ID:

dvi_20596

 Coordinate:

scaffold_13049:19060169-19060340 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.4 -17.3 -16.7 -16.7

Flybase annnotation

exon [dvir_GLEANR_11534:18]; CDS [Dvir\GJ11500-cds]; CDS [Dvir\GJ11500-cds]; exon [dvir_GLEANR_11534:19]; intron [Dvir\GJ11500-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGCGAATTCGTTGTCGAACAGAGGAGTGTGCTGAGGCCGCATCCAGATGTGTAAGTAAAATCCCAACCTTTTAAAATCACCATAAACTATATATAAGAAACCATAGAGAAATCGGATTGAAACCTGGGTCTGGTCTTTGTGACTGTTTTCATATATTACACTCAAGAAGTATTGCTTAAAAATGAATAGAATAATTATTTGAGTCTGTTGCTCTCGTTTCAGATTAATTATGCTAAAAGTGTCTTCGATGAACGCGAGTTGTCCCTCATTAA
******************************************************************************************************((.(((....((((((.((.......((((..((((.(((.(((...........))).))).)))).................))))........)).))))))...)))..))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060676
9xArg_ovaries_total
 V116
male body		 SRR060677
Argx9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060658
140_ovaries_total
 SRR060679
140x9_testes_total
 SRR060660
Argentina_ovaries_total
 M027
male body		 SRR060659
Argentina_testes_total
 SRR060673
9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060656
9x160_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060678
9x140_testes_total
 GSM1528803
follicle cells		 SRR060654
160x9_ovaries_total
 SRR060670
9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060657
140_testes_total
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 SRR060655
9x160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR1106728
larvae
 SRR1106729
mixed whole adult body
 V053
head
.......TCGTTGTCGAACAGAGGAGTGTGC................................................................................................................................................................................................................................................. 24 0 1 10.00 10 0 2 0 1 0 0 0 0 0 0 3 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TTGTCGAACAGAGGAGTGTGC................................................................................................................................................................................................................................................. 21 0 1 6.00 6 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................ATGCTAAAAGTGTCTTCGATG...................... 21 0 1 4.00 4 1 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TAAAAGTGTCTTCGATGAACGCGAGTTG........... 28 0 1 4.00 4 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GAATTCGTTGTCGAACAGAGGAGTGT................................................................................................................................................................................................................................................... 26 0 1 3.00 3 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TAAAAGTGTCTTCGATGAACG.................. 21 0 1 3.00 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCT................................................................................................................................................................................................................................................ 21 0 1 3.00 3 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TAAAAGTGTCTTCGATGAACGCGAGT............. 26 0 1 3.00 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATTTGAGTCTGTTGCTCTCGT....................................................... 21 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTGTGCTGAGGCCGCATCCA................................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................AGAGAGATCGGATTGAAACCT................................................................................................................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................GGGGTGTCTTCGATGAACGCG................ 21 3 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATAGAGAAATCGGATTGAAAC..................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGAACGGAGGAGTGTGCTGAGG............................................................................................................................................................................................................................................ 22 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCTGAGGC........................................................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................AAAAGTGTCTTCGATGAACGC................. 21 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TAATTATGCTAAAAGTGTCTTCGATGAA.................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGTGCTGAGGCCGCATCCAGAT................................................................................................................................................................................................................................ 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGC................................................................................................................................................................................................................................................. 20 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TCTTCGATGAACGCGAGTTGTCCCT...... 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCTGGGTCTGGTCTTTGTGAC................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTATGATAAAAGTGTCTCCG......................... 20 2 2 1.50 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CTGAGGCCGCATCCAGATGTG............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................AATCGGATTGAAACCTGGGTC.............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCTGAGGCCT......................................................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TAAAAGTGTCTCCGATGAACG.................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........CGTTGTCGAACGGAGGAGTGT................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TAGAATAATTATTTGAGTCTGT................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................CGGATTGAAACCTGGGTCTGGTT......................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AGAGGTCGGATTGAAACCTGGG................................................................................................................................................ 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTTTGAGTCTGTTGCTCTCG........................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................GATGAACGCGAGTTGTCCCT...... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GGTGTCTTCGATGAACGCGAGT............. 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTAATTATGCTAAAGGTGTCT............................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............TCGAACAGAGGAGTGTGCTGAGGCCGCA....................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTCGTTGTCGAACAGAGGAGTGTGCTG............................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CGGAGGAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CGTTGTCGAACAGAGGAGTG.................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GAATAATTATTTGAGTCTGTT............................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ATTATGCTAAAAGTGTCTTCG......................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AAACCATAGAGAGATCGGATT.......................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................ATCGGATTGAAACCTGGGTCT............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AAGAAATCATAGAGAAATCGG............................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACAGAGGAGTGTGCTGGGGC........................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TCATATATTACACTCAAGAAGTATTGC................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGTTGCTCTCGTTTCAGATT............................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AATTCGTTGTCGAACAGAGGA....................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CGGAGGAGTGTGCTGAGGCCT......................