ID:

dvi_20970

 Coordinate:

scaffold_13049:22491264-22491414 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.0 -14.7 -14.7

Flybase annnotation

CDS [Dvir\GJ13971-cds]; exon [dvir_GLEANR_13819:2]; intron [Dvir\GJ13971-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACTGATTAGAATTTGAGGCGGCACTCGTTGATGTTGGATTGCGGTTTCAATTGCTAATTAGGCGGCAAGCCCTCGACTGGAAAGCATGTGCGACACTAAGAGCAACTCAAGCAACGTGAGGTTGCGTATCGCTTAGGCGCTTAAGGGAACTTCTCCATTAATTTGAGGCTAATCGCTTGTCGCTTCTCTTTTCATTTGCAGAGAAGGCATCCTAGTCGGATGCGGTAATCCGTTGCTGGATATATCGGCGA
**************************************************************************..((.....((....((((.((.....((((((((.......))).))))))).))))....)).....)).........************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 M047
female body
 SRR060679
140x9_testes_total
 V116
male body		 SRR060665
9_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 V053
head
 SRR060660
Argentina_ovaries_total
 SRR060672
9x160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060685
9xArg_0-2h_embryos_total
...............................................................................................................................................................................................................CATCCTAGTCGGATGCGGTAATCCGTT................. 27 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GCGGTAATCCGTTGCTGGA........... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................GACTGGAAAGCATGTGCGAC............................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CTCGACTGGAAAGCATGTGC................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GAAACCATGTGGGACACCAAGA...................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................GACACTAAGAGCAACTCGAG............................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................GCATGTGCGACACTAAGAGCAACT................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AATTAGGCGGCAAGCCCTCGACTG............................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................ATGTGCGACACTAAGAGCAAC................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................GACACTAAGAGCAACTCAA............................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................AGCCCTCGACTGGAAAGCATGTGCGACA............................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ACACTAAGAGCAACTCAAG............................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTCGTTGATGTTGGATTGC................................................................................................................................................................................................................. 19 0 2 1.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................CGTTGCTGGATATATCGGC.. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTAGGCGCTTAAGGGAACTTCT................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GGAATCCATGTGGGACACTAAG....................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AACCATGTGGGACACCAAGA...................................................................................................................................................... 20 3 5 0.60 3 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................ATTCAAGCAAGGTGAGGTT................................................................................................................................ 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GGGGCACTCGTTGATGTTTC...................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................ACTAGATGACGTTGGATTGC................................................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGCGGTAATACGTAGCTGG............ 19 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GGGGCAATCGTTGATGTTGGC..................................................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................ATCCGATGCTTGATCTATCG.... 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GAAACCATGTGGGACACCAA........................................................................................................................................................ 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................GGGGACTCGTTGATGTTG....................................................................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................TAGGCGCTTGAGAGAAC..................................................................................................... 17 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................CGCGGTAATACGTTGGTG............. 18 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................CGGTAATCGTTGATGTTG....................................................................................................................................................................................................................... 18 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................CCGGTACTCGTTGATGTTT....................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TGACTAATCTTAAACTCCGCCGTGAGCAACTACAACCTAACGCCAAAGTTAACGATTAATCCGCCGTTCGGGAGCTGACCTTTCGTACACGCTGTGATTCTCGTTGAGTTCGTTGCACTCCAACGCATAGCGAATCCGCGAATTCCCTTGAAGAGGTAATTAAACTCCGATTAGCGAACAGCGAAGAGAAAAGTAAACGTCTCTTCCGTAGGATCAGCCTACGCCATTAGGCAACGACCTATATAGCCGCT
*************************************************************************************************..((.....((....((((.((.....((((((((.......))).))))))).))))....)).....)).........************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060655
9x160_testes_total
 V053
head
.............................................................GGCCGTTCGGGAGCTGACCT.......................................................................................................................................................................... 20 1 1 2.00 2 2 0
.............ACTGCGCCGTGACCACCTA........................................................................................................................................................................................................................... 19 3 15 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:22491214-22491464 + dvi_20970 ACTGATT----------------------------------AGAAT--TTGAGGCGGCACTC-GTTGATGTTGGATTGCGGTTTCAATT-------GCTAATTAGGC--------G----GCAAGCCCTCG------ACTG------------------GAAAGCATGTGCGACACTAAGAGCAACTCAAGCAACGTGAGGTTGCGTATC----------GCTTA-----------GG-----CGC--TTAAGGGAACTTCTC-------------CATTA--------------A------------TTT-GAGGC---TAATCGC---------TTGTCGCTT--CTCTTTTCATTTGCAGAGAAGGCATCCTAGTCGGATGCGGTAATCCGTTGCTGGATATATCGGCGA------------
droMoj3 scaffold_6680:17098825-17099048 + ACTGAATATT-------------------------------AA-CA--TTAAAGCGGCAGGC-GTTGATATTGGACT-CGGTTTCAATT-------G---------CTAGTTAACG----ACAAGCCCTCG------ACTA------------------GACAACATGAGCAAC---------AA---AAGCAACGCGAGGTTGCGTATC---------------------TATAGGGCGCAT---------------------------------CATCA---------------------------ACTGTAGCC---TAATTCT----------TTTGAATT--C-GATTTTATTTGCAGAGAAGGCATCCTGGTAGGATGTGGAAATCCCCTGCTGGACATTTCGGCAC------------
droGri2 scaffold_15121:202665-202897 + dgr_375 ACTGATT----------------------------------AG-CA--TTT----------C-GCTGATGCTCGAGG-CGCTT---ATG---GTTTGTTAAGTGGGC--------G----ACAGACCCTCG------AGCG------------------GAGAAGATGTGCGACAGCCAGAGCAAATCGAGCAACGCCAGTTTGTGTGTA---------------------------------------TAAGGGAATCTGTAGATTGC---CAGATTCTC-------------------------------GGCGC---TAATCGT----------TT-TGATT--CTCGCTTTGATTGCAGAGAGGGCATCCTGGTGGGTTGCGGCAATCCACTGCTGGATATATCGGCAC------------
droWil2 scf2_1100000004511:5275707-5275990 + AATTGTG-TGTGGCTGGCTGGGTCGTCGTTAG---------GT-AG--TTCTGAATGGTCATTGTTGATTTTGATGTGA-------ATC-------GCCAATTGAAAGCGTTAGTA-GAGACAAGCCCTTGTCATCGAGCGGAGGCAGCAAAATTGTAGCACAAAATGAGCAC------AAGCAG---CAACAATGTTAGGTTGTTTTTCCTGGTCCGGCGGATAAG--------------------------------------------------ATTT-------------------------AAAAT-GAAACTAAAATTGAC-------------CGCTT--C-TTTTTTATTTGCAGAGAAGGTATCCTAGTCGGTTGCGGCAATCCGTTGCTGGATATTTCAGCAA------------
dp5 XR_group6:4378211-4378463 - dps_3036 AGCGATTGTG----------------------GTGCTAAGC---AG--CGTCGT-------C-GTTGAAGTTGAATTGA-------ATTGCTAATTGCTAATTGGGCGCATTAGCG----ACAGGCCCTCA------AGCA------------------GGAAGCATGTGCGATCGG------AG---CAGTAACGATAGGTGGGCGGT-GTGGTGTGGCGGGGAGGGATGTGTCGAGCTGAT---------------------------------TCCGG---------------------------AGT-GAAAC---TAATCTT----------TT-TGATT--C---TATCCAATACAGAGAAGGCATCCTGGTTGGATGCGGCAATCCACTGCTGGACATTTCCGCCA------------
droPer2 scaffold_9:2667392-2667644 - dpe_2172 AGCGATTGTG----------------------GTGCTAAGC---AG--CGTCGT-------C-GTTGAAGTTGAATTGA-------ATTGCTAATTGCTAATTGGGCGCATTAGCG----ACAGGCCCTCA------AGTA------------------GGAAGCATGTGCGATCGG------AG---CAGTAACGATAGGTGGGCGGT-GTGGTGTGGCGGGGAGGGATGTGTCGAGCTGAT---------------------------------TCCGG---------------------------AGT-GAAAC---TAATCTT----------TT-TGATT--C---TATCCAATACAGAGAAGGCATCCTGGTTGGATGCGGCAATCCACTGCTGGACATTTCCGCCA------------
droAna3 scaffold_13337:4131167-4131404 + ACTCC-------------------------------------C-AG--CGCTGTCGGGTGGCT----CTGCTGAATGGA-------ATC-------GTTAATTGGGCACATTAGCTTCAGTCAGGCCCTCA------GGCG------------------AGCAACATGTGTGACCGCAACGGCAG---CAGCAACGTTAGGTTCTG-------------------------------------GACGAAGAATCGAAG---------------------------------TTCTCA----TTTCGATGGT-C-TTTTCATAATCCG----------TT-TGATT--C-TGTCTTCCCTGCAGAGAAGGTATCCTTGTGGGATGTGGCAATCCGCTGTTGGACATCTCCGCCA------------
