ID:

dvi_21027

 Coordinate:

scaffold_13049:22829217-22829367 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.5 -9.4 -9.3 -9.0

Flybase annnotation

CDS [Dvir\GJ13995-cds]; exon [dvir_GLEANR_13843:2]; intron [Dvir\GJ13995-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCCGGCAGCGCAGAGCACGGAACAAACACAGGCACCAGTTCCAATGTCCAGTGCTTAAACGAACTCAGGAGCTCAGCTATGTTAAACAATTTCAACTTCTGTACGTTAATTGCGACTTTGTATAAATTGTCGTTAAGTTTATCGTCTGATTGTTTTTATGATTCAAATTGCGAGGAAGCGAAATCACAAGTGACAACTGTCGAAACATTTCACAGCGAAATGCATTAATAAACATAACTATACATTCACAT
*************************************************************..................((....(((((((..((....((.(((.....)))))...))..)))))))............))*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 SRR060664
9_males_carcasses_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 V047
embryo
 M027
male body		 SRR060655
9x160_testes_total
 M061
embryo
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 V116
male body
..............................................................................................................................TTGTCGTTAAGTTTATCG........................................................................................................... 18 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CTTTGTATAAATTGTCGTTAAGT................................................................................................................. 23 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GCGAGGAAGCTAAATCACAAGTGAC......................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GGCAGCGCAGAGCACGGA...................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAATTGTCGTTAAGTTTATCGTCT........................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGAAACATTTCACCGCGA................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................CAATGTCCAGTGCTTAAACG.............................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AACTCAGGAGCTCAGCTATGTT........................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTTATGATTCAAATTGCGAGGAAGCGA...................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GTCCAGTGCTTAAACGAA............................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................GTTTATCGTCTGATTGTTTTTATT........................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................CAACTTCTGTACGTTAATTGCGAC....................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ACCTTCTGTACTTTAATTGCGA........................................................................................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................AGTGACAACTGTCGAAACATT.......................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................AAACATTTCACAGCGAAAT.............................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACAACTGTCGAAACATTTCACAGCGA................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AATTGCGAGGAAGCGAAATCACAAGT............................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GCAGAGCACGGAACAAACACAG............................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CCAATGTCCAGTGCTTAAACGAACTC......................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............AGCACGGAAAAAACACAGGGA......................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................CTTTGTATAAATTGTCGTT..................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TGTCGAAACATTTCACAGCGA................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATTGCGAGGAAGCGAAAT................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GTCCAGTGCTTAAACGAACTCAGGA..................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AACTCAGGAGCTCAGCTCTGTT........................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................ATTTCAACTTCTGTACGTTAATTGCGAC....................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CTTTGTATAAATTGTCGTTAAGTTT............................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TCACAGCGAAATGCATTAATAAACATAAC............. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GTCGTTAAGTTTATCGTCTGATTG................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CTCAGGAGCTCAGCTATGTTA....................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TCTGATGGTGTTTATGGTTCA...................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGATGCAAATTGGGAGGA........................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................AGACAATTTCAACTCGTGTA.................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGGCCGTCGCGTCTCGTGCCTTGTTTGTGTCCGTGGTCAAGGTTACAGGTCACGAATTTGCTTGAGTCCTCGAGTCGATACAATTTGTTAAAGTTGAAGACATGCAATTAACGCTGAAACATATTTAACAGCAATTCAAATAGCAGACTAACAAAAATACTAAGTTTAACGCTCCTTCGCTTTAGTGTTCACTGTTGACAGCTTTGTAAAGTGTCGCTTTACGTAATTATTTGTATTGATATGTAAGTGTA
***********************************************************************************************************..................((....(((((((..((....((.(((.....)))))...))..)))))))............))************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body		 V047
embryo
 SRR060662
9x160_0-2h_embryos_total
 M047
female body
..........GTCTCGTGCCTTGTTTGTGT............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................GTGGAAGACATGGAATTAAGG.......................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0
..............................................AGGTAACGAATTTGCGTGA.......................................................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0 0 0
........................................................CTTGCTTGTGTCCTGGAGTC............................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................CTGTTGCCAGCTTCTTAAAGTG...................................... 22 3 9 0.11 1 0 0 0 0 1 0 0
......................................................AACTTGCTTGTGTCCTGGA.................................................................................................................................................................................. 19 3 13 0.08 1 0 0 0 0 0 1 0
.....................................................................................................................................ATTCAACTAGCAGCCTGACA.................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:22829167-22829417 + dvi_21027 GCCG-----------------------GCAG--CGC---A----------------------GAGCACGGAACAAACACAG---------------GCACCAGTT---------------CCA---ATGTCCAGTGCTTA-------------------------------------------------------------------AAC--GA-ACTCAG------------GAGCTCAGCTATGTTAAACAATTTCAACTTCTGTACGT--------------------------------T--------AA----------------------------------TTGC-GACTTTGTATAAATTGTCGTTAAGTTT-----------------------------------ATCG---TCTGATT----G-TTTT-TA----TGATTCAAATTGCGAGGAAGCGAAATCACAAGTGACAAC----TGTCGA-AACATTTCACAGCG----A---------------------AA-----TGCATTAAT--------------------------AAACATAACTATACATTCACA-------------------T
droMoj3 scaffold_6680:17445970-17446259 + GCCA-----------------------GCAA--CAGCAGC----------------------CAGCCCTGAACAAACACAGCTAGGAGCACCACCACAAGCAGCAGTAGCCGCACCACCACCTGCGATGTCAAGTGCTTAGG---------------------------------------------------------------------------------TTCCACTCACCAGAT-ACTTGCGTTAACCATTTTGAACTTCAGTACGT-----TGTTG------------------------------------------------------------------------GCGACTGCATAAATTGTCGTTAAGTTT----------------------------------AATAA---TGTGATT----T-GTTTTTA----TGATTCTAATTGCGATGAACCGAAATCACAAGTGACAGC----TGTC-A-AACATTTCAGTGCA----A----AATGCATAAATATAAA----------------------GCG----------------------ATACATTTACATTTACA-------------------T
droGri2 scaffold_15110:18105553-18105824 + AATC-----------------------ACAA--CAA---A----------------------CGCCACCGG-----TAGCA---------------GCATCGGCC---------------ACA---ACATCAAGTGCTTGAGCCCAACAACAACAGTAACTGACAACAACTGGACAACAACAACAGCTAACAACTAACTATAACTGA-------------------------------------AGTTAATTAACTTGAA----------------------------------------------------------------------------------------------------------TTGT------------ATTT--------CTCTGCGACTCTGTTAAGTTTATCA---TGTGATGATTCTGTTTTTT--A-ATGATTCTGATTGCAATGTTTCGAAATCACAAGTGACAAAC---TGTC-AAACA---------------A---------------------AT-----TGCATTAAT--------------------------AAATAATACAATATATATATA-------------------A
droWil2 scf2_1100000004511:2786391-2786706 + AGCAGCA--GCAC------------CACC-----AC---C----------------------AAGCCATGACCA----------------------CAACCAC------------------------------------------------------------------------------------TCTCAACCGGCCACAACTCAGGCAA---ACTAAA-----------------------------------------TCAAAACGGGGGGATGTAGTGGCTGGACTGGGG-------CGAATTGCGGGTGAAGTATTCGAGAAAAAAAGGGAACTGGCGGAAATAACAAAAAC--AAAATATTGTCGTTAAGTTTTCT---------ACATCT-----------TCGTCTTTTT---TCCGTTC----T-TTTTTT------TTTT------TTGAT-AACCAAAATCACAAGTGAATGGCGG----------------------------------------ATATATATATTCATATGTCTATATGTAAAGCCAAGTAACTAAATCTTTAGAAAAAAAACAAAAAACCTGCA-------------------A
dp5 XR_group6:11768754-11768887 - TCTG-----------------------GCAG--CGA---A----------------------CAGCAGCA----------G---------------CAACCGGCT---------------ACAAC-------------------------------------------------------------------------------TCAGGCCGGCAACTAAGACCACATC-----------------------------CACATCTGAGCGGCGCTGTGTTG----------------------------------------------------------------------T-CGAATTGGACAAATTGTCGTTAAGCTTTTATCT-----------------------T------TCA---TCTGATT----A-TTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_20:1690088-1690221 - TCTG-----------------------GCAG--CGA---A----------------------CAGCAGCA----------G---------------CAATCGGCT---------------ACAAC-------------------------------------------------------------------------------TCAGGCCGGCAACTAAGACCACATC-----------------------------CACATCTGAGCGGCGCTGTGTTG----------------------------------------------------------------------T-CGAATTGGACAAATTGTCGTTAAGCTTTTATCT-----------------------T------TCA---TCTGATT----A-TTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:19348433-19348550 - ACCG-----------------------GC-----GG---GCGGTAACGGCAACAGCATCGC-AGGAGG---TGATCCAACA---------------GTGGCGGGA---------------GCTAC-------------------------------------------------------------------------------TCTGCCCAGCAACTAAGACTTTAAC-------------------------------------------------------------TGA-G-------CTGAT---------------------------------------------------TGGACAAACTGTCGTTAAGCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000394438:690-782 + ATTT------CAAAGATGCAGATCCCGAT-----AA---C----------------------GGATAC---TGAAACATAC---------------ACTCTGACA---------------GCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATGCGGTACTTAT------------------------------------------------------------------------------------------------------------------------------------ATATATACACATATATAC--------------------------------------------------------------ACA-------------------C
droKik1 scf7180000302686:354769-354985 + TC-----------------------CAGC-----GG---T----------------------GGACAA---CGAACCA-------------------AGCCAG------------------------------------------------------------------------------------------------------CCAGCCGGAAACT--GACTTGAAT-------------------------------------------------------------TAG-G-------C----------------------------------------------TGCTAAAACTGGACAAATTGTCGTTAGGCTTTTATCTGTATCTGTATCT-----------GCGAGTATCA---TCCGATT----C-TTTTGTA----TGATT------GCTGT-AGCGAAAATCAAATG-------------TT-G-GCG-----------A-AGAGCTACATGCAAAAATGTGTACAT-----TGCATTC----------------------------------------------ATAACAATAATCTAAATTAAATA
droFic1 scf7180000454113:2398794-2399026 - AACAGTGCTGCTC------------CAGC-----GC---C----------------------AGAAAA---CGAACCATCG---------------GGACCGGCA---------------ATACA-------------------------------------------------------------------------------CCAGGTCGGCAACTAAGACTACAAC-------------------------------------------------------------TGG-G-------CTAATTGACCAA----------------------------------CTGCTAAACCTGGACAAACTGTCGTTAAGCTTTTATTT-----------------------TCGAGGATCA---TCCGATT----G-TTTTGTA----TGACT------GCGTT-AGCAAGAATCATAAGTGGCG------------------------------------CATGCAAGAATATGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAATTC
droEle1 scf7180000491193:4192557-4192792 + ACCG-----------------------G-----------C----------------------AGACAA---TGAAACATCG---------------GCACCGGCA---------------ACACA-------------------------------------------------------------------------------CCAGGCCGGCAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATTGACCAA----------------------------------CTGCTAAACCTGGACAAATCGTCGTTAAGCTTAT--TT-----------T-----------GCGAGTATCA---TCTGATT----G-TTTTGAGTG-ATGATT------GCGCT-AGCAAGAATCACAAGTGGCGCGGAGGTGTG-G-GCC-----------A--CAGCTGCATGCAAAAATGTGTACAT-----TGCATTC----------------------------------------------ATAACAATAATCTAAAT------
droRho1 scf7180000773422:11265-11490 - GCTC---------------------CTGC-----GG---C----------------------AGACAA---CGAACCATCG---------------GCACCGGCA---------------ATAAA-------------------------------------------------------------------------------CCAGGCCGGCAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATTGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------T-----------GCGAGTATCA---TCTGATT----G-TTTTGTATG-ATGATT------GCGTT-AGCATGAAACACAAGTGGCAAGAGGAGGT----GCC---------------AGCTGCATTCAAAAATGTGTACAT-----TGCATTC----------------------------------------------ATAA-------------------
