dvi_20847

exon [dvir_GLEANR_13754:4]; CDS [Dvir\GJ13899-cds]; exon [dvir_GLEANR_13754:5]; CDS [Dvir\GJ13899-cds]; intron [Dvir\GJ13899-in]

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TCTGAGCACCTGTTCCTTATTACTTATTGTGATGGCACTTCTGGACAACGGTGAGTTCCAGTCGCAAAGGCTTAGTTGTGCATTTACTTGTCAAGACTGCAAACACGCTTCGAACCGGTTAGAGCCTGCAATTTATCAATGATAATAGAGTCGGTACGAGTGTAGCCTATTTTTATTGGTTTTGCATTGCTGTTACTTTTGATTCAAGTGCTTATAAGATGTAGCTTAATATTTCCTTTAATTATAGATTATTCCACATTGTCTTGGTATCTGTACTTTCTGGCCAAAATGTGCTCA ************************************************.....((..(((...(((((....((((.((.....(((((.(((........(((...(((((..(((...(((.(((((...((((((((.(((((.((...(((....)))))))))).)))))))).)))))..)))...)))))))).....))))))))))).....)).))))....))))).)))..))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060670 9_testes_total	SRR060676 9xArg_ovaries_total	SRR060679 140x9_testes_total	SRR060685 9xArg_0-2h_embryos_total	V047 embryo	SRR060682 9x140_0-2h_embryos_total	GSM1528803 follicle cells	M027 male body	SRR1106714 embryo_2-4h	SRR1106729 mixed whole adult body	SRR060672 9x160_females_carcasses_total
..................................................................................................................................................................................................................................................TATAGATTGTTCCACATTGTC..................................	21	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................ATTGTCTTGGTATCTGTACTT...................	21	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................AATTATAGATTGTTCCACATTGT...................................	23	1	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATTATCCAATATTGTCTTGGTAT...........................	23	3	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAACGATTATTCCACATTGTCTTGGT.............................	26	3	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................AAGGCTAAGTTGTGCATC.....................................................................................................................................................................................................................	18	2	7	0.29	2	0	0	0	0	0	2	0	0	0	0	0
.................................................................................................................GCCGGTTAGACCCTGCA.......................................................................................................................................................................	17	2	4	0.25	1	0	0	0	0	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................CTTGGCGTCGGTACTTTCTG...............	20	3	4	0.25	1	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................ATGTTTATTGGGTTTGCAT..............................................................................................................	19	2	15	0.20	3	0	0	0	0	0	0	3	0	0	0	0
..................................................................AAGGCTAAGTTGTGC........................................................................................................................................................................................................................	15	1	9	0.11	1	0	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................ACTTTCTGGCTAAAAT.......	16	1	19	0.05	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................CAGCAATCTTTCAATGATAA........................................................................................................................................................	20	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1
...................................................................................................................................TTTATCAATGGTAGGAGAG...................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0

AGACTCGTGGACAAGGAATAATGAATAACACTACCGTGAAGACCTGTTGCCACTCAAGGTCAGCGTTTCCGAATCAACACGTAAATGAACAGTTCTGACGTTTGTGCGAAGCTTGGCCAATCTCGGACGTTAAATAGTTACTATTATCTCAGCCATGCTCACATCGGATAAAAATAACCAAAACGTAACGACAATGAAAACTAAGTTCACGAATATTCTACATCGAATTATAAAGGAAATTAATATCTAATAAGGTGTAACAGAACCATAGACATGAAAGACCGGTTTTACACGAGT ************************************************.....((..(((...(((((....((((.((.....(((((.(((........(((...(((((..(((...(((.(((((...((((((((.(((((.((...(((....)))))))))).)))))))).)))))..)))...)))))))).....))))))))))).....)).))))....))))).)))..))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060668 160x9_males_carcasses_total	V047 embryo
........................ATTACACTGCCGTGAAAACCT............................................................................................................................................................................................................................................................	21	3	5	0.20	1	1	0
...............GAATAATGAATAAAACTAAGGT....................................................................................................................................................................................................................................................................	22	3	8	0.13	1	0	1