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTCGTTGTCGAACAGAGGAGTT.................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CAGAGGAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCTGGGGCCGCATCCGGATGT.............................................................................................................................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TATTACACTCAAGAAGCATTGC................................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCTG............................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGAACAGAGGAGTGTGCTGAGGCCGCATC..................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................TGCTGAGGCCGCATCCAGATGTATTAAT........................................................................................................................................................................................................................ 28 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTGCACTCAAGAAGTATTGCT................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................ATGAACGCGAGTTGTCCCTCAC... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACAGAGGAGTGTGCTGAGGCCGCAT...................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCTT............................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CAGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................GATGTGTAAGTAAAGTCCCCA.............................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TAGAGAGATCGGATTGAAACC.................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTATGCTAAAAGTGTCTTCGA........................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TTCGATGAACGCGAGTTGTC......... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................ATATATAAGAAACCATAGAGA................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATATTACACTCAAGAAGTATT................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTGCACTCAAGAGGTATTGCT................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGACTGTTTTCATATATTACAC............................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTGTGCTGAGGCCGCATCCAG.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCTCGTTTCAGATTAATTATG........................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GAGGAGTGTGCTGGGGCCG......................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ACAGAGGAGTGTGCTGAGGCCGCATC..................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGTCTGGTCTTTGTGACTG............................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GATTAATTATGCTAAAAGTGT.............................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CGTTGTCGAACAGAGGAGTGTTT................................................................................................................................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTCGTTGTCGAACAGAGGAGT..................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CAGAGGAGTGTGCTGAGGCCGCAT...................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AATTATTTGAGTCTGTTGCT............................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGGATTGAAACCTGGGTCTGG........................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTGGAACAGAGGAGTGTGCTGAG............................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................AGTGTGCTGAGGCCGCATCC.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................ACAGAGGAGTGTGCTGGGGCCT......................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GTATTGCTTAAAAATGAATAG................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGAACAGAGGAGTGTGCTGAGG............................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ACAGAGGAGTGTGCTGAGG............................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTAAGTAAAATCCCAACCT........................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................GTGTCTTCGATGAACGCGAGT............. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TACACTCAAGAAGTATTGCTT............................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTCTGTTGCTCTCGTTTCAG.................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACAGAGGAGTGTGCTGAGT............................................................................................................................................................................................................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TATGCTGAAAGTGTCTTCGAT....................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GTCGAACAGAGGAGTGTGCTGAGG............................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GAGAAATCGGATTGAAACCTG.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................GTCTTCGATGAACGCGAGTT............ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................AGATGTGTAAGTAAAATCCC................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TAGAGAGATCGGATTGAGGCCT................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AATTATGCTAAGAGTGTCTTC.......................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TCGTTGTCGAACAGAGGAGTGTGCTGAA............................................................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTAATTATGCTAAAAGTGTCTTCGAT....................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TTAAAATCACCATAAACTAT...................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GTTGTCGAACAGAGGAGTGTGCTT............................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GTCGGATTGAAGCCTGGGTCTG............................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTCAGATTAATTATGCTAAA................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......TCGTTGTCGAACAGAGGAGT..................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TTGTCGAACGGAGGGGTGTGC................................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTCGTTGTCGAACAGAGGAGTGTGC................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGAGGAGTGTGCTGAGGCCGCA....................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................AGAGAAATCGGATTGAAGCCT................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGAAATCCCAACCTTT......................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................CGATGAACGCGAGTTGTC......... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TCGTTGTCGAACAGAGGAGTG.................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGAGGAGTGTGCTGAGGCCGC........................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAGGCCGCATCCAGATGTGT............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TTCGATGAACGCGAGTTGTCCCTGA.... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................AGGTGTCTTCGATGAACGCGA............... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGGAGTGTGCTGAGGCCGCA....................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGAGGAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ACAGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TCTTCGATGAACGCGAGTTGT.......... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CAGAGAAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACAGAGGAGTGTGCTGAGGCCGC........................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GATGTGTAGGTGGAATCCCA............................................................................................................................................................................................................... 20 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATGGAATGATTATTTGAGTCT.................................................................. 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGTCGGATTGAAACCTGGGTC.............................................................................................................................................. 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTGGTCATCGTGACTGTT............................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................................................GGGTGTCTTCGATGAGCGCGA............... 21 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................CGATGAACGCGTGTTAACC........ 19 3 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CGGGTCATTGTTACTGTTTT........................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCGCTTAAGCAACAGCTTGTCTCCTCACACGACTCCGGCGTAGGTCTACACATTCATTTTAGGGTTGGAAAATTTTAGTGGTATTTGATATATATTCTTTGGTATCTCTTTAGCCTAACTTTGGACCCAGACCAGAAACACTGACAAAAGTATATAATGTGAGTTCTTCATAACGAATTTTTACTTATCTTATTAATAAACTCAGACAACGAGAGCAAAGTCTAATTAATACGATTTTCACAGAAGCTACTTGCGCTCAACAGGGAGTAATT
