ID:

dvi_20490

 Coordinate:

scaffold_13049:18524026-18524176 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.5 -39.4 -39.4

Flybase annnotation

CDS [Dvir\GJ13758-cds]; exon [dvir_GLEANR_13624:1]; intron [Dvir\GJ13758-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGTATCTGTGGAGACAATTGGTTCAATTTTCATCAAAGCCCTAAAACTGGTAAGTGCCAAGAAATGTTTGCATGTAAAACAAAAGTCCTGCGGTTTTGGCTTACAAATTTTCGAACGTTTCGCCTGAAAATTGTTGAGCAATGCGACGACTAACTGGTTGGCCTTATCGGCCTTATCAGTGGTTGGGTGTACTTGTTAGTAATATTACTCATATATACGAAAAGCACAAGATCAAAAGTGCGGGTCGTGA
**************************************************.(((((((...((((((((((..(((((..(((((.........)))))..)))))......))))))))))........(((((...)))))((..((((((.(((((.((((.....))))..))))))))))).))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
.............GACAATTGGTTCAATTTTCATCAAA..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................ACAAGATCAAAAGTGCGGGT..... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................AATTTTCATCAAAGCCCTAA.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TGTTGAGCAATGCGACGACTAACTGGT............................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................AAGTTTTCGAACGTTTCGCCT............................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......TGTGGAGACAATTGGTTCAAT............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................ACTAACTGGTTGGCCTTATCGTTT.............................................................................. 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....ATCTGTGGAGACAATTGGTTCAAT............................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................TTTCATCAAAGCCCTAAAACTGAT....................................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......CTGTGGAGACAATTGGTTCA................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.GGTATCTGTGGAGACAATTGGTTCA................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...................TGGTTCAATTTTCATCAAAGCC.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....ATCCGTGGAGACAATTGGTT................................................................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................AAAATGGTAAGAACCAAGAAAT......................................................................................................................................................................................... 22 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................GGTCCTATCTGTGGTTGGGT.............................................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACCATAGACACCTCTGTTAACCAAGTTAAAAGTAGTTTCGGGATTTTGACCATTCACGGTTCTTTACAAACGTACATTTTGTTTTCAGGACGCCAAAACCGAATGTTTAAAAGCTTGCAAAGCGGACTTTTAACAACTCGTTACGCTGCTGATTGACCAACCGGAATAGCCGGAATAGTCACCAACCCACATGAACAATCATTATAATGAGTATATATGCTTTTCGTGTTCTAGTTTTCACGCCCAGCACT
**************************************************.(((((((...((((((((((..(((((..(((((.........)))))..)))))......))))))))))........(((((...)))))((..((((((.(((((.((((.....))))..))))))))))).))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060668
160x9_males_carcasses_total
 M027
male body		 SRR060681
Argx9_testes_total
 SRR060666
160_males_carcasses_total
 M028
head
 SRR060672
9x160_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060679
140x9_testes_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
........................................................................................................................................TTCGTTACGCTGCTGATTGACCA............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CTGATTGACCAACCGGAATAGCCGG.............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AAGTAGTTTCGGGATTTTG........................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGCTGATTGACCAACCGGAAT.................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CGTTACGCTGCTGATTGACCA............................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGGAACAGCCGGAACAGTCAC..................................................................... 21 3 7 0.57 4 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0
...................................................................................................................................................................GAACAGCCGGAACAGTCAC..................................................................... 19 2 6 0.33 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
....TTGAAACCTCTGTTAACCTA................................................................................................................................................................................................................................... 20 3 14 0.29 4 0 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0
......GAAACCTCTGTTAACCTA................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GAATCGCCGGAAAAGTCA...................................................................... 18 2 9 0.22 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TTGCCGGAATAGTTACCAAG................................................................. 20 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTTCGTGTGCAAGTTTTC............ 19 2 19 0.11 2 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................CGATGCTGCTTGAACAACC......................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................GAACAGCCGGAACAGTCA...................................................................... 18 2 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....TGAAACCTCTGTTAACCTA................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................TGGAATCGCCGGAAAAGTC....................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................CACATGAACAATCATAAA.............................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:18523976-18524226 + dvi_20490 TGGTATCTGTGGAGACAATTGGTTCAATTTTCATCAAAGCCCTAAAACTGGTAAGT--GCCAAGAAATGTTTGCATGTAAAACAAAA-------------------------------------------------------------------------------------------------------------------------GTCCTG-CGGTTTTGGCTTACAAATTTTCGAAC-GTTTCGCCT-GAAAATTGTTGAGCAATGCGACGACTAACTG--GTTGG-----CCTTATCGG----CC--TTATCAGTG-----------------------------------------GTTGGGTGT----------ACTTGTTAGT--AATATTACTCATATATACGAAAAGCACAAGATCAAAAGTGCGGGTCGT----GA