Species	Coordinate	ID	Alignment
droVir3	scaffold_13049:20910807-20911103 +	dvi_20847	TCTGAGCACCTGTTCCTTATTACTTA--TTGTGATGGCACTTCTGGACAAC---------GGTGAGTTCC---------------------------------------------AGTCGCAAAGGCTTAGTTGTGCATTTACTTGTCAA------------GACTGCAAACACG-----------------CTTCGAACCGGTT---AGA--GC-----------------------------CTGCAATTTATCAATGATAATAGAGTCGGTACGAGT------GTAGCCTATTTTTATT---GGTTTTGCATTGCTGTTACTTTTGATTCAAGTGCTTATAAGATGTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATATTTCCTTTAATTATAGATTATTCCACATTGTCTTGGTATCTGTACTTTCTGGCCAAAATGTGCTC-----A
droMoj3	scaffold_6680:15256436-15256488 +		TAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATCCAACAGTGTCGTGGCATCTCTTCTTTCTGGCTCAAATGGCCAA-----C
droGri2	scaffold_15110:22792981-22793290 -		CCTCACCACTTGTTCCATTTTACTGA--TCGTAATGGCGCTTTTGGAAAAG---------GGTGAGATTAAAGAACTTTTATATAATATCAGAAAAATAAATTTCAATAAACTTGAATG--------------------------T------------------ACTCGG-----ATATGTA-------GTA----------------TGGATATTTT---------CATGGCGATAATATAAACTGAGATGCACATAAAATATCTTACTCGGTACACAA------TTACAA------TTTT---GCATTTTCAAAGTTTTCGTTTTTGAATAATAACATTA---------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAA--------TCTAA----ATT-----AATTTCATTTTCCAGATTACCCAACATTCTCTTTGTGTCTGTACTTTCTGTGT----------CTGTAAA
droWil2	scf2_1100000004762:1868558-1868627 -		AATCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTTTCAGATAACTATGCTGGATCTTTGACTCTATTTCTCATTGGCAAATTGGCCAT-----T
dp5	XR_group8:6027750-6027972 +		TCTGCGCATCGATGCTCCTCTGTGCGGTTTGCATGGGCGCCTCCG-CTGGCATTGCACCAGGTAAG-----------------------------------------------------------------CTA----------------------------------------------------------GAGGAAATATACTTCT----------TTATTAAGT------------------------------------------------------------------------------------------------------------------ATTAAAGATAGCCCAAGATTGCCTTTGGCAATGTCTAGAAAATGTATAAATTAGGCAATCACT-----------------------------------------------------------------------------------------------------------CGTAT--------CTTTCTTCCTAGATAACTACGCTGGCGCCCTGACATTGTTTCTTATTGGAAAGCTGGCTAT-----C
droPer2	scaffold_45:456057-456279 -		TCTGCGCATCGATGCTCCTCTGTGCGGTCTGCATGGGCGCCTCCG-CTGGCATTGCACCAGGTAAG-----------------------------------------------------------------CCA----------------------------------------------------------GAGGAAATATATTTCT----------TTATTAAGT------------------------------------------------------------------------------------------------------------------ATTAAAGATAGCCCAAGATTGCCTTTGGCAATGTCTAGAAAATGTATAAATTAGGCAATCACT-----------------------------------------------------------------------------------------------------------CGTAT--------CTTTCTTCCTAGATAACTACGCTGGCGCCCTGACATTGTTTCTTATTGGCAAGCTGGCTAT-----C
droAna3	scaffold_13337:21073715-21073855 +		TAGCTTTCCTTTCTTGTTTTTGTTGC--CTT-------------TAA---------------GAAGT------------------------------------------------------------------------------------------------------------------------------ATAGAATCGATT------------------GATT---------------------------------------------------------------------------------------------------------------------A-----------------------------------------------TTAACATTGTTT-----------------------------------------------------------------------------------------------------------CGTACAATTCTTCCTCTCCGATTAGTTTATCCCCTGACATCGTCACTCCTGTATTTCCTGGCCAAGATGACCTC-----C
droBip1	scf7180000396707:352235-352290 -		GCTGTTTAGCTGCGCGTCCCTACTTC--TGGCGGCGGCAGCCACGGATGAA---------GGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droKik1	scf7180000302441:2109574-2109661 -		AAAAAGTAGCTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGATGTCTCTCTTTCTTCCAGATAACTATGCGGGTTCTCTAACCCTGTTCCTAATTGGCAAGCTGGCCAT-----C
