ID:

dvi_20736

 Coordinate:

scaffold_13049:20286657-20286807 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.6 -13.6 -13.6

Flybase annnotation

CDS [Dvir\GJ11455-cds]; exon [dvir_GLEANR_11492:2]; intron [Dvir\GJ11455-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTAATTGATTTATGGCACACCTGAGTTTTTCCTCGAGAGTTTTGCACTGTGTTCGGCGTAAATGTCCAAACTCTGATTAAACAAAACCGACTAAACGCCAGCTAACCAACCAAATCCAATCATTCCGGCTTGAATCACGCAGAGCAACCCCTGAATTTAGTTCATATTTATTAATTTCTCACTCTTTAATCAATTTTTAGTTGCTGCCAATGCGCCTGCAAAATGGTCATGAGCATTATATGCTCTTTCA
**************************************************.(((.(((((....(((......................)))...)))))))).........................((((..........)))).......(((.(((((........))))).)))......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060664
9_males_carcasses_total
 SRR060680
 9xArg_testes_total
 V047
embryo
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060684
140x9_0-2h_embryos_total
 V116
male body		 SRR060689
160x9_testes_total
 M028
head
 V053
head
........................................................................................................................................................................................................................CTGCAAAATGGTCATGAGC................ 19 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTGCAAAATGGTCATGAG................. 18 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAATGCGCCTGCAAAATGGTCATGAGC................ 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCTGCAAAATGGTCATGAGC................ 20 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGCAAAATGGTCATGAGC................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................TTTCCTCGAGAGTTTTGCACTGT........................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAATGCGCCTGCAAAATGGTC...................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AATGCGCCTGCAAAATGGTCATGAGC................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCCAATGCGCCTGCAAAATGGTC...................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCAAAATGGTCATGAGCATTATATGC....... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................AATCATTCCGGATTGAATCACGCAGA........................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAAAGCGCCTGCAAAATGGTC...................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AAACCGACTAAACGCCAGCT................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................CTGCAAAATGGTCATGAGCATTATATGC....... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAATGCGCCTGCAAAATGGTCATGAG................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................TAACTGTACAAACTTTGATTAAA......................................................................................................................................................................... 23 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................CGCAACCCCTGTCTTTAGT......................................................................................... 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................CTGTTGCTGCCAATGCGCC.................................. 19 2 17 0.12 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ACTCTGGTTAAATAAAACC.................................................................................................................................................................. 19 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................CTGGAAGAACGCAGAGCAAC...................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................GTTTCCTCCAGAGTTTTGAA............................................................................................................................................................................................................ 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................CTGCAGAATGGTCATTA.................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................TACTGCCAATGCGCCTGGT.............................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AGATTAACTAAATACCGTGTGGACTCAAAAAGGAGCTCTCAAAACGTGACACAAGCCGCATTTACAGGTTTGAGACTAATTTGTTTTGGCTGATTTGCGGTCGATTGGTTGGTTTAGGTTAGTAAGGCCGAACTTAGTGCGTCTCGTTGGGGACTTAAATCAAGTATAAATAATTAAAGAGTGAGAAATTAGTTAAAAATCAACGACGGTTACGCGGACGTTTTACCAGTACTCGTAATATACGAGAAAGT
**************************************************.(((.(((((....(((......................)))...)))))))).........................((((..........)))).......(((.(((((........))))).)))......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 SRR060666
160_males_carcasses_total
 V116
male body		 M047
female body
 SRR060663
160_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 V053
head
 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060688
160_ovaries_total
..................................................................................GTTTTGGCGGATTTGCGGG...................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTCGTGCGTCTCTTTGGAG................................................................................................... 19 3 20 0.95 19 0 7 4 0 0 0 4 0 0 0 0 2 0 0 1 1 0
.....................................................................................................................................TTCGTGCGTCTCTTTGGAGA.................................................................................................. 20 3 9 0.67 6 0 1 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0
