ID:

dvi_20728

 Coordinate:

scaffold_13049:20271823-20271973 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.9 -10.7 -10.4

Flybase annnotation

CDS [Dvir\GJ13859-cds]; exon [dvir_GLEANR_13718:1]; intron [Dvir\GJ13859-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
  1. scaffold_12822:1481215-1481234 +
  2. scaffold_12823:1570203-1570222 +
  3. scaffold_12875:15461114-15461133 +
  4. scaffold_12875:16567174-16567193 +
  5. scaffold_12875:18087867-18087886 -
  6. scaffold_12928:6735948-6735967 -
  7. scaffold_12963:5093296-5093315 +
  8. scaffold_12963:8636682-8636701 +
  9. scaffold_12963:9198611-9198630 -
  10. scaffold_12963:19324820-19324839 -
  11. scaffold_13047:6320838-6320857 +
  12. scaffold_13047:6987783-6987802 +
  13. scaffold_13047:15464533-15464552 -
  14. scaffold_13049:4951821-4951840 +
  15. scaffold_13049:8419586-8419605 -
  16. scaffold_13049:14101152-14101171 +
  17. scaffold_13049:14863162-14863181 -
  18. scaffold_13049:19545207-19545226 +
  19. dvi_20728  scaffold_13049:20271878-20271897 +
  20. scaffold_13049:22010971-22010990 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGCAGCAGCGATGTTTATCCCGTTGGACCGTTTTTGGGCGGTATTGTGCTGTAAGTAAAAAAAAACCCATAAAAAACACAAAATAGCGCCGCTTGACTGCACACACACACACACACAGACAAACACACAGATAGCAATAGAAAAAATCACAAATTGTAGCCGTGTGAAATTGATTAAATTTTTTGAATTGTCGCCATGACGCTGCCAAATGGCGGCAGGCTTGGAACCAAACAAAAAAAGAGGGGGGGGGG
**************************************************........................................((......))...........((....(((((.(((((.....(((((..............)))))....)))))(((((.....)))))......)))))....))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 GSM1528803
follicle cells		 M061
embryo
 SRR060665
9_females_carcasses_total
 M028
head
 V047
embryo
 V116
male body		 SRR060658
140_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 M027
male body		 SRR060679
140x9_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 V053
head
 SRR060666
160_males_carcasses_total
 SRR060678
9x140_testes_total
......AGCGATGTTTATCCCGTTGGACCGT............................................................................................................................................................................................................................ 25 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ACACAAAATAGCGCCGCTTTACTG........................................................................................................................................................ 24 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GATGTTTATCCCGTTGGACC.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TTATCCCGTTGGACCGTTTTTGGGC.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......GCGATGTTTATCCCGTTGGACCGTTCC......................................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TGGACCGTTTTTGGGCGGTATT.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GATGTTTATCCCGTTGGACCGTTTT......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................GTTTTTGGGCGGTATTGTGCTCACA..................................................................................................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GTTTTTGGGCGGTATTGT............................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATCCCGTTGGACCGTTTTTGG...................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GCAGCGATGTTTATCCCGTTGGACC.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCGATGTTTATCCCGTTGGACCGTT........................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GATGTTTATCCCGTTGGAC............................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATAGATGTTTATCCCGTTGGACC.............................................................................................................................................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCGATGTTTATCCCGTTG.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............TATCCCGTTGGACCGTTTTTGGGC.................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CGTTGGACCGTTTTTGGGCGGTAT............................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GTTTTTGGGCGGTATTGTG........................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...AGCAGCGATGTTTATCCCGTTGGACC.............................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ATTAAATTTTTTGAACTGTC........................................................... 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................TGTCCTGGAAGTAAAAAAAAA.......................................................................................................................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TGACTTGTAGCCACGACGCT................................................ 20 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAATGGAGGCAGGCTTACAAC........................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GGCGGGAGGCTTTGAAGCA...................... 19 3 16 0.31 5 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 0 0
.................................TTGGGCGGTATTGTGCTCACA..................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................GGCGGGAGGCTTTGAAGCAA..................... 20 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATGGCGGCAGGAATGGAGCC....................... 20 3 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CACACACACACAGACAAACA.............................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CACACACACACACACAGACAA................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................GCTGGTAAATGGCGGGAGG................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGCAACCGTGTGAAATCGA.............................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CCGTCGTCGCTACAAATAGGGCAACCTGGCAAAAACCCGCCATAACACGACATTCATTTTTTTTTGGGTATTTTTTGTGTTTTATCGCGGCGAACTGACGTGTGTGTGTGTGTGTGTCTGTTTGTGTGTCTATCGTTATCTTTTTTAGTGTTTAACATCGGCACACTTTAACTAATTTAAAAAACTTAACAGCGGTACTGCGACGGTTTACCGCCGTCCGAACCTTGGTTTGTTTTTTTCTCCCCCCCCCC
**************************************************........................................((......))...........((....(((((.(((((.....(((((..............)))))....)))))(((((.....)))))......)))))....))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M027
male body		 V047
embryo
 V053
head
 SRR060679
140x9_testes_total
 V116
male body
..............................................................................................................................................................................................AGCGGTACTGCGACGGTTTAC........................................ 21 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................CACACTTTAACTAATTTAAA...................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................CCGCCGTCCGAACCTTGGTT..................... 20 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................GGTACTGCGACGGTTTACCG...................................... 20 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................TCCGGCCCTTGGTTTGTTTT............... 20 2 2 0.50 1 0 0 1 0 0 0