droFic1	scf7180000453945:107629-107900 +		TCTGTGCCTCGATGCTCCTCTGCGCCATTTGCATGGGAGCCTCAG-CTGGAGTCGCAGCAGGTAAG-----------------------------------------------------------------TGATGCTTTAAGTTTCAAATTAATACTAATTGAGTGCAA-----ATGCGCAATTGTATTTT----------------AAGGCAT-----------------------------CTGATTTTTACAGAAAATATC-------------------------------------------------------------------------------------------AGACTGCCT----------------------------------------------------CGACATACATTTGTTTTAATTTAATTTAATTTATTTTTCATACATTTAATTGAA-------------------------------------------------------ATATTTGCAGATAACTACGCTGGTTCCCTGACCCTGTTCCTGATTGGAAAGCTGGCCAT-----T
droEle1	scf7180000491199:898017-898073 -		CCAATTTACTTGTGCCGCCCTGCTCC--TGGCAGTGGCCGCCACGGATGAA---------GGTGAGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000780246:12356-12636 -		CCAATTCACTTGTGCGGCCCTGCTCT--TGGCAGTGGCTGCCACGGATGAA---------GGTGAGCTTG---------------------------------------------TGTT--------------------------T------------------GGACTG-----GTGCTCGAAAGAATTTA----------------TCAACATTTA---------CATTTCGGTAAAATCAACCAAAA---------------ACTTTCGGTATGAGTCATTTAATTGGTTATTTTTATCAAGGG----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATATCTGTATTCGAATGGAATTCAACGCCAAATTCAAACTCTAATCCTTTC------GACTCTTCCAACAGCGTTCCCACTGACCTCCTCAATACTTTACTTTCTGGCAAAAATGACGTC-----C
droBia1	scf7180000302377:1340758-1340990 -		TCTGCGCCTCAATGCTGCTATGTGCCATCTGCATGGGTGCCTCTG-CGGGAGTGCCAGAAGGTAAT-----------------------------------------------------------------A---------------------------------------------------------------------ACCTCTC----------TAGC-----TAATTTAATAAGTTTAATACAAC---------------CCCT-------------GAACAAAGGTTCTTCTAAACCAGAG------------------------------------------------------------------------------------------------TTGTAAAAAGATTCC------------------------------------------------------------AATGGTT--TCACAGCAG-----------------CCCTATGTGTTCTCCTTTTTCAGATAACTACGCGGGATCGCTGACTCTGTTCCTAATTGGGAAGCTGGCCAT-----C
droTak1	scf7180000414002:96193-96433 +		AATGCTGCTC----------TGTGCCATCTGCATGGGCGCCTCTG-CGGGAGTGCCAGAAGGTATT-----------------------------------------------------------------A-------------------------------------------------------------------------------------------------------TTAGTTAAATTTGAA---------------CCTT-------------TAATTAGGGTG---------------------------------------------GTAAATAAGTATAGCCCA-------------CAAATTGTAGGTCATCTCTCAATTAGACTCTCAATTGGAAAATGATTTCTAAATACCTTTGTATTAAT------------------------------TGTA------------------------------------------AAA--------CTTTATTTTCAGATAACTACGCGGGTTCTCTGACCCTGTTCCTAATTGGAAAGCTGGCCAT-----C
droEug1	scf7180000409472:781397-781469 +		ATTTAACTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTCCAACAGGATACCCTCTGACGTCTTCGATTCTTTACTATCTGGCAAAAATGGTGTC-----C
dm3	chr3L:21950440-21950525 +		TAATAGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTGATTTCCCCTTAGATAACTACGCGGGCTCTCTGGCCCTGTTCCTAATTGGAAAGCTGGCCAT-----C
droSim2	3l:21462081-21462135 +		CCAGTTCACTTGTGCAGTCCTCCTCC--TTGCAGTGGCTGCCACGGATGAA---------GGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2	scaffold_11:1872378-1872432 +		CCAGTTCACTTGTGCAGTCCTCCTCC--TTGCAGTGGCTGCCACGGATGAA---------GGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3	v2_chr3L_random_299:3334-3492 +		CCAGTTCACTTGTGCAGTCCTTCTCC--TTGCAGTGGCTGCCACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TGGTTAACT---------------------------------------------------------------------------------------------------------------------AAAAATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTTGTGCTTGATAAGTGTACCCTGTGACCTCTTCCACACTGTACTTCCTTGCAAAAATGACGTC-----C
droEre2	scaffold_4784:21624277-21624321 +		TCTGCGCCTCGATGCTGCTCTGTGCCATTTGCATGGGTGCTTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

