ID:

dvi_20427

 Coordinate:

scaffold_13049:18170838-18170988 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.5 -0.5 -0.1

Flybase annnotation

CDS [Dvir\GJ13743-cds]; exon [dvir_GLEANR_13610:2]; intron [Dvir\GJ13743-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCAGCAGCAGCAACAACAACATCACACGCATCACCAGCAACAGCAACAACAACAACAACATTACCAACAACAACAACAGCAGCAGCAGCAGCAACAACAACAAAATATTGCCAGCAACAATACGAATGCCGCGAACCAATTCAACGCCTCCTCTTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGGTATCAGGAAACGAACTCATCTCATTCACAGCAAAGCGGCAATGGAGCT
*********************************************************************************************************************************..(((...........)))...............................************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 SRR060678
9x140_testes_total
 SRR1106730
embryo_16-30h
 SRR060663
160_0-2h_embryos_total
 M047
female body
 SRR060687
9_0-2h_embryos_total
 V053
head
 V047
embryo
 SRR060686
Argx9_0-2h_embryos_total
 SRR060680
 9xArg_testes_total
 SRR060688
160_ovaries_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 SRR060654
160x9_ovaries_total
 M061
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060683
160_testes_total
 V116
male body
...............................................................................................................................................................CGTATATATACAATTTCGAT........................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CCGCGAACCAATTCAACGCCTCCT.................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ACAACATCACACGCATCACCAGCAACA................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CATTCACAGCAAAGCGGCA........ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GGGGGGTATCAGGAAACGAAC................................. 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AACATGACCAACAACAACAACAGCA......................................................................................................................................................................... 25 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGATTCACCGCAGATATTTC........................................................ 20 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACAACACACGCATTACCAGCC................................................................................................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AACAACAACAACAGCAGCAGCA................................................................................................................................................................... 22 0 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CAACAACAACAGCAGCAGCAG.................................................................................................................................................................. 21 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0
......................................................................ACAACAACAGCAGCAGCAGCAGCAAC........................................................................................................................................................... 26 0 20 0.10 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AGCAGCAGCAACAACAACA.................................................................................................................................................... 19 0 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................CAACAGCCACCACAACAACAACATTTCC......................................................................................................................................................................................... 28 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATCTCATTCCCAGCAAAC............. 18 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................ACAGCAACAACAACAACAGCATTA........................................................................................................................................................................................... 24 1 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................CAACAACAGCAGCAGCAGCAGCAAC........................................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................AACAGCAACAACAACAACAAC............................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GCAGCAGCAACAACAACAT.................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................AACAGCAGCAGCAGCAGCAACA.......................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................AACAACAACAGCAGCAGCAG.................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CAACAGCAGCAGCAGCAGCAA............................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CAACAACAACAGCAGCAGCAGC................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................CAACAACAACAGCAGCAGC.................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................CAGCAGCAGCAACAACAACA.................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................AACAACAGCAGCAGCAGCA................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................CAGCAACAGCAACAACAACAACA................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................AACAACAACAGCAGCAGCAGCAGCA............................................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................AGCAGCAGCAGCAGCAACAAC........................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CAACAGCAGCAGCAGCAGCA............................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TAGTCGTCGTCGTTGTTGTTGTAGTGTGCGTAGTGGTCGTTGTCGTTGTTGTTGTTGTTGTAATGGTTGTTGTTGTTGTCGTCGTCGTCGTCGTTGTTGTTGTTTTATAACGGTCGTTGTTATGCTTACGGCGCTTGGTTAAGTTGCGGAGGAGAATGAGCATATATATGTTAAAGCTAAGTGTCATATATAAAGGCTGTCCCATAGTCCTTTGCTTGAGTAGAGTAAGTGTCGTTTCGCCGTTACCTCGA
************************************************************************..(((...........)))...............................********************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060679
140x9_testes_total
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 M047
female body
 M027
male body		 SRR060664
9_males_carcasses_total
..................................................................................................................CGTTGTTATGGCTACGGGGC..................................................................................................................... 20 3 7 1.43 10 10 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TAGTCGTATGCTTTAGTAGAGT......................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................CGGTCGTTGTAATGCGTA........................................................................................................................... 18 2 7 0.29 2 0 0 0 1 1 0 0 0 0
.............................................................AATGGTTGTGGCTGTTGTCTTCG....................................................................................................................................................................... 23 3 5 0.20 1 0 1 0 0 0 0 0 0 0
..................................................................................................................CGTTGTGATGGTTACGGGGC..................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0
..................................................................................................................CGTTGTAATGGCTACGGCGC..................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................CGTTGTAATGCGTACGGAGC..................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................................................................CGTTGTTATTCCTACGGGGC..................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................................................................CGTTGTTATGACTACGGAGC..................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AGTCCTTTGCGCGAGTAG............................ 18 2 10 0.10 1 0 0 1 0 0 0 0 0 0
..................................................................................................................CGTTGTTATGGCTACGGAGC..................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0
...................TGTAGTGAGGGTAGTGGT...................................................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 0 0 1 0 0 0
.............................GAAGTGGTCGTTGTGGTTGTTGT....................................................................................................................................................................................................... 23 2 18 0.06 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................AAAGCCCAGTGTCGTATATAAAG........................................................ 23 3 18 0.06 1 0 0 0 0 0 0 1 0 0
.............................GAAGTGGTCGTTGTGGTTGTTG........................................................................................................................................................................................................ 22 2 20 0.05 1 0 0 0 0 0 0 0 1 0
...........GTTTTTCTAGTAGTGTGCGT............................................................................................................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AACGTTTCGTCGTTACCTC.. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:18170788-18171038 + dvi_20427 AT--------CAGCAGC---AG-CAACAACA-----------------------ACATCACACGCATCACCAGCAACA------------GCAACAACAAC---A---ACAACATTACCAAC---------A------------------ACAA---CA--------ACAGCAGC---AG------------CAGCAG------CAACAACAACAAAATATTGCCAGCAACAATACGAAT---G----------------CCGCGAACCAATTCAACGCCTCCTCTTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGGTATCAGGAAACGAACTCATCTCATTCACAGCAAAGCGGCAATGGAGCT
droMoj3 scaffold_6680:23748205-23748446 + AT--------CAGCAGC---AG-CA-----------------------------------------------------------------TCCACAGCAGC---A---GCAACAGCAGCACCTTAATGCGCA------------------TCATCAGCAACA---GC-----------AACAACAACAGTATCAACAG---------CAACAACAGAATATTGCCAGCAACAATGCGAATAGTG----------------CAGCGAACCAATTCAATGCCTCCTCTTATTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGAAACCAATTCGTCTCATTCGCAGCAAAGCGGTAACGGCACC
droGri2 scaffold_15110:24222300-24222538 + dgr_348 AT--------CAGCAGC---AG-CAGCAACACT---------------C-----ACATCACACACATCACCAGCAGCA------------GCAGCAGCAAC---A------------------------------------------------AC-----------------------AGCAGCAGCATTACCAACAG------CAACAACAACAAAATATTGCC---AACAATGCGAATGCAG----------------CGGCGAACCAATTCAATGCTTCCTCCTATTCGTATATATACAATTTCGATTCACAGTACATATTCCCGACAGGCTATCAGGAAACGAACTCATCCCATTCGCAGCAAAGTGCAAATGGAGCT
droWil2 scf2_1100000004762:1598388-1598630 - GTGGAGGAGGAGG---------------------------------------------------------------AG------------GCGGCGGCGGC---G---GCAATAGTGGAGGA----GGAG-C------------------TCATCAGCAGCA---GC-----------AGCAACAACATTACCAGC---------------AACAGAATCTATCA---AATAATGCCAATAATAACAACAACAACAACAACAAC-AATCAATTCACATCCCAATCCTATTCGTATATATACAATTTTGATTCACAGTATATATTCCCAACAGGCTATCAAGATACCACATCCTCACACTCGCAACAAAGCGGCGGTGGTG--