droBip1 scf7180000395450:264774-265014 + TGCAGTC----------------------------------CC-AG--CGCTGTCGGTTGACT----CTGCTGAATGGA-------ATC-------GTTAATTGGGCATATTAGCTTTAGTCTGGCCCTCA------GCCG------------------AGCAACATGTGTGACCGCAACGGCAG---CAGCAACGTTAGGTTCTCTATC------------------------------------------------------------------CAACCACGATGATCGTTTTTA----TT--GATGAT-C-TCCTACTAATCCC---------TTT-TGATT-----TTG-TTTCTGCAGAGAAGGTATCCTTGTGGGATGTGGCAACCCGCTGCTGGACATCTCCGCCA------------
droKik1 scf7180000302272:668370-668601 - TGCGCTG----------------------------------AA-AGCGCGCTGGCTGTACTCG----ATGCTGAATGGA-------ATC-------GTTAATTGGGCGCATTAGCG----TCAGGCCCTCA------GAAG------------------AGAAACATGTGCGACCG---------------CAACGTTAGGTCTGG-------------------------------------GGC-----------------T---GG---AATCTACTC---------GTTCACT----TTTAGAGGAT-AATGCTAATAATGTT---------TTC-TGTGTTTC-CGTTTTCCCCACAGAGAAGGCATCCTGGTGGGCTGCGGCAATCCGCTGCTGGACATCTCAGCCA------------
droFic1 scf7180000454048:723001-723234 + TGCGCCG----------------------------------AA-AG--CTCTGACCGCACTCG----ATGTTGAATGGA-------ATC-------GTTAATTGGGCGCATTAGCA----TCGGGCCCTCA------GACG------------------AGAAACATGTGCGATCGTATC---AG---CAGCAACGTTAGGTTCGG-------------------------------------GGC-----------------CTCT------GTACACCC---------ATCTAAATTAAC---AGAGAT-AATGCTAGTAATTTA----------TA-TA-TA-----TTCTTCTCCTCAGAGAAGGAATCCTGGTCGGTTGCGGCAATCCGCTGCTGGACATCTCCGCCG------------
droEle1 scf7180000491255:1413329-1413567 - TGCTCTG----------------------------------AA-AG--CTCTTGCTGTTCTCA---AAAGATGAATGGA-------ATC-------GTCAATTGGGCGCATTAGCA----TCAGGCCCTCA------GGCG------------------AGCAACATGTGCGATCGTATC---AG---CAGCAACGTTAGGTTCGGCT-----------------------TTCCTAT------------------------------C---TACCTACCC---------ATTGAAA----TCGAGGAGAT-AATGCTTATAATTCG----------TA-TGATT-----TACTCTACCGCAGAGAAGGAATCCTGGTGGGATGCGGCAATCCGCTGCTGGACATCTCCGCCG------------
droRho1 scf7180000779739:1489-1549 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGAGTTCTAATGGGCTTTGGCAATCCCCTGCTGGACATCACCTGCACCGTCGAGGATA
droBia1 scf7180000302193:2255169-2255405 - TGCGCTG----------------------------------AA-AG--CTCTTGCTGTGCTCG----ATGTTGGACGGA-------ATC-------GTTAATTGGGCGCATTAGCA----TCAGGCCCTCA------GACG------------------AGCAACATGTGCGATCGTATC---AG---CAGCAACGTTAGGTTCGG-------------------------------------GGC-----------------TTCTACA--CATAAACCT---------ACTAAAA----TAGGGGAAAT-AACACTAATAGCTCC----------TA-CGATT-----TT-CCTTTCGCAGAGAAGGAATCCTGGTGGGCTGCGGCAACCCGCTGCTGGACATCTCCGCCG------------
droTak1 scf7180000415706:67648-67873 - TGCGCCG----------------------------------AA-AG--CTCTTGCTGTACTCG----ATGTTGAATGGA-------ATC-------CGCAATTGGGCGCATTAGCA----TCAGACCCTCA------GGCG------------------AGCAACATGTGCGATCGT---------------AACGTTAGGTTCGG-------------------------------------GCA-----------------CTCTACACCTATA--CT------AGCCATCGAAA----TAAGGGAGAT-AAGACTAATA------------------TAATT----TTTATTTCCCACAGAGAAGGAATCCTGGTGGGTTGCGGCAATCCGCTGCTGGACATCTCCGCCG------------
droEug1 scf7180000409711:6102501-6102728 - TGCGCTG----------------------------------AA-AG--CTCTTTACGTACTTG----GTGTTGAATGGA-------ACC-------GTTAATTGGGCGCATTAGCG----TCAGGCCCTCA------GGCG------------------AGTAACATGTGCGATCGTATC---AA---TAGCAACGTTAGGTGGGG-------------------------------------ATT-----------------TTCGACGTTTATATACCC-------------------------AAGAT-AAATATAAGAATTCC----------TC-TAATT-----TTGTTCACTGCAGAGAAGGAATCCTAGTGGGTTGTGGCAATCCACTTCTGGACATCTCCGCCG------------
dm3 chr3L:13014608-13014827 - TGCGCTTA---------------------------------AA-AG--CTCTGGTTGAACGCA----ATGTTGACTGGT-------ATC-------GTTAATTGGGCGCATTAGCT----AGAGGCCCTCA------GACG------------------AGCAACATGTGCGATCG------------------CGTCAGGTTTGG-------------------------------------GGC-----------------TACTGC---TATGTACTT---------AGCGAA-------------------ACTAATAATCCAAATAATATATTT-T--T-----TTTTTGTTCCACAGAGAAGGAATCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------
droSim2 3l:12705063-12705289 - dsi_7533 TGCGCTTA---------------------------------AA-AG--CTCTGGCTGAACGCG----ATGTTGAATGTT-------ATC-------GTTAATTGAGCGCATTAGCT----TGAGGCCCTCA------GACG------------------AGCAACATGTGCGACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---TATATACTT---------AGCGAAA----CAGTGAAGAT-AGCACTATTAATCCA----------AA-TATTT----TTTTTGTTCCACAGAGAAGGAATCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------
droSec2 scaffold_0:5186188-5186408 - dse_435 TGCGCTTA---------------------------------AA-AG--CTCTGGCTGAACGCG----ATGTTGAATGGT-------ATC-------GTTAATTGAGCGCATTAGCT----TGAGGCCCTCA------GACG------------------AGCAACATGTGCGACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---TATATACTT---------AGCGAAA----CAGTG--------CACTACTAATCCA----------AA-TATTT--T-TTTTTGTTCCACAGAGAAGGAATCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------
droYak3 3L:13093662-13093902 - TGCGCTG----------------------------------AA-AG--CTCTGACTGAACACCAGTATTGTTGAGTGGC-------ATT-------GTTAATTGATCGCATTAGCA----TCGGGCCCTCA------GACG------------------AGCAACATGTACGATCGTATC---AG---CAGTAACATTAGGTTTGG-------------------------------------GGC-----------------AACTGC---TATGTACTC---------ATCGAAA----CAGAGAAGAT-AGCATCAATAATCCA----------AA-TGATT-----TTCTGTTCCACAGAGAAGGAATTCTGGTCGGATGCGGCAACCCGCTGCTAGACATCTCCGCCG------------
droEre2 scaffold_4784:13022182-13022418 - TGCGCTG----------------------------------AA-AG--CTCTGGCTGAACACG----ATGTTTAGAGGC-------ATC-------GTTAATTGGGCGCATTAGCA----TCAGTCCCTCA------GACG------------------AGCAACATGTGCGATCCTATA---AG---CAGTAGCATTAGGTTTGG-------------------------------------GGC-----------------TATTAC---TATATACTC---------ATCGAAA----CAGAGAAGAT-AGCACTAATAATCCA----------AA-TGATT-----TTCTGTTTCACAGAGAAGGAACCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ACTGATT----------------------------------AGAAT--TTGAGGCGGCACTC-GTTGATGTTGGATTGCGGTTTCAATT-------GCTAATTAGGC--------G----GCAAGCCCTCG------ACTG------------------GAAAGCATGTGCGACACTAAGAGCAACTCAAGCAACGTGAGGTTGCGTATC----------GCTTA-----------GG-----CGC--TTAAGGGAACTTCTC-------------CATTA--------------A------------TTT-GAGGC---TAATCGC---------TTGTCGCTT--CTCTTTTCATTTGCAGAGAAGGCATCCTAGTCGGATGCGGTAATCCGTTGCTGGATATATCGGCGA------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................CATCCTAGTCGGATGCGGTAATCCGTT.............................2712.002000000000000000000100000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GCGGTAATCCGTTGCTGGA.......................1911.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................G------ACTG------------------GAAAGCATGTGCGAC...........................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................CTCG------ACTG------------------GAAAGCATGTGC..............................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GCATGTGCGACACTAAGAGCAACT..............................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................AATTAGGC--------G----GCAAGCCCTCG------ACTG------------------..........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................ATGTGCGACACTAAGAGCAAC...............................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................GACACTAAGAGCAACTCAA...........................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................AGCCCTCG------ACTG------------------GAAAGCATGTGCGACA..........................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................ACACTAAGAGCAACTCAAG..........................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
...........................................................CTC-GTTGATGTTGGATTGC..........................................................................................................................................................................................................................................................................................................................................................1921.002001000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CGTTGCTGGATATATCGGC..............1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTA-----------GG-----CGC--TTAAGGGAACTTCT...................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
ACTGAATATT-------------------------------AA-CA--TTAAAGCGGCAGGC-GTTGATATTGGACT-CGGTTTCAATT-------G---------CTAGTTAACG----ACAAGCCCTCG------ACTA------------------GACAACATGAGCAAC---------AA---AAGCAACGCGAGGTTGCGTATC---------------------TATAGGGCGCAT---------------------------------CATCA---------------------------ACTGTAGCC---TAATTCT----------TTTGAATT--C-GATTTTATTTGCAGAGAAGGCATCCTGGTAGGATGTGGAAATCCCCTGCTGGACATTTCGGCAC------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................CTCG------ACTA------------------GACAACATGAGC..............................................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTAGGATGTGGAAATCCCCTGCT..........................2811.001100000
droGri2
ACTGATT----------------------------------AG-CA--TTT----------C-GCTGATGCTCGAGG-CGCTT---ATG---GTTTGTTAAGTGGGC--------G----ACAGACCCTCG------AGCG------------------GAGAAGATGTGCGACAGCCAGAGCAAATCGAGCAACGCCAGTTTGTGTGTA---------------------------------------TAAGGGAATCTGTAGATTGC---CAGATTCTC-------------------------------GGCGC---TAATCGT----------TT-TGATT--CTCGCTTTGATTGCAGAGAGGGCATCCTGGTGGGTTGCGGCAATCCACTGCTGGATATATCGGCAC------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................GGC--------G----ACAGACCCTCG------AGCG------------------GAGAAGATG.................................................................................................................................................................................................................................................................2811.00101