.......AGCTCCAAATTGGGCAACC................................................................................................................................................................................................................................. 19 3 5 0.20 1 0 0 0 1 0 0
.............................................................................................ACTGACGTGTGTGTGTGTGTAT........................................................................................................................................ 22 1 13 0.08 1 0 0 0 0 1 0
.......CGCTACAAATTTGGCAAGC................................................................................................................................................................................................................................. 19 3 14 0.07 1 0 0 1 0 0 0
........................................................................................................TGTGTGTGTGTGTCTGTTTGT.............................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:20271773-20272023 + dvi_20728 GGCAGCAGCGATGTTTATCCCGTTGGACCGTTTTTGGGCGGTATTGTGCTGTAAGTAAAAAA---------AAAC-CCATAAAAAACA-------------------CAAAA-----TAGCGCCGCTTGACTGCA----CACA----CACACACA-------------CA----------CAGACAAACA------------C----------------------------------------AC----------AGATAG------CAATA---GAAAA-------A----A------------TCACAAATTGTAGCCGTGTGA-------AATTGATTAAATT------------TTTTGAAT---TGTCGCCATGACGCTGCCAAATGGCG--GCAGGCTTGGAACCAAACAAAAAAAGAGGGGGGGGGG
droMoj3 scaffold_6680:7974842-7975104 + GGCAGCAGCGATATTTATCCCATTGGACCATTTCTAGGCGGTATAGTGCTGTAAGTGCTATA---------ATTCTAAACAAACCGTAAACAAA---ATA---------GTGCAATTT---CACGCTCAACTGCA----CACA----AACACATA-------------CA----------GAAACTAACA------------CTAGAACACTAATATAGATA-----------GA----------------------------------------------------C-AA-AAAA-GTAGC--------ATTTGCAACTGTGTAT-------AATTGATTAAATT------------TTTTGAAT---TGTCGCCATGACGGTGCCAAATGGGTTAGA--------GAACGAGTGACATATGTGGGAGGTGGG
droGri2 scaffold_5168:3843-4129 + CAGTCTAGCGATGTTTATCCCGTCGAACCGTTTTTGGGCGGAATTGTGCTGTGAGTGTT-TA-CCTATATGTTCCCAAGCATATTCGAACGAAA---ATG-------TAA--------TTAAATGCAATGCCGCACACACACA----CACACATA-------------GA----------GAGACGAACA------------C----------------------------------------AC----------ACACAGAACAGTGCTCA---ACAAA-------C-AA-ATAA-AAAAT--------AATTGCAACTGTGTGA-------AATTGATTACATTTGTTGAATTGTTTTTTGAGT---TGTCGCCATGACACTGCAAAATGATGCAGAA-------AGTTGAACGAAGTTAAGGGGAGTAAAG
droWil2 scf2_1100000004768:448361-448574 - GGAAGCAGCGATGTCTATCCCGTTGGTCCATTTCTTGGTGGTATTGTTTTGTAAGTAAATTT---------T-TG-------------TCTA-------------------------TTTTTACGGTTCACTAAT----CCCACAAAAACAC-------------ACACACACT--CAAA------------CCCA--------------------TAGAAA-----------------------G-----------------------------------------AGAG-AATA-GCATTAC------ATTTGAATCTGTGTGA------AAATTGATTAAATTTCGTTTTTTTCTTTTTGAATTTTTGTAGCCATGACACTGGCGCAT-------------------------------------------
dp5 XR_group6:257102-257249 - GGCAGCAGCGATGTTTATCCAGTCGGACCGTTTCTAGGCGGCGTGGTCCTGTAAGTAC-------------------------------------------------------------GTGCCCCTGCACTACA----CACA---------------------------CT--------------------------------------------------------------------------------------------------------------------------------GT-CATCGAAGGGTGCATCTGTGTGG------GCATTGATTAAATT-------------TTTGAAT---TGTCGCCATGACACCGCAGAAT-------------------------------------------
droPer2 scaffold_12:944353-944500 - GGCAGCAGCGATGTTTATCCAGTCGGACCGTTTCTAGGCGGCGTGGTCCTGTAAGTAC-------------------------------------------------------------GTGCCCCTGCACTACA----CACA---------------------------CT--------------------------------------------------------------------------------------------------------------------------------GT-CATCGAAGAGTGCATCTGTGTGG------GCATTGATTAAATT-------------TTTGAAT---TGTCGCCATGACACCGCAGAAT-------------------------------------------
droAna3 scaffold_13337:17368489-17368669 - GGTAGCAGCGACGTCTATCCCGTGGGTCCATTCCTGGGCGGAGTGGTGCTGTAAGTACA-T-------------------------------------------------------------ATGCTCCACTGCG----CAC-----GG---------GGAACAAAAA--------CGAA----------------------------------------------------------------------TAAAAAACTAT------GTG-----------GTGGAAA----AACA-AAAGC--------GCCTGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------
droBip1 scf7180000396741:669510-669696 - GGTAGCAGCGACGTCTACCCCGTTGGACCATTCCTGGGCGGAGTGGTGCTGTAAGTACCCCA----------------------------------------------------------GCATGCTTCACTGCG----CACA---------------------------CAGTCGCCAA----------------------------------------------------------------------TGAAAAGCTAT------GCGGCTAT------GTGGAAA----AACA-AAAGT-G-----GCACTGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------
droKik1 scf7180000302686:1264647-1264820 - GGCAGCAGCGATGTTTATCCCGTGGGTCCATTTCTGGGCGGAGTGGTGCTGTAAGTATTCT-------------------------------------------------CC-----TCGTAATGCTTCACTGCA----TCAA---CGACAC-------------------------AAAAAAA------AAACTA--------------------TAGCTAGGCA--------------------------------------------------------------------------GG--------CGGCGCATCTGTGTGG-------AATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACGCCACAGAAT-------------------------------------------
droFic1 scf7180000454065:1815657-1815879 - GGTAGCAGCGATGTCTATCCCGTGGGTCCGTTTCTCGGCGGAGTGGTGCTGTAAGTTCT-CA---------ATTC-GCGTAGAAAGTGTCGCATTAAGTG---------GTT-----CCGTAATGCTCCACTGCA----GACC----CACAT------------------------CAAACAAA--------AAAA------------------------------------T-GA-------AA----------AGAAAT------GAAAA---AAAAA-------A-AA-CTAA-AATGT--------CAGCGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------
droEle1 scf7180000491000:877128-877295 + GGCAGCAGCGATGTCTACCCGGTGGGTCCGTTTCTCGGCGGAGTGGTGCTGTGAGTA--------------------------------------------------------------------CTCCACTGCA----TA-----CGACAC------------------------CCAACAAA--------ACAA------------------------------------AGGAAAA------------------------------------------------AAATAAACA-AATGC-C------AAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTCAAAC---TGTCGTCATGACACCACAGAAT-------------------------------------------
droRho1 scf7180000779277:2727-2929 - GGCAGCAGCGATGTCTACCCGGTGGGTCCGTTTCTCGGCGGAGTGGTGCTGTAAGTTCT-CA---------ATTC-ACTTAGAAAGTGTCGCAGTAAGTG---------GTT-----CCGTAATGCTCCACTGCA----TG-----CGACAT------------------------CAAACAAA--------AT------------------------------------------------------AGA---------------------------------GAAA----AACA-AAAGC--------CAACGCATAAGTGTGG------GAATTGATTAAATT-------------TTCGAAC---TGTCGTCATGACACTACAGAAT-------------------------------------------