*******************************************************((.(((....((((((.((.......((((..((((.(((.(((...........))).))).)))).................))))........)).))))))...)))..))****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060688
160_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060659
Argentina_testes_total
 M027
male body		 M028
head
 SRR060656
9x160_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060689
160x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
...................................CGGCGTAGGTCTACACATTCA........................................................................................................................................................................................................................ 21 0 1 5.00 5 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................CCGGCGTAGGTCTACACATTC......................................................................................................................................................................................................................... 21 0 1 3.00 3 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CGGCGTAGGTCTACACATTCG........................................................................................................................................................................................................................ 21 1 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GACTCCGGCGTAGGTCTACAC............................................................................................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TCCTCACACGACTCCGGCGTA...................................................................................................................................................................................................................................... 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GGTTGGAAAATTTTAGTGGTA............................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................TTAGGGTTGGAAAATTTTAGT................................................................................................................................................................................................. 21 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GTTGGAAAATTTTAGTGGTAT............................................................................................................................................................................................ 21 0 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GTTGGGAAATTTTAGTGGTAT............................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTGGAAAATTTTAGTGGTATT........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CCAGAAACACTGACAAAAGT......................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................CTACTTGCGCTCAACAGGGACT.... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GCTTGTCTCCTCACACGACT.............................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................ACGACTCCGGCGTAGGTCTAC............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGACCCAGACCAGAAACACT.................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TATCTCTTTAGCCTAACTTTG..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GTAGGTCTACACATTCATTTT.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTCGTTTTAGGGTTGGAAAAT....................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CAGGAACACTGGCAAAAGTAT....................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CACGACTCCGGCGTAGGTCT................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................TATAATGTGAGTTCTTCGTAA................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ACTTGCGCTCAACAGGGAGTGG.. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ACAACGAGAGCAAAGTCTAAT.............................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GGTTGGGAAATTTTAGTGGTGT............................................................................................................................................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GTTTTCACAGAAGCTATTTGC.................. 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................CTTGCGCTCGACAGGGAGTAA.. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TAGGGTTGGAAAATTTTAGTG................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TAGCCTAACTTTGGACCCAGG............................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CTACACATTCATTTTCCGGTT.............................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CTCCGGCGTAGGTCTACACAT........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GTAGGTCTACACATTCGTTTT.................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GTTGGAAGATTTTAGTGGTAT............................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............AGCTTGTCTCCTCACACGAC............................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TTGACTCCGGCGTAGGTCTACAC............................................................................................................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ACTTGCGGTGAACAGGGAG..... 19 2 3 1.00 3 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GTGAGTTCTTCGTAACGAAT.............................................................................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................AACACTGACGAAAGTATATAA................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................AGTATATAATGTGAGTTCTTC....................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................GGTCTACACATTCATTTTAGG................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CACATTCGTTTTAGGGTTGGG........................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CTACACATTCGTTTTAGGGTTG............................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CATTTTAGGGTTGGAAAATTT..................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ACTTGCGCTCAACAGGGACTAA.. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TTGATATATATTCTTTGGTAT....................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............AGCTTGTCTCCTCACACGACT.............................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCTTTAGCCTAACTTTGGGC.................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTCATTTTAGGGTTGGAAAGT....................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................ACAGAAGCTACTTGCGCTCGA............ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................GTATATAATGTGAGTTCTTCGT..................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CTCCGGCGTAGGTCTACACATT.......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TAGTGGTATTTGATATATATT................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AGGGTTGGAAAATTTTAGTG................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCAAAGTCTAATTAATACGGT..................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ATACGATTTTCACAGAAGCTA....................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CAACAGCTTGTCTCCTCAC.................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................TTGCGCTCAACAGGGACTAAT. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TCACGACTCCGGCGTAGG.................................................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTAGGGTTGGAAAATTTTAGTG................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GAAGCTACTTGCGCTCAACAG......... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGTTCTTCATAACGAATTTT........................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CGGCGTAGGTCTACACATTC......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................TTGCGCTCAACAGGGAGTAAT. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCAGACAACGAGAGCAAAGTC.................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTTTGGTATCTCTTTAGCCTA........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGAAAATTTTAGTGGTATTT.......................................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GCGTAGGTCTACACGTTCGTT...................................................................................................................................................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................TTAGGTTGGAAAATTTTAGT................................................................................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AACAGCTTCTTACCTCACAC.................................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................CCAGACCCGAAGCAGTGAC............................................................................................................................... 19 3 19 0.11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
..............................................................................................................................CCAGATCAGAAGCAGTGAC............................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................................CGACTTGCGGTGAACAGGG....... 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CCAGATCAGAAGCAGTGA................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AGAGCAAAGTCTCCTTATT.......................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:19060119-19060390 - dvi_20596 CGCGAATTCGTTGTCGA-------------ACAGAGGAGTGTGCTGAGGCCGCATCCAGATGTGTAAGTAAAATC-CCA---------------------------------------------AC--------------------------------CTTTTAAAATCACCATAAACTATATATAA-GAAACCA-TAGAGAAATCGG--------------------------------------------AT-----------------------------------------------------------------------TGAAACCTGGGTCTG-------------------------------------------------------G---TCTTTGTGAC--TGTTTTCA-TATATTACACTCAAG--AAGTATTGCTTAAAAATGAATAGA---ATAATTATTT---GAG-TCTGTTGCT--CTCGTTTCAGATTAATTATGCTAAAAGTGTCTTCGATGAACGCGAGT-TGTCCC-TCATTAA
droMoj3 scaffold_6680:12179743-12179927 + CACGAATTCGTTGTCGA-------------ACAGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAGAGTGCTTATAAGAAACAA-----------------------------------------------------------------------------------------------------------GACGATAATTGC-------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGCTTATATATCTATATT---ATAACG----A-----CTATG-T---CTTTCCTTACAGATTAATTATGCTAAAAGTGTCTTCGATGAACGCGAGC-TGTCTC-TATTGAA
droGri2 scaffold_15110:16745438-16745641 - CGCAAATTCGGTGTCGG-------------ACTGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAAACCG------------------------------------------------------------------------------------------------------------------------------------ATTTGTT---------------------------------------------------------------------------------------------------AA--CTATTTATTATGTTTTACTTGCT-------------------------------------------------------------------------GCATAACTTCA----------T--TAATATTG-----ATATATATATGAATATATATATC--------TCTG-T---TTTTCTCTGCAGATAAACTACGCTAAAAGTGTCTTCGATGAACGTGAGC-TGTCGT-TAATAAA
droWil2 scf2_1100000004540:899168-899323 - CGCGGATAAGATGTCGA-------------ACTGAGGAATGTGCTGAAGCTGCATCTAGATGTGTAAGTGTC-------------------------------------------------------------------------------------------------------------------------------GAAAAATAC-------------------------------------T-----------------------------------------------------------------------------------TTTC-----------------------------------------------------------------------------------------------------------AATTGCTAGAAATTCTT--TT---ATATCG----T-----TTTTC-T---ATACTCTTTCAGATAAACTACGCTAAAAGTGTATTCGATGAACGTGAACAC-------------
dp5 XR_group6:3550915-3550973 + CAAGGATACGATGTCGA-------------TCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_9:1848419-1848477 + CAAGGATACGATGTCGA-------------TCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:19825527-19825750 - CCAGGATACGGTGTCGC-------------TCTGAAGAGTGTGCGGAGGCGGCATCGAGATGTGTGAGTACAATT-TTATAAGA-----------AT----TTCATTTATAATCCGAAAC----------------------------------------------------------------------------------------------------------------ACG-----TA-----GTTGCAT-----------------------------------------------------------------------TGAAAC------------------------------------------------------------A---A---TTTATGT-------TTATAACTTTATT----TTTATACAAAC-TTG-----AAATGACTATC---ACATACATTTATTTTTATTTG-A--TT--TCTTTTTAGATAAATTACGCTAAAAGTGTCTATGATGAACGTGA-----------------
droBip1 scf7180000396360:1016766-1016989 - CCAGGATACGGTGTCGG-------------TCTGAGGAATGTGCCGAGGCGGCGTCGAGATGTGTAAGTTT------------------------------TTAGTTTATGGTCTGAAGGACTAGT--------------------------------TTCCTTAAAATATTTTAAACTAC--------AATCGA---------------------------------------------TA-----GTTGCAT-----------------------------------------------------------------------TGGAAC------------------------------------------------------------A-------------------------------GTTTATTTTTATA-AAAACTTG-----AAACGACTATC---ACATATATTT---AACTTTTG-T---T--TCTTTTTAGATAAATTACGCTAAGAGTGTCTATGATGAACGTGA-----------------
droKik1 scf7180000302808:57752-57835 - AAAAACGAATGAACCTAATTTATTTGGTAGTCTGTAACATACACTTAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATT-----AATTAATAAAC---ACTTATA------------------------------CAT--------------------------------------------AAAAAA
droFic1 scf7180000453839:254571-254629 - CGAGGATCCGATGTCGG-------------TCTGAGGAATGTGCCGAGGCTGCATCAAGATGCGTAAGTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491255:1148967-1149187 + CAAGGATACGCTGTCGA-------------TCTGAGGAATGTGCTGAGGCTGCATCGAGATGCGTAAGTGAATTA-TTA--GGA--------------------------------------------------------------------------------------------------------------------GAAAAC--------------------------------------------------------------------------------------------------------------------------------------------------GCC-------------------------------A--GCAACAGATAATTTAATTTT--GCATATAACTTTATTTACTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATATTTG-T---T--T-CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATAAA
droRho1 scf7180000779359:22086-22301 - CGAGGATACGGTGTCGA-------------TCTGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTGGATTC-T-ATAA---------------------------------------------------------------------------------------------------------------------AAAAATTGAATTGTTTATATTTAAATTTTAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGTTTT--GCATATAACTTTATTTACTTTTAT--AAATTTTG-----AAATGATTATC---ACATATATTC---CATATTTG-T---T--T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------
droBia1 scf7180000302529:863265-863442 - CGCGGATACGATGTCGA-------------TCTGAGGAAGTTGCGGAGGCCGCATCAAGATGCGTAAGTAAAACCTCCTTATGATACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA--TCGTATAACTTTATTTACT-TTAC--AAATTTTG-----AAATGATTATC---ACATATATTA---CATA--------------CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------
droTak1 scf7180000415409:177124-177423 + CCAGGATACGTTGTAAA-------------TCTGAGGAATGCGCTGAGAATGCGTCACGATGCGTAAGTAAACCA------T--------------------------------------------------------------------------------------------GAAAAATGTATAGTGGGGCCAAAGAAATCGCTTC-------------------------------------CCGCTGAATT-------TATATCAAATTTATATTCATGTCCCTAAGAACTCCGCACGAATTCAGCGTTAAGC-----------------------GCATTATAATTTATC-------------------------------A--TTT---A---TTTTAGTTTAGTTTAGTTAAGTTTCTTTACTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTT---CTTATTTG-T---T--T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------
