ID:

dvi_20571

 Coordinate:

scaffold_13049:19018967-19019259 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.1 -24.9 -24.9

Flybase annnotation

exon [dvir_GLEANR_11540:3]; CDS [Dvir\GJ11507-cds]; exon [dvir_GLEANR_11540:4]; CDS [Dvir\GJ11507-cds]; intron [Dvir\GJ11507-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTAGTGCGGACTTTAAAACTGAGCTCAGCCAGTCGGACATGTTTGATCCTGTAAGTAATCTAACACTGGTCAAGAATAGCCTGGATACCAAGGGCTAGTTCCACTGGCTTCAGCGACGAATGACGATCCGAACAACCTGTATAAATATGTCTAGAGTGGTTTTGGTATAAAGGGTCGGATTTCTATTGATTTCGTGAAATTGATCAAGACTACCAATACTATATAAATCGTCAGTCACGCAGCCAGTGGAGCCAATTGTCATCCAGAATGATCATGAAATGTATGCAACACATTGTAGGTCAAGTCTCTAATAAAATAATAACACATTGCTTTTCCTTTGCAGCGTCTACAAACGAAAGTTATTAAACTGGTGGACGTGTCCTATGGCGGTGA
************************************************************************************(((((((((((((((...)))))))).(((.((....((((......(((...))).......))))....)).))))))))))....(((((.(((((............))))))))))..........********************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 GSM1528803
follicle cells		 M061
embryo
 SRR060686
Argx9_0-2h_embryos_total
 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR060665
9_females_carcasses_total
 M027
male body		 SRR060654
160x9_ovaries_total
 SRR060655
9x160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060658
140_ovaries_total
 SRR060666
160_males_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 V047
embryo
 SRR1106729
mixed whole adult body
 SRR060689
160x9_testes_total
 SRR060662
9x160_0-2h_embryos_total
 M028
head
 SRR060679
140x9_testes_total
...................TGAGCTCAGCCAGTCGGA.................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 5.00 5 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................AAACTGGTGGACGTGTCCTATGGCG.... 25 0 1 3.00 3 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGAGCTCAGCCAGTCGGAC................................................................................................................................................................................................................................................................................................................................................................... 19 0 1 3.00 3 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACTGAGCTCAGCCAGTCGGACATGTTT............................................................................................................................................................................................................................................................................................................................................................. 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGAGCTCAGCCAGTCGGACATGT............................................................................................................................................................................................................................................................................................................................................................... 23 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................CTGGTGGACGTGTCCTATGGCGGT.. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CTGAGCTCAGCCAGTCGGA.................................................................................................................................................................................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................ACTGGTGGACGTGTCCTATGGCGGTGA 27 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................AAACGAAAGTTATTAAACTGGTGGAC................. 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GTGCGGACTTTAAAACTGAGCTCAGC............................................................................................................................................................................................................................................................................................................................................................................ 26 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................TATTAAACTGGTGGACGTGTC............ 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................ATACCAAGGGCTAGTTCCACT................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TAAGCTCAGCCAGTCGGACATGT............................................................................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................GAAAGTTATTAAACTGGTGGAC................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GTGCGGACTTTAAAACTGAGC................................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGACGTGC............. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGAGCTCAGCCAGTCGGACATGTT.............................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGACGTGTCCTATAGC..... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................ACTGGTGGACGTGTCCTATGGC..... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................CGAAAGTTATTAAACTGGTGGAC................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................AAGTGATTAAACTGGTGG................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGTGCGGACTTTAAAACTGAGC................................................................................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................AAACTGGTGGACGTGTCCTA......... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GAGCTCAGCCAGTCGGAC................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TACAAACGAAAGTTATTAAACTGGTGGAC................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTCTACAAACGAAAGTGATTAAACTGGT..................... 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................GAAAGTGATTAAACTGGTGGACGT............... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................GTTATTAAACTGGTGGACGTGT............. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TAAAACTGAGCTCAGCCAGTCGGACATG................................................................................................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCTCAGCCAGTCGGACATGTT.............................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGACGTGTC............ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTATGGCGGTG. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AGCCAGTCGGACATGTTTGATCCT....................................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTGAAATTGATCAAGACTACCA.................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GTAGTGCGGACTTTAAAACTGAGCT................................................................................................................................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TATAAATATGTCTAGAGAGGTTTTGGTC.................................................................................................................................................................................................................................. 28 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................CTGGTGGACGTGTCCTATG....... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AGCCAGTCGGACATGTTTGATCCTC...................................................................................................................................................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................TATTAAACTGGTGGACGTGTCCTATG....... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTATG....... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GTGCGGACTTTAAAACTGAGCT................................................................................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................CTACAAACGAAAGTGATT............................. 18 1 2 1.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................CGAAAGTTATTAAACTGGT..................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TCAGCCAGTCGGACATGTTTGATCCTCG..................................................................................................................................................................................................................................................................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................TGGTGGACGTGTCCTATG....... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................AACACATTGCTTTTCCTTTGCAG.................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................TATTAAACTGGTGGACGTGT............. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TAGTGCGGACTTTAAAAC...................................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................GAAAGTGATTAAACTGGTGGAC................. 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTAT........ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGAGCTCAGCCAGTAGGA.................................................................................................................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................GAAAGTTATTAAACTGGTGGACGTGTC............ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTATGGCGG... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................GAAAGTGATTAAACTGGT..................... 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CTATTGATTTCGTGAAATTGATCAA.......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................TGAGCTCAGCCAGTCGGACATG................................................................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ATCAAGACTACTGATACT............................................................................................................................................................................. 18 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............TTAAAACTGAGCTCGGCC........................................................................................................................................................................................................................................................................................................................................................................... 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAATATGTGTAGGGCGGTTT....................................................................................................................................................................................................................................... 20 3 13 0.46 6 0 0 0 0 2 0 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................CTTGTAGACGTGTCGTATGGC..... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................ATTGGAGGGCAAGTCTCCAA.................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AAAATGTCTAGAGCGGTT........................................................................................................................................................................................................................................ 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................CAATTGTAGGTCAAGTCT...................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................GATTTCGTGGACTTGATGAA.......................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................................................................................ACACATTGGAGCGCAAGTCT...................................................................................... 20 3 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GGTTTCGGTAGAAAGGGTA......................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CGCGATATTGATCAAGAC....................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CATCACGCCTGAAATTTTGACTCGAGTCGGTCAGCCTGTACAAACTAGGACATTCATTAGATTGTGACCAGTTCTTATCGGACCTATGGTTCCCGATCAAGGTGACCGAAGTCGCTGCTTACTGCTAGGCTTGTTGGACATATTTATACAGATCTCACCAAAACCATATTTCCCAGCCTAAAGATAACTAAAGCACTTTAACTAGTTCTGATGGTTATGATATATTTAGCAGTCAGTGCGTCGGTCACCTCGGTTAACAGTAGGTCTTACTAGTACTTTACATACGTTGTGTAACATCCAGTTCAGAGATTATTTTATTATTGTGTAACGAAAAGGAAACGTCGCAGATGTTTGCTTTCAATAATTTGACCACCTGCACAGGATACCGCCACT
**********************************************************************************************************************************************************************************(((((((((((((((...)))))))).(((.((....((((......(((...))).......))))....)).))))))))))....(((((.(((((............))))))))))..........************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 M047
female body
 SRR060687
9_0-2h_embryos_total
 V116
male body		 V053
head
 SRR060664
9_males_carcasses_total
 SRR060681
Argx9_testes_total
 SRR060667
160_females_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060678
9x140_testes_total
 GSM1528803