............................................................................................................................ACCCTCG------AGCG------------------GAGAAGATGTGCG.............................................................................................................................................................................................................................................................2411.00110
............................................................................................................................................................................ACAGCCAGAGCAAATCGA...........................................................................................................................................................................................................................................1811.00110
.....................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGGTTGCGGCAAT..................................1811.00110
...............................................................................................................................CTCG------AGCG------------------GAGAAGATGTGCG.............................................................................................................................................................................................................................................................2111.00101
............................................................................................................................................................................ACAGCCAGAGCAAATCGAGCAACC.....................................................................................................................................................................................................................................2411.00101
............................................................................................................................................................................ACAGCCAGAGCAAATCGAGCA........................................................................................................................................................................................................................................2111.00101
...........................................................................................................................................................................................................................................................................................................................................................................AGAGGGCATCCTGGTGGGTTGCGGC.....................................2511.00101
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTGGGTTGCGGC.....................................1811.00101
............................................................................................................................................................................................................................................................................................................................................................................GAGGGCATCCTGGTGGGTT..........................................1911.00110
........................................................................................................GGC--------G----ACAGACCCTCG------AGCG------------------GAGAAG....................................................................................................................................................................................................................................................................2511.00101
......................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGTTGCGGCAATCC................................1911.00110
..................................................................................T---ATG---GTTTGTTAAGTGGGC--------G----ACAGA............................................................................................................................................................................................................................................................................................................2511.00110
.....................................................................................................................................................................ATGTGCGACAGCCAGAGCAAATCGA...........................................................................................................................................................................................................................................2511.00110
.......................................................................................................................................................................GTGCGACAGCCAGAGCAAATCG............................................................................................................................................................................................................................................2211.00101
...........................................................................................................................................................................................................................................................................................................................................................................AGAGGGCATCCTGGTGGGTTGCG.......................................2311.00101
..........................................................................................................................AGACCCTCG------AGCG------------------GAGAAGATGTGCG.............................................................................................................................................................................................................................................................2611.00101
droWil2
AATTGTG-TGTGGCTGGCTGGGTCGTCGTTAG---------GT-AG--TTCTGAATGGTCATTGTTGATTTTGATGTGA-------ATC-------GCCAATTGAAAGCGTTAGTA-GAGACAAGCCCTTGTCATCGAGCGGAGGCAGCAAAATTGTAGCACAAAATGAGCAC------AAGCAG---CAACAATGTTAGGTTGTTTTTCCTGGTCCGGCGGATAAG--------------------------------------------------ATTT-------------------------AAAAT-GAAACTAAAATTGAC-------------CGCTT--C-TTTTTTATTTGCAGAGAAGGTATCCTAGTCGGTTGCGGCAATCCGTTGCTGGATATTTCAGCAA------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................C------AAGCAG---CAACAATGTTAG.................................................................................................................................................................................................................................1911.00100001
...................................................................................................AATTGAAAGCGTTAGTA-GA..................................................................................................................................................................................................................................................................................................................1911.00100010
.......................CGTCGTTAG---------GT-AG--TTCTGAATG................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
......................................................................TTGATGTGA-------ATC-------GCCAATTGAAAGC............................................................................................................................................................................................................................................................................................................................2511.00100010
...........................................................................................................................................................GTAGCACAAAATGAGCAC------AAGCAG---C............................................................................................................................................................................................................................................2511.00110000
.......................................................................................................................GACAAGCCCTTGTCATCGAGCGGAGGC.......................................................................................................................................................................................................................................................................................2711.00100100
dp5
AGCGATTGTG----------------------GTGCTAAGC---AG--CGTCGT-------C-GTTGAAGTTGAATTGA-------ATTGCTAATTGCTAATTGGGCGCATTAGCG----ACAGGCCCTCA------AGCA------------------GGAAGCATGTGCGATCGG------AG---CAGTAACGATAGGTGGGCGGT-GTGGTGTGGCGGGGAGGGATGTGTCGAGCTGAT---------------------------------TCCGG---------------------------AGT-GAAAC---TAATCTT----------TT-TGATT--C---TATCCAATACAGAGAAGGCATCCTGGTTGGATGCGGCAATCCACTGCTGGACATTTCCGCCA------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................GTGGTGTGGCGGGGAGGG.....................................................................................................................................................................................................18114.00140900005000
............................................................................................................................................................................................................GCGGT-GTGGTGTGGCGGG..........................................................................................................................................................................................................1815.0050000023000