droEug1 scf7180000409466:4856835-4857125 + CGAGGATACGTTGTCGA-------------TCAGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTAAAACC-TATC----------------------------------------------------------------------------------------------GAAAAAATTATA------------------------------------------------------------------ATTTAGCACATATATAATATTTATTTTATTG----------------------------TTAAGCCTTTAAATTGAGTTCTGCTTTTGGCATTTTAACTCAAA-------------------------------A--TTA---A---TTTTAGTTTA--GCATATAACTTTATTTAGTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTT---CATATTTG-T---T--T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATAAA
dm3 chr3L:12761403-12761662 + CCAGGATACGGTGTCGT-------------TCCGAGGAATGTGCTGAGGCAGCATCAAGATGCGTAAGTAGAAAT-CAT---------------------------------------------CTT----AGC----------------------------AGAAATTAGTAGAAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTCA-----ATAATAAACTATTATTGTTGAAGCGCA---G---ACTTTGTTTA--TCATATAA-TTTATTTACTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTTG-TCTT--TTTCTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATAAA
droSim2 3l:12463441-12463699 + dsi_29391 CCAGGATACGGTGTCGT-------------TCCGAGGAATGTGCTGAGGCAGCATCGAGATGCGTAAGTAGAAAT-CATTATGAAACATATGATTATTTCTATTGAT-----------------CTT----AGCTATACGATTTCGTAATGATTTTGAT-----------------------------------------------------------------------------------TTCTT-----------------------------------------TA--------------------------------------------------------TAAATTGTC-------------------------------A--GCA---G---ACTTCGTTTA--TCATATAA-TTTATTACCTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTT--------TTTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------
droSec2 scaffold_0:4946450-4946739 + CCAGGATACGGTGTCGT-------------TCCGAGGAATGTGCTGAGACAGCATCAAGATGCGTAAGTAGATAT-CATTATGAAACATATGATTATTTCTTTTGAT-----------------CTT----AGCTACACGATTTCGTAATGATTTTGAT-----------------------------------------------------------------------------------TGCTT-----------------------------------------CA--------------------------------------------------------TAAATTGTCTTTCAAAACAATAAT--ACTATTAATAATGAA--GCA---G---ACTTTGTTTA--TCATATAA-TTTATTACCTTTTAC--AAATTTGG-----AAATGATTATC---ACATATATTC---CATACTTG-T---T--TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------
droYak3 3L:12832529-12832803 + CGAGGATTCGGTGTCGT-------------TCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAAAT-CTTTAT-------TTAATAATTTCGTTTGAT-----------------CTATGTATGCTCTAAAATTTAAAA------------------------------------------------------------------------------------ATGTTGTT--TTCCC-----------------------------------------AATTAATCCG--------------------------------------------------------C---------TATAAT--AATATTAATATTAAA--GAA---G---ACTTCGTTTA--TCATATAA-TTTATTTACTTTTAT--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTTG-T---T--TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------
droEre2 scaffold_4784:12769003-12769267 + CGAGGATCCGGTGTCGT-------------TCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAACT-CATTATAAAACATATAATTACTTCTTCTGAT-----------------CTC----AGCTCTAAGATTTCG-----------AT-----------------------------------------------------------------------------------TGCTT-----------------------------------------AA------------------------------------------------------------TTCTTTTTCAAGA-AATAAT--TTTACT-----------------A---ATTTCGTTTA--TACGATAAATTTATTTATGTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTTG-T---TTTTTTTTTTAGATAAACTACGCTAAGAGTGTCTTTGATGAACGTGA-----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CGCGAATTCGTTGTCGA-------------ACAGAGGAGTGTGCTGAGGCCGCATCCAGATGTGTAAGTAAAATC-CCA---------------------------------------------AC--------------------------------CTTTTAAAATCACCATAAACTATATATAA-GAAACCA-TAGAGAAATCGG--------------------------------------------AT-----------------------------------------------------------------------TGAAACCTGGGTCTG-------------------------------------------------------G---TCTTTGTGAC--TGTTTTCA-TATATTACACTCAAG--AAGTATTGCTTAAAAATGAATAGA---ATAATTATTT---GAG-TCTGTTGCT--CTCGTTTCAGATTAATTATGCTAAAAGTGTCTTCGATGAACGCGAGT-TGTCCC-TCATTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......TCGTTGTCGA-------------ACAGAGGAGTGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0010000020200000000000000003002100000000000000000000000000000000000
..........TTGTCGA-------------ACAGAGGAGTGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.006001001000000000000000000010000000000000000000000000000001000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTAAAAGTGTCTTCGATG........................2114.004001000000100000000000000000010000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTCGATGAACGCGAGT-TG............2814.004000000000000000000000000021100000000000000000000000000000000000
...GAATTCGTTGTCGA-------------ACAGAGGAGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003000010000000000000000000011000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTCGATGAACG....................2113.003000000001000000000000001000000100000000000000000000000000000000
...........TGTCGA-------------ACAGAGGAGTGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000001000000000000000010000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTCGATGAACGCGAGT-..............2613.003001000000000000000000000000200000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT---GAG-TCTGTTGCT--CTCGT.........................................................2112.002000000000000000000000000001100000000000000000000000000000000000
......................................GTGTGCTGAGGCCGCATCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................A-TAGAGAAATCGG--------------------------------------------AT-----------------------------------------------------------------------TGAAAC...............................................................................................................................................................................................................................2112.002100000000000000000000000000001000000000000000000000000000000000
...........TGTCGA-------------ACAGAGGAGTGTGCTGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000002000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGTCTTCGATGAACGC...................2112.002000000000000000000000000010010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTATGCTAAAAGTGTCTTCGATGAA......................2812.002000000000000000000000000002000000000000000000000000000000000000
.......................................TGTGCTGAGGCCGCATCCAGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000002
...........TGTCGA-------------ACAGAGGAGTGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000001010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGATGAACGCGAGT-TGTCCC-T......2512.002000000000000000000000000000000000000002000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CCTGGGTCTG-------------------------------------------------------G---TCTTTGTGAC--...............................................................................................................................................2112.002200000000000000000000000000000000000000000000000000000000000000
...........................................CTGAGGCCGCATCCAGATGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................AATCGG--------------------------------------------AT-----------------------------------------------------------------------TGAAACCTGGGTC........................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...........TGTCGA-------------ACAGAGGAGTGTGCTGAGGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGA---ATAATTATTT---GAG-TCTGT....................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................CGG--------------------------------------------AT-----------------------------------------------------------------------TGAAACCTGGGTCTG-------------------------------------------------------G---TT.........................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACGCGAGT-TGTCCC-T......2011.001000000000000000000000000000001000000000000000000000000000000000
.............TCGA-------------ACAGAGGAGTGTGCTGAGGCCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
......TTCGTTGTCGA-------------ACAGAGGAGTGTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