follicle cells		 M028
head
 SRR1106730
embryo_16-30h
..................................................................................CCTAAGGTTGCCGATCAA..................................................................................................................................................................................................................................................................................................... 18 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................TTGACTCGAGTCGGTCAGCCT.................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......GCCTGAAATTTTGACTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...CACGCGTGAAATTTTGCCTC.................................................................................................................................................................................................................................................................................................................................................................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......CCGGAAACTTTGCCTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................. 20 3 4 0.50 2 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................TCCTAAGGTTGCCGATCAA..................................................................................................................................................................................................................................................................................................... 19 3 13 0.38 5 5 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AGCAGTCAGTGCGCCG...................................................................................................................................................... 16 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................TACCATTAGGTCTGACTAG........................................................................................................................ 19 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........GAAATTTTTACTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................. 17 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTTCTGAGGGTTATGATATG......................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................TCAAGGTGACAGAAG.......................................................................................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.......CGTGAAAGTTTGACTAGAGT.............................................................................................................................................................................................................................................................................................................................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................GACCGAAGTAGCTGGGTACT.............................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................TCGGTCTTACTAGTCCTTA.................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................CTGCACAGGATTCAGC.... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................CTTTCTGGTGGGCTTGTTG................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:19018917-19019309 - dvi_20571 GTAGTGCGGACTTTAAAACTGAGCTCAGCCAGTCGGACATGTTTGATCCTGTAAGTAATCT---AACACTGGTCAAGAATAGCCTGGAT--ACCAAGGGCTAGTTCCACTGGCTTCAGCGACGAATGACGATCCGAACAACCTGTATA-AATATGTCTAGAGTGGTTTTGGTATAAAGGGTCGGATTTCTATTGATTTCGTGAAATTGATCAAGACTACCAA--TACTATATAAATCGTCAGTCACGCAGCCAGTGGAGC-CAATTGTCATCCAGAATGATCAT--GAAATGTATGCAACACATTGTAGGTCAAGTCTCT-----AATAAAATAATAACACATT-----GCTTTTCCTTTGCAGCGTCTACAAACGAAAGTTATTAAACTGGTGGACGTGTCCTATGGCGGTGA
droMoj3 scaffold_6680:12214961-12215305 + GTAGTGCGGACTTCAAAACTGAGCTCAGCCAATCGGACATGTTTGATCCTGTAAGTAATCC---AACACTGCTCAAGCATAGCT-AGAT--CCCAAGGGCTACTTCCACTGGCCTCACCGA----------CCGAC--ACACAGT-TA-AATGCGTCTAGCAAAGTTTACGTAA----G-CTCAATCGCTATAGCTCTC---------------------------------AAATCGTCAGTCATGCAGCCAGTGGAGCCCAATTGTTATCCTGAATGATCAACAGAAACGTATGCAATACTATACAGTATATGTTTTT-----CATGTA-AACTAATATATT-----TTTCTACAATTACAGCGTTTACAATCAAAAGTGATTAAGCTGGTGGACGTGTCCTATGGTGGCGA
droGri2 scaffold_15110:16708827-16709188 - GTAGTGCGGACTTCAAAACTGAGCTCAGTCAATCGGATATGTTTGATCCCGTAAGTAATCCCAAAACACTGCTCACGAATACCCTGC-TAAGGCAAAGGCTAGTTCCACTGGCTC-------GAAATACGACCCAA--AGACAAT-TCGCGTATGTCTTGTATAATTTTCGCAT------------TTAT--------------------C----CTACAAAATTAC--TATAAATCGTCAGTCAAACAGCCAGTGGAGC-AATATATCATACTGAATGATCCTAAAAAATGTATGCAACTCTTTGTGGAACAAATCAAACAGACAAAAAAAAACTAACACACAAAT--CTTTGGCAATTGCAGCGTTTACAAACAAAAGTGATTAAACTGGTGGACGTCTCTTATGGCGGTGA
droWil2 scf2_1100000004511:3022322-3022401 - ATATTTACGC--------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------TGTCTTTCCTCTTAATAGCGTTTACAATCAAAAGTGATTAAACTGGTGGATGTGTCATATGGTGGGGA
dp5 XR_group6:2178589-2178644 + GTAGCGCGGACTTCAAGACCGAGCTCAGCCAGTCCGATATGTTTGATCCCGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_9:470878-470933 + GTAGCGCGGACTTCAAGACCGAGCTCAGCCAGTCCGATATGTTTGATCCCGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:10709219-10709304 + TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATAATAATAATA------TTTTTGTTAACTTTTTAGCGTTTGCAATCGAAAGTAATCAAGTTAGTGGATGTGTCTTATGGTGGCGA
droBip1 scf7180000396569:666644-666724 - AAT---CAAATTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGTTTGGTTTTCAGCGATTGCAATCGAAAGTAATCAAGCTTGTGGATGTGTCTTATGGTGGCGA
droKik1 scf7180000302441:3065663-3065723 + GTAGTGCGGACTTCAAGACGGAGCTCAGCCAGTCGGATATGTTTGATCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCT
droFic1 scf7180000454113:1982215-1982282 - ATAGCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTCCAGCGTTTGCAATCAAAAGTCATCAAGCTGGTGGACGTGTCCTATGGCGGCGA
droEle1 scf7180000491193:4664362-4664422 + TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGCGTTTGCAATCAAAAGTAATCAAACTGGTGGACGTGTCTTATGGCGGCGA
droRho1 scf7180000777002:76378-76440 + TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTGTAGCGTTTGCAAACAAAAGTAATCAAGCTGGTGGATGTGTCTTATGGCGGCGA
droBia1 scf7180000302193:5715918-5715983 - TGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTTTCAGCGTTTGCAAACAAAAGTTATCAAGCTGGTGGATGTGTCTTATGGCGGCGA
droTak1 scf7180000415703:462848-462935 - GTCTCAAGAAAGTCTTGACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACTTCCCTTCACAGCGTTTGCAATCAAAAATTATCAAGCTGGTGGACGTGTCTTATGGCGGTGA