dp5 XR_group6:4206907-4207154 + dps_3032 AG--------CAACAGC---AG-CAGCAGCACCACAG------------------CA-----CGCACCACCAGCAGCA------------GCAGCAGCAGCAGCAGTCCGACCAGCAGGGGC---------A------------------CTACCAACAGCA---GC-----AGC---AG------------CAGCAG------CAGCAACAACAGAATATTGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTGGCGGTGGGGGC
droPer2 scaffold_9:2497470-2497714 + AG--------CAACAGC---AG-CAGCAGCACCACAG------------------CA-----CGCACCACCAGCAGCA------------GCAGCAGCAGC---AGTCCGACCAGCAGGGGC---------A------------------CTACCAACAGCA---GC-----AGC---AG------------CAGCAG------CAGCAACAACAGAATATTGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTGGCGGTGGGGGC
droAna3 scaffold_13337:18671425-18671657 + dan_2716 AC--------CACCAAC---AG-CAACAAC-----------------------------------AACACCAGCAGACGCA---------GCAGCAACAAC---ACCAACAACAGCAGCAGC---------A------------------ACAGCAACAACA---GC-----------AACAAGATCACTACCA------------ACAACAACAGAATATTGTC---AACAATGCCA----------------------------ATCAATTCAATGCCTCGTCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCCCAGCAGAGCGGG------GGC
droBip1 scf7180000396741:1862909-1863150 + CG--------CACCACC---AA-CAACAG--------------------------CA-----A----CACCAGCAGCA------------GCAGCAACACC---AGCAACAGCAGCAACAAC---------A------------------ACACCAGCA--------ACAACAACAGCAACAAGATCACTACCAACAA------CAACAACAACAGAATATTGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCATCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCTGGACACCACCTCCTCGCACTCGCAGCAGAGCGGG------GGC
droKik1 scf7180000302248:212216-212482 + AA--------CAGTGGTGGCAATCAGCAACACCACAA------------------TG-----CCCACCACCAGCAACA------------ACAGCAGCAGC---A---GCAACAACAGCAGC---------A------------------ACACCAGCA--------GCAGCAGCAACAACAGGAGCATTACCAACAACAACAGCAGCAACAACAGAATATAGCC---AACAATGCCA----------------------------ATCAATTCAACGCGTCATCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCCCAACAAAGTGCCGGCGGCGGC
droFic1 scf7180000453824:120209-120457 - GG--------CAGTGGC---AGCCAGCAGCACCACAG------------------CA-----ACCACCACCAGCAGCA------------GCAACAGCAGC---A---------GCAGCAGC---------A------------------ACACCAGCA--------ACAGCAGCAGCAGCAAGAGCACTACCAGCAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGTGGAGGGGGCGGT
droEle1 scf7180000490993:1675973-1676229 - AC--------CA-------------GCAACACCACAC------------------CA-----ATCACCACCAGCAACCGCAACAGCAGCAACAGCAACAGC---A---GCAACACCAGCAGC---------A------------------ACAACAACA--------GCAGCAGCAGCAACAAGATCACTACCAGCAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCACAGCAAAGCGGCGGAGGCGGT
droRho1 scf7180000779212:84557-84831 + GC------------------AACCAGCAACACCACAACA---------C------CA-----CTCACCACCAGCAACAGCAGCA------GCAGCAACAAC---A---ACAGCAGCAGCAGC---------AACACCAGCAACAACAACAACAGCAGCA--------GCAACAGCAGCAACAAGAACACTACCAACAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCCATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTACCAGGACACCACCTCCTCGCATTCGCAGCAAAGTGGCGGAGGCGGT
droBia1 scf7180000302529:742105-742332 + GG--------CAGCGGC---GGCCAGCAGCACCACAC------------------CA-----CCCACCACCAGCAGCA------------GCAGCACCAGC---A---------------------------------------------------GCAGCA---GC-----------AGCAGGAGCACTACCAGCAG---------CAGCAACAGAATATCGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCGGAGGGGGCGGT
droTak1 scf7180000415184:294102-294361 + GTGGGAGTGGCGGTGGC---AACCAGCAACACCACAG------------------CA-----GCCACCACCAGCAACA------------GCAGCAGCAGC---A------ACAACAGCAGC---------A------------------ACATCAGCA--------GCAGCAGCAGCAACAAGAACACTACCAGCAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGCGGAGGAGGCGGT
droEug1 scf7180000409471:731592-731833 + AG--------CAACA----------------CCACAGTA---------A------CA-----GCCACCACCAGCAGCA------------GCAGCAGCAAC---AGCAACAACAGCAGCAGC---------A------------------ACACCAACAGCA---GC-----------AGCAAGAACACTACCAGCAA---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCACACTCGCAGCAAAGCGGCGGTGGCGGT
dm3 chr3L:18756913-18757169 - AG--------CAGCA----------------CCACAGCAACCACAGCAACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAACAAC---A---GCAACAGCAGCAGC---------A------------------ACATCAGCAGCA---GC-----------AGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAACAGAGCGGAGGAGGCGGT
droSim2 3l:18384353-18384606 - dsi_8293 AG--------CAGCA----------------CCACAGCA---------ACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAACAAC---A---GCAGCAGCAGCAGC---------A------------------ACATCAGCA--------GCAGCAGCAGCAGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCGCACTCGCAGCAGAGCGGAGGAGGCGGT
droSec2 scaffold_19:729902-730149 - dse_940 AA--------CAGCA----------------CCACAGCA---------ACCACGGCA-----A---CCACCAGCAGCA------------GCAGCAACAAC---AACAGCAGCAGCAGCAGC---------A------------------ACATCAGCAGCA---GC-----------AGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTTGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCGGAGGAGGCGGT
droYak3 3L:15307634-15307884 + dya_803 AG--------CAGCA----------------CCACAGCA---------ACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAGCAAC---AACAACAACAGCAGCAGC---------A------------------ACACCAGCA------GC-----------AGCAAGAACACTACCAGCAGCAA---CAGCAACAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCGGAGGAGGCGGT
droEre2 scaffold_4784:15167923-15168173 + der_823 AG--------CAGCA----------------CCACAGCA---------ACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAACAGC---A---ACAACAGCAGCAGC---------A------------------ACACCAGCAGCAGCAGC-----------AGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCGGAGGAGGCGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AT--------CAGCAGC---AG-CAACAACA-----------------------ACATCACACGCATCACCAGCAACA------------GCAACAACAAC---A---ACAACATTACCAAC---------A------------------ACAA---CA--------ACAGCAGC---AG------------CAGCAG------CAACAACAACAAAATATTGCCAGCAACAATACGAAT---G----------------CCGCGAACCAATTCAACGCCTCCTCTTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGGTATCAGGAAACGAACTCATCTCATTCACAGCAAAGCGGCAATGGAGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................CGTATATATACAATTTCGAT........................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
....................................................................................................................................................................................................................................................................CCGCGAACCAATTCAACGCCTCCT..................................................................................................2411.001000000000000000000000000000000000000000000000000000000000010000
............................ACA-----------------------ACATCACACGCATCACCAGCAACA------------....................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CATTCACAGCAAAGCGGCA........1911.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................AAC---------A------------------ACAA---CA--------ACAGCAGC---AG------------CA............................................................................................................................................................................................22200.153003000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................C---------A------------------ACAA---CA--------ACAGCAGC---AG------------CAG...........................................................................................................................................................................................21200.153000000000000000000000000001000000000002000000000000000000000000
......................................................................................................................................................ACAA---CA--------ACAGCAGC---AG------------CAGCAG------CAAC..............................................................................................................................................................................26200.102001000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................AG------------CAGCAG------CAACAACAACA.......................................................................................................................................................................19200.102000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................CAA---CA--------ACAGCAGC---AG------------CAGCAG------CAAC..............................................................................................................................................................................25200.051000000000000000001000000000000000000000000000000000000000000000
..........................................................................AACA------------GCAACAACAAC---A---ACAAC.............................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
............GCAGC---AG-CAACAACA-----------------------ACAT....................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................A--------ACAGCAGC---AG------------CAGCAG------CAACA.............................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................A------------------ACAA---CA--------ACAGCAGC---AG------------CAG...........................................................................................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................CA--------ACAGCAGC---AG------------CAGCAG------CAA...............................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................C---------A------------------ACAA---CA--------ACAGCAGC---AG------------CAGC..........................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................C---------A------------------ACAA---CA--------ACAGCAGC---AG------------C.............................................................................................................................................................................................19200.051000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................C---AG------------CAGCAG------CAACAACAACA.......................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................AA---CA--------ACAGCAGC---AG------------CAGCA.........................................................................................................................................................................................19200.051000000000000000000000000000000000100000000000000000000000000000
......................................................................CAGCAACA------------GCAACAACAAC---A---ACA...............................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................A------------------ACAA---CA--------ACAGCAGC---AG------------CAGCAG------CA................................................................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................AGCAGC---AG------------CAGCAG------CAACAAC...........................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CA--------ACAGCAGC---AG------------CAGCAG------CA................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