droBia1 scf7180000302334:911321-911520 - GGCAGCAGCGACGTCTACCCCGTGGGTCCATTTCTCGGCGGAGTGGTGCTGTAAGTGCC-CA---------ATTC-ACTCGGGCGGCGTAGCATTAAGTG---------CTT-----CCGTGATGCTCCACTGCT----TG-----CGCCAC------------------------C-----------------------------------------------------------AAA------GTGGGG---------------------------------GAAA----ACCA-GAAGT--------CGGCGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACCACAGAAT-------------------------------------------
droTak1 scf7180000415795:909138-909328 + GGTAGCAGCGATGTCTATCCCGTGGGTCCATTTCTCGGCGGAGTGGTGCTGTAAGTTCT-CA---------TTTC-TC------------------AGTGGGGATTCCGATT-----CCGTGATGCTCCACTGCA----TA-----TGG------------------------------------------------------------------------------GTGGCGGAA-T-----------------------------AAAAA---AG---------------TGAA-AAAGT--------GAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------
droEug1 scf7180000408844:220340-220552 + GGTAGCAGTGACATCTATCCCGTGGGTCCATTTCTCGGTGGAGTGGTGCTGTAAGTTCATCAA--------ATTG-ACTTAGAAAGTGTAGCATTAAGTG-------GGTTT-----TCGTGATGCTCCAATGAA----TG-----TGACATGTAAGGGGGT---------------------------------------------------------------------------------------------------------CAAAA---AGAAAA-----AA----AACA-AATGC--------CAGTGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------
dm3 chr3L:15494311-15494521 + GGTAGCAGCGACGTCTACCCGGTGGGCCCATTTCTCTTCGGAGTGGTGCTGTAAGTAACCTA---------ATT-------------------------G-------GGATT-----CCGTGATGCTCCACTGCA----TG-----CGACAT------------------------CGAAAAAA------AAACTAGTG-----------------------GGCAGGGGGCAGGAAAA------GCGAGT---------------------------------GAAA--AGAACA-AAAGC--------CAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTAGAAC---TGTCGCCATGACAGCACAGAAT-------------------------------------------
droSim2 3l:15127776-15127990 + dsi_1957 GGTAGCAGCGACGTCTACCCGGTGGGCCCGTTTCTCTTCGGAGTGGTGCTGTAAGTAACCTA---------ATT-------------------------G-------GGATT-----CCGTGATGCTCCACTGCA----TA-----CGACAT------------------------CGAGGAA--------AACTAGTG-----------------------GGCAGGGGGCAGGAAAAGCGAAAGCGAGT---------------------------------TAAA--AACACA-AAAGC--------CAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACAGCACAGAAT-------------------------------------------
droSec2 scaffold_0:7603686-7603892 + GGTAGCAGCGACGTCTACCCGGTGGGCCCATTTCTCTTCGGAGTGGTGCTGTAAGTAACCTA---------ATT-------------------------G-------GGATT-----CCGTGATGCTCCACTGCA----TA-----CGACAT------------------------CGAAGAA--------AACTAGTG-----------------------GGCAGGGGGCAGGAAAA------GCGAGT---------------------------------GAAA----AACA-AAAGC--------CAATGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACAGCACAGAAT-------------------------------------------
droYak3 3L:18009505-18009725 + GGTAGCAGCGACGTCTACCCCGTGGGACCTTTCCTCTTCGGAGTGGTGCTGTAAGTAGCCCA---------ATTG--------------------------------GCTGT-----CCGAGATGCTTCACTGCA----T------------------------------------CGCAGAG--------AACTAGTGGGGGCAGAAAACTAGT-----------GGGGGCAGGAAAA------GAGAGC---------------------------------GGAA--AACACAAAAAGG--------CAGCGCATCTGTGTGGGAATGGGAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACCACAGAAT-------------------------------------------
droEre2 scaffold_4784:17750270-17750446 + GGCAGCAGCGACGTCTACCCGGTGGGACCTTTTCTCTTCGGAGTGGTGCTGTAAGTAGC------------------------------------------------------------------CTCCACTGCA----T------------------------------------CGCAGAA--------CACCAGTG-----------------------G----GGGGCAGGA-AA------GAGAGC---------------------------------GGAA--ACTACA-AAAGC--------CAGCGCATCTGTGTGG------CAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACCACAGAAT-------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGCAGCAGCGATGTTTATCCCGTTGGACCGTTTTTGGGCGGTATTGTGCTGTAAGTAAAAAA---------AAAC-CCATAAAAAACA-------------------CAAAA-----TAGCGCCGCTTGACTGCA----CACA----CACACACA-------------CA----------CAGACAAACA------------C----------------------------------------AC----------AGATAG------CAATA---GAAAA-------A----A------------TCACAAATTGTAGCCGTGTGA-------AATTGATTAAATT------------TTTTGAAT---TGTCGCCATGACGCTGCCAAATGGCG--GCAGGCTTGGAACCAAACAAAAAAAGAGGGGGGGGGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......AGCGATGTTTATCCCGTTGGACCGT...................................................................................................................................................................................................................................................................................................................................................................................................................2515.005000000000000000000000000000000000000000000000000000000000000005
.........GATGTTTATCCCGTTGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............TTATCCCGTTGGACCGTTTTTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000100000000000000000000000000000000000000000000000000000
.......GCGATGTTTATCCCGTTGGACCGTTCC................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................TGGACCGTTTTTGGGCGGTATT.....................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.........GATGTTTATCCCGTTGGACCGTTTT................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
.............................GTTTTTGGGCGGTATTGT...................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
................ATCCCGTTGGACCGTTTTTGG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....GCAGCGATGTTTATCCCGTTGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
......AGCGATGTTTATCCCGTTGGACCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.........GATGTTTATCCCGTTGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
......AGCGATGTTTATCCCGTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000001000000000000000000000000000000000000000000000000000000
...............TATCCCGTTGGACCGTTTTTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
....................CGTTGGACCGTTTTTGGGCGGTAT......................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.............................GTTTTTGGGCGGTATTGTG..................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...AGCAGCGATGTTTATCCCGTTGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CACACACA-------------CA----------CAGACAAACA------------........................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CACA----CACACACA-------------CA----------CAGACAA.......................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