droEug1 scf7180000409711:5638404-5638466 - ATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCAGCGTTTGCAATCTAAAGTCATCAAGCTGGTGGATGTGTCTTACGGTGGGGA
dm3 chr3L:20344079-20344134 + GTAGTGCGGATTTCAAGACTGAGCTTAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:19912594-19912649 + GTAGTGCGGACTTCAAGACTGAGCTCAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_11:237812-237867 + GTAGTGCGGACTTCAAGACTGAGCTCAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:20224201-20224256 - GTAGTGCGGACTTCAAGACTGAACTTAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:20043741-20043796 + GTAGTGCGGACTTCAAGACTGAGCTCAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTAGTGCGGACTTTAAAACTGAGCTCAGCCAGTCGGACATGTTTGATCCTGTAAGTAATCT---AACACTGGTCAAGAATAGCCTGGAT--ACCAAGGGCTAGTTCCACTGGCTTCAGCGACGAATGACGATCCGAACAACCTGTATA-AATATGTCTAGAGTGGTTTTGGTATAAAGGGTCGGATTTCTATTGATTTCGTGAAATTGATCAAGACTACCAA--TACTATATAAATCGTCAGTCACGCAGCCAGTGGAGC-CAATTGTCATCCAGAATGATCAT--GAAATGTATGCAACACATTGTAGGTCAAGTCTCT-----AATAAAATAATAACACATT-----GCTTTTCCTTTGCAGCGTCTACAAACGAAAGTTATTAAACTGGTGGACGTGTCCTATGGCGGTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................TGAGCTCAGCCAGTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................1815.005002000000000000001000000000000000001010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAACTGGTGGACGTGTCCTATGGCG....2513.003000000000000000001000000000000000000000000000000000000000000002
...................TGAGCTCAGCCAGTCGGAC........................................................................................................................................................................................................................................................................................................................................................................................1913.003002000000000001000000000000000000000000000000000000000000000000
................AACTGAGCTCAGCCAGTCGGACATGTTT..................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000002
...................TGAGCTCAGCCAGTCGGACATGT....................................................................................................................................................................................................................................................................................................................................................................................2312.002001000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGACGTGTCCTATGGCGGT..2412.002000000000000000000000000000000000000000000000000000000000000002
..................CTGAGCTCAGCCAGTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................1912.002000001000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGGACGTGTCCTATGGCGGTGA2712.002001000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................AAACGAAAGTTATTAAACTGGTGGAC.................2612.002001100000000000000000000000000000000000000000000000000000000000
...GTGCGGACTTTAAAACTGAGCTCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2612.002000100000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATTAAACTGGTGGACGTGTC............2112.002000000000001000010000000000000000000000000000000000000000000000
.......................................................................................AT--ACCAAGGGCTAGTTCCACT................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GAAAGTTATTAAACTGGTGGAC.................2211.001001000000000000000000000000000000000000000000000000000000000000
...GTGCGGACTTTAAAACTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGACGTGC.............1911.001000100000000000000000000000000000000000000000000000000000000000
...................TGAGCTCAGCCAGTCGGACATGTT...................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGGACGTGTCCTATGGC.....2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CGAAAGTTATTAAACTGGTGGAC.................2311.001001000000000000000000000000000000000000000000000000000000000000
..AGTGCGGACTTTAAAACTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................AAACTGGTGGACGTGTCCTA.........2011.001000000010000000000000000000000000000000000000000000000000000000
....................GAGCTCAGCCAGTCGGAC........................................................................................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TACAAACGAAAGTTATTAAACTGGTGGAC.................2911.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GTTATTAAACTGGTGGACGTGT.............2211.001000000000000010000000000000000000000000000000000000000000000000
.............TAAAACTGAGCTCAGCCAGTCGGACATG.....................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
......................GCTCAGCCAGTCGGACATGTT...................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGACGTGTC............2011.001000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTATGGCGGTG.2711.001001000000000000000000000000000000000000000000000000000000000000
..........................AGCCAGTCGGACATGTTTGATCCT............................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GTGAAATTGATCAAGACTACCA.................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
GTAGTGCGGACTTTAAAACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGACGTGTCCTATG.......1911.001000000000000000000000000000000000000100000000000000000000000000
..........................AGCCAGTCGGACATGTTTGATCCTC...........................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATTAAACTGGTGGACGTGTCCTATG.......2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTATG.......2111.001000000010000000000000000000000000000000000000000000000000000000
...GTGCGGACTTTAAAACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CGAAAGTTATTAAACTGGT.....................1911.001000000000000000001000000000000000000000000000000000000000000000
........................TCAGCCAGTCGGACATGTTTGATCCTCG..........................................................................................................................................................................................................................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGACGTGTCCTATG.......1811.001000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AACACATT-----GCTTTTCCTTTGCAG..................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATTAAACTGGTGGACGTGT.............2011.001000000000000010000000000000000000000000000000000000000000000000
.TAGTGCGGACTTTAAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTAT........2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GAAAGTTATTAAACTGGTGGACGTGTC............2711.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTGTCCTATGGCGG...2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTATTGATTTCGTGAAATTGATCAA.........................................................................................................................................................................................................2511.001000000000000000000000000000000000100000000000000000000000000000
...................TGAGCTCAGCCAGTCGGACATG.....................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
GTAGTGCGGACTTCAAAACTGAGCTCAGCCAATCGGACATGTTTGATCCTGTAAGTAATCC---AACACTGCTCAAGCATAGCT-AGAT--CCCAAGGGCTACTTCCACTGGCCTCACCGA----------CCGAC--ACACAGT-TA-AATGCGTCTAGCAAAGTTTACGTAA----G-CTCAATCGCTATAGCTCTC---------------------------------AAATCGTCAGTCATGCAGCCAGTGGAGCCCAATTGTTATCCTGAATGATCAACAGAAACGTATGCAATACTATACAGTATATGTTTTT-----CATGTA-AACTAATATATT-----TTTCTACAATTACAGCGTTTACAATCAAAAGTGATTAAGCTGGTGGACGTGTCCTATGGTGGCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGATTAAGCTGGTGGAC.................2314.004300001
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAGCTGGTGGACGTGTC............2113.003000003
.................ACTGAGCTCAGCCAATCGGAC........................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
..................CTGAGCTCAGCCAATCGGA.........................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAGCTGGTGGACGTGT.............2012.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAGCTGGTGGACGT...............1812.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................TTAAGCTGGTGGACGTGTC............1912.002000002
.................ACTGAGCTCAGCCAATCGGACATGT....................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..............AAAACTGAGCTCAGCCAATCGGA.........................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............CAAAACTGAGCTCAGCCAATCGGA.........................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.............................................................................................................................................................................................................................................................................................................................................................................GTTTACAATCAAAAGTGAT..............................1911.001100000
..AGTGCGGACTTCAAAACTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGTGGACGTGTCCT..........1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGATTAAGCTGGTGGACGTGT.............2711.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGTGGACGTGTCCTATGGT.....2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGATTAAGCTGGT.....................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGTGGACGTGTCC...........1811.001000100
.....................................................................................................................................GAC--ACACAGT-TA-AATGCGTC.................................................................................................................................................................................................................................................................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................GTGATTAAGCTGGTGGACGTGTC............2311.001000001
.........................CAGCCAATCGGACATGTTTGATCCT............................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...........................GCCAATCGGACATGTTTGATC..............................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................TGAGCTCAGCCAATCGGACA.......................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAGCTGGTGGACGTGTCCTA.........2411.001000001
................AACTGAGCTCAGCCAATCGGAC........................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........CTTCAAAACTGAGCTCAGCCAATCGGA.........................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...GTGCGGACTTCAAAACTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................AAGTGATTAAGCTGGTGGACGTGTCC...........2611.001100000
.......................CTCAGCCAATCGGACATGT....................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGATTAAGCTGGTGGACGTG..............2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................TTAAGCTGGTGGACGTGTCC...........2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................................TAAGCTGGTGGACGTGTC............1811.001000001
GTAGTGCGGACTTCAAAACT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGATTAAGCTGGTGGACGTGT.............2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGATTAAGCTGGTGGACG................2311.001100000
..........................AGCCAATCGGACATGTTTGATCCTCGT.........................................................................................................................................................................................................................................................................................................................................................................2711.001000001
......................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGATTAAGCTGGTGGACG................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAGCTGGTGGACGTGTCCT..........2311.001100000
........................................................................................................TCCACTGGCCTCACCGA----------CCGA.......................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCTGGTGGACGTGTCCT..........2211.001000001
droGri2
GTAGTGCGGACTTCAAAACTGAGCTCAGTCAATCGGATATGTTTGATCCCGTAAGTAATCCCAAAACACTGCTCACGAATACCCTGC-TAAGGCAAAGGCTAGTTCCACTGGCTC-------GAAATACGACCCAA--AGACAAT-TCGCGTATGTCTTGTATAATTTTCGCAT------------TTAT--------------------C----CTACAAAATTAC--TATAAATCGTCAGTCAAACAGCCAGTGGAGC-AATATATCATACTGAATGATCCTAAAAAATGTATGCAACTCTTTGTGGAACAAATCAAACAGACAAAAAAAAACTAACACACAAAT--CTTTGGCAATTGCAGCGTTTACAAACAAAAGTGATTAAACTGGTGGACGTCTCTTATGGCGGTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................GTCAATCGGATATGTTTGATCCCCGT.........................................................................................................................................................................................................................................................................................................................................................................2611.00110