AT--------CAGCAGC---AG-CA-----------------------------------------------------------------TCCACAGCAGC---A---GCAACAGCAGCACCTTAATGCGCA------------------TCATCAGCAACA---GC-----------AACAACAACAGTATCAACAG---------CAACAACAGAATATTGCCAGCAACAATGCGAATAGTG----------------CAGCGAACCAATTCAATGCCTCCTCTTATTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGAAACCAATTCGTCTCATTCGCAGCAAAGCGGTAACGGCACCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................GAAACCAATTCGTCTCATTC......................2011.001100000
................................................................................................................................................................................................................................................................................................................TTCGATTCACAGTATATATTTCC.......................................................2311.001000010
.................................................................................................CAGC---A---GCAACAGCAGCACC....................................................................................................................................................................................................................................................................19200.102000020
................................................................................................GCAGC---A---GCAACAGCAGCACC....................................................................................................................................................................................................................................................................20200.051000010
droGri2
AT--------CAGCAGC---AG-CAGCAACACT---------------C-----ACATCACACACATCACCAGCAGCA------------GCAGCAGCAAC---A------------------------------------------------AC-----------------------AGCAGCAGCATTACCAACAG------CAACAACAACAAAATATTGCC---AACAATGCGAATGCAG----------------CGGCGAACCAATTCAATGCTTCCTCCTATTCGTATATATACAATTTCGATTCACAGTACATATTCCCGACAGGCTATCAGGAAACGAACTCATCCCATTCGCAGCAAAGTGCAAATGGAGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................ACACT---------------C-----ACATCACACACATCACC.......................................................................................................................................................................................................................................................................................................................2311.00110
.....................................................................................................................................................................................................................................................................................................................................CCGACAGGCTATCAGGAAACGAACT................................2511.00110
..........CAGCAGC---AG-CAGCAACACT---------------C-----ACATCA..................................................................................................................................................................................................................................................................................................................................2611.00110
......................................................ACATCACACACATCACCAGCAGC.................................................................................................................................................................................................................................................................................................................2311.00110
....................................................................................................................................................................................................................................AACAATGCGAATGCAG----------------CGGCG.....................................................................................................................2120.50101
...........................................................................GCA------------GCAGCAGCAAC---A------------------------------------------------AC-----------------------AGCA........................................................................................................................................................................................................21200.10220
.................................................................................................................................................................................................AACAG------CAACAACAACAAAAT...................................................................................................................................................................20200.05110
................................................................CATCACCAGCAGCA------------GCAGCA..............................................................................................................................................................................................................................................................................................20200.05110
droWil2
GTGGAGGAGGAGG---------------------------------------------------------------AG------------GCGGCGGCGGC---G---GCAATAGTGGAGGA----GGAG-C------------------TCATCAGCAGCA---GC-----------AGCAACAACATTACCAGC---------------AACAGAATCTATCA---AATAATGCCAATAATAACAACAACAACAACAACAAC-AATCAATTCACATCCCAATCCTATTCGTATATATACAATTTTGATTCACAGTATATATTCCCAACAGGCTATCAAGATACCACATCCTCACACTCGCAACAAAGCGGCGGTGGTG--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...GAGGAGGAGG---------------------------------------------------------------AG------------GCGGCGGCGGC---G---GCA...............................................................................................................................................................................................................................................................................2711.00110000
....AGGAGGAGG---------------------------------------------------------------AG------------GCGGCGGCGGC---G---GC................................................................................................................................................................................................................................................................................2511.00100010
...GAGGAGGAGG---------------------------------------------------------------AG------------GCGGCGGCGGC---G---GC................................................................................................................................................................................................................................................................................2611.00110000
....................................................................................................................................................................................................................................................................................ATCCCAATCCTATTCGTATAT.....................................................................................2111.00100010
...............................................................................................................ATAGTGGAGGA----GGAG-C------------------TC......................................................................................................................................................................................................................................1811.00100010
.........................................................................................................................................................................................................................................................................................................................CAGTATATATTCCCAACAG..................................................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................TATCAAGATACCACATCCTCACACTCG.....................2711.00101000
.............................................................................................GCGGCGGC---G---GCAATAGTGGAGGA----................................................................................................................................................................................................................................................................2311.00100100
..GGAGGAGGAGG---------------------------------------------------------------AG------------GCGGC...............................................................................................................................................................................................................................................................................................18150.13211000
.........GAGG---------------------------------------------------------------AG------------GCGGCGGCGGC---G---GC................................................................................................................................................................................................................................................................................2080.13100010
........GGAGG---------------------------------------------------------------AG------------GCGGCGGCGGC---......................................................................................................................................................................................................................................................................................1890.11101000
........................................................................................................................................................ATCAGCAGCA---GC-----------AGCAACA.....................................................................................................................................................................................................19200.05100010
dp5
AG--------CAACAGC---AG-CAGCAGCACCACAG------------------CA-----CGCACCACCAGCAGCA------------GCAGCAGCAGCAGCAGTCCGACCAGCAGGGGC---------A------------------CTACCAACAGCA---GC-----AGC---AG------------CAGCAG------CAGCAACAACAGAATATTGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTGGCGGTGGGGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................ACAGGCTACCAGGACACCA...................................1911.0010010000000
..............................................................................................................................................................................C---AG------------CAGCAG------CAGCAACAACAGAATATTGC..............................................................................................................................................................2911.0010010000000