TCTGAGCACCTGTTCCTTATTACTTA--TTGTGATGGCACTTCTGGACAAC---------GGTGAGTTCC---------------------------------------------AGTCGCAAAGGCTTAGTTGTGCATTTACTTGTCAA------------GACTGCAAACACG-----------------CTTCGAACCGGTT---AGA--GC-----------------------------CTGCAATTTATCAATGATAATAGAGTCGGTACGAGT------GTAGCCTATTTTTATT---GGTTTTGCATTGCTGTTACTTTTGATTCAAGTGCTTATAAGATGTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATATTTCCTTTAATTATAGATTATTCCACATTGTCTTGGTATCTGTACTTTCTGGCCAAAATGTGCTC-----A	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCTTGGTATCTGTACTT........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droMoj3

TAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATCCAACAGTGTCGTGGCATCTCTTCTTTCTGGCTCAAATGGCCAA-----C	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

CCTCACCACTTGTTCCATTTTACTGA--TCGTAATGGCGCTTTTGGAAAAG---------GGTGAGATTAAAGAACTTTTATATAATATCAGAAAAATAAATTTCAATAAACTTGAATG--------------------------T------------------ACTCGG-----ATATGTA-------GTA----------------TGGATATTTT---------CATGGCGATAATATAAACTGAGATGCACATAAAATATCTTACTCGGTACACAA------TTACAA------TTTT---GCATTTTCAAAGTTTTCGTTTTTGAATAATAACATTA---------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAA--------TCTAA----ATT-----AATTTCATTTTCCAGATTACCCAACATTCTCTTTGTGTCTGTACTTTCTGTGT----------CTGTAAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

AATCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTTTCAGATAACTATGCTGGATCTTTGACTCTATTTCTCATTGGCAAATTGGCCAT-----T	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTATGCTGGATCTTTGA..................................	22	1	1.00	1	0	0	1	0	0

dp5

TCTGCGCATCGATGCTCCTCTGTGCGGTTTGCATGGGCGCCTCCG-CTGGCATTGCACCAGGTAAG-----------------------------------------------------------------CTA----------------------------------------------------------GAGGAAATATACTTCT----------TTATTAAGT------------------------------------------------------------------------------------------------------------------ATTAAAGATAGCCCAAGATTGCCTTTGGCAATGTCTAGAAAATGTATAAATTAGGCAATCACT-----------------------------------------------------------------------------------------------------------CGTAT--------CTTTCTTCCTAGATAACTACGCTGGCGCCCTGACATTGTTTCTTATTGGAAAGCTGGCTAT-----C	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................GCATGGGCGCCTCCG-CTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTACGCTGGCGCCCT....................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

TCTGCGCATCGATGCTCCTCTGTGCGGTCTGCATGGGCGCCTCCG-CTGGCATTGCACCAGGTAAG-----------------------------------------------------------------CCA----------------------------------------------------------GAGGAAATATATTTCT----------TTATTAAGT------------------------------------------------------------------------------------------------------------------ATTAAAGATAGCCCAAGATTGCCTTTGGCAATGTCTAGAAAATGTATAAATTAGGCAATCACT-----------------------------------------------------------------------------------------------------------CGTAT--------CTTTCTTCCTAGATAACTACGCTGGCGCCCTGACATTGTTTCTTATTGGCAAGCTGGCTAT-----C	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.......................GCGGTCTGCATGGGCGCCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.............GCTCCTCTGTGCGGTCTGCATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.CTGCGCATCGATGCTCCTCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.........CGATGCTCCTCTGTGCGGTCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
........................................CTCCG-CTGGCATTGCACCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0