...................TGGACTCATTAAGGAGCT...................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................GTTTTGGCGGATGTGCGG....................................................................................................................................................... 18 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGGTGGTTTACGTTAGTAA.............................................................................................................................. 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTTTTGGCGGATGTGCGG....................................................................................................................................................... 19 3 18 0.44 8 6 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................GTAAGGCCGACATTAGTG................................................................................................................ 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CAAACTTCGTGCGTCTCTTTG...................................................................................................... 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TGGCTGATTTGCGTTCAATG................................................................................................................................................. 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AATCAACGACTGTTACGCA................................... 19 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................ATTGGTTAGTGTAGGTTA.................................................................................................................................. 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TAAAGAGTGAGGTAATAGTTA........................................................ 21 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TGTTTTGGCGGATGTGCGGG...................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................ATTGACATGTTTGAAACTAAT........................................................................................................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................GTTTGGCTGATGTGCGG....................................................................................................................................................... 17 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................ACAGCTTGGAGACTAATTTT........................................................................................................................................................................ 20 3 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTAAAGAGTAAGAAGTTA............................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................AGGGACGTAAATCAAGAATAA.................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:20286607-20286857 - dvi_20736 TCTAATTGATTTATGGCACACC-----TGAGTT--TTTCCTCG-----------------------------------------------------AGAGTTTTGCACTGTGTTCGGCGTAAATGT--CC----------AAA-----CTCTGATTAAACAAAACCGACTAAACG-C-CAGCTAACCAACCAAATCCA---------------------ATCATTCCGGCTTGAATCACGCAG------------------------------AGCAACCCCTGAATTTAGTT------------------------------------CATATTTAT-----TAA---------TTTCTCACT--CTTTAATC----------------AATTTTTAGTTGCTGCCAATGCGCCTGCAAAATGG-TCATGAGCATTATATGCTCTT------TCA
droMoj3 scaffold_6680:7989981-7990049 - TTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCTTTCCTCTAGTTGCTGTTCATGCGCTTTTAAAATGC-TAATGAGCATCATTTGCTCGT------TCA
droGri2 scaffold_15110:19880858-19880977 + CTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAGTT------------------------------------GATATTAAA--------TG-AAATCTTTTCAAAC---TCCTAATTTTTCACTGTTTTTTATCCTTTTTAGTTGTTGCGAATGCGCATGCAAAATGG-TCTTGAGCATTATATGCTCCT------TCA
droWil2 scf2_1100000004949:1831035-1831139 - AACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC------------------------------------TATATTTAT-TATT---TGTAA----------------CCAATTCTATATT----TCTTACATCTTTTAGTTGCTGTGAATGCGCTTGTAAAATGG-TATTGAGTATACTCTGCTCAT------TCA
dp5 XR_group6:240244-240350 + TAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------CATATTCAA-----ATA---------TATCTTACTCTCTCTAATCCATCTGT----GTTATCCATTTTAGCTGCTGTAACTGTGCCTGCAAAATGC-TGATGAGCATTATCTGCTCAA------TCA
droPer2 scaffold_12:926135-926241 + AGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATTCAA-----ATA---------TGTCTTACTCTCTCTAATCCATCAGT----GTTATCCGTTTTCCCTGCTGCAACTGTGCCTGCAAGACGCGCGACGAGCATTCTCTGCTCAA------TCG
droAna3 scaffold_13337:17351259-17351343 + ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACT------------------------------------TATATTAA--------------------------------------AAA--T---TCTTTTTTATTTCAGTTGCTGCAACTGCGCCTGCAAAATGC-TAATGAGCATCATCGTCTCTG------CCC
droBip1 scf7180000396741:652419-652674 + GCAGAATTGGATATGGAACTAC-----TGAATA--TTTAATGGAGTTGAACTCTTACTTTTATACTTACATATATCAAGGGCCAAAAATCGATATGGAAGTATTGT-------TA-----------------------GTCGG---------------------------------------------------TCATGCA-----------------------------------------ATAATTAACTAGAAGTTCATATACAACTTAAAGGGGTTTA-A-CCCTAACC------------------------------------CATGCC--------------AA----------ATCCTTTAATATCTAAT--CATTACTTCTTTATTTCAGCTGCTGCAACTGCGCCTGCAAAATGC-TAATGAGCATTATCGTCTCCG------CCC
droKik1 scf7180000302686:1245713-1245967 + ATTAATGGGGATATTGAAGATCTATTCTGCTTTCTTATTTGTG-----------------------------------------------------AAAGCATTGTCTTAACTTTGAAACTAATGA--CTCATTTCCGGTAAG---------------------------------------------------CCATGGA-----------------------------------------T------------------------------AAGGGTTCTTAGGATTAGTTTAAAGTTTTAAGAACAGAAATATTCAAACTATATTCGATCTCTTATAATA---TAT-----------AAGCCTCTCTAACCCAATCTC---TTTATATCCTTTCAGCTGCTGCAATTGCGCCTGCAAAATGC-TTATGAGCATTATCTTCTCAG------CTC
droFic1 scf7180000454065:1798989-1799041 + TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGCTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGTATCGTGTTTTCT----------
droEle1 scf7180000491000:899119-899186 - TTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--C---TCTTTATCCTTACAGCTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTTTCT----------
droRho1 scf7180000759459:87-176 + TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCAC-----------------------AAGTTTTCTAATTCGAA--C---TCCATATCTTTACAGTTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTTTCT----------
droBia1 scf7180000302334:885875-885932 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGCTGTTCCTGCGCCTGCAAGATGC-TTTTGAGCATCGTGTTTTCCGCGCTCCTCA