........CGTTGTCGA-------------ACAGAGGAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---ATAATTATTT---GAG-TCTGTT...................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGCTAAAAGTGTCTTCG...........................2111.001000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................ATCGG--------------------------------------------AT-----------------------------------------------------------------------TGAAACCTGGGTCT.......................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-TATATTACACTCAAG--AAGTATTGC............................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
...........TGTCGA-------------ACAGAGGAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCT--CTCGTTTCAGATT.................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....AATTCGTTGTCGA-------------ACAGAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
......TTCGTTGTCGA-------------ACAGAGGAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...............................CAGAGGAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........TGTCGA-------------ACAGAGGAGTGTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
...........TGTCGA-------------ACAGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..............CGA-------------ACAGAGGAGTGTGCTGAGGCCGCATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACGCGAGT-TGTCCC-TCAC...2211.001001000000000000000000000000000000000000000000000000000000000000
................A-------------ACAGAGGAGTGTGCTGAGGCCGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000001000000000000000000000000000000000000000000000000000000
...........TGTCGA-------------ACAGAGGAGTGTGCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
...............................CAGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCTAAAAGTGTCTTCGA..........................2111.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATGAACGCGAGT-TGTC..........2011.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................ATATATAA-GAAACCA-TAGAGA................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTACACTCAAG--AAGTATT..............................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGAC--TGTTTTCA-TATATTACAC............................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
......................................GTGTGCTGAGGCCGCATCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--CTCGTTTCAGATTAATTATG..........................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................ACAGAGGAGTGTGCTGAGGCCGCATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
................................AGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GGTCTG-------------------------------------------------------G---TCTTTGTGAC--TG.............................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAATTATGCTAAAAGTGT................................2111.001000000000000000000000000000000000000000000000000000000000000010
........CGTTGTCGA-------------ACAGAGGAGTGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......TTCGTTGTCGA-------------ACAGAGGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................CAGAGGAGTGTGCTGAGGCCGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTATTT---GAG-TCTGTTGCT--..............................................................2011.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................TCGG--------------------------------------------AT-----------------------------------------------------------------------TGAAACCTGGGTCTG-------------------------------------------------------G---...........................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
.....................................AGTGTGCTGAGGCCGCATCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGCTTAAAAATGAATAG..............................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
...........TGTCGA-------------ACAGAGGAGTGTGCTGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000001000000000000000000000000000000000000000
..............................ACAGAGGAGTGTGCTGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000100000000000000000000000000000000
..............................................................TGTAAGTAAAATC-CCA---------------------------------------------AC--------------------------------CT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCGATGAACGCGAGT-..............2111.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTCAAG--AAGTATTGCTT..........................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TCTGTTGCT--CTCGTTTCAG....................................................2011.001000000000000000000000000000000010000000000000000000000000000000
................A-------------ACAGAGGAGTGTGCTGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
............GTCGA-------------ACAGAGGAGTGTGCTGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................GAGAAATCGG--------------------------------------------AT-----------------------------------------------------------------------TGAAACCTG............................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCGATGAACGCGAGT-T.............2011.001000000000001000000000000000000000000000000000000000000000000000
.........................................................AGATGTGTAAGTAAAATC-CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.......TCGTTGTCGA-------------ACAGAGGAGTGTGCTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTATGCTAAAAGTGTCTTCGAT.........................2611.001000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................TTAAAATCACCATAAACTAT.....................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........GTTGTCGA-------------ACAGAGGAGTGTGCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGATTAATTATGCTAAA.....................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......TCGTTGTCGA-------------ACAGAGGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
......TTCGTTGTCGA-------------ACAGAGGAGTGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
................................AGAGGAGTGTGCTGAGGCCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGAACGCGAGT-TGTC..........1811.001000000000000000000000000000010000000000000000000000000000000000
.......TCGTTGTCGA-------------ACAGAGGAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
................................AGAGGAGTGTGCTGAGGCCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
............................................TGAGGCCGCATCCAGATGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..................................AGGAGTGTGCTGAGGCCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
................................AGAGGAGTGTGCTGAGGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
..............................ACAGAGGAGTGTGCTGAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGATGAACGCGAGT-TGT...........2111.001000000000100000000000000000000000000000000000000000000000000000
................A-------------ACAGAGGAGTGTGCTGAGGCCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
CACGAATTCGTTGTCGA-------------ACAGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAGAGTGCTTATAAGAAACAA-----------------------------------------------------------------------------------------------------------GACGATAATTGC-------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGCTTATATATCTATATT---ATAACG----A-----CTATG-T---CTTTCCTTACAGATTAATTATGCTAAAAGTGTCTTCGATGAACGCGAGC-TGTCTC-TATTGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................GATGTGTAAGTAGAGTGCTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.005100004
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTAAAAGTGTCTTCGATGAACGCGA.................2811.001100000
.......................................................CTAGATGTGTAAGTAGAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAAGTGTCTTCGATGAACG....................2211.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTCTTCGATGAACGC...................2011.001100000
..............................ACAGAGGAATGTGCTGAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGAGC-TGTCTC-TATTGA.2111.001000001