.............................................................................................................................................................................................................................................................................................................................................CTACCAGGACACCACCTCCTCCC..........................2311.0010010000000
..............................................................................................................................................................................................................GCAACAACAGAATATTGCC---A.........................................................................................................................................................2011.0010000100000
.........................................................................................................................................................................................................................ATATTGCC---AACAACGCCA----------------------------AC..................................................................................................................2011.0010010000000
......................................................................................................................................................CTACCAACAGCA---GC-----AGC---AG------------C.............................................................................................................................................................................................2020.5010100000000
..................................................................................................AGCAGCAGTCCGACCAG...........................................................................................................................................................................................................................................................................1730.3310000000001
..................................................................................................................................................................................AG------------CAGCAG------CAGCAACAACA.......................................................................................................................................................................19200.1020200000000
..........................................................................................................................................................CAACAGCA---GC-----AGC---AG------------CAGCAG------CAGCAAC...........................................................................................................................................................................28190.0510001000000
.....................................................................................................................................................................GC-----AGC---AG------------CAGCAG------CAGCAACAAC........................................................................................................................................................................23200.0510000100000
...................................................................CACCAGCAGCA------------GCAGCAGC............................................................................................................................................................................................................................................................................................19200.0510100000000
..................................................................CCACCAGCAGCA------------GCAGCAG.............................................................................................................................................................................................................................................................................................19200.0510100000000
...............................................................GCACCACCAGCAGCA------------GCAGCA..............................................................................................................................................................................................................................................................................................21200.0510000100000
................................................................CACCACCAGCAGCA------------GCAGCA..............................................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
AG--------CAACAGC---AG-CAGCAGCACCACAG------------------CA-----CGCACCACCAGCAGCA------------GCAGCAGCAGC---AGTCCGACCAGCAGGGGC---------A------------------CTACCAACAGCA---GC-----AGC---AG------------CAGCAG------CAGCAACAACAGAATATTGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAACTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGTGGCGGTGGGGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................AG------------CAGCAG------CAGCAACAAC........................................................................................................................................................................18200.051010000
.................................................................ACCACCAGCAGCA------------GCAGCAGCA...........................................................................................................................................................................................................................................................................................22200.051010000
..........................................................................................................................................................CAACAGCA---GC-----AGC---AG------------CAGCAG------CAGC..............................................................................................................................................................................25200.051001000
droAna3
AC--------CACCAAC---AG-CAACAAC-----------------------------------AACACCAGCAGACGCA---------GCAGCAACAAC---ACCAACAACAGCAGCAGC---------A------------------ACAGCAACAACA---GC-----------AACAAGATCACTACCA------------ACAACAACAGAATATTGTC---AACAATGCCA----------------------------ATCAATTCAATGCCTCGTCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCCCAGCAGAGCGGG------GGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................ATTCCCGACAGGCTACCAGGACACCACCC................................2911.001010000
.................................................................................................................................................................................................................................................................................CAATGCCTCGTCCTACTCG..........................................................................................1911.001100000
.............................................................................................................CAACAGCAGCAGC---------A------------------ACAGCAACA...............................................................................................................................................................................................................................23200.357130003
....................................................................................................C---ACCAACAACAGCAGCAGC---------A------------------A.......................................................................................................................................................................................................................................2130.331000001
...............................................................................................................ACAGCAGCAGC---------A------------------ACAGCAACA...............................................................................................................................................................................................................................21200.153000003
..........................................................................................................CAACAACAGCAGCAGC---------A------------------ACAGC...................................................................................................................................................................................................................................22200.102010001
...........................................................................................................AACAACAGCAGCAGC---------A------------------ACAGCAACA...............................................................................................................................................................................................................................25200.102000002
...........................................................................................................AACAACAGCAGCAGC---------A------------------ACAGCAAC................................................................................................................................................................................................................................24200.102000002
.................................................................................................................AGCAGCAGC---------A------------------ACAGCAACAACA---GC-----------............................................................................................................................................................................................................24200.051010000
..........................................................................................................CAACAACAGCAGCAGC---------A------------------ACAGCAAC................................................................................................................................................................................................................................25200.051010000
...........................................................................................................AACAACAGCAGCAGC---------A------------------ACAGC...................................................................................................................................................................................................................................21200.051000010
.............................................................................................................CAACAGCAGCAGC---------A------------------ACAGCA..................................................................................................................................................................................................................................20200.051010000