droBia1 scf7180000302428:1389186-1389407 - TC-----------------------CAGC-----GG---G----------------------CGAGAA---CGAACCATCG---------------GGACCGGCA---------------GTCCA-------------------------------------------------------------------------------CCAGGCGGGCAACTAAGACTTCAAG-------------------------------------------------------------TGG-G-------CCAATTGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATGT-----------------------TTGAGAATCA---ACTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAAGAATCACAAGTGGCGCGAAGACGTT-G-GCC---------------AGCTGCATGCAAAAATATGTACAT-----TGCATTC----------------------------------------------ATAT-------------------
droTak1 scf7180000415420:174688-174917 - GCCA-----------------------CCAGTTCAACAACCAGCAGCACCAGCACCACCGCCAGAAAA---CGAACCATCG---------------GGAGCGGCA---------------GTCAA-------------------------------------------------------------------------------CCAGACAGGCAACTAAGACTTCAA------------------------------------------------------------------------------------------------------------------------CTGCTTCACCTGGACAAATTGTCGCTAAGCTTTTATGT------GTATGT-----------TCGAGAATCATCTTCTGATT----G-TTTTGTATGGATTA------------------------------------------TT-G-GCC-----------AGGGAGCTGCATGCAAAAATATGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAAT------
droEug1 scf7180000409466:5028855-5029090 - TC-----------------------CAGC-----GG---C----------------------AGAAAA---CGAACCATCT---------------GGACCGGCA---------------ATAAA-------------------------------------------------------------------------------TCAGGCCGGAATCTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTACTTGACCAA----------------------------------CTGCTACACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCAAGA-----------ATT----A-TTTTGTA----TGATT------GCGTT-ACCAAGAATCACAAATAGCGCGAAAATGTT---ACC---------------AGAAACGTGCAAAAATATGTACATTGAT-TGCATTC----------------------------------------------ATAAAAATAATCTAAACTAATTA
dm3 chr3L:19919917-19920166 + GCTG------CTC------------CGGC-----GG---C----------------------AGGCAACGACGAACTATCC---------------GGACCGGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCTAC-------------------------------------------------------------TGG-GCCAACTGCTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTG---TTAAGCTTTTATTT-----------------------TCGAGAATCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAAATATCACAAGTGGCGCGATTGGTTC-G-GCC---------------ATCTGCATGCAAAGATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---
droSim2 3l:19513193-19513438 + GCTG------CTC------------CGGC-----GC---A----------------------AGGCAATGATGAATTAGCC---------------GGACCGGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCGAGAATCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAGATATCACAAGTGGCGCAATTCGGTT-G-GCC---------------AGCTGCATGCAAAGATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---
droSec2 scaffold_29:564494-564739 + GCTG------CTC------------CGGC-----GC---A----------------------AGGCAATGATGAATTAGCC---------------GGACCGGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTA-----------------------TCGAGAATCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAGATATCACAAGCGGCGCAATTCGGTT-G-GCC---------------AGCTGCATGCAAAGATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---
droYak3 v2_chr3L_random_210:2512-2752 + C----------TC------------CAGC-----GG---G----------------------AGGCAACGACGAATCATCG---------------GGACCGGCA---------------GTAAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCTAC-------------------------------------------------------------TGG-G-------CTAATAGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCGAGAGTCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAAGTATCACAAGTGGCGCGATTGGGTT-G-GCC---------------AGCTGCATGCAA-GATGTTTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---
droEre2 scaffold_4784:19657749-19657993 + GCTG------TTC------------CAGC-----GG---C----------------------AGGCAACGATGAATCATCG---------------GGACCGGCA---------------GTAAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCTAC-------------------------------------------------------------TGA-G-------CTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCGAGAATCA---TCTCATT----G-TTTTGTA----TGATC------GCGAT-AGCAAATATCACAAGTGGCGCGATTGGGTT-G-GCC---------------AGCTGCACGCAA-GATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCCG-----------------------GCAG--CGC---A----------------------GAGCACGGAACAAACACAG---------------GCACCAGTT---------------CCA---ATGTCCAGTGCTTA-------------------------------------------------------------------AAC--GA-ACTCAG------------GAGCTCAGCTATGTTAAACAATTTCAACTTCTGTACGT--------------------------------T--------AA----------------------------------TTGC-GACTTTGTATAAATTGTCGTTAAGTTT-----------------------------------ATCG---TCTGATT----G-TTTT-TA----TGATTCAAATTGCGAGGAAGCGAAATCACAAGTGACAAC----TGTCGA-AACATTTCACAGCG----A---------------------AA-----TGCATTAAT--------------------------AAACATAACTATACATTCACA-------------------TSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................TTGTCGTTAAGTTT-----------------------------------ATCG---.....................................................................................................................................................................................................1812.002000000000000000000000000000000000000000200000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CTTTGTATAAATTGTCGTTAAGT.................................................................................................................................................................................................................................................2312.002001100000000000000000000000000000000000000000000000000000000000
...G-----------------------GCAG--CGC---A----------------------GAGCACGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AAATTGTCGTTAAGTTT-----------------------------------ATCG---TCT..................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................CA---ATGTCCAGTGCTTA-------------------------------------------------------------------AAC--G......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................A-ACTCAG------------GAGCTCAGCTATGTT...................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TA----TGATTCAAATTGCGAGGAAGCGA......................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................GTCCAGTGCTTA-------------------------------------------------------------------AAC--GA-A...................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GTTT-----------------------------------ATCG---TCTGATT----G-TTTT-TA----TT...........................................................................................................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................CAACTTCTGTACGT--------------------------------T--------AA----------------------------------TTGC-GAC.......................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGACAAC----TGTCGA-AACATT.....................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AACATTTCACAGCG----A---------------------AA-----T...........................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC----TGTCGA-AACATTTCACAGCG----A---------------------...................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCGAGGAAGCGAAATCACAAGT............................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................GC---A----------------------GAGCACGGAACAAACACAG---------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................CCA---ATGTCCAGTGCTTA-------------------------------------------------------------------AAC--GA-ACTC................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CTTTGTATAAATTGTCGTT.....................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGA-AACATTTCACAGCG----A---------------------...................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGAGGAAGCGAAAT...................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................GTCCAGTGCTTA-------------------------------------------------------------------AAC--GA-ACTCAG------------GA................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATTTCAACTTCTGTACGT--------------------------------T--------AA----------------------------------TTGC-GAC.......................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CTTTGTATAAATTGTCGTTAAGTTT-----------------------------------............................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGCG----A---------------------AA-----TGCATTAAT--------------------------AAACATAAC................................2911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GTCGTTAAGTTT-----------------------------------ATCG---TCTGATT----G-........................................................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................CTCAG------------GAGCTCAGCTATGTTA..................................................................................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
droMoj3
GCCA-----------------------GCAA--CAGCAGC----------------------CAGCCCTGAACAAACACAGCTAGGAGCACCACCACAAGCAGCAGTAGCCGCACCACCACCTGCGATGTCAAGTGCTTAGG---------------------------------------------------------------------------------TTCCACTCACCAGAT-ACTTGCGTTAACCATTTTGAACTTCAGTACGT-----TGTTG------------------------------------------------------------------------GCGACTGCATAAATTGTCGTTAAGTTT----------------------------------AATAA---TGTGATT----T-GTTTTTA----TGATTCTAATTGCGATGAACCGAAATCACAAGTGACAGC----TGTC-A-AACATTTCAGTGCA----A----AATGCATAAATATAAA----------------------GCG----------------------ATACATTTACATTTACA-------------------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTA----TGATTCTAATTGCGAT.............................................................................................................................................................2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA----TGATTCTAATTGCGATGAACCGA......................................................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................GTACGT-----TGTTG------------------------------------------------------------------------GCGACTGC..................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCGAAATCACAAGTGACAGC----..................................................................................................................................2311.001100000
.........................................................................AAACACAGCTAGGAGCACCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
...............................................................AGCCCTGAACAAACACAGCTAGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCGAAATCACAAGTGACAGC----T.................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAGTGACAGC----TGTC-A-AA.........................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTA----TGATTCTAATTGCGATGAAC.........................................................................................................................................................2511.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTAATTGCGATGAACCGA......................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA----TGATTCTAATTGCGATG............................................................................................................................................................2011.001100000
droGri2
AATC-----------------------ACAA--CAA---A----------------------CGCCACCGG-----TAGCA---------------GCATCGGCC---------------ACA---ACATCAAGTGCTTGAGCCCAACAACAACAGTAACTGACAACAACTGGACAACAACAACAGCTAACAACTAACTATAACTGA-------------------------------------AGTTAATTAACTTGAA----------------------------------------------------------------------------------------------------------TTGT------------ATTT--------CTCTGCGACTCTGTTAAGTTTATCA---TGTGATGATTCTGTTTTTT--A-ATGATTCTGATTGCAATGTTTCGAAATCACAAGTGACAAAC---TGTC-AAACA---------------A---------------------AT-----TGCATTAAT--------------------------AAATAATACAATATATATATA-------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................TAACTGA-------------------------------------AGTTAATTAACT...........................................................................................................................................................................................................................................................................................................................................................................1911.00110
..................................................................................................................................................................................................................................................................AA----------------------------------------------------------------------------------------------------------TTGT------------ATTT--------CTCTGCGA.........................................................................................................................................................................................................................1811.00110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAAGTGACAAAC---TGT...............................................................................................................................1911.00110
...................................A---A----------------------CGCCACCGG-----TAGCA---------------GCATCGGCC---------------ACA---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101