droTak1 scf7180000415795:932970-933184 - TGAACTAAGC-----------T-----TGA--------------------------------------------------------------------------GTCATAATTTTCAAATCCATCTATTGTATTTCTCGAAAA-----TT--------------CTAATCAATCTGATTTGACTAA----AAGATCAAAGATTGGCCTTCTAGGATGAGAATATTTTCGAATATATTACAC----------------------------------------------------------------------------------------CAAG-------------TT-AA----------AACTTTTCTAATTCAAT--T---TCCATATCTTTACAGCTGCTGCTCGTGCGCCTGCAAGATGC-TTTTGAGCATCGTGTTTTCT----------
droEug1 scf7180000408844:242196-242287 - TTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTACTAACCCAGT--T---TCTATATCTTTTCAGCTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTCTCTGCGCTCCTCA
dm3 chr3L:15511083-15511271 - TACAAGCATC------------------------------------------------------------------------------------------------------------CTAAGTAT--TC----------GGGATTCAACCTGATTGAAATGAACTAATTGAACTGATCTGACAAC----AAGATCTGA------------------------------------------------------------------------------------------------------------------CATCCAGGATATCTC-CATCTTG-ATCATG---TGTAA----------AACTTTTCTAATCAGATCTT---TCCATATCCTTGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTTTCT----------
droSim2 3l:15144667-15144754 - ATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-----------CAACTTTTCTAATCAGATTTT---TCTATATCCTTGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCT----------
droSec2 scaffold_0:7620586-7620662 - TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCAGATTTT---TCTATATCCTTGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCT----------
droYak3 3L:18027024-18027089 - ACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TCTATATTTTTGCAGTTGCTGCTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCC----------
droEre2 scaffold_4784:17768972-17769024 - TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCC----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TCTAATTGATTTATGGCACACC-----TGAGTT--TTTCCTCG-----------------------------------------------------AGAGTTTTGCACTGTGTTCGGCGTAAATGT--CC----------AAA-----CTCTGATTAAACAAAACCGACTAAACG-C-CAGCTAACCAACCAAATCCA---------------------ATCATTCCGGCTTGAATCACGCAG------------------------------AGCAACCCCTGAATTTAGTT------------------------------------CATATTTAT-----TAA---------TTTCTCACT--CTTTAATC----------------AATTTTTAGTTGCTGCCAATGCGCCTGCAAAATGG-TCATGAGCATTATATGCTCTT------TCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATGG-TCATGAGC......................1916.006006000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATGG-TCATGAG.......................1813.003002000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCGCCTGCAAAATGG-TCATGAGC......................2712.002000000000000002000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAAAATGG-TCATGAGC......................2012.002001000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATGG-TCATGAGC......................1811.001000000000000000000000000000000000000000000000000000000000001000
...................................TTTCCTCG-----------------------------------------------------AGAGTTTTGCACTGT.........................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCGCCTGCAAAATGG-TC............................2111.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AATGCGCCTGCAAAATGG-TCATGAGC......................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCCAATGCGCCTGCAAAATGG-TC............................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATGG-TCATGAGCATTATATGC.............2611.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................AAACCGACTAAACG-C-CAGCT.................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATGG-TCATGAGCATTATATGC.............2811.001000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCGCCTGCAAAATGG-TCATGAG.......................2611.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCTTTCCTCTAGTTGCTGTTCATGCGCTTTTAAAATGC-TAATGAGCATCATTTGCTCGT------TCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................CATGCGCTTTTAAAATGC-TAATGAGC......................2612.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCTTTTAAAATGC-TAATGA........................2311.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTAAAATGC-TAATGAGCAT....................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATGCGCTTTTAAAATGC-T.............................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTAAAATGC-TAATGAGC......................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATGCGCTTTTAAAATGC-TAATG.........................2611.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTTTAAAATGC-TAATGAG.......................2111.001100000
droGri2
CTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAGTT------------------------------------GATATTAAA--------TG-AAATCTTTTCAAAC---TCCTAATTTTTCACTGTTTTTTATCCTTTTTAGTTGTTGCGAATGCGCATGCAAAATGG-TCTTGAGCATTATATGCTCCT------TCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGAATGCGCATGCA.....................................1821.00220
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAAATGG-TCTTGAGC......................1921.00211
.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGAATGCGCATGCAAAATG................................2320.50110
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATGG-TCTTGAGCATT...................2120.50101
droWil2
AACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC------------------------------------TATATTTAT-TATT---TGTAA----------------CCAATTCTATATT----TCTTACATCTTTTAGTTGCTGTGAATGCGCTTGTAAAATGG-TATTGAGTATACTCTGCTCAT------TCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGTAAAATGG-TATTGAGT......................2115.00501310
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAAAATGG-TATTGAGT......................1912.00201100
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGTGAATGCGCTTGTA.....................................2112.00202000