................................................................................................................CAGCAGCAGC---------A------------------ACAGCAACAAC.............................................................................................................................................................................................................................22200.051010000
.............................................................................................................CAACAGCAGCAGC---------A------------------ACAGC...................................................................................................................................................................................................................................19200.051100000
...........................................................................................................AACAACAGCAGCAGC---------A------------------ACAGCA..................................................................................................................................................................................................................................22200.051100000
droBip1
CG--------CACCACC---AA-CAACAG--------------------------CA-----A----CACCAGCAGCA------------GCAGCAACACC---AGCAACAGCAGCAACAAC---------A------------------ACACCAGCA--------ACAACAACAGCAACAAGATCACTACCAACAA------CAACAACAACAGAATATTGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCATCCTACTCGTACATATACAATTTCGACTCACAGTACATATTCCCGACAGGCTACCTGGACACCACCTCCTCGCACTCGCAGCAGAGCGGG------GGCSizeHit CountTotal NormTotal
No Reads
droKik1
AA--------CAGTGGTGGCAATCAGCAACACCACAA------------------TG-----CCCACCACCAGCAACA------------ACAGCAGCAGC---A---GCAACAACAGCAGC---------A------------------ACACCAGCA--------GCAGCAGCAACAACAGGAGCATTACCAACAACAACAGCAGCAACAACAGAATATAGCC---AACAATGCCA----------------------------ATCAATTCAACGCGTCATCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCCCAACAAAGTGCCGGCGGCGGCSizeHit CountTotal NormTotal
No Reads
droFic1
GG--------CAGTGGC---AGCCAGCAGCACCACAG------------------CA-----ACCACCACCAGCAGCA------------GCAACAGCAGC---A---------GCAGCAGC---------A------------------ACACCAGCA--------ACAGCAGCAGCAGCAAGAGCACTACCAGCAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGTGGAGGGGGCGGTSizeHit CountTotal NormTotal
No Reads
droEle1
AC--------CA-------------GCAACACCACAC------------------CA-----ATCACCACCAGCAACCGCAACAGCAGCAACAGCAACAGC---A---GCAACACCAGCAGC---------A------------------ACAACAACA--------GCAGCAGCAGCAACAAGATCACTACCAGCAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCACAGCAAAGCGGCGGAGGCGGTSizeHit CountTotal NormTotal
No Reads
droRho1
GC------------------AACCAGCAACACCACAACA---------C------CA-----CTCACCACCAGCAACAGCAGCA------GCAGCAACAAC---A---ACAGCAGCAGCAGC---------AACACCAGCAACAACAACAACAGCAGCA--------GCAACAGCAGCAACAAGAACACTACCAACAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCCATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTACCAGGACACCACCTCCTCGCATTCGCAGCAAAGTGGCGGAGGCGGTSizeHit CountTotal NormTotal
No Reads
droBia1
GG--------CAGCGGC---GGCCAGCAGCACCACAC------------------CA-----CCCACCACCAGCAGCA------------GCAGCACCAGC---A---------------------------------------------------GCAGCA---GC-----------AGCAGGAGCACTACCAGCAG---------CAGCAACAGAATATCGCC---AACAACGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCGGAGGGGGCGGTSizeHit CountTotal NormTotal
No Reads
droTak1
GTGGGAGTGGCGGTGGC---AACCAGCAACACCACAG------------------CA-----GCCACCACCAGCAACA------------GCAGCAGCAGC---A------ACAACAGCAGC---------A------------------ACATCAGCA--------GCAGCAGCAGCAACAAGAACACTACCAGCAG---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCACTCGCAGCAAAGCGGAGGAGGCGGTSizeHit CountTotal NormTotal
No Reads
droEug1
AG--------CAACA----------------CCACAGTA---------A------CA-----GCCACCACCAGCAGCA------------GCAGCAGCAAC---AGCAACAACAGCAGCAGC---------A------------------ACACCAACAGCA---GC-----------AGCAAGAACACTACCAGCAA---------CAACAACAGAATATTGCC---AACAATGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCACACTCGCAGCAAAGCGGCGGTGGCGGTSizeHit CountTotal NormTotal
No Reads
dm3
AG--------CAGCA----------------CCACAGCAACCACAGCAACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAACAAC---A---GCAACAGCAGCAGC---------A------------------ACATCAGCAGCA---GC-----------AGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAACAGAGCGGAGGAGGCGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................TCCTCACACTCGCAACAGAGCGGA.........24123.00230000000000000000000000000000000000000000000100010000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000002000000000000603040000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................CGCAACAGAGCGGAGGAGGCGG.22110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010008000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GACACCACCTCCTCACACTCGCAAC.................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCAACAGAGCGGAGGAGG....1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TCGCAACAGAGCGGAGGAGGC...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000
......................................................................................................................................................................C-----------AGCAAGAACACTACCAGCAG------CAACA.............................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCCTCACACTCGCAACAGAGCGGAG........2512.0020000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAACAGAGCGGAGGAGGC...2612.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................TGCCA----------------------------ATCAATTCAACTCCTCGTCC................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................AGCAAGAACACTACCAGCAG------CAAC..............................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCTACCAGGACACCACCTCCTCA...........................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AACAGAGCGGAGGAGGCGGT2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TATACAATTTCGATTCACAGA.................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CTCCTCACACTCGCAACAGAGCGGA.........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTCCCGACAGGCTACCAGGAC.......................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGTATATATTCCCGACAGGCT...............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GACACCACCTCCTCACACTCGC....................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACACCACCTCCTCACACTCGC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GCC---AACAATGCCA----------------------------ATCAATTCAACTCC......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................................................................................................................................................................................................................................................................TATATACAATTTCGATTCACAGTATA..............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCAACAGAGCGGAGGAGGA...2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACTCCTCGTCCTACTCGTATATATACA................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................TCAATTCAACTCCTCGTCCTACTCG..........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CCA----------------------------ATCAATTCAACTCCTCGTCCTAC.............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TATCGCC---AACAATGCCA----------------------------ATCAATTCAAC.........................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................AACAATGCCA----------------------------ATCAATTCAACTCC......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................ATTCACAGTATATATTCCCGAC....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GCAAGAACACTACCAGCAG------CAACAG............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAACAGAGCGGAGGAGGCGGT2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CACCACCAGCAGCA------------GCAGCAACAAC---A---..................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TCACACTCGCAACAGAGCGGAGGAGGC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CACCTCCTCACACTCGCAACAGAGCGGA.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CAGGACACCACCTCCTCACACTCGCAACA................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CACTACCAGCAG------CAACAGCAACAGAA....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ACCTCCTCACACTCGCAACAGAGCG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CAGAGCGGAGGAGGCGGT1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TCACACTCGCAACAGAGCGGAGGAGGCGGC3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GC-----------AGCAAGAACACTACCAGCAG------CA................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CGACAGGCTACCAGGACACC....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACTCCTCGTCCTACTCGTATATAT...................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCAACAGAGCGGAGGAGGC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................TACCAGCAG------CAACAGCAACAGAATA..................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CAG------CAACAGCAACAGAATATCGCC---AA........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAACAGAGCGGAGGAGG....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAACAGAGCGGAGGA......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TATATACAATTTCGATTCACAGTA................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACTCGCAACAGAGCGGAGGAGGC...2311.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ACCACCACCAGCAGCA------------GCAGCAACAA..........................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAACAAC---A---GCAACAGCAGCAGC---------A------------------ACAT....................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCAGCAACAAC---A---GCAACAGCAGCA......................................................................................................................................................................................................................................................................24180.3970000000000000000000000000000000000000000000000000000000000000000000000000000000010600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ACCAGCAGCA------------GCAGCAACAAC---A---GC................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GCA------------GCAGCAACAAC---A---GCAACAGCAGC.......................................................................................................................................................................................................................................................................26100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AACAGCAGCAGC---------A------------------ACATCAGCAGCA---.........................................................................................................................................................................................................................2570.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