droMoj3 scaffold_6680:19323959-19324213 + TGGTATCTGTGGAAACAATTGGTTCGATTTTCATCAAAGCACTTAAGCTGGTAAGC--CTTG-------------------------------AGTTCAA-----TATTTA-------------------ATAGAAAC----------------------------------------------------------------T---AAGTCCTGGCCGCTCAG--TGACGAATTTTTGCCCAGCTTGGCTTGGAAAAATGTTGAGCAATGCG---ACTAACT-CTGCTGG-----CCTTATCGG----CC--TTATCTGTGCCTGCCTGGGGTGGGT---------------------------------T----------ACTTGTTCGT--AATATTACTCATGTATACGAAAAGCACAAAATTAAAA--GCGGGTCGT----GA
droGri2 scaffold_15110:9128677-9128959 - TGGTATCTGTGGAAACAATTGGTTCGATTTTCATCAAAGGTCTTAAGCTGGTATGT--C--AAA-CA--TTTG--TGCAAAAAGAA------------CGTATCTTTTTTCCTGGAAAAAATATGAAGAAAAAGAAAC---------------------------------------------AGTTTTCCTTC------------------------TTCAG--AGATGA----TTGCTCAAC---GCAAAAAAAAATGTTGAGCAATACG---AGTAACTGCTGTTGG-----CCTTATCAGTGT---GGTTATCAGTG-----------------------------------------T--GGTTATA---------ATAGATTAGT--AATATTACTCATGTGTGCGAAAAGCACAAAAAACCAAGTGCGGGTCGCGACTGA
droWil2 scf2_1100000004511:3171262-3171556 - TGGTATCAGTCGAGACAATCGGATCAATTTTTATCAAGGCCTTGAAACTGGTAAAT--ATTTCAAAATGAAAATGTGTAAACTAGAAATTCTTAGCTCAA-----ACTATA-------------------ATATCAGCTATTGGGTTTATGGATGGAAACAATCCTAGTGTTAAAGGATACACACATTCCCGTT------------------------CT--------------------C-GATT--CCTGTGTACATGTTGGGCAATATAATACCT----------------------------------------------ACATAGTTTGGGGTACATACTAGTGTGTTGTGTACGTGT--GGTGATAAGACTCCACTTTTATCAGCAAAAAATTACTCATACCT------------------------TGTAC-------AT
dp5 XR_group6:2051970-2052025 + TGGTGTCGGTGGAGACTATTGGTTCTATTTTCATCAAAGCCCTGAAGCTGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_9:345010-345065 + TGGTGTCGGTGGAGACTATTGGTTCTATTTTCATCAAAGCCCTGAAGCTGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:6300254-6300437 + TGGTGTCTGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGGAATA------------------------------------TCAGTACATTTTTTT-----------------------------------------------------------------------------------GTGAAAATT---GAGCAATAGCCA-------------------------------------------TTGGTAGTCGC---AACAAC-----TTGG-----GCTGATAAGCGG-CCGTTTATCAGTC-----------------------------------------CCCGGG-------------GCGTATTAGC--AATATTACTCATACGC------------------------CGCGTTGT----GC
droBip1 scf7180000396709:54710-54764 + TGGTGTCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302441:2921318-2921372 + TGGTATCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454113:2121573-2121628 - TGGTTTCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTTAAGTTGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491193:4499404-4499459 + TGGTGTCCGTGGAGACAATCGGTTCTATATTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778001:4255-4310 + TGGTGTCCGTGGAGACCGTCGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302193:2963566-2963746 + TGGTGTCCGTGGAGACAGTTGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTGAGT--TT------------------------------------TCGGTATATTAATTG-----------------------------------------------------------------------------------CTCCACC--ATTGGGCAAT-GCC--------------------------------------------TGGGTAGTCGC---AACAAC-----TTGGCTGAGGCTGATAAGCGC-GCGTTTATCAGCC-----------------------------------------CGC----------------GCGTATTAGC--AATGTTACTCATACGC------------------------CGCGTT------GA
droTak1 scf7180000415868:143788-143966 + TGGTATCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTGAGT--TTTT-------------------------------TTTTCGGT-----TTT--------------------------------------------------------------------------------TATTTGTCGAAATT---GCTCAATAGCC--------------------------------------------TGGGTAGTCGC---AATAAC-----TTGG------CTGATAAGCGCGCCTTTTATCAGTC-----------------------------------------CTC----------------GCGTATTACC--AATGTTACTCATACGC------------------------CGCGTTGT------
droEug1 scf7180000409711:5768682-5768737 - TGGTATCCGTGGAGACAGTTGGTTCTATATTCATCAAGGCTCTCAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:20181813-20181868 + TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:19771616-19771671 + TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_11:92475-92530 + TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGGCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr3L_random_040:40932-40987 + TGGTATCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:19911060-19911115 + TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGGTATCTGTGGAGACAATTGGTTCAATTTTCATCAAAGCCCTAAAACTGGTAAGT--GCCAAGAAATGTTTGCATGTAAAACAAAA-------------------------------------------------------------------------------------------------------------------------GTCCTG-CGGTTTTGGCTTACAAATTTTCGAAC-GTTTCGCCT-GAAAATTGTTGAGCAATGCGACGACTAACTG--GTTGG-----CCTTATCGG----CC--TTATCAGTG-----------------------------------------GTTGGGTGT----------ACTTGTTAGT--AATATTACTCATATATACGAAAAGCACAAGATCAAAAGTGCGGGTCGT----GASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............GACAATTGGTTCAATTTTCATCAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGATCAAAAGTGCGGGT.........2011.001001000000000000000000000000000000000000000000000000000000000000
.........................AATTTTCATCAAAGCCCTAA..................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TGTTGAGCAATGCGACGACTAACTG--GT................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
.......TGTGGAGACAATTGGTTCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACTAACTG--GTTGG-----CCTTATCGT----TT--.......................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
....ATCTGTGGAGACAATTGGTTCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......CTGTGGAGACAATTGGTTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.GGTATCTGTGGAGACAATTGGTTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
...................TGGTTCAATTTTCATCAAAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
TGGTATCTGTGGAAACAATTGGTTCGATTTTCATCAAAGCACTTAAGCTGGTAAGC--CTTG-------------------------------AGTTCAA-----TATTTA-------------------ATAGAAAC----------------------------------------------------------------T---AAGTCCTGGCCGCTCAG--TGACGAATTTTTGCCCAGCTTGGCTTGGAAAAATGTTGAGCAATGCG---ACTAACT-CTGCTGG-----CCTTATCGG----CC--TTATCTGTGCCTGCCTGGGGTGGGT---------------------------------T----------ACTTGTTCGT--AATATTACTCATGTATACGAAAAGCACAAAATTAAAA--GCGGGTCGT----GASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............AAACAATTGGTTCGATTTTCATCAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
....ATCTGTGGAAACAATTGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....ATCTGTGGAAACAATTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
TGGTATCTGTGGAAACAATTGGTTCGATTTTCATCAAAGGTCTTAAGCTGGTATGT--C--AAA-CA--TTTG--TGCAAAAAGAA------------CGTATCTTTTTTCCTGGAAAAAATATGAAGAAAAAGAAAC---------------------------------------------AGTTTTCCTTC------------------------TTCAG--AGATGA----TTGCTCAAC---GCAAAAAAAAATGTTGAGCAATACG---AGTAACTGCTGTTGG-----CCTTATCAGTGT---GGTTATCAGTG-----------------------------------------T--GGTTATA---------ATAGATTAGT--AATATTACTCATGTGTGCGAAAAGCACAAAAAACCAAGTGCGGGTCGCGACTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................AAAC---------------------------------------------AGTTTTCCTTC------------------------TTCAG--A.............................................................................................................................................................................................................................2111.00110
droWil2
TGGTATCAGTCGAGACAATCGGATCAATTTTTATCAAGGCCTTGAAACTGGTAAAT--ATTTCAAAATGAAAATGTGTAAACTAGAAATTCTTAGCTCAA-----ACTATA-------------------ATATCAGCTATTGGGTTTATGGATGGAAACAATCCTAGTGTTAAAGGATACACACATTCCCGTT------------------------CT--------------------C-GATT--CCTGTGTACATGTTGGGCAATATAATACCT----------------------------------------------ACATAGTTTGGGGTACATACTAGTGTGTTGTGTACGTGT--GGTGATAAGACTCCACTTTTATCAGCAAAAAATTACTCATACCT------------------------TGTAC-------ATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................ATCAAGGCCTTGAAACTG.............................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
....ATCAGTCGAGACAATCGGATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00210100
............................TTTTATCAAGGCCTTGAAACTG.............................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000
...TATCAGTCGAGACAATCGGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.........................AATTTTTATCAAGGCCTTG...................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
................AATCGGATCAATTTTTATCAAGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.GGTATCAGTCGAGACAATCGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.............GACAATCGGATCAATTTTTATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
..................................................................................................................................................................................................................................................GATT--CCTGTGTACATGTTGGG......................................................................................................................................................................................2111.00101000
....ATCAGTCGAGACAATCGGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.......................TCAATTTTTATCAAGGCCTTGAAACTG.............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...............................TATCAAGGCCTTGAAACTG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
....ATCAGTCGAGACAATCGGATCAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...............CAATCGGATCAATTTTTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..........................ATTTTTATCAAGGCCTTGAAACT..............................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...................................................................................................................................................................................................................................................................................................................................................................GTACGTGT--GGTGATAAGACTCCACTTTT..............................................................2811.00100100
..................................................................................................................................................................................................................................................................................................................................................................TGTACGTGT--GGTGATAAGACT......................................................................2111.00101000
......................................................................................................................................CAGCTATTGGGTTTATGGATG....................................................................................................................................................................................................................................................................................................2111.00101000
....ATCAGTCGAGACAATCGGATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........................CAATTTTTATCAAGGCCTTGAAACTGGT...........................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