................................................................................................................................................................................................................T-GTGGTGTGGCGGGGAGGG.....................................................................................................................................................................................................1913.0030200001000
..................................................................................................................................................................................................................GTGGTGTGGCGGGGAGGGA....................................................................................................................................................................................................1912.0020100001000
...................................................................................................AATTGGGCGCATTAGCG----ACA..............................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................ATTAGCG----ACAGGCCCTCA------AGC.............................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTTGGATGCGGC.....................................1811.0010100000000
...........................................................................................................................................................................GATCGG------AG---CAGTAACGATAGA................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................GCA------------------GGAAGCATGTGCGATCGG------AG---.............................................................................................................................................................................................................................................2311.0010100000000
...................................................CGT-------C-GTTGAAGTTGAATTG...........................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................T-GTGGTGTGGCGGGGAGGGA....................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................GTGGGCGGT-GTGGTGTGGCGGGG.........................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................................................................GTGGGCGGT-GTGGTGTGGC.............................................................................................................................................................................................................1911.0010000010000
............................................................................................................................................................................................................GCGGT-GTGGTGTGGCGGGG.........................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................A------AGCA------------------GGAAGCATGTGCGATCGG------AG---C............................................................................................................................................................................................................................................2611.0010000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGGACATTTCCGCC.............1911.0010001000000
........................................................................................................................................................................................................GTGGGCGGT-GTGGTGTGGCG............................................................................................................................................................................................................2011.0010100000000
droPer2
AGCGATTGTG----------------------GTGCTAAGC---AG--CGTCGT-------C-GTTGAAGTTGAATTGA-------ATTGCTAATTGCTAATTGGGCGCATTAGCG----ACAGGCCCTCA------AGTA------------------GGAAGCATGTGCGATCGG------AG---CAGTAACGATAGGTGGGCGGT-GTGGTGTGGCGGGGAGGGATGTGTCGAGCTGAT---------------------------------TCCGG---------------------------AGT-GAAAC---TAATCTT----------TT-TGATT--C---TATCCAATACAGAGAAGGCATCCTGGTTGGATGCGGCAATCCACTGCTGGACATTTCCGCCA------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................GTGGTGTGGCGGGGAGGG.....................................................................................................................................................................................................1826.50130100111
..................................................................................................................................................................................................................GTGGTGTGGCGGGGAGGGA....................................................................................................................................................................................................1914.004000004
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTTGGATGCGGCAATC.................................2012.002200000
........................................................................................................................................................................................................GTGGGCGGT-GTGGTGTGGC.............................................................................................................................................................................................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................TGGTTGGATGCGGCAATCCACTGCTGG........................2711.001010000
........................................................................................................................................................................................................GTGGGCGGT-GTGGTGTGGCG............................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................GG------AG---CAGTAACGATAGGTGGGC...........................................................................................................................................................................................................................2211.001000001
..................................................................................................................................................................AGCATGTGCGATCGG------AG---CAGTAACG.....................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................TTGGATGCGGCAATCCACTGCTGGA.......................2511.001010000
............................................................................................................................................................................................................GCGGT-GTGGTGTGGCGGG..........................................................................................................................................................................................................1811.001000100
droAna3
ACTCC-------------------------------------C-AG--CGCTGTCGGGTGGCT----CTGCTGAATGGA-------ATC-------GTTAATTGGGCACATTAGCTTCAGTCAGGCCCTCA------GGCG------------------AGCAACATGTGTGACCGCAACGGCAG---CAGCAACGTTAGGTTCTG-------------------------------------GACGAAGAATCGAAG---------------------------------TTCTCA----TTTCGATGGT-C-TTTTCATAATCCG----------TT-TGATT--C-TGTCTTCCCTGCAGAGAAGGTATCCTTGTGGGATGTGGCAATCCGCTGTTGGACATCTCCGCCA------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................GGGATGTGGCAATCCGCTGTTGGAC......................2512.002020000
............................................................................................................................................................................................................................................................................................................................................................................................GATGTGGCAATCCGCTGT...........................1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................AGAGAAGGTATCCTTGTGGGA...........................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................AATCCG----------TT-TGATT--C-TGTCTTCCCTG.................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGTTGGACATCTCCGC..............2311.001010000
..................................................................................................................................................................AACATGTGTGACCGCAACGGC..................................................................................................................................................................................................................................................2111.001001000
...................................................................................................................................................................ACATGTGTGACCGCAACGGC..................................................................................................................................................................................................................................................2011.001001000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTTGTGGGATGTGGCAATCC................................2311.001010000
................................................................................................................................................................GCAACATGTGTGACCGCAACGGC..................................................................................................................................................................................................................................................2311.001100000
droBip1