GGCAGCAGCGATATTTATCCCATTGGACCATTTCTAGGCGGTATAGTGCTGTAAGTGCTATA---------ATTCTAAACAAACCGTAAACAAA---ATA---------GTGCAATTT---CACGCTCAACTGCA----CACA----AACACATA-------------CA----------GAAACTAACA------------CTAGAACACTAATATAGATA-----------GA----------------------------------------------------C-AA-AAAA-GTAGC--------ATTTGCAACTGTGTAT-------AATTGATTAAATT------------TTTTGAAT---TGTCGCCATGACGGTGCCAAATGGGTTAGA--------GAACGAGTGACATATGTGGGAGGTGGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................CATTGGACCATTTCTAGGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
CAGTCTAGCGATGTTTATCCCGTCGAACCGTTTTTGGGCGGAATTGTGCTGTGAGTGTT-TA-CCTATATGTTCCCAAGCATATTCGAACGAAA---ATG-------TAA--------TTAAATGCAATGCCGCACACACACA----CACACATA-------------GA----------GAGACGAACA------------C----------------------------------------AC----------ACACAGAACAGTGCTCA---ACAAA-------C-AA-ATAA-AAAAT--------AATTGCAACTGTGTGA-------AATTGATTACATTTGTTGAATTGTTTTTTGAGT---TGTCGCCATGACACTGCAAAATGATGCAGAA-------AGTTGAACGAAGTTAAGGGGAGTAAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....CTAGCGATGTTTATCCCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101
.........................AACCGTTTTTGGGCGGAATTGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2520.50110
.............................................................................................................................................................................................................................................................................................................................................AATTGATTACATTTGTTGAAT................................................................................2120.50110
...............................TTTTGGGCGGAATTGTGCT................................................................................................................................................................................................................................................................................................................................................................................................1920.50110
droWil2
GGAAGCAGCGATGTCTATCCCGTTGGTCCATTTCTTGGTGGTATTGTTTTGTAAGTAAATTT---------T-TG-------------TCTA-------------------------TTTTTACGGTTCACTAAT----CCCACAAAAACAC-------------ACACACACT--CAAA------------CCCA--------------------TAGAAA-----------------------G-----------------------------------------AGAG-AATA-GCATTAC------ATTTGAATCTGTGTGA------AAATTGATTAAATTTCGTTTTTTTCTTTTTGAATTTTTGTAGCCATGACACTGGCGCAT-------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.GAAGCAGCGATGTCTATCCCGTTGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300120
............................CATTTCTTGGTGGTATTGT...................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..............CTATCCCGTTGGTCCATTTCTTGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTTGTAGCCATGACACTGG................................................2111.00100001
..............CTATCCCGTTGGTCCATTTCTTGGT...........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
dp5
GGCAGCAGCGATGTTTATCCAGTCGGACCGTTTCTAGGCGGCGTGGTCCTGTAAGTAC-------------------------------------------------------------GTGCCCCTGCACTACA----CACA---------------------------CT--------------------------------------------------------------------------------------------------------------------------------GT-CATCGAAGGGTGCATCTGTGTGG------GCATTGATTAAATT-------------TTTGAAT---TGTCGCCATGACACCGCAGAAT-------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...AGCAGCGATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
..............TTATCCAGTCGGACCGTTTCTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
.........GATGTTTATCCAGTCGGACCGTTTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........GATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...............................TTCTAGGCGGCGTGGTCCTGT..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................AGTCGGACCGTTTCTAGGCGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................GTTTCTAGGCGGCGTGGTCC.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........GATGTTTATCCAGTCGGACCGT...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
.............................GTTTCTAGGCGGCGTGGTCCT................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......AGCGATGTTTATCCAGTCGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
GGCAGCAGCGATGTTTATCCAGTCGGACCGTTTCTAGGCGGCGTGGTCCTGTAAGTAC-------------------------------------------------------------GTGCCCCTGCACTACA----CACA---------------------------CT--------------------------------------------------------------------------------------------------------------------------------GT-CATCGAAGAGTGCATCTGTGTGG------GCATTGATTAAATT-------------TTTGAAT---TGTCGCCATGACACCGCAGAAT-------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........GATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2018.008701000
...........TGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
...............TATCCAGTCGGACCGTTTCTAGG............................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
..CAGCAGCGATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
............GTTTATCCAGTCGGACCGTTTCTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
...............TATCCAGTCGGACCGTTTCTAGGCGGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
.GCAGCAGCGATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
..........ATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
..............TTATCCAGTCGGACCGTTTCTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......AGCGATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....GCAGCGATGTTTATCCAGTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............................CGTTTCTAGGCGGCGTGGTC..................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................CCGTTTCTAGGCGGCGTGGTC..................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...AGCAGCGATGTTTATCCAGTCGGACCG....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................ATCCAGTCGGACCGTTTCTAGGCGGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................GTCGGACCGTTTCTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
................ATCCAGTCGGACCGTTTCTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...AGCAGCGATGTTTATCCAGTCGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
droAna3
GGTAGCAGCGACGTCTATCCCGTGGGTCCATTCCTGGGCGGAGTGGTGCTGTAAGTACA-T-------------------------------------------------------------ATGCTCCACTGCG----CAC-----GG---------GGAACAAAAA--------CGAA----------------------------------------------------------------------TAAAAAACTAT------GTG-----------GTGGAAA----AACA-AAAGC--------GCCTGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................CTCCACTGCG----CAC-----GG---------GGAACA..............................................................................................................................................................................................................................................................................2119.009200322