...................................................................................................................................................................................ACAACAGCTAACAACTAACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..........................................................................................................................................................................................CTAACAACTAACTATAACTGA-------------------------------------AGTT...................................................................................................................................................................................................................................................................................................................................................................................2511.00110
...................................................................................................................................AAGTGCTTGAGCCCAACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
droWil2
AGCAGCA--GCAC------------CACC-----AC---C----------------------AAGCCATGACCA----------------------CAACCAC------------------------------------------------------------------------------------TCTCAACCGGCCACAACTCAGGCAA---ACTAAA-----------------------------------------TCAAAACGGGGGGATGTAGTGGCTGGACTGGGG-------CGAATTGCGGGTGAAGTATTCGAGAAAAAAAGGGAACTGGCGGAAATAACAAAAAC--AAAATATTGTCGTTAAGTTTTCT---------ACATCT-----------TCGTCTTTTT---TCCGTTC----T-TTTTTT------TTTT------TTGAT-AACCAAAATCACAAGTGAATGGCGG----------------------------------------ATATATATATTCATATGTCTATATGTAAAGCCAAGTAACTAAATCTTTAGAAAAAAAACAAAAAACCTGCA-------------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................GGCTGGACTGGGG-------CGAATTGC.....................................................................................................................................................................................................................................................................................................................2112.00200110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAGTGAATGGCGG----------------------------------------AT.........................................................................................1812.00202000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTAAAGCCAAGTAACTAAAT...............................................2412.00200002
.......................................................................................................................................................................................................................................................................................................................................AAAAAAGGGAACTGGCGGA.................................................................................................................................................................................................................................................................................1911.00100100
.........................................................................................................................................................................................................................................................................................................................................................................AAATATTGTCGTTAAGTTTTCT---------ACAT...............................................................................................................................................................................................................................2611.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGTGAATGGCGG----------------------------------------ATATATAT...................................................................................2311.00100001
........................................................................................................................................................................................................................................................................................................................................................................AAAATATTGTCGTTAAGT.................................................................................................................................................................................................................................................1811.00100010
........................................................................................................................................................................................................................................................................................GTGGCTGGACTGGGG-------CGAAT........................................................................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................................................................................................................................................................................................................CTGGGG-------CGAATTGCGGGTGA...............................................................................................................................................................................................................................................................................................................2011.00100100
...........................................................................................................................................................................................TCTCAACCGGCCACAACTCAGGCAA---....................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
...............................................................................................................................................................................................................................................................................................GACTGGGG-------CGAATTGCGGGT.................................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................................................................................................................................................................................AAAAAAAGGGAACTGGCGGA.................................................................................................................................................................................................................................................................................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAATGGCGG----------------------------------------ATATATAT...................................................................................2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTAAATCTTTAGAAA......................................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTATATGTAAAGCCAAGTAACT...................................................2611.00110000
..................................................................................................................................................................................................................................................................................................TGGGG-------CGAATTGCGGGTGA...............................................................................................................................................................................................................................................................................................................1911.00100010
.......................................................................................................................................................................................................................................................................................................................................AAAAAAGGGAACTGGCGGAAATAACAAA........................................................................................................................................................................................................................................................................2811.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................TTTCT---------ACATCT-----------TCGTCTTTTT---TCCGTT...............................................................................................................................................................................................2711.00100010
...........................................................................................................................................................................................................................................................................................................................................................ATAACAAAAAC--AAAATATTGT.........................................................................................................................................................................................................................................................2111.00100010
........................................................................................................................................................................................................................................................................................GTGGCTGGACTGGGG-------CGAATTGC.....................................................................................................................................................................................................................................................................................................................2311.00110000
.......................................................................................................................................................................................................................................................................................................................................AAAAAAGGGAACTGGCGGAAA...............................................................................................................................................................................................................................................................................2111.00101000
.............................................................................................................................................................................................................................................................................................................................................................................ATTGTCGTTAAGTTTTCT---------ACA................................................................................................................................................................................................................................2111.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAAAGCCAAGTAACTAAAT...............................................2211.00100001
.....................................................................................................................................................................................................................................................................................GTAGTGGCTGGACTGGGG-------CGAATTGC.....................................................................................................................................................................................................................................................................................................................2611.00100010
dp5
TCTG-----------------------GCAG--CGA---A----------------------CAGCAGCA----------G---------------CAACCGGCT---------------ACAAC-------------------------------------------------------------------------------TCAGGCCGGCAACTAAGACCACATC-----------------------------CACATCTGAGCGGCGCTGTGTTG----------------------------------------------------------------------T-CGAATTGGACAAATTGTCGTTAAGCTTTTATCT-----------------------T------TCA---TCTGATT----A-TTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................T---------------ACAAC-------------------------------------------------------------------------------TCAGGCCGGCAACT.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GACAAATTGTCGTTAAGCTTT..............................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................ATC-----------------------------CACATCTGAGCGGCGCTGT......................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................GA---A----------------------CAGCAGCA----------G---------------CAACCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.......................................................................................................CT---------------ACAAC-------------------------------------------------------------------------------TCAGGCCGGCAACTAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................CGAATTGGACAAATTGTCGTTAAGCTTT..............................................................................................................................................................................................................................................2811.0010010000000