......................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCGCTTGTAAAATGG-T.............................2012.00201100
....................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGCGCTTGTAAAATGG-T.............................2212.00200200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGTATACTCTGCTCAT------T..2112.00202000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGAATGCGCTTGTAAAATGG-TAT...........................2611.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGAATGCGCTTGTAAAATGG-T.............................2411.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGTGAATGCGCTTGT......................................2011.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGCGCTTGTAAAATGG-TATTGA........................2711.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGAATGCGCTTGTAAAAT.................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTGTAAAATGG-TATTGA........................2011.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGTAAAATGG-TATTGAGTATA...................2411.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGTGAATGCGCTTGTAAAAT.................................2511.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGCGCTTGTAAAAT.................................1911.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTTGTAAAATGG-TATTGA........................2111.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAATGG-TATTGAGTATA...................2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GG-TATTGAGTATACTCTGCTCAT------T..2411.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGCGCTTGTAAAATGG-T.............................2111.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGTAAAATGG-TATTGAGC......................2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGCGCTTGTAAAATGG-TAT...........................2411.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................AATGG-TATTGAGTATACTCTGCT............2311.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCTTGTAAAATGG-T.............................1811.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAAAATGG-TATTGAGTATA...................2211.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................G-TATTGAGTATACTCTGCTC...........2011.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCTTGTAAAATGG-TATTGA........................2311.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGTATACTCTGCTC...........1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAATGG-TATTGAGTATAC..................2111.00100010
dp5
TAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------CATATTCAA-----ATA---------TATCTTACTCTCTCTAATCCATCTGT----GTTATCCATTTTAGCTGCTGTAACTGTGCCTGCAAAATGC-TGATGAGCATTATCTGCTCAA------TCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATGC-TGATGAGC......................1919.0090900000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCAAAATGC-TGATGAGC......................2115.0050500000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTAACTGTGCCTGCAAAATGC-TGAT..........................2714.0040300001000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTAACTGTGCCTG.......................................1914.0040400000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCCTGCAAAATGC-TGATGAGC......................2513.0030300000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCTGCAAAATGC-TGAT..........................2013.0030300000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGCCTGCAAAATGC-TGATGAGC......................2713.0030300000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGTGCCTGCAAAATGC-..............................2112.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCAAAATGC-TGATGAG.......................2012.0020110000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTAACTGTGCCTGCAAAATGC-TGAT..........................2812.0020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATGC-TGATGAGC......................1812.0020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTAACTGTGCCTGCAAAATGC-T.............................2412.0020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTAACTGTGCCTGCA.....................................2112.0020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTAACTGTGCCTGC......................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCCTGCAAAATGC-TGAT..........................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCCTGCAAAATGC-TGAT..........................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACTGTGCCTGCAAAATGC-TGAT..........................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGCCTGCAAAATGC-..............................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCCTGCAAAATGC-TGATG.........................2311.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGTGCCTGCAAAATGC-TGATGAGC......................2911.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTAACTGTGCCTGCAAAATG................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCAAAATGC-TGAT..........................1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTAACTGTGCCTGCAAAATGC-..............................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCAAAATGC-TGATGA........................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAACTGTGCCTGCAAAATGC-T.............................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGTGCCTGCAAAATGC-TG............................2311.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGCAAAATGC-TGATGAGC......................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGTGCCTGCAAAATGC-T.............................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTAACTGTGCCTGCAA....................................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAAAATGC-TGATGAGC......................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGTGCCTGCAAAATGC-TGAT..........................2511.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACTGTGCCTGCAAAATGC-..............................2211.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGTGCCTGCAAAATGC-TGATGA........................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCTGCAAAATGC-TGATGAGC......................2311.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATGC-TGATGAGCA.....................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGTGCCTGCAAAA..................................1811.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGCCTGCAAAATGC-TGATGAG.......................2611.0010100000000