...................................................................GTAGAGTGCTTATAAGAAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................TGTGTCTAGATGTGTAAGTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........TTGTCGA-------------ACAGAGGAATGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................AATGTGCTGAGGCTGTGTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTATGCTAAAAGTGTCTT.............................2111.001100000
.....................................AATGTGCTGAGGCTGTGTCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
droGri2
CGCAAATTCGGTGTCGG-------------ACTGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAAACCG------------------------------------------------------------------------------------------------------------------------------------ATTTGTT---------------------------------------------------------------------------------------------------AA--CTATTTATTATGTTTTACTTGCT-------------------------------------------------------------------------GCATAACTTCA----------T--TAATATTG-----ATATATATATGAATATATATATC--------TCTG-T---TTTTCTCTGCAGATAAACTACGCTAAAAGTGTCTTCGATGAACGTGAGC-TGTCGT-TAATAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CGCGGATAAGATGTCGA-------------ACTGAGGAATGTGCTGAAGCTGCATCTAGATGTGTAAGTGTC-------------------------------------------------------------------------------------------------------------------------------GAAAAATAC-------------------------------------T-----------------------------------------------------------------------------------TTTC-----------------------------------------------------------------------------------------------------------AATTGCTAGAAATTCTT--TT---ATATCG----T-----TTTTC-T---ATACTCTTTCAGATAAACTACGCTAAAAGTGTATTCGATGAACGTGAACAC-------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....GATAAGATGTCGA-------------ACTGAGGAATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
......TAAGATGTCGA-------------ACTGAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
dp5
CAAGGATACGATGTCGA-------------TCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................CGGAGGAATGTGCTGAAGCTGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........GATGTCGA-------------TCGGAGGAATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..AGGATACGATGTCGA-------------TCGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CAAGGATACGATGTCGA-------------TCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CCAGGATACGGTGTCGC-------------TCTGAAGAGTGTGCGGAGGCGGCATCGAGATGTGTGAGTACAATT-TTATAAGA-----------AT----TTCATTTATAATCCGAAAC----------------------------------------------------------------------------------------------------------------ACG-----TA-----GTTGCAT-----------------------------------------------------------------------TGAAAC------------------------------------------------------------A---A---TTTATGT-------TTATAACTTTATT----TTTATACAAAC-TTG-----AAATGACTATC---ACATACATTTATTTTTATTTG-A--TT--TCTTTTTAGATAAATTACGCTAAAAGTGTCTATGATGAACGTGA-----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CCAGGATACGGTGTCGG-------------TCTGAGGAATGTGCCGAGGCGGCGTCGAGATGTGTAAGTTT------------------------------TTAGTTTATGGTCTGAAGGACTAGT--------------------------------TTCCTTAAAATATTTTAAACTAC--------AATCGA---------------------------------------------TA-----GTTGCAT-----------------------------------------------------------------------TGGAAC------------------------------------------------------------A-------------------------------GTTTATTTTTATA-AAAACTTG-----AAACGACTATC---ACATATATTT---AACTTTTG-T---T--TCTTTTTAGATAAATTACGCTAAGAGTGTCTATGATGAACGTGA-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAAAACGAATGAACCTAATTTATTTGGTAGTCTGTAACATACACTTAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATT-----AATTAATAAAC---ACTTATA------------------------------CAT--------------------------------------------AAAAAASizeHit CountTotal NormTotal
No Reads
droFic1
CGAGGATCCGATGTCGG-------------TCTGAGGAATGTGCCGAGGCTGCATCAAGATGCGTAAGTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CAAGGATACGCTGTCGA-------------TCTGAGGAATGTGCTGAGGCTGCATCGAGATGCGTAAGTGAATTA-TTA--GGA--------------------------------------------------------------------------------------------------------------------GAAAAC--------------------------------------------------------------------------------------------------------------------------------------------------GCC-------------------------------A--GCAACAGATAATTTAATTTT--GCATATAACTTTATTTACTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATATTTG-T---T--T-CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATAAASizeHit CountTotal NormTotal
No Reads
droRho1
CGAGGATACGGTGTCGA-------------TCTGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTGGATTC-T-ATAA---------------------------------------------------------------------------------------------------------------------AAAAATTGAATTGTTTATATTTAAATTTTAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGTTTT--GCATATAACTTTATTTACTTTTAT--AAATTTTG-----AAATGATTATC---ACATATATTC---CATATTTG-T---T--T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------SizeHit CountTotal NormTotal
No Reads
droBia1
CGCGGATACGATGTCGA-------------TCTGAGGAAGTTGCGGAGGCCGCATCAAGATGCGTAAGTAAAACCTCCTTATGATACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA--TCGTATAACTTTATTTACT-TTAC--AAATTTTG-----AAATGATTATC---ACATATATTA---CATA--------------CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCAGGATACGTTGTAAA-------------TCTGAGGAATGCGCTGAGAATGCGTCACGATGCGTAAGTAAACCA------T--------------------------------------------------------------------------------------------GAAAAATGTATAGTGGGGCCAAAGAAATCGCTTC-------------------------------------CCGCTGAATT-------TATATCAAATTTATATTCATGTCCCTAAGAACTCCGCACGAATTCAGCGTTAAGC-----------------------GCATTATAATTTATC-------------------------------A--TTT---A---TTTTAGTTTAGTTTAGTTAAGTTTCTTTACTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTT---CTTATTTG-T---T--T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------SizeHit CountTotal NormTotal
No Reads
droEug1
CGAGGATACGTTGTCGA-------------TCAGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTAAAACC-TATC----------------------------------------------------------------------------------------------GAAAAAATTATA------------------------------------------------------------------ATTTAGCACATATATAATATTTATTTTATTG----------------------------TTAAGCCTTTAAATTGAGTTCTGCTTTTGGCATTTTAACTCAAA-------------------------------A--TTA---A---TTTTAGTTTA--GCATATAACTTTATTTAGTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTT---CATATTTG-T---T--T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATAAASizeHit CountTotal NormTotal
No Reads
dm3
CCAGGATACGGTGTCGT-------------TCCGAGGAATGTGCTGAGGCAGCATCAAGATGCGTAAGTAGAAAT-CAT---------------------------------------------CTT----AGC----------------------------AGAAATTAGTAGAAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTCA-----ATAATAAACTATTATTGTTGAAGCGCA---G---ACTTTGTTTA--TCATATAA-TTTATTTACTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTTG-TCTT--TTTCTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......TACGGTGTCGT-------------TCCGAGGAATGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25131.00310000000000000000000000000000000000000000100300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000000000000000000000000000000000100000000000000000000000000300000000000000000000000000000000000100000000000000000000000000000001000000100030000120110000100100001111001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACGTGAACATGCCGTT.......21115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000020000211000000100000101103000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGAACGTGAACATGCCG.........2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000200000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAACGTGAACATGCCGT........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000200000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCCGTT.......2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATGAACGTGAACATGC...........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000010000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCC..........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTTGATGAAC.....................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACGTGAACATGCCGT........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCTAAAAGTGTCTTTGATGAACG....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTTGATGAACGTGAACAT.............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGATGAACGTGAACATG............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000