.............................AG--CGA---A----------------------CAGCAGCA----------G---------------CAACCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................GCTGTGTTG----------------------------------------------------------------------T-CGAATTGGA.................................................................................................................................................................................................................................................................1911.0010100000000
..................................GA---A----------------------CAGCAGCA----------G---------------CAACCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
droPer2
TCTG-----------------------GCAG--CGA---A----------------------CAGCAGCA----------G---------------CAATCGGCT---------------ACAAC-------------------------------------------------------------------------------TCAGGCCGGCAACTAAGACCACATC-----------------------------CACATCTGAGCGGCGCTGTGTTG----------------------------------------------------------------------T-CGAATTGGACAAATTGTCGTTAAGCTTTTATCT-----------------------T------TCA---TCTGATT----A-TTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................CTAAGACCACATC-----------------------------CACATCTGAGC..............................................................................................................................................................................................................................................................................................................................................................2413.003300000
...........................................................................................................................................................................................................................................................................GCGGCGCTGTGTTG----------------------------------------------------------------------T-CGAATTGGACAA..............................................................................................................................................................................................................................................................2712.002200000
.....................................................................................................................................................................................................................................................................ATCTGAGCGGCGCTGTGT....................................................................................................................................................................................................................................................................................................................................................1812.002200000
....................................................................................................................................................................................................................................C-----------------------------CACATCTGAGCGGCGCTGTGTTG----------------------------------------------------------------------T-C.........................................................................................................................................................................................................................................................................2612.002200000
..................................GA---A----------------------CAGCAGCA----------G---------------CAATCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
..............................G--CGA---A----------------------CAGCAGCA----------G---------------CAATCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
................................................................................................................................................................................................................................................................................................................................................................................GTCGTTAAGCTTTTATCT-----------------------T------TC.........................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................ATCTGAGCGGCGCTGTGG....................................................................................................................................................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................CAAATTGTCGTTAAGCTTT..............................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................ATCTGAGCGGCGCTGTGC....................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................................................................ATCTGAGCGGCGCTGTGTTG----------------------------------------------------------------------T-CGAATT....................................................................................................................................................................................................................................................................2711.001000001
.....................................................................A----------G---------------CAATCGGCT---------------ACAAC-------------------------------------------------------------------------------TCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................................................AAATTGTCGTTAAGCTTTT.............................................................................................................................................................................................................................................1911.001100000
.................................................................................................AATCGGCT---------------ACAAC-------------------------------------------------------------------------------TCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................................CACATCTGAGCGGCGCTGTG.....................................................................................................................................................................................................................................................................................................................................................2011.001000001
droAna3
ACCG-----------------------GC-----GG---GCGGTAACGGCAACAGCATCGC-AGGAGG---TGATCCAACA---------------GTGGCGGGA---------------GCTAC-------------------------------------------------------------------------------TCTGCCCAGCAACTAAGACTTTAAC-------------------------------------------------------------TGA-G-------CTGAT---------------------------------------------------TGGACAAACTGTCGTTAAGCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................GGCAACAGCATCGC-AGGAGG---T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002020000
........................................................................GATCCAACA---------------GTGGCGGGA---------------GCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................CGC-AGGAGG---TGATCCAACA---------------GTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..........................................GTAACGGCAACAGCATCGC-AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................AACAGCATCGC-AGGAGG---TGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.......................................................................................................................................................................................................................ACTAAGACTTTAAC-------------------------------------------------------------TGA-G-------CT...........................................................................................................................................................................................................................................................................................................................2011.001000010
..............................................................AGGAGG---TGATCCAACA---------------GTGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................GACAAACTGTCGTTAAGCTTG..............................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................G-------CTGAT---------------------------------------------------TGGACAAACTGTC........................................................................................................................................................................................................................................................1911.001010000
................................................GCAACAGCATCGC-AGGAGG---T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droBip1
ATTT------CAAAGATGCAGATCCCGAT-----AA---C----------------------GGATAC---TGAAACATAC---------------ACTCTGACA---------------GCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATGCGGTACTTAT------------------------------------------------------------------------------------------------------------------------------------ATATATACACATATATAC--------------------------------------------------------------ACA-------------------CSizeHit CountTotal NormTotal
No Reads
droKik1
TC-----------------------CAGC-----GG---T----------------------GGACAA---CGAACCA-------------------AGCCAG------------------------------------------------------------------------------------------------------CCAGCCGGAAACT--GACTTGAAT-------------------------------------------------------------TAG-G-------C----------------------------------------------TGCTAAAACTGGACAAATTGTCGTTAGGCTTTTATCTGTATCTGTATCT-----------GCGAGTATCA---TCCGATT----C-TTTTGTA----TGATT------GCTGT-AGCGAAAATCAAATG-------------TT-G-GCG-----------A-AGAGCTACATGCAAAAATGTGTACAT-----TGCATTC----------------------------------------------ATAACAATAATCTAAATTAAATASizeHit CountTotal NormTotal
No Reads
droFic1
AACAGTGCTGCTC------------CAGC-----GC---C----------------------AGAAAA---CGAACCATCG---------------GGACCGGCA---------------ATACA-------------------------------------------------------------------------------CCAGGTCGGCAACTAAGACTACAAC-------------------------------------------------------------TGG-G-------CTAATTGACCAA----------------------------------CTGCTAAACCTGGACAAACTGTCGTTAAGCTTTTATTT-----------------------TCGAGGATCA---TCCGATT----G-TTTTGTA----TGACT------GCGTT-AGCAAGAATCATAAGTGGCG------------------------------------CATGCAAGAATATGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAATTCSizeHit CountTotal NormTotal
No Reads
droEle1
ACCG-----------------------G-----------C----------------------AGACAA---TGAAACATCG---------------GCACCGGCA---------------ACACA-------------------------------------------------------------------------------CCAGGCCGGCAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATTGACCAA----------------------------------CTGCTAAACCTGGACAAATCGTCGTTAAGCTTAT--TT-----------T-----------GCGAGTATCA---TCTGATT----G-TTTTGAGTG-ATGATT------GCGCT-AGCAAGAATCACAAGTGGCGCGGAGGTGTG-G-GCC-----------A--CAGCTGCATGCAAAAATGTGTACAT-----TGCATTC----------------------------------------------ATAACAATAATCTAAAT------SizeHit CountTotal NormTotal
No Reads
droRho1
GCTC---------------------CTGC-----GG---C----------------------AGACAA---CGAACCATCG---------------GCACCGGCA---------------ATAAA-------------------------------------------------------------------------------CCAGGCCGGCAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATTGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------T-----------GCGAGTATCA---TCTGATT----G-TTTTGTATG-ATGATT------GCGTT-AGCATGAAACACAAGTGGCAAGAGGAGGT----GCC---------------AGCTGCATTCAAAAATGTGTACAT-----TGCATTC----------------------------------------------ATAA-------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TC-----------------------CAGC-----GG---G----------------------CGAGAA---CGAACCATCG---------------GGACCGGCA---------------GTCCA-------------------------------------------------------------------------------CCAGGCGGGCAACTAAGACTTCAAG-------------------------------------------------------------TGG-G-------CCAATTGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATGT-----------------------TTGAGAATCA---ACTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAAGAATCACAAGTGGCGCGAAGACGTT-G-GCC---------------AGCTGCATGCAAAAATATGTACAT-----TGCATTC----------------------------------------------ATAT-------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCCA-----------------------CCAGTTCAACAACCAGCAGCACCAGCACCACCGCCAGAAAA---CGAACCATCG---------------GGAGCGGCA---------------GTCAA-------------------------------------------------------------------------------CCAGACAGGCAACTAAGACTTCAA------------------------------------------------------------------------------------------------------------------------CTGCTTCACCTGGACAAATTGTCGCTAAGCTTTTATGT------GTATGT-----------TCGAGAATCATCTTCTGATT----G-TTTTGTATGGATTA------------------------------------------TT-G-GCC-----------AGGGAGCTGCATGCAAAAATATGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAAT------SizeHit CountTotal NormTotal
No Reads
droEug1
TC-----------------------CAGC-----GG---C----------------------AGAAAA---CGAACCATCT---------------GGACCGGCA---------------ATAAA-------------------------------------------------------------------------------TCAGGCCGGAATCTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTACTTGACCAA----------------------------------CTGCTACACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCAAGA-----------ATT----A-TTTTGTA----TGATT------GCGTT-ACCAAGAATCACAAATAGCGCGAAAATGTT---ACC---------------AGAAACGTGCAAAAATATGTACATTGAT-TGCATTC----------------------------------------------ATAAAAATAATCTAAACTAATTASizeHit CountTotal NormTotal