.....................................................................................................................................................................................................................................................................................................................................................................................ACAAAAGTGATTAAACTGGTGGACGTC..............2711.00101
...GTGCGGACTTCAAAACTGAGCTCAGT.................................................................................................................................................................................................................................................................................................................................................................................................2611.00101
.........................................................................................................................................................................................................................................................................................................................................................................................AAGTGATTAAACTGGTGGAC.................2011.00110
....................GAGCTCAGTCAATCGGATA.......................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.....................AGCTCAGTCAATCGGATATG.....................................................................................................................................................................................................................................................................................................................................................................................2011.00101
..................................................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGACGTCTCTTATGGC.....2311.00101
......................................................................................................................................................................................................................................................................................................................................................................................................GGTGGACGTCTCTTATGGCGGT..2211.00110
............................................................................................................................................................................................................................................................................................................................................................................................TGATTAAACTGGTGGACGTC..............2011.00101
...............AAACTGAGCTCAGTCAATCGGATATG.....................................................................................................................................................................................................................................................................................................................................................................................2611.00101
droWil2
ATATTTACGC--------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------TGTCTTTCCTCTTAATAGCGTTTACAATCAAAAGTGATTAAACTGGTGGATGTGTCATATGGTGGGGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGATTAAACTGGTGGATGTGT.............2712.00200110
...............................................................................................................................................................................................................................................................................................................................................................................................TTAAACTGGTGGATGTGTC............1912.00200200
..........................................................................................................................................................................................................................................................................................................................................................................................AGTGATTAAACTGGTGGATGTGT.............2311.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGATGTGTCAT..........2211.00100010
......................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGATTAAACTGGTGGA..................2211.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAACTGGTGGATGTGT.............2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGATTAAACTGGTGGATGTGTCAT..........2911.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGATGTGT.............1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGATGTGTCATAT........2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGTGTCATATGGTGGG..2111.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGGATGTGTCATATGGTG....2311.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAACTGGTGGATGTGTCAT..........2311.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGTGTCATATGGTGGGGA2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................AACTGGTGGATGTGTCATATGGTGGG..2611.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................TTAAACTGGTGGATGTGT.............1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................GATTAAACTGGTGGATGT...............1811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................AAGTGATTAAACTGGTGGATGTGT.............2411.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................ATTAAACTGGTGGATGTG..............1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGGATGTGTCATATGGTGGG..2511.00100010
dp5
GTAGCGCGGACTTCAAGACCGAGCTCAGCCAGTCCGATATGTTTGATCCCGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................GTCCGATATGTTTGATCCCC...........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......GGACTTCAAGACCGAGCTCAGCCA...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......CGGACTTCAAGACCGAGCTCAGCCA...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........ACTTCAAGACCGAGCTCAGCCAGTC............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