.............................ATTCCTGGGCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2116.006100014
.............................................................................................................................CTCCACTGCG----CAC-----GG---------GGAAC...............................................................................................................................................................................................................................................................................2016.006100203
..............................................................................................................................TCCACTGCG----CAC-----GG---------GGAACA..............................................................................................................................................................................................................................................................................2014.004100120
.............................................................................................................................CTCCACTGCG----CAC-----GG---------GGAA................................................................................................................................................................................................................................................................................1913.003000201
...AGCAGCGACGTCTATCCCGTGGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................2512.002011000
.............................................................................................................................CTCCACTGCG----CAC-----GG---------GGAACAA.............................................................................................................................................................................................................................................................................2212.002000200
.............................ATTCCTGGGCGGAGTGGTGCTT...............................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
.........GACGTCTATCCCGTGGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................GTGGGTCCATTCCTGGGCGGA........................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.GTAGCAGCGACGTCTATCCCGTGGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.GTAGCAGCGACGTCTATCCCGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......AGCGACGTCTATCCCGTGGGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................A-T-------------------------------------------------------------ATGCTCCACTGCG----CAC-----G..............................................................................................................................................................................................................................................................................................1911.001000001
............................CATTCCTGGGCGGAGTGGTGCTC...............................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
..............................................................................................................................TCCACTGCG----CAC-----GG---------GGAACAA.............................................................................................................................................................................................................................................................................2111.001100000
.............................ATTCCTGGGCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
................................CCTGGGCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.......................GGGTCCATTCCTGGGCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.............................ATTCCTGGGCGGAGTGGTG..................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................ATTCCTGGGCGGAGTGGTGCTGT..............................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
GGTAGCAGCGACGTCTATCCCGTGGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................ATTCCTGGGCGGAGTGGTGC.................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......GCGACGTCTATCCCGTGGG........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.............................................................................................................................CTCCACTGCG----CAC-----GG---------GGAACT..............................................................................................................................................................................................................................................................................2111.001000001
...AGCAGCGACGTCTATCCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...AGCAGCGACGTCTATCCCGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......................TGGGTCCATTCCTGGGCGGAGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
............................CATTCCTGGGCGGAGTGGTG..................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................CATTCCTGGGCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...AGCAGCGACGTCTATCCCGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................TTCCTGGGCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................2420.501000001
................................CCTGGGCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................2240.251010000
droBip1
GGTAGCAGCGACGTCTACCCCGTTGGACCATTCCTGGGCGGAGTGGTGCTGTAAGTACCCCA----------------------------------------------------------GCATGCTTCACTGCG----CACA---------------------------CAGTCGCCAA----------------------------------------------------------------------TGAAAAGCTAT------GCGGCTAT------GTGGAAA----AACA-AAAGT-G-----GCACTGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GGCAGCAGCGATGTTTATCCCGTGGGTCCATTTCTGGGCGGAGTGGTGCTGTAAGTATTCT-------------------------------------------------CC-----TCGTAATGCTTCACTGCA----TCAA---CGACAC-------------------------AAAAAAA------AAACTA--------------------TAGCTAGGCA--------------------------------------------------------------------------GG--------CGGCGCATCTGTGTGG-------AATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACGCCACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGTAGCAGCGATGTCTATCCCGTGGGTCCGTTTCTCGGCGGAGTGGTGCTGTAAGTTCT-CA---------ATTC-GCGTAGAAAGTGTCGCATTAAGTG---------GTT-----CCGTAATGCTCCACTGCA----GACC----CACAT------------------------CAAACAAA--------AAAA------------------------------------T-GA-------AA----------AGAAAT------GAAAA---AAAAA-------A-AA-CTAA-AATGT--------CAGCGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGCAGCAGCGATGTCTACCCGGTGGGTCCGTTTCTCGGCGGAGTGGTGCTGTGAGTA--------------------------------------------------------------------CTCCACTGCA----TA-----CGACAC------------------------CCAACAAA--------ACAA------------------------------------AGGAAAA------------------------------------------------AAATAAACA-AATGC-C------AAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTCAAAC---TGTCGTCATGACACCACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGCAGCAGCGATGTCTACCCGGTGGGTCCGTTTCTCGGCGGAGTGGTGCTGTAAGTTCT-CA---------ATTC-ACTTAGAAAGTGTCGCAGTAAGTG---------GTT-----CCGTAATGCTCCACTGCA----TG-----CGACAT------------------------CAAACAAA--------AT------------------------------------------------------AGA---------------------------------GAAA----AACA-AAAGC--------CAACGCATAAGTGTGG------GAATTGATTAAATT-------------TTCGAAC---TGTCGTCATGACACTACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGCAGCAGCGACGTCTACCCCGTGGGTCCATTTCTCGGCGGAGTGGTGCTGTAAGTGCC-CA---------ATTC-ACTCGGGCGGCGTAGCATTAAGTG---------CTT-----CCGTGATGCTCCACTGCT----TG-----CGCCAC------------------------C-----------------------------------------------------------AAA------GTGGGG---------------------------------GAAA----ACCA-GAAGT--------CGGCGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACCACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GGTAGCAGCGATGTCTATCCCGTGGGTCCATTTCTCGGCGGAGTGGTGCTGTAAGTTCT-CA---------TTTC-TC------------------AGTGGGGATTCCGATT-----CCGTGATGCTCCACTGCA----TA-----TGG------------------------------------------------------------------------------GTGGCGGAA-T-----------------------------AAAAA---AG---------------TGAA-AAAGT--------GAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GGTAGCAGTGACATCTATCCCGTGGGTCCATTTCTCGGTGGAGTGGTGCTGTAAGTTCATCAA--------ATTG-ACTTAGAAAGTGTAGCATTAAGTG-------GGTTT-----TCGTGATGCTCCAATGAA----TG-----TGACATGTAAGGGGGT---------------------------------------------------------------------------------------------------------CAAAA---AGAAAA-----AA----AACA-AATGC--------CAGTGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACTACAGAAT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GGTAGCAGCGACGTCTACCCGGTGGGCCCATTTCTCTTCGGAGTGGTGCTGTAAGTAACCTA---------ATT-------------------------G-------GGATT-----CCGTGATGCTCCACTGCA----TG-----CGACAT------------------------CGAAAAAA------AAACTAGTG-----------------------GGCAGGGGGCAGGAAAA------GCGAGT---------------------------------GAAA--AGAACA-AAAGC--------CAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTAGAAC---TGTCGCCATGACAGCACAGAAT-------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................ATTTCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...AGCAGCGACGTCTACCCGGTGGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTCTCTTCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000001000
............................CATTTCTCTTCGGAGTGGTGCTGAC.............................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGCAGCGACGTCTACCCGGTGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................CATTTCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
............................................................................................................................................................................................................................................................................................GAAA--AGAACA-AAAGC--------CAACGC......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TCGGAGTGGTGCTGTAAGTAA........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCGAGT---------------------------------GAAA--AGAACA-AAAGC--------............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GAAAA------GCGAGT---------------------------------GAAA--AGAAC...........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................ACTGCA----TG-----CGACAT------------------------CGAA..............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GTGCTGTAAGTAACCTA---------AT.........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCTCTTCGGAGTGGTGCTGAC.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................A---------ATT-------------------------G-------GGATT-----CCGTGATG.....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................CTTCGGAGTGGTGCTGAC.............................................................................................................................................................................................................................................................................................................................................................................................1841.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GTGGGCCCATTTCTCTTCGGA........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GACGTCTACCCGGTGGGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TT-------------------------G-------GGATT-----CCGTGATGCTCCA................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......AGCGACGTCTACCCGGTGGGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ACTGCA----TG-----CGACAT------------------------CGAAAAA...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATTTCTCTTCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...AGCAGCGACGTCTACCCGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................AACCTA---------ATT-------------------------G-------GGATT-----CCGTGA.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTCTCTTCGGAGTGGTGCTGAC.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTAGCAGCGACGTCTACC...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TGATTAAATT-------------TTAGAAC---TGTCG............................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGCGACGTCTACCCGGTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TAACCTA---------ATT-------------------------G-------GGATT-----CCGTG........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TGTGTGG------GAATTGATTAAATT-------------...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................CTTCGGAGTGGTGCTGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....GCAGCGACGTCTACCCGGTGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AAGC--------CAACGCATCTGTGTGG------G.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......GCGACGTCTACCCGGTGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CATTTCTCTTCGGAGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CGGAGTGGTGCTGTAAGTAAC.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CTCCACTGCA----TG-----CGACAT------------------------CG................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGGGCCCATTTCTCTTCGGAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAGCAGCGACGTCTACCCGGTGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATTTCTCTTCGGAGTGGTGCTGAC.