No Reads
dm3
GCTG------CTC------------CGGC-----GG---C----------------------AGGCAACGACGAACTATCC---------------GGACCGGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCTAC-------------------------------------------------------------TGG-GCCAACTGCTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTG---TTAAGCTTTTATTT-----------------------TCGAGAATCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAAATATCACAAGTGGCGCGATTGGTTC-G-GCC---------------ATCTGCATGCAAAGATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
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OSC		V145
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S1		V147
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTACAT-----TGCATTC----------------------------------------------ATAAT..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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..................................................................................................ACCGGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTA................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................................GCTGGAAACTAAGACTTCTA.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCTAATGGACCAA----------------------------------CTGCTAAACCTGGA.................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................CTAC-------------------------------------------------------------TGG-GCCAACTGCTAATGGACCA..................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAAGTGGCGCGATTGGT................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................AAATTG---TTAAGCTTTTATTT-----------------------TCGAG.............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GCGTT-AGCAAATATCACAAGTGG..........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GCTG------CTC------------CGGC-----GC---A----------------------AGGCAATGATGAATTAGCC---------------GGACCGGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCGAGAATCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAGATATCACAAGTGGCGCAATTCGGTT-G-GCC---------------AGCTGCATGCAAAGATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................21123.0023163000012001000000
............................................................................................................................................................................................................................................................................................................................................................................................TTATTT-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2618.00861010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGAATCA---TCTGATT----G-TTT.....................................................................................................................................................................................2117.00741200000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------TCGAGAATCA---TCTGATT----G-T.......................................................................................................................................................................................2116.00660000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CA---TCTGATT----G-TTTTGTA----TGAT.........................................................................................................................................................................2115.00531000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTA----TGATT------GCGTT-AGCAGAT.....................................................................................................................................................2114.00400000000004000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGTGGCGCAATTCGGTT-G-...........................................................................................................................2114.00440000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA----TGATT------GCGTT-AGCAGA......................................................................................................................................................2113.00300000021000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA----TGATT------GCGTT-AGCAGATA....................................................................................................................................................2113.00300000000003000000
................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------TCGAGAATCA---TCTGATT----G-C.......................................................................................................................................................................................2113.00321000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TCGAGAATCA---TCTGATT----G-TTT.....................................................................................................................................................................................2213.00330000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCTGATT----G-TTTTGTA----TGAT.........................................................................................................................................................................2013.00320100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTT-G-GCC---------------AGCTGCATGC...............................................................................................2112.00210000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAATCA---TCTGATT----G-TTTT....................................................................................................................................................................................2112.00220000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCGGTT-G-GCC---------------AGCTGCA..................................................................................................2112.00200100000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-AGCAGATATCACAAGTGG..........................................................................................................................................2112.00200000000110000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA----TGATT------GCGTT-AGCA........................................................................................................................................................1912.00200000000020000000
.................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TCGAGAATCA---TCTGATT----G-TTTTGG..................................................................................................................................................................................2512.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAATCA---TCTGATT----G-TTT.....................................................................................................................................................................................2012.00211000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AATCA---TCTGATT----G-TTTTGTA----TGATT------GC................................................................................................................................................................2712.00200020000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TCGAGAATCA---TCTGATT----G-TTTTGTA----.............................................................................................................................................................................2612.00200000020000000000
...................................................................ATGATGAATTAGCC---------------GGACCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GATT----G-TTTTGTA----TGATT------GCGT..............................................................................................................................................................2111.00100000010000000000
................................................................................................................................................................................................................................................................................................................AATGGACCAA----------------------------------CTGCTAAACCT....................................................................................................................................................................................................................................................................2111.00100100000000000000
........................................................................................................................GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTT..........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGCGCAATTCGGTT-G-G..........................................................................................................................2011.00100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCACAAGTGGCGCAATTCGGTT-.............................................................................................................................2511.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AATCA---TCTGATT----G-TTT.....................................................................................................................................................................................1611.00100000000001000000
.................................................................CAATGATGAATTAGCC---------------GGACCGGCA---------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GATT----G-TTTTGTA----TGATT------..................................................................................................................................................................1711.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTA----TGATT------GCGTT-AGCAGATA....................................................................................................................................................2511.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTTATTT-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2711.00110000000000000000
.................................................................................................................................................................................................................................CAAC-------------------------------------------------------------TGG-G-------CTAATGGACCAA----------------------------------CTGCT..........................................................................................................................................................................................................................................................................2511.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAGCTTTTATTT-----------------------TCGA..............................................................................................................................................................................................................1611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-G-GCC---------------AGCTGCATGCAAAGA..........................................................................................2111.00100000001000000000
................................................................................................................................................................................................................................TCAAC-------------------------------------------------------------TGG-G-------CTAATGGAC....................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................................................................................................A---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACT.................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................AA----------------------------------CTGCTAAACCTGGACAA..............................................................................................................................................................................................................................................................1911.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2211.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATTT-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2511.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................T----G-TTTTGTA----TGATT------GCGTT-AGCAGA......................................................................................................................................................2511.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATATCACAAGTGGCG........................................................................................................................................1911.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCGTTAAGCTTTTATTT-----------------------TCGAGA............................................................................................................................................................................................................2311.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AGCTGCATGCAAAGATGTGT.....................................................................................2111.00100000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---TCTGATT----G-TTTTGTA----TGA..........................................................................................................................................................................2111.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTTTGTA----TGATT------GCGT..............................................................................................................................................................1711.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAAGTGGCGCAATTCGGTT-.............................................................................................................................2211.00100000000000001000