droAna3

TAGCTTTCCTTTCTTGTTTTTGTTGC--CTT-------------TAA---------------GAAGT------------------------------------------------------------------------------------------------------------------------------ATAGAATCGATT------------------GATT---------------------------------------------------------------------------------------------------------------------A-----------------------------------------------TTAACATTGTTT-----------------------------------------------------------------------------------------------------------CGTACAATTCTTCCTCTCCGATTAGTTTATCCCCTGACATCGTCACTCCTGTATTTCCTGGCCAAGATGACCTC-----C	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

GCTGTTTAGCTGCGCGTCCCTACTTC--TGGCGGCGGCAGCCACGGATGAA---------GGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AAAAAGTAGCTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGATGTCTCTCTTTCTTCCAGATAACTATGCGGGTTCTCTAACCCTGTTCCTAATTGGCAAGCTGGCCAT-----C	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCTGTGCCTCGATGCTCCTCTGCGCCATTTGCATGGGAGCCTCAG-CTGGAGTCGCAGCAGGTAAG-----------------------------------------------------------------TGATGCTTTAAGTTTCAAATTAATACTAATTGAGTGCAA-----ATGCGCAATTGTATTTT----------------AAGGCAT-----------------------------CTGATTTTTACAGAAAATATC-------------------------------------------------------------------------------------------AGACTGCCT----------------------------------------------------CGACATACATTTGTTTTAATTTAATTTAATTTATTTTTCATACATTTAATTGAA-------------------------------------------------------ATATTTGCAGATAACTACGCTGGTTCCCTGACCCTGTTCCTGATTGGAAAGCTGGCCAT-----T	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CCAATTTACTTGTGCCGCCCTGCTCC--TGGCAGTGGCCGCCACGGATGAA---------GGTGAGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CCAATTCACTTGTGCGGCCCTGCTCT--TGGCAGTGGCTGCCACGGATGAA---------GGTGAGCTTG---------------------------------------------TGTT--------------------------T------------------GGACTG-----GTGCTCGAAAGAATTTA----------------TCAACATTTA---------CATTTCGGTAAAATCAACCAAAA---------------ACTTTCGGTATGAGTCATTTAATTGGTTATTTTTATCAAGGG----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATATCTGTATTCGAATGGAATTCAACGCCAAATTCAAACTCTAATCCTTTC------GACTCTTCCAACAGCGTTCCCACTGACCTCCTCAATACTTTACTTTCTGGCAAAAATGACGTC-----C	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TCTGCGCCTCAATGCTGCTATGTGCCATCTGCATGGGTGCCTCTG-CGGGAGTGCCAGAAGGTAAT-----------------------------------------------------------------A---------------------------------------------------------------------ACCTCTC----------TAGC-----TAATTTAATAAGTTTAATACAAC---------------CCCT-------------GAACAAAGGTTCTTCTAAACCAGAG------------------------------------------------------------------------------------------------TTGTAAAAAGATTCC------------------------------------------------------------AATGGTT--TCACAGCAG-----------------CCCTATGTGTTCTCCTTTTTCAGATAACTACGCGGGATCGCTGACTCTGTTCCTAATTGGGAAGCTGGCCAT-----C	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AATGCTGCTC----------TGTGCCATCTGCATGGGCGCCTCTG-CGGGAGTGCCAGAAGGTATT-----------------------------------------------------------------A-------------------------------------------------------------------------------------------------------TTAGTTAAATTTGAA---------------CCTT-------------TAATTAGGGTG---------------------------------------------GTAAATAAGTATAGCCCA-------------CAAATTGTAGGTCATCTCTCAATTAGACTCTCAATTGGAAAATGATTTCTAAATACCTTTGTATTAAT------------------------------TGTA------------------------------------------AAA--------CTTTATTTTCAGATAACTACGCGGGTTCTCTGACCCTGTTCCTAATTGGAAAGCTGGCCAT-----C	Size	Hit Count	Total Norm	Total
No Reads