droPer2
AGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATTCAA-----ATA---------TGTCTTACTCTCTCTAATCCATCAGT----GTTATCCGTTTTCCCTGCTGCAACTGTGCCTGCAAGACGCGCGACGAGCATTCTCTGCTCAA------TCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACT------------------------------------TATATTAA--------------------------------------AAA--T---TCTTTTTTATTTCAGTTGCTGCAACTGCGCCTGCAAAATGC-TAATGAGCATCATCGTCTCTG------CCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATGC-TAATGAGC......................1912.002110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-TAATGAGCATCATCGTCTCTG------CC.2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCAAAATGC-TAATGAGCAT....................2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAATGC-TAATGAGCAT....................2111.001000100
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAACTGCGCCTGCAAAATGC-T.............................2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC-TAATGAGCATCATCGTCT............2311.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGC-TAATGAGCATCATCGTCTCT..........2711.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAAATGC-TAATGAGC......................2211.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGCAACTGCGCCTGC......................................2011.001100000
droBip1
GCAGAATTGGATATGGAACTAC-----TGAATA--TTTAATGGAGTTGAACTCTTACTTTTATACTTACATATATCAAGGGCCAAAAATCGATATGGAAGTATTGT-------TA-----------------------GTCGG---------------------------------------------------TCATGCA-----------------------------------------ATAATTAACTAGAAGTTCATATACAACTTAAAGGGGTTTA-A-CCCTAACC------------------------------------CATGCC--------------AA----------ATCCTTTAATATCTAAT--CATTACTTCTTTATTTCAGCTGCTGCAACTGCGCCTGCAAAATGC-TAATGAGCATTATCGTCTCCG------CCCSizeHit CountTotal NormTotal
No Reads
droKik1
ATTAATGGGGATATTGAAGATCTATTCTGCTTTCTTATTTGTG-----------------------------------------------------AAAGCATTGTCTTAACTTTGAAACTAATGA--CTCATTTCCGGTAAG---------------------------------------------------CCATGGA-----------------------------------------T------------------------------AAGGGTTCTTAGGATTAGTTTAAAGTTTTAAGAACAGAAATATTCAAACTATATTCGATCTCTTATAATA---TAT-----------AAGCCTCTCTAACCCAATCTC---TTTATATCCTTTCAGCTGCTGCAATTGCGCCTGCAAAATGC-TTATGAGCATTATCTTCTCAG------CTCSizeHit CountTotal NormTotal
No Reads
droFic1
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGCTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGTATCGTGTTTTCT----------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--C---TCTTTATCCTTACAGCTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTTTCT----------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCAC-----------------------AAGTTTTCTAATTCGAA--C---TCCATATCTTTACAGTTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTTTCT----------SizeHit CountTotal NormTotal
No Reads
droBia1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGCTGTTCCTGCGCCTGCAAGATGC-TTTTGAGCATCGTGTTTTCCGCGCTCCTCASizeHit CountTotal NormTotal
No Reads
droTak1
TGAACTAAGC-----------T-----TGA--------------------------------------------------------------------------GTCATAATTTTCAAATCCATCTATTGTATTTCTCGAAAA-----TT--------------CTAATCAATCTGATTTGACTAA----AAGATCAAAGATTGGCCTTCTAGGATGAGAATATTTTCGAATATATTACAC----------------------------------------------------------------------------------------CAAG-------------TT-AA----------AACTTTTCTAATTCAAT--T---TCCATATCTTTACAGCTGCTGCTCGTGCGCCTGCAAGATGC-TTTTGAGCATCGTGTTTTCT----------SizeHit CountTotal NormTotal
No Reads
droEug1
TTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTACTAACCCAGT--T---TCTATATCTTTTCAGCTGCTGTTCGTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTCTCTGCGCTCCTCASizeHit CountTotal NormTotal
No Reads
dm3
TACAAGCATC------------------------------------------------------------------------------------------------------------CTAAGTAT--TC----------GGGATTCAACCTGATTGAAATGAACTAATTGAACTGATCTGACAAC----AAGATCTGA------------------------------------------------------------------------------------------------------------------CATCCAGGATATCTC-CATCTTG-ATCATG---TGTAA----------AACTTTTCTAATCAGATCTT---TCCATATCCTTGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TCCTGAGCATCGTGTTTTCT----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TCCTGAGC......................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCCTGCGCCTGCAAGAT.................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGAGCATCGTGTTTTCT----------2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCTGCAAGATGC-TC............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CATATCCTTGCAGCTGCTG...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GC-TCCTGAGCATCGTGTTT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCCTGCGCCTGCAAGATGC-T.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCCTGCGCCTGCAAGA..................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGTTCCTGCGCCTGCAA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCTGCAAGATGC-TCCTGAGCATCGT.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CATG---TGTAA----------AACTTTTCTAATCAGAT..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGTTCCTGCGCCTGCAAGAT.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCCTGCGCCTGCAAG...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCCTGCGCCTGCAAGATGC-..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGCGCCTGCAAGAT.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAAGATGC-TCCTGAGC......