......................................................................................................................................................................................................................AACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------C............................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATGCAAAGATGTGTACAT-----TGCA........................................................................2511.00100001000000000000
........................................................................................................................................................................................................................................................................................................................AA----------------------------------CTGCTAAACCTGGA.................................................................................................................................................................................................................................................................1611.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTT-----------------------TCGAGAATCA---TCTGATT----..........................................................................................................................................................................................2111.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CA---TCTGATT----G-TTTTGTA----TGATT------..................................................................................................................................................................2211.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTACAT-----TGCATTC----------------------------------------------ATAA...................2111.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................AAATTGTCGTTAAGCTTTTATTT-----------------------TCGAG.............................................................................................................................................................................................................2811.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2011.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TCGAGAATCA---TCTGATT----G-T.......................................................................................................................................................................................2011.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------TCGAGAATCA---TCTGATT----G-TTTTGT..................................................................................................................................................................................2611.00100100000000000000
..................................................................AATGATGAATTAGCC---------------GGACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAATTCGGTT-G-GCC---------------AGC......................................................................................................1911.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TT----G-TTTTGTA----TGATT------GCGTT-A...........................................................................................................................................................2111.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTCGGTT-G-GCC---------------AGCTG....................................................................................................2011.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTTTATTT-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................CCAA----------------------------------CTGCTAAACCTGGA.................................................................................................................................................................................................................................................................1811.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTTTATTT-----------------------TCGAGAATCA---TCTGATT----G-........................................................................................................................................................................................2611.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTTATTT-----------------------TCGAGAATCA---TCTGATT----G-G.......................................................................................................................................................................................2611.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TT----G-TTTTGTA----TGATT------GCGTT-AGCAGA......................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................................................................................................ACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATGGAC....................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AGCAGATATCACAAGTGGCG........................................................................................................................................2111.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTT-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2311.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTAAGCTTTTATTT-----------------------TCGAGAA...........................................................................................................................................................................................................2111.00100000000100000000
........................................................................................................A---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----G-TTTTGTA----TGATT------GCGTT-............................................................................................................................................................2111.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATT----G-TTTTGTA----TGAT.........................................................................................................................................................................1811.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---TCTGATT----G-TTTTGTA----TGATA------..................................................................................................................................................................2311.00100000001000000000
..............................................................................................................................................................................................................................................................................................................CTAATGGACCAA----------------------------------CTGCTAAACCT....................................................................................................................................................................................................................................................................2311.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGAATCA---TCTGATT----G-TTTTG...................................................................................................................................................................................2311.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTATTT-----------------------TCGAGAATCA---TCTGATT----G-........................................................................................................................................................................................2411.00110000000000000000
.....................................................................................................GGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACT.................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...............................................................................................................................................................................................................................TTCAAC-------------------------------------------------------------TGG-G-------CTAATGGACC...................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGATT----G-TTTTGTA----TGATT------G.................................................................................................................................................................2111.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CA---TCTGATT----G-TTTTGTA----TGA..........................................................................................................................................................................2011.00110000000000000000
..................................................................................................................................................................................................................TGGAAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------C............................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCTGATT----G-TTTTGTA----TGATT------GCGTT-............................................................................................................................................................2611.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-G-GCC---------------AGCTGCATGCAAAGATGTGTA....................................................................................2711.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATCA---TCTGATT----G-TTTTGT..................................................................................................................................................................................2211.00101000000000000000
droSec2
GCTG------CTC------------CGGC-----GC---A----------------------AGGCAATGATGAATTAGCC---------------GGACCGGCA---------------GTGAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCAAC-------------------------------------------------------------TGG-G-------CTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTA-----------------------TCGAGAATCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAGATATCACAAGCGGCGCAATTCGGTT-G-GCC---------------AGCTGCATGCAAAGATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATT----G-TTTTGTA----TGATT------GC................................................................................................................................................................2113.0030021
.................................................................................................................................................................................................................................................................................................................................................................................................................................CA---TCTGATT----G-TTTTGTA----TGATT------GC................................................................................................................................................................2412.0020011
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-AGCAGATATCACAAGC............................................................................................................................................1912.0020020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGATATCACAAGCGGCGC.......................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCGGTT-G-GCC---------------AGCTGC...................................................................................................2011.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTCGGTT-G-GCC---------------AGCTG....................................................................................................2011.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-AGCAGATATCACAAGCGGC.........................................................................................................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGGTT-G-GCC---------------AGCTGCA..................................................................................................2011.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------TCGAGAATCA---TCTGATT----G-TT......................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT------GCGTT-AGCAGATATCACA...............................................................................................................................................2111.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGATGTGTACAT-----TGCA........................................................................2111.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCACAAGCGGCGCAATTCG.................................................................................................................................2111.0010001