droEug1

ATTTAACTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTCCAACAGGATACCCTCTGACGTCTTCGATTCTTTACTATCTGGCAAAAATGGTGTC-----C	Size	Hit Count	Total Norm	Total
No Reads

dm3

TAATAGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTGATTTCCCCTTAGATAACTACGCGGGCTCTCTGGCCCTGTTCCTAATTGGAAAGCTGGCCAT-----C	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCCTGTTCCTAATTGGAAAGCT............	27	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATAACTACGCGGGCTCTCTGGC.................................	25	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTACGCGGGCTCTCTGGC.................................	23	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTACGCGGGCTCTCTGGCCCTGT............................	28	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCCTAATTGGAAAGCTGGCC........	23	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTACGCGGGCTCTCTGGCCCTGT............................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTTCCTAATTGGAAAGCTGGCC........	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTTCCTAATTGGAAAGCTGG..........	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTACGCGGGCTCTCTGGC.................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTACGCGGGCTCTCTGGCC................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTGGAAAGCTGGCCAT-----C	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAACTACGCGGGCTCTCTGGC.................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TAGAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTGATTTCCCCTTAGA......................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

CCAGTTCACTTGTGCAGTCCTCCTCC--TTGCAGTGGCTGCCACGGATGAA---------GGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.......................TCC--TTGCAGTGGCTGCCACGGATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................TCCTCC--TTGCAGTGGCTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droSec2