..........CTTCAAGACCGAGCTCAGCC................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.........................CAGCCAGTCCGATATGTTTGATCCCC...........................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
................GACCGAGCTCAGCCAGTCCG..........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................CAGCCAGTCCGATATGTTTGAT...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
..........CTTCAAGACCGAGCTCAGCCA...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
...................CGAGCTCAGCCAGTCCGATATGT....................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........ACTTCAAGACCGAGCTCAGCCAGTCC...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
GTAGCGCGGACTTCAAGACCGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........CTTCAAGACCGAGCTCAGCCAGTCC...........................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
GTAGCGCGGACTTCAAGACCGAGCTCAGCCAGTCCGATATGTTTGATCCCGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........CTTCAAGACCGAGCTCAGCC................................................................................................................................................................................................................................................................................................................................................................................................2016.006600000
.......................CTCAGCCAGTCCGATATGTTTGATCC.............................................................................................................................................................................................................................................................................................................................................................................2612.002200000
........GACTTCAAGACCGAGCTCAGCCA...............................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
...........TTCAAGACCGAGCTCAGCC................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
........GACTTCAAGACCGAGCTCAGCCG...............................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................AGCCAGTCCGATATGTTTGATCCC............................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................CAGCCAGTCCGATATGTTTGATC..............................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........CTTCAAGACCGAGCTCAGCCA...............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................AGCCAGTCCGATATGTTT..................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................CTCAGCCAGTCCGATATGTTTGATCCC............................................................................................................................................................................................................................................................................................................................................................................2711.001010000
GTAGCGCGGACTTCAAGACCGA........................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droAna3
TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATAATAATAATA------TTTTTGTTAACTTTTTAGCGTTTGCAATCGAAAGTAATCAAGTTAGTGGATGTGTCTTATGGTGGCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGGATGTGTCTTATGGT.....2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................AAGTTAGTGGATGTGTCTTATGGT.....2411.001000001
................................................................................................................................................................................................................................................................................................................................................AATA------TTTTTGTTAACTTTTT....................................................2011.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................ATCAAGTTAGTGGATGTGTCT...........2111.001000010
droBip1
AAT---CAAATTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTGTTTGGTTTTCAGCGATTGCAATCGAAAGTAATCAAGCTTGTGGATGTGTCTTATGGTGGCGASizeHit CountTotal NormTotal
No Reads
droKik1
GTAGTGCGGACTTCAAGACGGAGCTCAGCCAGTCGGATATGTTTGATCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCTSizeHit CountTotal NormTotal
No Reads
droFic1
ATAGCGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTCCAGCGTTTGCAATCAAAAGTCATCAAGCTGGTGGACGTGTCCTATGGCGGCGASizeHit CountTotal NormTotal
No Reads
droEle1
TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGCGTTTGCAATCAAAAGTAATCAAACTGGTGGACGTGTCTTATGGCGGCGASizeHit CountTotal NormTotal
No Reads
droRho1
TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTGTAGCGTTTGCAAACAAAAGTAATCAAGCTGGTGGATGTGTCTTATGGCGGCGASizeHit CountTotal NormTotal
No Reads
droBia1
TGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTTTCAGCGTTTGCAAACAAAAGTTATCAAGCTGGTGGATGTGTCTTATGGCGGCGASizeHit CountTotal NormTotal
No Reads
droTak1
GTCTCAAGAAAGTCTTGACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACTTCCCTTCACAGCGTTTGCAATCAAAAATTATCAAGCTGGTGGACGTGTCTTATGGCGGTGASizeHit CountTotal NormTotal
No Reads
droEug1
ATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCAGCGTTTGCAATCTAAAGTCATCAAGCTGGTGGATGTGTCTTACGGTGGGGASizeHit CountTotal NormTotal
No Reads
dm3
GTAGTGCGGATTTCAAGACTGAGCTTAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.TAGTGCGGATTTCAAGACTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................2317.0070100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGTGCGGATTTCAAGACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000
GTAGTGCGGATTTCAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.TAGTGCGGATTTCAAGACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAGTGCGGATTTCAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............AAGACTGAGCTTAGTCAGT.............................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAGTGCGGATTTCAAGACTGAGCTTAG..................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....TGCGGATTTCAAGACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGAGCTTAGTCAGTCTGATATGT....................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000
.........ATTTCAAGACTGAGCTTAG..................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