.................................................................CAATGATGAATTAGCC---------------GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAAGCGGCGCAATTCGGTT-G-GCC---------------AG.......................................................................................................2811.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCGGCGCAATTCGGTT-G-GCC---------------AG.......................................................................................................2611.0010010
...................................................................ATGATGAATTAGCC---------------GGACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.............................................................................................................................................................................................................................................................................................................................................................TGCTAAACCTGGACAAATTGTCGTT.....................................................................................................................................................................................................................................................2511.0010010
........................................................................................................................................................................................................................................................................................................................AA----------------------------------CTGCTAAACCTGGACAAATTGTC........................................................................................................................................................................................................................................................2511.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTTTGTA----TGATT------GCGTT-AGCAGAT.....................................................................................................................................................2511.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA----TGATT------GCGTT-AGCAGATA....................................................................................................................................................2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTA----TGATT------GCGTT-AGCAGAT.....................................................................................................................................................2111.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTCGGTT-G-GCC---------------AGCTGC...................................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................CTGCTAAACCTGGACAAATTGTCGTT.....................................................................................................................................................................................................................................................2611.0010010
..................................................................AATGATGAATTAGCC---------------GGACCGGCA---------------GTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
droYak3
C----------TC------------CAGC-----GG---G----------------------AGGCAACGACGAATCATCG---------------GGACCGGCA---------------GTAAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCTAC-------------------------------------------------------------TGG-G-------CTAATAGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCGAGAGTCA---TCTGATT----G-TTTTGTA----TGATT------GCGTT-AGCAAGTATCACAAGTGGCGCGATTGGGTT-G-GCC---------------AGCTGCATGCAA-GATGTTTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................AACTAAGACTTCTAC-------------------------------------------------------------TGG-G-------CT...........................................................................................................................................................................................................................................................................................................................2121.50320000010000
........................................................................................................................GTAAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2721.50300000000003
..................................................................AACGACGAATCATCG---------------GGACCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.00200000110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCA---TCTGATT----G-TTTTGTA----TGATT------GC................................................................................................................................................................2820.50101000000000
........................................................................GAATCATCG---------------GGACCGGCA---------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000000000
...........................................................................................................................AA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTT..........................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000010000
..................................................................................................................................................................................................................................................................................................................................................................................CGTTAAGCTTTTATTT-----------------------TCGAGAGTC.........................................................................................................................................................................................................2520.50100010000000
...................................................................................................................................................................................................................................................................................................................................................................................GTTAAGCTTTTATTT-----------------------TCGAGA............................................................................................................................................................................................................2120.50100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGCGCGATTGGGTT-G-G..........................................................................................................................2120.50101000000000
..........................................................................................................................................................................................................................AAGACTTCTAC-------------------------------------------------------------TGG-G-------CTAATA.......................................................................................................................................................................................................................................................................................................................2120.50100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTTTGTA----TGATT------GCGTT-AGCAAGT.....................................................................................................................................................2520.50100000010000
.......................................................................................................................................................................................................................................................................................................................................................................GGACAAATTGTCGTTAAGCTTTT.............................................................................................................................................................................................................................................2320.50100100000000
.........................................................................................................................................................................................................................TAAGACTTCTAC-------------------------------------------------------------TGG-G-------CTAAT........................................................................................................................................................................................................................................................................................................................2120.50101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA-GATGTTTACAT-----TGC.........................................................................1820.50100100000000
........................................................................................................................................................................................................................................................................................................................................................................GACAAATTGTCGTTAAGCTT...............................................................................................................................................................................................................................................2020.50101000000000
...................................................................................................................................................................................................................................................................................................................................................................................GTTAAGCTTTTATTT-----------------------TCGAGAGT..........................................................................................................................................................................................................2320.50100000010000
..................................................................................................................................................................................................................................................................................................................................................................................CGTTAAGCTTTTATTT-----------------------TCGAGAGT..........................................................................................................................................................................................................2420.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATGCAA-GATGTTTACAT-----T...........................................................................2220.50100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAAGTGGCGCGATTGGGTT-G-GC.........................................................................................................................2620.50100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCGATTGGGTT-G-GC.........................................................................................................................1920.50100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCGATTGGGTT-G-GCC---------------A........................................................................................................2120.50101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCGATTGGGTT-G-GCC---------------AGCTG....................................................................................................2320.50100001000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCGTTAAGCTTTTATTT-----------------------TCGA..............................................................................................................................................................................................................2320.50100000010000
.....................................................................................................................................................................................................................................................................................................................ACCAA----------------------------------CTGCTAAACCTGGACAAATTGT.........................................................................................................................................................................................................................................................2720.50101000000000
................................................................................................................................................................................................................................................................................................................................................................................GTCGTTAAGCTTTTATTT-----------------------TCGA..............................................................................................................................................................................................................2220.50101000000000