........................................................................................................................GC---------A------------------ACATCAGCAGCA---GC-----------AGC.........................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
................................................................CACCACCAGCAGCA------------GCAGCAAC............................................................................................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGCAACAAC---A---GCAACAGCAGC.......................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
...........................................................................GCA------------GCAGCAACAAC---A---GCAAC.............................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................AGCAACAAC---A---GCAACAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................25180.1730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CAGCA------------GCAGCAACAAC---A---GC................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
................................................................................................................CAGCAGCAGC---------A------------------ACATCAGCAG..............................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................AAC---A---GCAACAGCAGCAGC---------A------------------ACATC...................................................................................................................................................................................................................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GCAGCA------------GCAGCAACAAC---A---GCAACAGC..........................................................................................................................................................................................................................................................................2680.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............................................................................................GCAACAAC---A---GCAACAGCAGCAGC---------...........................................................................................................................................................................................................................................................23190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
........................................................................................................................GC---------A------------------ACATCAGCAGCA---GC-----------A...........................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CACCAGCAGCA------------GCAGCAACAAC---A---..................................................................................................................................................................................................................................................................................23100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................A------------GCAGCAACAAC---A---GCAACAGC..........................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................GCAGC---------A------------------ACATCAGCAGCA---GC-----------AGC.........................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........................................................................................................................C---------A------------------ACATCAGCAGCA---GC-----------AGCA........................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................C---A---GCAACAGCAGCAGC---------A------------------ACATCA..................................................................................................................................................................................................................................23100.1010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................GC---------A------------------ACATCAGCAGCA---GC-----------AG..........................................................................................................................................................................................................19200.1020000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................A---GCAACAGCAGCAGC---------A------------------ACA.....................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.............................................................................................GCAACAAC---A---GCAACAGCAGC.......................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.......................................................................................................................AGC---------A------------------ACATCAGCAGCA---GC-----------AGCA........................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.............................................................................................GCAACAAC---A---GCAACAGCAGCAG.....................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................................................................................................AACAGCAGCAGC---------A------------------ACATCAGCA...............................................................................................................................................................................................................................22100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................CAACAAC---A---GCAACAGCAGCAGC---------...........................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
................................................................................................................................................................................................CAGCAG------CAACAGCAACAGAA....................................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
................................................................................................ACAAC---A---GCAACAGCAGCAGC---------A------------------AC......................................................................................................................................................................................................................................23130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCAGCAACAAC---A---GCAACAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................CCACCACCAGCAGCA------------GCAGC...............................................................................................................................................................................................................................................................................................20140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AACAGCAGCAGC---------A------------------ACATCAGC................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................CAGCAACAAC---A---GCAACAGCAGCAGC---------...........................................................................................................................................................................................................................................................25160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................CAGCAGCAGC---------A------------------ACATCAGCAGCA---G........................................................................................................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAGCAACAAC---A---GCAACAGCAGCAG.....................................................................................................................................................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AGCAGCAGC---------A------------------ACATCAGCAGCA---GC-----------............................................................................................................................................................................................................24190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................GCA------------GCAGCAACAAC---A---GCAACA............................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCAGCAACAAC---A---GCAACAGCA.........................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GCAACAGCAGCAGC---------A------------------ACA.....................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CAGC---------A------------------ACATCAGCAGCA---GC-----------AG..........................................................................................................................................................................................................21200.0510000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AGCAGCAGC---------A------------------ACATCAGCAGC.............................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................GCAGCAACAAC---A---GCAACA............................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CA------------GCAGCAACAAC---A---GCAACAGCA.........................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CAGCA------------GCAGCAACAAC---A---GCAAC.............................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................GC---------A------------------ACATCAGCAGCA---GC-----------AGCA........................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CAGCA------------GCAGCAACAAC---A---GCAA..............................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................................................................AGCAGC---------A------------------ACATCAGCAGCA---GC-----------AGC.........................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................ACCACCAGCAGCA------------GCAGCA..............................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................ACAGCAGCAGC---------A------------------ACATCAGC................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................CAGCAACAAC---A---GCAACAGCAGC.......................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGCA------------GCAGCAACAAC---A---GCA...............................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAAC---A---GCAACAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GCAGCA------------GCAGCAACAAC---A---G.................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AACAAC---A---GCAACAGCAGCA......................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................AAC---A---GCAACAGCAGCAGC---------A------------------AC......................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................CAGCAGCAGC---------A------------------ACATCAGCA...............................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CA------------GCAGCAACAAC---A---GCAACAGCAG........................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AG--------CAGCA----------------CCACAGCA---------ACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAACAAC---A---GCAGCAGCAGCAGC---------A------------------ACATCAGCA--------GCAGCAGCAGCAGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCGCACTCGCAGCAGAGCGGAGGAGGCGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................AACAGAATATCGCC---AACAATG...................................................................................................................................................2112.00200000000000002000