TGCAGTC----------------------------------CC-AG--CGCTGTCGGTTGACT----CTGCTGAATGGA-------ATC-------GTTAATTGGGCATATTAGCTTTAGTCTGGCCCTCA------GCCG------------------AGCAACATGTGTGACCGCAACGGCAG---CAGCAACGTTAGGTTCTCTATC------------------------------------------------------------------CAACCACGATGATCGTTTTTA----TT--GATGAT-C-TCCTACTAATCCC---------TTT-TGATT-----TTG-TTTCTGCAGAGAAGGTATCCTTGTGGGATGTGGCAACCCGCTGCTGGACATCTCCGCCA------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGCGCTG----------------------------------AA-AGCGCGCTGGCTGTACTCG----ATGCTGAATGGA-------ATC-------GTTAATTGGGCGCATTAGCG----TCAGGCCCTCA------GAAG------------------AGAAACATGTGCGACCG---------------CAACGTTAGGTCTGG-------------------------------------GGC-----------------T---GG---AATCTACTC---------GTTCACT----TTTAGAGGAT-AATGCTAATAATGTT---------TTC-TGTGTTTC-CGTTTTCCCCACAGAGAAGGCATCCTGGTGGGCTGCGGCAATCCGCTGCTGGACATCTCAGCCA------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGCGCCG----------------------------------AA-AG--CTCTGACCGCACTCG----ATGTTGAATGGA-------ATC-------GTTAATTGGGCGCATTAGCA----TCGGGCCCTCA------GACG------------------AGAAACATGTGCGATCGTATC---AG---CAGCAACGTTAGGTTCGG-------------------------------------GGC-----------------CTCT------GTACACCC---------ATCTAAATTAAC---AGAGAT-AATGCTAGTAATTTA----------TA-TA-TA-----TTCTTCTCCTCAGAGAAGGAATCCTGGTCGGTTGCGGCAATCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGCTCTG----------------------------------AA-AG--CTCTTGCTGTTCTCA---AAAGATGAATGGA-------ATC-------GTCAATTGGGCGCATTAGCA----TCAGGCCCTCA------GGCG------------------AGCAACATGTGCGATCGTATC---AG---CAGCAACGTTAGGTTCGGCT-----------------------TTCCTAT------------------------------C---TACCTACCC---------ATTGAAA----TCGAGGAGAT-AATGCTTATAATTCG----------TA-TGATT-----TACTCTACCGCAGAGAAGGAATCCTGGTGGGATGCGGCAATCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGGAGTTCTAATGGGCTTTGGCAATCCCCTGCTGGACATCACCTGCACCGTCGAGGATASizeHit CountTotal NormTotal
No Reads
droBia1
TGCGCTG----------------------------------AA-AG--CTCTTGCTGTGCTCG----ATGTTGGACGGA-------ATC-------GTTAATTGGGCGCATTAGCA----TCAGGCCCTCA------GACG------------------AGCAACATGTGCGATCGTATC---AG---CAGCAACGTTAGGTTCGG-------------------------------------GGC-----------------TTCTACA--CATAAACCT---------ACTAAAA----TAGGGGAAAT-AACACTAATAGCTCC----------TA-CGATT-----TT-CCTTTCGCAGAGAAGGAATCCTGGTGGGCTGCGGCAACCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGCGCCG----------------------------------AA-AG--CTCTTGCTGTACTCG----ATGTTGAATGGA-------ATC-------CGCAATTGGGCGCATTAGCA----TCAGACCCTCA------GGCG------------------AGCAACATGTGCGATCGT---------------AACGTTAGGTTCGG-------------------------------------GCA-----------------CTCTACACCTATA--CT------AGCCATCGAAA----TAAGGGAGAT-AAGACTAATA------------------TAATT----TTTATTTCCCACAGAGAAGGAATCCTGGTGGGTTGCGGCAATCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGCGCTG----------------------------------AA-AG--CTCTTTACGTACTTG----GTGTTGAATGGA-------ACC-------GTTAATTGGGCGCATTAGCG----TCAGGCCCTCA------GGCG------------------AGTAACATGTGCGATCGTATC---AA---TAGCAACGTTAGGTGGGG-------------------------------------ATT-----------------TTCGACGTTTATATACCC-------------------------AAGAT-AAATATAAGAATTCC----------TC-TAATT-----TTGTTCACTGCAGAGAAGGAATCCTAGTGGGTTGTGGCAATCCACTTCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotal
No Reads
dm3
TGCGCTTA---------------------------------AA-AG--CTCTGGTTGAACGCA----ATGTTGACTGGT-------ATC-------GTTAATTGGGCGCATTAGCT----AGAGGCCCTCA------GACG------------------AGCAACATGTGCGATCG------------------CGTCAGGTTTGG-------------------------------------GGC-----------------TACTGC---TATGTACTT---------AGCGAA-------------------ACTAATAATCCAAATAATATATTT-T--T-----TTTTTGTTCCACAGAGAAGGAATCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCCTGGTCGGATGCGGCA....................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTCGGATGCGGCAACCCGCTGC...........................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGC.....................................1914.0040000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GAATCCTGGTCGGATGCGGCA....................................2114.0040000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTCGGATGCGGCAACCCGCT.............................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCCTGGTCGGATGCGGC.....................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GAATCCTGGTCGGATGCGGCAACCCGCT.............................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................G------------------AGCAACATGTGCGATCG------------------.......................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGGAATCCTGGTCGGATGCGGCAACC.................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCCGCTGCT..........................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTG...............................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGCAACCCGCTG............................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TCA------GACG------------------AGCAACATGTG...............................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGAAGGAATCCTGGTCGGATGC........................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GGTCGGATGCGGCAACCC................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ACG------------------AGCAACATGTGCGAT...........................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GCGCATTAGCT----AGAGGCCCTCA------GA..............................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TCA------GACG------------------AGCAACATGTGCGATCG------------------.......................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGGAATCCTGGTCGGATGCGGCA....................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CG------------------CGTCAGGTTTGG-------------------------------------GGC-----------------TAC...............................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GGAATCCTGGTCGGATGCGG......................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGAGAAGGAATCCTGGTC..............................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGATCG------------------C......................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................................................................................................................AGGCCCTCA------GACG------------------AGCAAC....................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGAGAAGGAATCCTGGTCGGATGC........................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTCGGATGCGGCA....................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCCTGGTCGGATGC........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GAATCCTGGTCGGATGCGGC.....................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGC..............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTCGGATGCGGCAACCCGCT.............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTCGGATGCGGCAACCCGCTG............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGCG.............................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGGAATCCTGGTCGGATG.........................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCCGCTGCTGG........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTCGGATGCGGCAACC.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAAC..................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGGTCGGATGCGGCAACCCGCT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GAGAAGGAATCCTGGTCGGATGCGGC.....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGCGA............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGGTCGGATGCGGCAACCCGCTGCTG.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................A------GACG------------------AGCAACATGTGCGATCG------------------.......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................CCCTCA------GACG------------------AGCAACATGTGCGAT...........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGCGATCG------------------CGTCAGGTTTGG-------------------------------------G.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AACATGTGCGATCG------------------CGTCAGAG...............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AACCCGCTGCTGGACATCTCCGCCG------------2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGAAGGAATCCTGGTCGGA...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GAATCCTGGTCGGATGCGGCAACCCGC..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................ATTGGGCGCATTAGCT----AGAGGT...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGAAGGAATCCTGGTCGG............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTGG-------------------------------------GGC-----------------TACTGC---TATGTACT.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGATC..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................GACG------------------AGCAACATGTGCGAT...........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGGTCGGATGCGGCAACCCGCTGC...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GGAATCCTGGTCGGATGCGGCAACCCGCT.............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TGTGCGATCG------------------CGTCAGGTT..............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCCGCTGC...........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................G--CTCTGGTTGAACGCA----ATGTTGACT.............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................CT----AGAGGCCCTCA------GACG------------------AGCAAC....................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................................................................GAATCCTGGTCGGATGCGGCAACCCG...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGA............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGCAA...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGGAATCCTGGTCGGATGCGGCAACC.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TCA------GACG------------------AGCAACATGTGCGA............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGGTCGGATGCGGCAACCCGC..............................2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGAAGGAATCCTGGTCGGAT..........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCC................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTCGGATGCGGCAACCCGC..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................GCCCTCA------GACG------------------AGCAACATG.................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................CG------------------AGCAACATGTGCGATCG------------------CG.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGATCG------------------.......................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................T-------ATC-------GTTAATTGGGCGCATTAGC......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GACG------------------AGCAACATGTGCGA............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GTCGGATGCGGCAACCCGCTGCTG.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGCAACC.................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GAGAAGGAATCCTGGTCGG............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTCGGATGCGGCAAC..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGCA....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCCTGGTCGGA...........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGATCG------------------CGT....................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................................................................................................................CG------------------CGTCAGGTTTGG-------------------------------------GGC-----------------TACTGC---.........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGCAACATGTGCGATCG------------------C......................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCCTGGTCGGATGCGG......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCCGCT.............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCG.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AACCCGCTGCTGGACATCTCCGC..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCGATCG------------------CGTCAGGTTTGG-------------------------------------GGC-----------------..................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTGGTCGGATGCGGCAACCCGCTG............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................CG------------------CGTCAGGTTTGG-------------------------------------GGC-----------------TACTG.............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGCAC...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGGAATCCTGGTCGGATGCGG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GGAATCCTGGTCGGATGCGGCA....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TGG-------------------------------------GGC-----------------TACTGC---TATGTACT.................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TGTGCGATCG------------------CGTCAGGTTTGG-------------------------------------GGC-----------------..................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................GACG------------------AGCAACATGTGCGATCG------------------C......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGCAACCCGCT.............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGCGATCG------------------.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGGAATCCTGGTCGGATGCG.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGGAATCCTGGTCGGATGCGGCAAA..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................A------GACG------------------AGCAACATGTGATC............................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGCGCTTA---------------------------------AA-AG--CTCTGGCTGAACGCG----ATGTTGAATGTT-------ATC-------GTTAATTGAGCGCATTAGCT----TGAGGCCCTCA------GACG------------------AGCAACATGTGCGACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---TATATACTT---------AGCGAAA----CAGTGAAGAT-AGCACTATTAATCCA----------AA-TATTT----TTTTTGTTCCACAGAGAAGGAATCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................ACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------..................................................................................................................................................................1915.00550000000000000000
............................................................................................................................................G------------------AGCAACATGTGCGACCG------------------.......................................................................................................................................................................................................................................1814.00422000000000000000
................................................................................................................................TCA------GACG------------------AGCAACATGTGCGACCG------------------.......................................................................................................................................................................................................................................2413.00312000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGGTCGGATGCGGCAACCCGCTGC...........................2413.00300000011010000000
..........................................................................................................................................................................................................................................................................................................................................................................GAGAAGGAATCCTGGTCGGATGC........................................2312.00200000000000200000
........................................................................................................................................................................TGCGACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------T.................................................................................................................................................................2412.00202000000000000000
......................................................................................................................................................................................................AGGTTTGG-------------------------------------GAC-----------------TACTGC---T........................................................................................................................................................1812.00220000000000000000
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGCGAC...........................................................................................................................................................................................................................................................2411.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCTGGACATCTCCG...............1811.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGCT....................................2011.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGAAGGAATCCTGGTCGGAT..........................................2011.00100100000000000000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGAC...........................................................................................................................................................................................................................................................2311.00110000000000000000
..............................................................................................................................CCTCA------GACG------------------AGCAACATG.................................................................................................................................................................................................................................................................1811.00100000100000000000
................................................................................................................................................................GCAACATGTGCGACCG------------------CG.....................................................................................................................................................................................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGGTCGGATGCGGCAACCCGCTGCT..........................2511.00100000010000000000
.....................................................................................................................................................................................................CAGGTTTGG-------------------------------------GAC-----------------TACTGC---T........................................................................................................................................................1911.00100100000000000000
.........................................................................................................................................GACG------------------AGCAACATGTGCGACCG------------------.......................................................................................................................................................................................................................................2111.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCCGCT.............................2411.00100010000000000000