........................................................................................................A---------------GTAAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................2620.50101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTCA---TCTGATT----G-TTTTGTA----T............................................................................................................................................................................2020.50100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------TCGAGAGTCA---TCTGATT----G-TTTTGT..................................................................................................................................................................................2520.50100000010000
........................................................................................................................................................................................................................................................................................................................AA----------------------------------CTGCTAAACCTGGACAAATTGTCG.......................................................................................................................................................................................................................................................2620.50100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCTGATT----G-TTTTGTA----TGATT------G.................................................................................................................................................................2220.50110000000000
..................................................................................................................................................................................................................TGGAAACTAAGACTTCTAC-------------------------------------------------------------TGG-G-------C............................................................................................................................................................................................................................................................................................................................2420.50100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAAGTGGCGCGATTGGGTT-.............................................................................................................................2320.50100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGCGCGATTGGGTT-G-GC.........................................................................................................................2120.50101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTT-AGCAAGTATCACAAGTGGC.........................................................................................................................................2320.50100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-AGCAAGTATCACAAGTGGCGC.......................................................................................................................................2420.50100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-AGCAAGTATCACAAGTGGC.........................................................................................................................................2120.50101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCACAAGTGGCGCGATTGGGTT-G-G..........................................................................................................................2620.50100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATT------GCGTT-AGCAAGTATCA.................................................................................................................................................2020.50101000000000
.................................................................................................................................................................................................................................CTAC-------------------------------------------------------------TGG-G-------CTAATAGACCAA----------------------------------CTGC...........................................................................................................................................................................................................................................................................2420.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTAAGCTTTTATTT-----------------------TCGA..............................................................................................................................................................................................................1820.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGGTT-G-GCC---------------AGCTGCATG................................................................................................2220.50101000000000
.....................................................................GACGAATCATCG---------------GGACCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAAGTGGCGCGATTGGGTT-G-GCC---------------AGC......................................................................................................3020.50100000010000
....................................................................CGACGAATCATCG---------------GGACCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
....................................................................................................................................................................................................................................................................................................................................................................CCTGGACAAATTGTCGTTAAGCC................................................................................................................................................................................................................................................2320.50100100000000
droEre2
GCTG------TTC------------CAGC-----GG---C----------------------AGGCAACGATGAATCATCG---------------GGACCGGCA---------------GTAAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTTCTAC-------------------------------------------------------------TGA-G-------CTAATGGACCAA----------------------------------CTGCTAAACCTGGACAAATTGTCGTTAAGCTTTTATTT-----------------------TCGAGAATCA---TCTCATT----G-TTTTGTA----TGATC------GCGAT-AGCAAATATCACAAGTGGCGCGATTGGGTT-G-GCC---------------AGCTGCACGCAA-GATGTGTACAT-----TGCATTC----------------------------------------------ATAATAATAATCTAAATTAA---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...G------TTC------------CAGC-----GG---C----------------------AGGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000110
..................................................................AACGATGAATCATCG---------------GGACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGCGCGATTGGGTT-G-GCC---------------A........................................................................................................2311.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAAGTGGCGCGATTGGGTT-G-GCC---------------.........................................................................................................2611.0010100000
..............................................................................................................................................................................................................................CTTCTAC-------------------------------------------------------------TGA-G-------CTAATGGAC....................................................................................................................................................................................................................................................................................................................2011.0010001000
.....................................................................GATGAATCATCG---------------GGACCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATATCACAAGTGGCGCG......................................................................................................................................1911.0010000100
................................................................................................................................................................................................................................TCTAC-------------------------------------------------------------TGA-G-------CTAATGGACCAA----------------------------------CTGCTA.........................................................................................................................................................................................................................................................................2711.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAAGTGGCGCGATTGGGTT-G-GCC---------------.........................................................................................................2711.0010001000
.................................................................................................................................................................................................................................................................................................................ATGGACCAA----------------------------------CTGCTAAACCTGGACA...............................................................................................................................................................................................................................................................2511.0010100000
.........................................................................................................................................................................................................................................................................................................................A----------------------------------CTGCTAAACCTGGACAAATTGTCGT......................................................................................................................................................................................................................................................2611.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................ATTGTCGTTAAGCTTTTATC..........................................................................................................................................................................................................................................2011.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-AGCAAATATCACAAGTGGCGC.......................................................................................................................................2311.0010000100
..TG------TTC------------CAGC-----GG---C----------------------AGGCAACGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA-GATGTGTACAT-----TGC.........................................................................1811.0010000010
..................................................................AACGATGAATCATCG---------------GGACCGGCA---------------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..........................................................................................................................AAA-------------------------------------------------------------------------------TCAGGCTGGAAACTAAGACTT..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TT----G-TTTTGTA----TGATC------GCGAT-A...........................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGGTT-G-GCC---------------AGCTGCAC.................................................................................................2111.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATTGGGTT-G-GCC---------------AGCT.....................................................................................................1911.0010000010
.......................................................................................................................................................................................................................ACTAAGACTTCTAC-------------------------------------------------------------TGA-G-------C............................................................................................................................................................................................................................................................................................................................1911.0011000000
.............................................................................................................................................................................................................CAGGCTGGAAACTAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGCGCGATTGGGT...............................................................................................................................1811.0010000010
........................................................................................................................................................................................................................CTAAGACTTCTAC-------------------------------------------------------------TGA-G-------CTA..........................................................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 05/21/2015 at 04:17 PM