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCGACGTCTACCCGGTGGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCATTTCTCTTCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CTCTTCGGAGTGGTGCTGAC.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCGAGT---------------------------------GAAA--AGAACA-AAAGC--------CAA.........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................ATTAAATT-------------TTAGAAC---TGTCGC...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGTAGCAGCGACGTCTACCCGGTGGGCCCGTTTCTCTTCGGAGTGGTGCTGTAAGTAACCTA---------ATT-------------------------G-------GGATT-----CCGTGATGCTCCACTGCA----TA-----CGACAT------------------------CGAGGAA--------AACTAGTG-----------------------GGCAGGGGGCAGGAAAAGCGAAAGCGAGT---------------------------------TAAA--AACACA-AAAGC--------CAACGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACAGCACAGAAT-------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...AGCAGCGACGTCTACCCGGTGGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2614.00402000000000200000
...AGCAGCGACGTCTACCCGGTGGGCCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200100000000100000
............................CGTTTCTCTTCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
..............................................................................................................TT-----CCGTGATGCTCCACTGCA----T......................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................................A---------ATT-------------------------G-------GGATT-----CCGTGATGCTC..................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................GTTTCTCTTCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
droSec2
GGTAGCAGCGACGTCTACCCGGTGGGCCCATTTCTCTTCGGAGTGGTGCTGTAAGTAACCTA---------ATT-------------------------G-------GGATT-----CCGTGATGCTCCACTGCA----TA-----CGACAT------------------------CGAAGAA--------AACTAGTG-----------------------GGCAGGGGGCAGGAAAA------GCGAGT---------------------------------GAAA----AACA-AAAGC--------CAATGCATCTGTGTGG------GAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACAGCACAGAAT-------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...AGCAGCGACGTCTACCCGGTGGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................26110.00100730
...AGCAGCGACGTCTACCCGGTGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200
............................CATTTCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................TTTCTCTTCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
......AGCGACGTCTACCCGGTGGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.....CAGCGACGTCTACCCGGTGGG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.GTAGCAGCGACGTCTACCCGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...AGCAGCGACGTCTACCCGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.............................ATTTCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................ATTTCTCTTCGGAGTGGTGCTGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...AGCAGCGACGTCTACCCGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
droYak3
GGTAGCAGCGACGTCTACCCCGTGGGACCTTTCCTCTTCGGAGTGGTGCTGTAAGTAGCCCA---------ATTG--------------------------------GCTGT-----CCGAGATGCTTCACTGCA----T------------------------------------CGCAGAG--------AACTAGTGGGGGCAGAAAACTAGT-----------GGGGGCAGGAAAA------GAGAGC---------------------------------GGAA--AACACAAAAAGG--------CAGCGCATCTGTGTGGGAATGGGAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACCACAGAAT-------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...AGCAGCGACGTCTACCCCGTGGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................2522.00400010030000
.........................GACCTTTCCTCTTCGGAGT......................................................................................................................................................................................................................................................................................................................................................................................................1921.50301200000000
............................CTTTCCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2221.50300000030000
.............................TTTCCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2121.50310010010000
...AGCAGCGACGTCTACCCCGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2121.00201000010000
...AGCAGCGACGTCTACCCCGTGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2421.00200000020000
...AGCAGCGACGTCTACCCCGTGGG........................................................................................................................................................................................................................................................................................................................................................................................................................2321.00200000020000
......................................................................................................................................A----T------------------------------------CGCAGAG--------AACTAGTGGGGGCA.....................................................................................................................................................................................................................................2311.00100000010000
...AGCAGCGACGTCTACCCCGTGGGACCT....................................................................................................................................................................................................................................................................................................................................................................................................................2721.00200000020000
....GCAGCGACGTCTACCCCGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100010000000
....GCAGCGACGTCTACCCCGTGGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
.....................................................AGTAGCCCA---------ATTG--------------------------------GCTGT-----CCG..........................................................................................................................................................................................................................................................................................................................2120.50101000000000
............................CTTTCCTCTTCGGAGTGGTGC.................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
..................................TCTTCGGAGTGGTGCTGT..............................................................................................................................................................................................................................................................................................................................................................................................1820.50100100000000
..............................TTCCTCTTCGGAGTGGTGC.................................................................................................................................................................................................................................................................................................................................................................................................1920.50100100000000
......AGCGACGTCTACCCCGTGGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000010000
.....................GTGGGACCTTTCCTCTTCGGAGT......................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000010000
.........................GACCTTTCCTCTTCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................2920.50100100000000
............................CTTTCCTCTTCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................2620.50100000010000
......AGCGACGTCTACCCCGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
...........................CCTTTCCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000000000
...AGCAGCGACGTCTACCCCGTGGGACCTTTC.................................................................................................................................................................................................................................................................................................................................................................................................................3020.50100000010000
....GCAGCGACGTCTACCCCGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100100000000
...AGCAGCGACGTCTACCCCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2030.33100100000000
.................................CTCTTCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................2130.33100100000000
..................................TCTTCGGAGTGGTGCTGACC............................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
droEre2
GGCAGCAGCGACGTCTACCCGGTGGGACCTTTTCTCTTCGGAGTGGTGCTGTAAGTAGC------------------------------------------------------------------CTCCACTGCA----T------------------------------------CGCAGAA--------CACCAGTG-----------------------G----GGGGCAGGA-AA------GAGAGC---------------------------------GGAA--ACTACA-AAAGC--------CAGCGCATCTGTGTGG------CAATTGATTAAATT-------------TTTGAAC---TGTCGCCATGACACCACAGAAT-------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................GACCTTTTCTCTTCGGAGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000120
...AGCAGCGACGTCTACCCGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030001110
...AGCAGCGACGTCTACCCGGTGGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020100010
..............CTACCCGGTGGGACCTTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
....GCAGCGACGTCTACCCGGTGGGACCTT...................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
........................GGACCTTTTCTCTTCGGAGTGGTGCT................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
................................TCTCTTCGGAGTGGTGCTGACG............................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.......................GGGACCTTTTCTCTTCGGAGT......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...AGCAGCGACGTCTACCCGGTGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...AGCAGCGACGTCTACCCGGTGGG........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.......................................................................................................................................................................................................................................................................................................................AGCGCATCTGTGTGG------CAATTGA...............................................................................................2211.0010000100
.......GCGACGTCTACCCGGTGGGACCT....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
........................GGACCTTTTCTCTTCGGAGT......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
....GCAGCGACGTCTACCCGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...AGCAGCGACGTCTACCCGGTGGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.................................................................................................................................................................................................................................................................................................................................................GATTAAATT-------------TTTGAAC---TGT..............................................................1911.0010000010
.GCAGCAGCGACGTCTACCCGGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.......................................................................................................................................................................................................................................................................................................................................................ATT-------------TTTGAAC---TGTCGCCATGA......................................................2111.0010000010
........................GGACCTTTTCTCTTCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.........GACGTCTACCCGGTGGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.......GCGACGTCTACCCGGTGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.............................TTTTCTCTTCGGAGTGGTGCTGA..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
...................................................................................................................................................................................................AGTG-----------------------G----GGGGCAGGA-AA------GAGAGC---------------------------------......................................................................................................................................................2211.0010000010
...AGCAGCGACGTCTACCCGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000
........................GGACCTTTTCTCTTCGGAGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.........................GACCTTTTCTCTTCGGAGT......................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...............................TTCTCTTCGGAGTGGTGCTG...............................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000

Generated: 05/16/2015 at 09:01 PM