.............................................................................................................................................................................................................................................A----------------------------ATCAATTCAACTCCTCGTCCTACTCGTA........................................................................................2912.00200200000000000000
..............................................................................................................................................................................CAGCAGCAAGAACACTACCAG...........................................................................................................................................................................................2121.00200000000000002000
.............................................................................................................................................................................................................................................................................AATTCAACTCCTCGTCCTACTCG..........................................................................................2311.00100100000000000000
.................................ACAGCA---------ACCACGGCA-----ACCACC..........................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................GCACTCGCAGCAGAGCGGAGGA......2211.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................CTCGCAGCAGAGCGGAGGAGGC...2211.00100000000000100000
.........................................................................................................................................................................................................................................TGCCA----------------------------ATCAATTCAACTCCTCGTCC................................................................................................2511.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................TCCCGACAGGCTACCAGGACA......................................2111.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................GACAGGCTACCAGGACACCA...................................2011.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................CTCGCACTCGCAGCAGAGCGGA.........2211.00100001000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCCTCGCACTCGCAGCAGAGCGGA.........2411.00100000001000000000
.......................................................................................................................................................................................................................................AATGCCA----------------------------ATCAATTCAACTCCTC....................................................................................................2311.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGAGCGGAGGAGGCG..2111.00100000000000001000
................................................................................................................................................................................................................................................................................TCAACTCCTCGTCCTACTCG..........................................................................................2011.00100100000000000000
................................................................................................................................................................................................................................................................................TCAACTCCTCGTCCTACTCGT.........................................................................................2111.00100000000000100000
....................................................................................................................................................................................................................................................................................................................................CCCGACAGGCTACCAGGACAC.....................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................CGCACTCGCAGCAGAGCGGA.........2011.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AGCAGAGCGGAGGAGGCGG.1920.50100000000000001000
...............................................................................................................................................................................AGCAGCAAGAACACTACCAGC..........................................................................................................................................................................................2120.50101000000000000000
..................................................................................................AAC---A---GCAGCAGCAGCAGC---------A------------------ACATC...................................................................................................................................................................................................................................24150.07100000000001000000
..............................................................................................CAACAAC---A---GCAGCAGCAGCAGC---------...........................................................................................................................................................................................................................................................22200.05100000000000100000
........................................................................................................................GC---------A------------------ACATCAGCA--------GCAGCA.................................................................................................................................................................................................................18200.05100000000001000000
droSec2
AA--------CAGCA----------------CCACAGCA---------ACCACGGCA-----A---CCACCAGCAGCA------------GCAGCAACAAC---AACAGCAGCAGCAGCAGC---------A------------------ACATCAGCAGCA---GC-----------AGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTTGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCGGAGGAGGCGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................TCGCAGCAGAGCGGAGGAGGC...2111.0010010
................................................................................................................................................................................................................................................................................................................TTTGATTCACAGTATATATT..........................................................2011.0011000
................................................ACCACGGCA-----A---CCACCAGCAGC.................................................................................................................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................................................................................................................................................................................................TCGCAGCAGAGCGGAGGAGGCGGT2411.0010010
..............................................................................................................................................................................................................................................................................................................................................................CCTCACACTCGCAGCAGAGCG...........2111.0010010
.........................................................................................................................................................................................................................................................................................................................................................................CAGCAGAGCGGAGGAGGC...1821.0020011
......................................................................CAGCAGCA------------GCAGCAACAAC---......................................................................................................................................................................................................................................................................................19200.0510001
...................................................................................................AC---AACAGCAGCAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................21200.0510010
droYak3
AG--------CAGCA----------------CCACAGCA---------ACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAGCAAC---AACAACAACAGCAGCAGC---------A------------------ACACCAGCA------GC-----------AGCAAGAACACTACCAGCAGCAA---CAGCAACAACAGAATATCGCC---AACAATGCCA----------------------------ATCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCACACTCGCAGCAGAGCGGAGGAGGCGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAGCAGAGCGGAGG.......2211.00101000000000
..........................................................................................................................................................CAGCA------GC-----------AGCAAGAACACTACC.............................................................................................................................................................................................2211.00100100000000
...............................................................................................................................................................................................................................................................................TTCAACTCCTCGTCCTACTC...........................................................................................2011.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................CACACTCGCAGCAGAGCGGAGGAGGC...2611.00100000010000
.....................................................................................................................................................................GC-----------AGCAAGAACACTACCAGCAGCAA---C.................................................................................................................................................................................2611.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................TCCTCACACTCGCAGCAGAGCGGAG........2511.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................CTCACACTCGCAGCAGAGCGGAGGA......2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................CACTCGCAGCAGAGCGGAGGAGGC...2411.00100100000000