GTAGTGCGGATTTCAAGACTGA........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAGTCTGATATGTTCGATCCTC...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGTGCGGATTTCAAGACTGAGCTT....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GATTTCAAGACTGAGCTTAGTC................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................GCTTAGTCAGTCTGATATGTTCGAT...............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAGCTTAGTCAGTCTGATATGTT...................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAGCTTAGTCAGTCTGA.........................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGAGCTTAGTCAGTCTGA.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAGTCAGTCTGATATGTTCGATCCTC...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACTGAGCTTAGTCAGTCTGATAT......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAGTCAGTCTGATATGTTCGATCCTCG..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAGTGCGGATTTCAAGACTGAGCTTA...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGAGCTTAGTCAGTCTGAT........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...GTGCGGATTTCAAGACTGAGCTT....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGAGCTTAGTCAGTCTGATATGTTCGA................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGTCAGTCTGATATGTTCGATCCTCG..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTGCGGATTTCAAGACTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..AGTGCGGATTTCAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGAGCTTAGTCAGTCTGATATGTT...................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................TTAGTCAGTCTGATATGTTCGATCCT............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGAGCTTAGTCAGTCTGATATGTT...................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAGTGCGGATTTCAAGACTT.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........GATTTCAAGACTGAGCTTAGTCAGT.............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................TCAGTCTGATATGTTCGATCCTCGT.........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTCAAGACTGAGCTTAGT.................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.TAGTGCGGATTTCAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAGTGCGGATTTCAAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................TAGTCAGTCTGATATGTTCGATC..............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCTTAGTCAGTCTGATATGTT...................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAGTGCGGATTTCAAGA............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAGCTTAGTCAGTCTGATATGTTC..................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAGTGCGGATTTCAAGACTGAGCTTAGT.................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTTCAAGACTGAGCTTAGTCA...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGCGGATTTCAAGACTGAGCTTAG..................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGTGCGGATTTCAAGACTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
droSim2
GTAGTGCGGACTTCAAGACTGAGCTCAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..AGTGCGGACTTCAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................1812.00201100000000000000
...GTGCGGACTTCAAGACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
...GTGCGGACTTCAAGACTGAGCTCAGT.................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
....TGCGGACTTCAAGACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.....GCGGACTTCAAGACTGAGCTCAGTCA...............................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..AGTGCGGACTTCAAGACTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
................GACTGAGCTCAGTCAGTCTGATATGTTCGATC..............................................................................................................................................................................................................................................................................................................................................................................3211.00100000010000000000
...............................GTCTGATATGTTCGATCCTCGG.........................................................................................................................................................................................................................................................................................................................................................................2220.50101000000000000000
droSec2
GTAGTGCGGACTTCAAGACTGAGCTCAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..AGTGCGGACTTCAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
...........TTCAAGACTGAGCTCAGTCAGT.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...GTGCGGACTTCAAGACTGAGCTCAGTCA...............................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
..AGTGCGGACTTCAAGACTGA........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
GTAGTGCGGACTTCAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........CTTCAAGACTGAGCTCAGTCA...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
droYak3
GTAGTGCGGACTTCAAGACTGAACTTAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................ACTTAGTCAGTCTGATATGTTCGATCCT............................................................................................................................................................................................................................................................................................................................................................................2812.00220000000000
......................ACTTAGTCAGTCTGATATGTTC..................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.................................CTGATATGTTCGATCCTCGT.........................................................................................................................................................................................................................................................................................................................................................................2070.14101000000000
droEre2
GTAGTGCGGACTTCAAGACTGAGCTCAGTCAGTCTGATATGTTCGATCCTGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
GTAGTGCGGACTTCAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..................CTGAGCTCAGTCAGTCTGAT........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010

Generated: 05/21/2015 at 04:05 PM