dp5
TGGTGTCGGTGGAGACTATTGGTTCTATTTTCATCAAAGCCCTGAAGCTGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....GTCGGTGGAGACTATTGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040400000000
....GTCGGTGGAGACTATTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................CTATTTTCATCAAAGCCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................TCTATTTTCATCAAAGCCCTGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
........GTGGAGACTATTGGTTCTATTTTCATC............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...............CTATTGGTTCTATTTTCATC............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
......CGGTGGAGACTATTGGTTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................ATTTTCATCAAAGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......CGGTGGAGACTATTGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
....GTCGGTGGAGACTATTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................TTCATCAAAGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......CGGTGGAGACTATTGGTTCTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.GGTGTCGGTGGAGACTATTGGTTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
..........................ATTTTCATCAAAGCCCTGAA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................CTATTTTCATCAAAGCCCTGAAGCTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
.............GACTATTGGTTCTATTTTCATC............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.GGTGTCGGTGGAGACTATTGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
TGGTGTCGGTGGAGACTATTGGTTCTATTTTCATCAAAGCCCTGAAGCTGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................CATCAAAGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................1814.004400000
....GTCGGTGGAGACTATTGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
......CGGTGGAGACTATTGGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........GTGGAGACTATTGGTTCTATTTTCATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
droAna3
TGGTGTCTGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGGAATA------------------------------------TCAGTACATTTTTTT-----------------------------------------------------------------------------------GTGAAAATT---GAGCAATAGCCA-------------------------------------------TTGGTAGTCGC---AACAAC-----TTGG-----GCTGATAAGCGG-CCGTTTATCAGTC-----------------------------------------CCCGGG-------------GCGTATTAGC--AATATTACTCATACGC------------------------CGCGTTGT----GCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................TTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2112.002110000
................................ATCAAGGCCCTGAAGCTGA............................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................ATTTTCATCAAGGCCCTGAA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......CTGTGGAGACAGTTGGTTCTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........................ATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
............................TTTCATCAAGGCCCTGAAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
......CTGTGGAGACAGTTGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
TGGTGTCTGTGGAGACAGTTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
........................CTATTTTCATCAAGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
TGGTGTCTGTGGAGACAGTTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
................................ATCAAGGCCCTGAAGCTGGTAAGGA......................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............GACAGTTGGTTCTATTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........GTGGAGACAGTTGGTTCTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
TGGTGTCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGGTATCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGGTTTCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTTAAGTTGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGGTGTCCGTGGAGACAATCGGTTCTATATTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGGTGTCCGTGGAGACCGTCGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGGTGTCCGTGGAGACAGTTGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTGAGT--TT------------------------------------TCGGTATATTAATTG-----------------------------------------------------------------------------------CTCCACC--ATTGGGCAAT-GCC--------------------------------------------TGGGTAGTCGC---AACAAC-----TTGGCTGAGGCTGATAAGCGC-GCGTTTATCAGCC-----------------------------------------CGC----------------GCGTATTAGC--AATGTTACTCATACGC------------------------CGCGTT------GASizeHit CountTotal NormTotal
No Reads
droTak1
TGGTATCCGTGGAGACAGTTGGTTCTATTTTCATCAAGGCCCTGAAGCTGGTGAGT--TTTT-------------------------------TTTTCGGT-----TTT--------------------------------------------------------------------------------TATTTGTCGAAATT---GCTCAATAGCC--------------------------------------------TGGGTAGTCGC---AATAAC-----TTGG------CTGATAAGCGCGCCTTTTATCAGTC-----------------------------------------CTC----------------GCGTATTACC--AATGTTACTCATACGC------------------------CGCGTTGT------SizeHit CountTotal NormTotal
No Reads
droEug1
TGGTATCCGTGGAGACAGTTGGTTCTATATTCATCAAGGCTCTCAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............GACTGTAGGCTCTATTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000100000000000000000000101000000
.............GACTGTAGGCTCTATTTT................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGTGTCCGTGGAGACTGTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000
............AGACTGTAGGCTCTATTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACTGTAGGCTCTATTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................CTATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GGCTCTATTTTCATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGTGTCCGTGGAGACTGTAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGTCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....TCCGTGGAGACTGTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....GTCCGTGGAGACTGTAGGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................CTCTATTTTCATCAAGGCCCTGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCATCAAGGCCCTGAAGCTGG............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTGTAGGCTCTATTTTCATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....GTCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTATTTTCATCAAGGCCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTCCGTGGAGACTGTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCGTGGAGACTGTAGGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......CGTGGAGACTGTAGGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGTGGAGACTGTAGGCTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................TTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCGTGGAGACTGTAGGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................ATCAAGGCCCTGAAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATTTTCATCAAGGCCCTGAAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GGCTCTATTTTCATCAAGGCCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGTGTCCGTGGAGACTGTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......CCGTGGAGACTGTAGGCATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....GTCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................20110.001004600000000000000
....GTCCGTGGAGACTGTAGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
.GGTGTCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00202000000000000000
.................GTAGGCTCTATTTTCATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
....GTCCGTGGAGACTGTAGGCTCTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...TGTCCGTGGAGACTGTAGGCTCTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.....TCCGTGGAGACTGTAGGCTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
......CCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
.......................TCTATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..GTGTCCGTGGAGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................15120.08100000000001000000
droSec2
TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGGCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................ATTTTCATCAAGGGCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2316.0062220
....GTCCGTGGAGACTGTAGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021100
..GTGTCCGTGGAGACTGTAGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...TGTCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.............GACTGTAGGCTCTATTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.............................TTCATCAAGGGCCTGAAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...........................TTTTCATCAAGGGCCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
......CCGTGGAGACTGTAGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............GACTGTAGGCTCTATTTTCATCAAGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
..........................ATTTTCATCAAGGGCCTGAAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
droYak3
TGGTATCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....ATCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2024.00811300030000
..GTATCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2221.50300100020000
.............................TTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2021.00200200000000
............................TTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2121.00201000010000
....ATCCGTGGAGACTGTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00200000020000
....ATCCGTGGAGACTGTAGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2221.00200100010000
....ATCCGTGGAGACTGTAGGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100100000000
.....................GCTCTATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2820.50101000000000
.GGTATCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110000000000
.....................GCTCTATTTTCATCAAGGCCCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
.GGTATCCGTGGAGACTGTAGGCTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50101000000000
......CCGTGGAGACTGTAGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
........................CTATTTTCATCAAGGCCCTGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................2420.50100100000000
........................CTATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000010000
............................TTTCATCAAGGCCCTGAAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000000000
.......CGTGGAGACTGTAGGCTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000010000
............................TTTCATCAAGGCCCTGAAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................2120.50100100000000
droEre2
TGGTGTCCGTGGAGACTGTAGGCTCTATTTTCATCAAGGCCCTGAAGCTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....GTCCGTGGAGACTGTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020100100
..........................ATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000110
...............CTGTAGGCTCTATTTTCATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
........................CTATTTTCATCAAGGCCCTGAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.............GACTGTAGGCTCTATTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............CTGTAGGCTCTATTTTCATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............ACTGTAGGCTCTATTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
....GTCCGTGGAGACTGTAGGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......CGTGGAGACTGTAGGCTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................ATTTTCATCAAGGCCCTGAA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000

Generated: 05/21/2015 at 03:57 PM