...............................................................................................................................................................................G------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TAC...............................................................................................................................................................1911.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCC................................2111.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGGTCGGATGCGGCAACCCGCTG............................2311.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTCGGATGCGGC.....................................1811.00100100000000000000
..............................................................................................................................................................................CG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------T.................................................................................................................................................................1811.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGAAGGAATCCTGGTCGGATGCGGCAAC..................................2811.00101000000000000000
..........................................................................................................................................................................CGACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---T........................................................................................................................................................2811.00110000000000000000
...................................................................................................................................................................ACATGTGCGACCG------------------CGTCAG.................................................................................................................................................................................................................................1911.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTCGGATGCGGCAACC.................................2211.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGACATCTCCGCC.............1811.00100010000000000000
............................................................................................................................................................................ACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---.........................................................................................................................................................2511.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATCCTGGTCGGATGCGGC.....................................1911.00100100000000000000
droSec2
TGCGCTTA---------------------------------AA-AG--CTCTGGCTGAACGCG----ATGTTGAATGGT-------ATC-------GTTAATTGAGCGCATTAGCT----TGAGGCCCTCA------GACG------------------AGCAACATGTGCGACCG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---TATATACTT---------AGCGAAA----CAGTG--------CACTACTAATCCA----------AA-TATTT--T-TTTTTGTTCCACAGAGAAGGAATCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................G------------------AGCAACATGTGCGACCG------------------CG.....................................................................................................................................................................................................................................2014.0040103
............................................................................................................................................G------------------AGCAACATGTGCGACCG------------------.......................................................................................................................................................................................................................................1813.0032001
...............................................................................................................................................................AGCAACATGTGCGACCG------------------CG.....................................................................................................................................................................................................................................1912.0020011
..............................................................................................................................................................................CG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTG.............................................................................................................................................................2212.0022000
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGCG.............................................................................................................................................................................................................................................................2212.0020101
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGACCG------------------.......................................................................................................................................................................................................................................2512.0020002
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGCGACCG------------------.......................................................................................................................................................................................................................................2612.0021001
............................................................................GGT-------ATC-------GTTAATTGAGCG.............................................................................................................................................................................................................................................................................................................................1811.0011000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGTCGGATGCGGC.....................................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................TGTTCCACAGAGAAGGAATCCTGGT...............................................2511.0011000
...............................................................................................................................CTCA------GACG------------------AGCAACATGTGCGAC...........................................................................................................................................................................................................................................................2311.0010001
....................................................................................................................................................................................................................................................................................................................................................................................CCTGGTCGGATGCGGCAACCCGC..............................2311.0010010
..............................................................................................................................CCTCA------GACG------------------AGCAACATG.................................................................................................................................................................................................................................................................1811.0010010
...................................................................................................................................................................................................................................................................................ATACTT---------AGCGAAA----CAGTG--------CA.............................................................................................................2011.0011000
.................................................................................................................................CA------GACG------------------AGCAACATGTGCGACCG------------------C......................................................................................................................................................................................................................................2411.0010010
................................................................................................................................................................GCAACATGTGCGACCG------------------CGTCAGGTTTG............................................................................................................................................................................................................................2711.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................GCAACCCGCTGCTGGACATCTC.................2211.0010010
................................................................................................................................................................................................................................................................................................................................................................................GAATCCTGGTCGGATGCGG......................................1911.0010010