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGATGC-TCCTGAGCA.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGATGC-TCCTGAGCAT....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTTCCTGCGCCTGCAA....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GATGC-TCCTGAGCATCGTGT...............2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TCCTG.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GC-TCCTGAGCATCGTGTTTTCT----------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TCCTGA........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AATTGAACTGATCTGACAAC----AAGA......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGCATCGTGTTTTCT----------1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATGC-TCCTGAGCATCGTGT...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-----------CAACTTTTCTAATCAGATTTT---TCTATATCCTTGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCT----------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATGC-TGCTGAGCAT....................1911.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGATGC-TGCTGAGCATCGTGTT..............2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCTGAGC......................2211.00100010000000000000
droSec2
TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCAGATTTT---TCTATATCCTTGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCT----------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGCATCGTGTTTTCT----------2011.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAAGATGC-TGCTGAGC......................2011.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGCCTGCAAGATGC-..............................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCCTGCGCCTGCAAGA..................................2111.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCCTGCAAGATGC-TGCTGAGC......................2511.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGCCTGCAAGATGC-TGCTG.........................2311.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCCTGCGCCTGCAAGATGC-TGCT..........................2711.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCTGAGCATCGTGTT..............3011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATGC-TGCTGAGCAT....................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCTGAGC......................2211.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGCCTGCAAGATGC-TG............................2011.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCTG.........................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................TT---TCTATATCCTTGCAGCTGC.....................................................2111.0010100
droYak3
ACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TCTATATTTTTGCAGTTGCTGCTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCC----------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCTGAGC......................2221.00211000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GC-TGCTGAGCATCGTGTTTTCC----------2221.00200100010000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCAAGATGC-TGCTGAGCATCGT.................2620.50101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGCCTGCAAGATGC-TGCTGAGCAT....................2820.50101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTCCTGCGCCTGCA.....................................1920.50101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCCTGCAAGATGC-TGCTG.........................2220.50100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGCTCCTGCGCCTGCAAGATGC-..............................2620.50101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCTGAGCA.....................2320.50101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCCTGCGCCTGCAAGAT.................................2120.50101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTCCTGCGCCTGCAAGATG................................2420.50101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGATGC-TGCTGAGCA.....................2020.50100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGCTCCTGCGCCTGCA.....................................2120.50101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC-TGCTGAGCATCGTGTTTTCC----------2420.50101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGCCTGCAAGATGC-TG............................2020.50100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTGCGCCTGCAAGATGC-..............................2120.50101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGCTCCTGCGCCTGCAAGATGC-..............................2720.50100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C-TGCTGAGCATCGTGTTTTCC----------2120.50101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTGCGCCTGCAAGATGC-TGCT..........................2420.50100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCTGA........................2020.50100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTCCTGCGCCTGCAAGAT.................................2320.50100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGCCTGCAAGATGC-TGCTGA........................2420.50100000010000
droEre2
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGCTGCTGTTCCTGCGCCTGCAAGATGC-TGCTGAGCATCGTGTTTTCC----------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGCATCGTGTTTTCC----------2012.0022000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC-TGCTGAGCATCGTGTTTTCC----------2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCCTGCGCCTGCAAGATGC-..............................2411.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C-TGCTGAGCATCGTGTTTTCC----------2111.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGCGCCTGCAAGA..................................1811.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-TGCTGAGCATCGTGTTTTCC----------2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCTGCAAGATGC-TGCTGAGC......................2311.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAGATGC-TGCT..........................1820.5010001000

Generated: 05/16/2015 at 09:00 PM