------------------------------------------------------------------ACTAATTGGCTAACAAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.................................................................................................................................................................................................................................................................................................................................GATTTCTACCC--CTCGCCAT........................................................................................................................................................................................1911.00100010000000000000
..........................................................................................................................................................................................................................................TTTGCT----------------TTCAACCATTC---G-AG-----A......................................................................................................................................................................................................................................................2111.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGAACGGCGCTCAAGAGCTGCAAAA...............................2811.00100000001000000000
.........................................................................................................................................................................................................................................................................TC---G-AG-----ATTCTTTAA-----GTT--GTACT---TACGTT----..................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................................................................................................................................................ATTTTGCT----------------TTCAACCATTC---G-AG-----ATT....................................................................................................................................................................................................................................................2511.00100010000000000000
..........................................................................................................................................................................................................................................................................C---G-AG-----ATTCTTTAA-----GTT--GTACT---............................................................................................................................................................................................................................2111.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACAACCACAGAGAGCAC.............2511.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................GTT----T--ATGATTTCTACCC--CT..............................................................................................................................................................................................1911.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................GATTTCTACCC--CTCGCCATGT......................................................................................................................................................................................2111.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGCTCAAGAC.......................................1560.33200000000020000000
droSec2
TTTTAG-T-------------------------------------------------------------TTTTATCTAGCTAACCAGTGACTAATTGGCTAACAAACAA-CACACA-CACACACGC----------CTC-------------------------------------TAATTTAAAACCGA------------AAC-----------------------CAGCATTTTGCT----------------TTCAACCATTC---G-AG-----ATTTTTTAA-----GTT--GTACT---TACGTT----T--ATGATTTCTACCC--CTCGCCATGTT-----------------------TTCCCACGTTCA-AAT---T-------------------------------------------------------------------------------CCCAGAACGGCGCTCAAGAACTGCAAAATACAACCACAGAGAGCACTGCATAGAA----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACTGC..........2218.0080260
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACT............2015.0050140
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACCACAGAGAGCACTGC..........2313.0030030
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACAGAGAGCACTGC..........1811.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACCACAGAGAGC...............1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACAACCACAGAGAGCACTG...........2611.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCACAGAGAGCACTGC..........2111.0010001
......................................................................................................................................................................................................................................................................CATTC---G-AG-----ATTTTTTAA-----GTT--....................................................................................................................................................................................................................................2011.0010100
................................................................................................................................................................................................................................................................TTCAACCATTC---G-AG-----ATTTTTTAA-----GTT--....................................................................................................................................................................................................................................2611.0010010
........................................................................................................................................................................................................................................ATTTTGCT----------------TTCAACCATTC---G-AG-----ATT....................................................................................................................................................................................................................................................2511.0010100
.......................................................................................................................................................................................................................................................................................................................T----T--ATGATTTCTACCC--CTCGCCATGTT-----------------------..............................................................................................................................................................2611.0011000
.........................................................................................................................................................................................................................................TTTTGCT----------------TTCAACCATTC---G-A.............................................................................................................................................................................................................................................................2011.0011000
.....................................................................TTTTATCTAGCTAACCAGTGACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACTGCAAAATACAACCACAGAG..................2711.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................TCA-AAT---T-------------------------------------------------------------------------------CCCAGAACGGCGCT.............................................2111.0011000
droYak3
CTT-AC------------------------------------------------------------------------------CTGTGACTAATTGGCTAACAAA---------------CACAC----------ATT-------------------------------------TAATTTAAACCCGA------------AAC-----------------------CCGCATTTTACT----------------TTCAACCATTG---TAAA-----AT--TTTAT-----GTT--ATACT---TATGTT----T--ATGATTTCTACCC--CGCGCTATGT-------------------------TCCCA--CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACAACCACAGAGAGCACTGCA.........2511.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................A--CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACGGC................................................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACGGCGCT.............................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACCACAGAGAGCACT............2311.00100000010000
..........................................................................................................................................................................................................................................................................................................ATACT---TATGTT----T--ATGATTTCT......................................................................................................................................................................................................2111.00101000000000
......................................................................................................................................................................................................................................................................................................TT--ATACT---TATGTT----T--ATGAT..........................................................................................................................................................................................................1911.00101000000000
..........................................................................................................................................................................................................AAC-----------------------CCGCATTTTACT----------------TTCAACCATTG---................................................................................................................................................................................................................................................................2611.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACAACCACAGAGAGCA..............2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................CCCA--CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACGG.................................................2211.00101000000000
.......................................................................................................AAA---------------CACAC----------ATT-------------------------------------TAATTTAAACCCGA------------AAC-----------------------..........................................................................................................................................................................................................................................................................................................2811.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACAACCACAGAGAGCACT............2611.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGCGCTCAAGAGCTGCAAAATA.............................2611.00100000010000
....................................................................................................AACAAA---------------CACAC----------ATT-------------------------------------TAATTTAAACC...................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACCACAGAGAGCACTGC..........2511.00100000010000
....................................................................................................AACAAA---------------CACAC----------ATT-------------------------------------TAATTTAAACCCGA------------A...................................................................................................................................................................................................................................................................................................................................2911.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACCACAGAGAGCACTGCAT........2511.00100000010000
.................................................................................................................................................................................................................................................................................................................................................GCTATGT-------------------------TCCCA--CACA-AAT---C-------------------------------------------------------------------------------CCTAG......................................................2511.00101000000000
.............................................................................................................................................................................................................................................ACT----------------TTCAACCATTG---TAAA-----AT--TTTAT-----GTT--....................................................................................................................................................................................................................................2811.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGCAAAATACAACCACAGAG..................2511.00100000010000
droEre2
------------------------------------------------------------------------------------------------------------------------ACACAC----------ATT-------------------------------------T-----AAAAACGA------------AAA-----------------------CCGCATTTTACT----------------TTCAACCATTT---TAAG-----AT--TTTAA-----GTT--GTACT---TATGTT----T--ATGATTTCTACCC--CTCGCTATGT-------------------------TCCCA--CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCAAAATACAACCACAGAGAGCACTGCATAGAA----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACAACCACAGAGAGCACTGC..........2512.0020000110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGCTCAAGAGC......................................1811.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCACAGAGAGCACTGCA.........2211.0010000010
..............................................................................................................................................................................................................................................................................................................T---TATGTT----T--ATGATTTCTACCC--CTCGC...........................................................................................................................................................................................2611.0010000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACCACAGAGAGCACTGC..........2211.0010001000
...................................................................................................................................................................................................................................................................AACCATTT---TAAG-----AT--TTTAA-----GT.......................................................................................................................................................................................................................................2111.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACAACCACAGAGAGC...............2211.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACAGAGAGCACTGCATAGA.....2211.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................TCCCA--CACA-AAT---C-------------------------------------------------------------------------------CCTAGAACG..................................................2211.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATACAACCACAGAGAGCACT............2411.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACAGAGAGCACTGCATA.......2111.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATACAACCACAGAGAGCACTGC..........2611.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACAACCACAGAGAGC...............2311.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATACAACCACAGAGAGCACTGC..........2711.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................AT---C-------------------------------------------------------------------------------CCTAGAACGGCGCTCAAGAGCTGCA..................................2811.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACAACCACAGAGAGCACT............2611.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTGCAAAATACAACC........................2111.0011000000
.......................................................................................................................................................................................................................................................................................................................T----T--ATGATTTCTACCC--CTCGCT..........................................................................................................................................................................................2111.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCACAGAGAGCACTGC..........2011.0010000010

Generated: 05/21/2015 at 04:21 PM