............................................................................................................................................G------------------AGCAACATGTGCGACCG------------------CGTCAGAGA..............................................................................................................................................................................................................................2711.0010010
..................................................................................................................................A------GACG------------------AGCAACATGTGCGAC...........................................................................................................................................................................................................................................................2011.0010001
...................................................................................................................T----TGAGGCCCTCA------GACG------------------AGC.......................................................................................................................................................................................................................................................................1911.0010010
.............................................................................................................ATTAGCT----TGAGGCCCTCA------GACG------------------AGC.......................................................................................................................................................................................................................................................................2511.0010010
...............................................................................................................................................................................G------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTG.............................................................................................................................................................2111.0011000
......................................................................................................................................................................TGTGCGACCG------------------CGTCAGGTTTGG-------------------------------------GA....................................................................................................................................................................................2411.0010001
..................................................................................................................................................................................................CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---.........................................................................................................................................................2111.0010001
............................................................................................................................................G------------------AGCAACATGTGCGACCG------------------C......................................................................................................................................................................................................................................1911.0010001
................................................................................................................................................................................................................................................................................................................................................................................GAATCCTGGTCGGATGCGGCA....................................2111.0010100
..............................................................................................................................CCTCA------GACG------------------AGCAACATGTGC..............................................................................................................................................................................................................................................................2111.0010001
...............................................................................................................................................................AGCAACATGTGCGACCG------------------C......................................................................................................................................................................................................................................1811.0010010
.............................................................................................................................CCCTCA------GACG------------------AGCAACATGTGCG.............................................................................................................................................................................................................................................................2311.0010001
..............................................................................................................................................................................CG------------------CGTCAGGTTTGG-------------------------------------GAC-----------------TACTGC---TA.......................................................................................................................................................2511.0010100
...................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTCGGATGCGGCAACCC................................2211.0010010
droYak3
TGCGCTG----------------------------------AA-AG--CTCTGACTGAACACCAGTATTGTTGAGTGGC-------ATT-------GTTAATTGATCGCATTAGCA----TCGGGCCCTCA------GACG------------------AGCAACATGTACGATCGTATC---AG---CAGTAACATTAGGTTTGG-------------------------------------GGC-----------------AACTGC---TATGTACTC---------ATCGAAA----CAGAGAAGAT-AGCATCAATAATCCA----------AA-TGATT-----TTCTGTTCCACAGAGAAGGAATTCTGGTCGGATGCGGCAACCCGCTGCTAGACATCTCCGCCG------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................CGGATGCGGCAACCCGCTGCTAGAC......................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCTGGTCGGATGCGGCAACCCGCTG............................2511.00100100000000
..........................................................................................................................................ACG------------------AGCAACATGTACGATCGTATC---AG---CA...........................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................GGAATTCTGGTCGGATGC........................................1811.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................GAAGGAATTCTGGTCGGATGCGGC.....................................2411.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................AATTCTGGTCGGATGCGGCAACCCGCT.............................2711.00100000010000
.........................................................................................................................................GACG------------------AGCAACATGTACGATCGTATC---AG---C............................................................................................................................................................................................................................................2811.00100000010000
............................................................ACCAGTATTGTTGAGTGGC-------...................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGGAATTCTGGTCGGATGCGGC.....................................2311.00100100000000
droEre2
TGCGCTG----------------------------------AA-AG--CTCTGGCTGAACACG----ATGTTTAGAGGC-------ATC-------GTTAATTGGGCGCATTAGCA----TCAGTCCCTCA------GACG------------------AGCAACATGTGCGATCCTATA---AG---CAGTAGCATTAGGTTTGG-------------------------------------GGC-----------------TATTAC---TATATACTC---------ATCGAAA----CAGAGAAGAT-AGCACTAATAATCCA----------AA-TGATT-----TTCTGTTTCACAGAGAAGGAACCCTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCG------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................TCGGATGCGGCAACCCGCTGCTGGAC......................2611.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGCAACCCGCTGCTGGACAT....................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................GGTCGGATGCGGCAACCCGCTGC...........................2311.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................GGATGCGGCAACCCGCTGCTGGACAT....................2611.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................ACCCTGGTCGGATGCGGC.....................................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................ACCCTGGTCGGATGCGGCAACCCGCT.............................2611.0010000100
............................................................................................................................................................................................................................................................................................................................................................................GAAGGAACCCTGGTCGGATGCGGC.....................................2411.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................AGAAGGAACCCTGGTCGGATG.........................................2111.0010000100

Generated: 05/17/2015 at 03:47 AM