............GTCGT-------------TCCGAGGAATGTGCTGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GAATGTGCTGAGGCAGCATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
......TACGGTGTCGT-------------TCCGAGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GATACGGTGTCGT-------------TCCGAGGAATGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACGTGAACATGCCGTTT......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTCTTTGATGAACG....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTTGAAGCGCA---G---ACTTTGTTT..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCGAGGAATGTGCTGAGGCAGCATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCTTTGATGAACGTGAACATGCC..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................T-------------TCCGAGGAATGTGCTGAGGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......TACGGTGTCGT-------------TCCGAGGAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGT-------------TCCGAGGAATGTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GTAAGTAGAAAT-CAT---------------------------------------------CTT----AGC----------------------------........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....ATACGGTGTCGT-------------TCCGAGGAATGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................CCGAGGAATGTGCTGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATGAACGTGAACATG............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCCGAGGAATGTGCTGAGGCAGCATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................T-------------TCCGAGGAATGTGCTGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGAACGTGAACATGCCGT........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAGTGTCTTTGATGAA......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................TGTGCTGAGGCAGCATCAAGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTTGATGAACG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTCTTTGATGAACGTG..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GATACGGTGTCGT-------------TCCGAGGAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........TGTCGT-------------TCCGAGGAATGTGCTGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................CTGAGGCAGCATCAAGATGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................A--TCATATAA-TTTATTTACTT...........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AATGTGCTGAGGCAGCATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAAGTGTCTTTGATGAAC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
......TACGGTGTCGT-------------TCCGAGGAATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......TACGGTGTCGT-------------TCCGAGGAATGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTAAAAGTGTCTTTGATG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGATGAACGTGAACATGCCGTT.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTACGCTAAAAGTGTC...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.........GGTGTCGT-------------TCCGAGGAATGTGCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTTGATGAACGTGAACATGCCG.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCCAA........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATG............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGATGAACGTGAACATGCCGTT.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGT-------------TCCGAGGAATGTGCTGAGGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGTGTCGT-------------TCCGAGGAATGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATACGGTGTCGT-------------TCCGAGGAATGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droSim2
CCAGGATACGGTGTCGT-------------TCCGAGGAATGTGCTGAGGCAGCATCGAGATGCGTAAGTAGAAAT-CATTATGAAACATATGATTATTTCTATTGAT-----------------CTT----AGCTATACGATTTCGTAATGATTTTGAT-----------------------------------------------------------------------------------TTCTT-----------------------------------------TA--------------------------------------------------------TAAATTGTC-------------------------------A--GCA---G---ACTTCGTTTA--TCATATAA-TTTATTACCTTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTT--------TTTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................A--GCA---G---ACTTCGTTTA--TCATAT.........................................................................................................................................2112.00200000200000000000
............................................TGAGGCAGCATCGAGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
......TACGGTGTCGT-------------TCCGAGGAATGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAC--AAATTTTG-----AA......................................................................................................15120.08100000000100000000
......................................................................................................................................................................................................................................................T-----------------------------------------TA--------------------------------------------------------TAAATTGTC-------------------------------A--GCT---...............................................................................................................................................................16200.05100000001000000000
................................................................................................................................................................................................................................................................................................TA--------------------------------------------------------TAAATTGTC-------------------------------A--GCT---...............................................................................................................................................................15200.05100000000100000000
droSec2
CCAGGATACGGTGTCGT-------------TCCGAGGAATGTGCTGAGACAGCATCAAGATGCGTAAGTAGATAT-CATTATGAAACATATGATTATTTCTTTTGAT-----------------CTT----AGCTACACGATTTCGTAATGATTTTGAT-----------------------------------------------------------------------------------TGCTT-----------------------------------------CA--------------------------------------------------------TAAATTGTCTTTCAAAACAATAAT--ACTATTAATAATGAA--GCA---G---ACTTTGTTTA--TCATATAA-TTTATTACCTTTTAC--AAATTTGG-----AAATGATTATC---ACATATATTC---CATACTTG-T---T--TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............GT-------------TCCGAGGAATGTGCTGAGACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
......TACGGTGTCGT-------------TCCGAGGAATGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
droYak3
CGAGGATTCGGTGTCGT-------------TCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAAAT-CTTTAT-------TTAATAATTTCGTTTGAT-----------------CTATGTATGCTCTAAAATTTAAAA------------------------------------------------------------------------------------ATGTTGTT--TTCCC-----------------------------------------AATTAATCCG--------------------------------------------------------C---------TATAAT--AATATTAATATTAAA--GAA---G---ACTTCGTTTA--TCATATAA-TTTATTTACTTTTAT--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTTG-T---T--TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGA-----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........TGTCGT-------------TCTGAGGAATGTGCCGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
droEre2
CGAGGATCCGGTGTCGT-------------TCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAACT-CATTATAAAACATATAATTACTTCTTCTGAT-----------------CTC----AGCTCTAAGATTTCG-----------AT-----------------------------------------------------------------------------------TGCTT-----------------------------------------AA------------------------------------------------------------TTCTTTTTCAAGA-AATAAT--TTTACT-----------------A---ATTTCGTTTA--TACGATAAATTTATTTATGTTTAC--AAATTTTG-----AAATGATTATC---ACATATATTC---CATACTTG-T---TTTTTTTTTTAGATAAACTACGCTAAGAGTGTCTTTGATGAACGTGA-----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............GT-------------TCTGAGGAATGTGCCGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010

Generated: 05/16/2015 at 08:06 PM