.................................................................................................................AGCAGCAGC---------A------------------ACACCAGCA------GC-----------............................................................................................................................................................................................................21110.09100100000000
.............................................................................................GCAGCAAC---AACAACAACAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................27120.08101000000000
.............................................................................................................CAACAGCAGCAGC---------A------------------ACACC...................................................................................................................................................................................................................................19190.05101000000000
..................................................................................................AAC---AACAACAACAGCAGCAGC---------A------------------AC......................................................................................................................................................................................................................................24200.05100000010000
...............................................................................................AGCAAC---AACAACAACAGCAGC.......................................................................................................................................................................................................................................................................21200.05101000000000
..........................................................................................................CAACAACAGCAGCAGC---------A------------------AC......................................................................................................................................................................................................................................19200.05100100000000
....................................................................................................C---AACAACAACAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................20200.05100001000000
................................................................CACCACCAGCAGCA------------GCAGCA..............................................................................................................................................................................................................................................................................................20200.05101000000000
........................................................................GCAGCA------------GCAGCAGCAAC---AACA..................................................................................................................................................................................................................................................................................21200.05101000000000
........................................................................GCAGCA------------GCAGCAGCAAC---AACAACAA..............................................................................................................................................................................................................................................................................25200.05101000000000
..........................................................................................................CAACAACAGCAGCAGC---------A------------------ACA.....................................................................................................................................................................................................................................20200.05100000010000
droEre2
AG--------CAGCA----------------CCACAGCA---------ACCACGGCA-----ACCACCACCAGCAGCA------------GCAGCAACAGC---A---ACAACAGCAGCAGC---------A------------------ACACCAGCAGCAGCAGC-----------AGCAAGAACACTACCAGCAG------CAACAGCAACAGAATATCGCC---AACAATGCCA----------------------------ACCAATTCAACTCCTCGTCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCGGAGGAGGCGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGAGCGGAGGAGGCGGG2311.0011000000
..............................................................................................................................................................................................................................................................................................................................................TACCAGGACACCACCTCCT.............................1911.0011000000
.............................................................................................GCAACAGC---A---ACAACAGCAGC.......................................................................................................................................................................................................................................................................20200.1021100000
..........................................................................................GCAGCAACAGC---A---ACAACAGCAGCA......................................................................................................................................................................................................................................................................24110.0910100000
...................................................................CACCAGCAGCA------------GCAGCAACAG..........................................................................................................................................................................................................................................................................................21130.0810001000
..............................................................ACCACCACCAGCAGCA------------GCAGC...............................................................................................................................................................................................................................................................................................21170.0610000010
..........................................................................AGCA------------GCAGCAACAGC---A---ACAA..............................................................................................................................................................................................................................................................................20200.0510001000
..................................................................................................AGC---A---ACAACAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................19200.0511000000
.....................................................................CCAGCAGCA------------GCAGCAACAGC---......................................................................................................................................................................................................................................................................................20200.0510000010
...................................................................................................GC---A---ACAACAGCAGCAGC---------A------------------ACA.....................................................................................................................................................................................................................................21200.0510000100
.......................................................................................................................................................CACCAGCAGCAGCAGC-----------AGCA........................................................................................................................................................................................................20200.0510000010
...................................................................................................................................A------------------ACACCAGCAGCAGCAGC-----------A...........................................................................................................................................................................................................19200.0511000000
............................................................................................AGCAACAGC---A---ACAACAGCAG........................................................................................................................................................................................................................................................................20200.0511000000
......................................................................................................................................................ACACCAGCAGCAGCAGC-----------AGC.........................................................................................................................................................................................................20200.0510100000
...............................................................................................AACAGC---A---ACAACAGCAGCAGC---------...........................................................................................................................................................................................................................................................21200.0510010000
...............................................................................................AACAGC---A---ACAACAGCAGCAGC---------A------------------........................................................................................................................................................................................................................................22200.0510000010
................................................................CACCACCAGCAGCA------------GCAGC...............................................................................................................................................................................................................................................................................................19200.0511000000

Generated: 05/17/2015 at 03:44 AM