CCAGTTCACTTGTGCAGTCCTCCTCC--TTGCAGTGGCTGCCACGGATGAA---------GGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

droYak3

CCAGTTCACTTGTGCAGTCCTTCTCC--TTGCAGTGGCTGCCACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TGGTTAACT---------------------------------------------------------------------------------------------------------------------AAAAATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATTTGTGCTTGATAAGTGTACCCTGTGACCTCTTCCACACTGTACTTCCTTGCAAAAATGACGTC-----C	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGTGCTTGATAAGTGTACCCTG..............................................	26	1	57.00	57	0	56	0	0	1	0	0	0	0	0	0
....................TTCTCC--TTGCAGTGGCTGCCACGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	31.00	31	0	1	0	0	0	0	0	0	0	0	30
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGTGCTTGATAAGTGTACCC................................................	24	1	16.00	16	0	16	0	0	0	0	0	0	0	0	0
......................................TGCCACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................	27	1	14.00	14	0	1	0	0	0	0	0	0	0	0	13
..............................................................TAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TGGTT................................................................................................................................................................................................................................................................................................................................................................................	25	1	10.00	10	0	1	0	1	0	0	0	0	0	0	8
..............................................................TAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TGGT.................................................................................................................................................................................................................................................................................................................................................................................	24	1	10.00	10	0	1	0	0	0	0	0	0	0	0	9
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGTGCTTGATAAGTGTACCCT...............................................	25	1	8.00	8	0	6	2	0	0	0	0	0	0	0	0
..........TGTGCAGTCCTTCTCC--TTGCAGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	8.00	8	0	0	0	0	0	0	0	0	0	0	8
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCTTCCACACTGTACTTCCTTG...................	27	1	8.00	8	0	8	0	0	0	0	0	0	0	0	0
......CACTTGTGCAGTCCTTCTCC--TTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	7.00	7	0	7	0	0	0	0	0	0	0	0	0
.............................TGCAGTGGCTGCCACGGATGCA---------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	6.00	6	0	5	1	0	0	0	0	0	0	0	0
..........TGTGCAGTCCTTCTCC--TTGCAGTGGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	5.00	5	0	0	0	0	0	0	0	0	0	0	5
............TGCAGTCCTTCTCC--TTGCAGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCTTCCACACTGTACTTCCTTGCA.................	28	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCTTCCACACTGTACTTCCTT....................	26	1	4.00	4	0	3	1	0	0	0	0	0	0	0	0
.................TCCTTCTCC--TTGCAGTGGCTGCCACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
.......................TCC--TTGCAGTGGCTGCCACGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
.................TCCTTCTCC--TTGCAGTGGCTGCCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
.....................TCTCC--TTGCAGTGGCTGCCACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCTTCCACACTGTACTTCCTTGC..................	28	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.............................TGCAGTGGCTGCCACGGATGCA---------GGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	2	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCTTCCACACTGTACTTCCTTGCA.................	29	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGTGCTTGATAAGTGTACCCTGT.............................................	27	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.....................TCTCC--TTGCAGTGGCTGCCACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
....................TTCTCC--TTGCAGTGGCTGCCACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.................TCCTTCTCC--TTGCAGTGGCTGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.................TCCTTCTCC--TTGCAGTGGCTGCCACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCTTCCACACTGTACTTCC......................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
......CACTTGTGCAGTCCTTCTCC--TTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACCTCTTCCACACTGTACTTCCT.....................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
....................TTCTCC--TTGCAGTGGCTGCCACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCTTCCACACTGTACTTCCTTG...................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACCTCTTCCACACTGTACTTCC......................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
....TTCACTTGTGCAGTCCTTCTCC--TTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCTTCCACACTGTACTTCCTTGC..................	27	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCCACACTGTACTTCCTTGCAAAAA.............	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
............................TTGCAGTGGCTGCCACGGATGCA---------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
......................................TGCCACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACC......................................................................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
..AGTTCACTTGTGCAGTCCTTCTCC--T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGCTTGATAAGTGTACCC................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................TTGCAGTGGCTGCCACGGATGCA---------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......CACTTGTGCAGTCCTTCTCC--TTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTTCCTTGCAAAAATGACGTC-----.	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGCTTGATAAGTGTACCCTGT.............................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACACTGTACTTCCTTGCAAAAA.............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGTGCTTGATAAGTGT....................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCTTCCACACTGTACTTCC......................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................TCTCC--TTGCAGTGGCTGCCACGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................CACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACC......................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....TTCACTTGTGCAGTCCTTCTCC--TTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........TTGTGCAGTCCTTCTCC--TTGCAGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCTTCCACACTGTACTTC.......................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....TCACTTGTGCAGTCCTTCTCC--TTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................TAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TGG..................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........CTTGTGCAGTCCTTCTCC--TTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....TCACTTGTGCAGTCCTTCTCC--TTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGTGCTTGATAAGTGTACC.................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....TTCACTTGTGCAGTCCTTCTCC--TTGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................TCCTTCTCC--TTGCAGTGGCTGCCACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............TGCAGTCCTTCTCC--TTGCAGTGGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGCTTGATAAGTGTACCCTG..............................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................GGCTGCCACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATG...........................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACCTCTTCCACACTGTACTTC.......................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCTTCCACACTGTACTTCCTTGCA.................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTTCCTTGCAAAAATGACG........	23	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCCACACTGTACTTCCTTGCAAA...............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................TGCAGTGGCTGCCACGGATGCA---------GGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................GTCCTTCTCC--TTGCAGTGGCTGCCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATAAGTGTACCCTG..............................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCACACTGTACTTCCTTGCAAAA..............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........CTTGTGCAGTCCTTCTCC--TTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCTTCCACACTGTACTTCCT.....................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................ACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACC......................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....TCACTTGTGCAGTCCTTCTCC--TTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................TAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TGGG.................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTACTTCCTTGCAAAAATGACGTC-----.	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....TCACTTGTGCAGTCCTTCTCC--TTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACCTCTTCCACACTGTAC..........................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACACTGTACTTCCTTGCAAAAAT............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....TTCACTTGTGCAGTCCTTCTCC--TTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................CACGGATGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCT.....................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................CA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TG...................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGTGCTTGATAAGTGTAC..................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................CC--TTGCAGTGGCTGCCACGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................TAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------TGGTTAAC.............................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................TCCTTCTCC--TTGCAGTGGCTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................TGCA---------GGTAAGC------------------------------------------------------------------------------------------------------------------------------ATGGAACCTATTTTG----------.....................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGCTTGATAAGTGTACCCTG..............................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

TCTGCGCCTCGATGCTGCTCTGTGCCATTTGCATGGGTGCTTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dvi_20847

scaffold_13049:20910857-20911053 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads