ID:

dvi_20406

 Coordinate:

scaffold_13049:18010594-18010744 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.0 -10.8 -10.4 -10.3

Flybase annnotation

CDS [Dvir\GJ13738-cds]; exon [dvir_GLEANR_13606:9]; intron [Dvir\GJ13738-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTAAAGGACCCATTGGAAACCATTCCAAAAGCATTGATTAAATGGAATCGGTAAGTCAAATTTCTAATAAAAATTAAATACGACTAAGCACTAACCCTTTTTATTGACAGCTTGTACTGGCAGCATCAATGTCTTAAAGCTATAATTTATGTTATAATCTTTTATATATTTTGGTTTTTTTTGAAATGTCTATTTGGCGTTCTTTTAGCTTAGATTCTCTGTCTACAAACAAAATTTTTTGTTTTTCATTT
****************************************************************************************************************......(((..((..........(((((((.(((.((((...........)))).))).)))))))................))..)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060677
Argx9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060675
140x9_ovaries_total
 SRR060674
9x140_ovaries_total
 M047
female body
 SRR060679
140x9_testes_total
 SRR060654
160x9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060656
9x160_ovaries_total
 GSM1528803
follicle cells		 SRR060673
9_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060670
9_testes_total
 SRR060688
160_ovaries_total
 SRR1106718
embryo_6-8h
 SRR1106729
mixed whole adult body
 SRR060686
Argx9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060664
9_males_carcasses_total
 SRR060683
160_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106716
embryo_4-6h
 SRR1106720
embryo_8-10h
 SRR1106728
larvae
 SRR1106730
embryo_16-30h
 M061
embryo
 SRR060667
160_females_carcasses_total
 V116
male body		 SRR060663
160_0-2h_embryos_total
..................................................................................................................................................................TATATATTTTGGGTTTTTTTGAAATGTC............................................................. 28 1 1 12.00 12 6 0 0 3 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TCCAAAAGCATTGATTAAATGGAATCGC........................................................................................................................................................................................................ 28 1 1 9.00 9 1 2 0 3 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.TAAAGGACCCATTGGAAACCATTCCAA............................................................................................................................................................................................................................... 27 0 1 8.00 8 1 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.TAAAGGACCCATTGGAAACCATTCCA................................................................................................................................................................................................................................ 26 0 1 4.00 4 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TAAAGGACCCATTGGAAACCATTCCAAA.............................................................................................................................................................................................................................. 28 0 1 3.00 3 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TGAAATGTCTATTTGGCGTTCTTT.............................................. 24 0 1 3.00 3 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGCGTTCTTTTAGCTTAGATTCTCTG.............................. 28 0 1 3.00 3 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................AAGCATTGATTAAATGGAATCGCT....................................................................................................................................................................................................... 24 1 1 3.00 3 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGTACTGGCAGCATCAATGTCTTAAAG................................................................................................................ 27 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTGGGTTTTTTTGAAATGTCTATTTGGC..................................................... 28 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTGGGTTTTTTTGAAATGTCTATTT........................................................ 25 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTGAAATGTCTATTTGGCGTT.................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TAGATTCTCTGTCTACAAACAAAATT............... 26 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TCGCTTGTACTGGCAGCATCAATGTC...................................................................................................................... 26 2 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGTACTGGCAGCATCAATGTCTTAAAGC............................................................................................................... 28 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TCGCTTGTACTGGCAGCATCAATGT....................................................................................................................... 25 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TATATATTTTGGGTTTTTTTGAAATG............................................................... 26 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CCAAAAGCATTGATTAAATGGAATCGCT....................................................................................................................................................................................................... 28 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGCGTTCTTTTAGCTTAGATTC.................................. 23 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTGGGTTTTTTTGAAATGTCTATTT........................................................ 26 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TAAAGGACCCATTGGAAACCATTC.................................................................................................................................................................................................................................. 24 0 1 2.00 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TATATTTTGGGTTTTTTTGAAATGTC............................................................. 26 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTGTCTACAAACAAAATTTCTTATTTTT..... 28 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTCTATTTGGCGTTCTTTTAGCTTAGAT.................................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATATTTTGGGTTTTTTTGAAATGTC............................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTTAGCTTAGATTCTCTGTCTACAAAC..................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGACAGCTTGTACTGGCAGCATCAATG........................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTTATAATCTTTTATATATTTTGGGT........................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCTCTGTCTACAAACAAAATTTCTTTTT........ 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GGACCCATTGGAAACCATTCCAAAAG............................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTTAGCTTAGATTCTCTGTCTACA........................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TTCCAAAAGCATTGATTAAA................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................TAACCCTTTTTATTGACAG............................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGTACTGGCAGCATCAATGTCTTA................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.TAAAGGACCCATTGGAAACCAT.................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TATTTTGGGTTTTTTTGAAATG............................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCAATGTCTTAAAGCTATAATTTATGT................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TGAAATGTCTATTTGGCG.................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTATTTGGCGTTCTTTTAGCTTAGATTC.................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TTTATATATTTTGGGTTTTTTTGAAATG............................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGCGTTCTCTTAGCTTAGATTCTCTG.............................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCAATGTCTTAAAGCTATAATTTATG.................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TAGATTCTCTGTCTACAAACAAAAT................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCTACAAACAAAATTTCTTATTTTTCATT. 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTTTATATATTTTGGGTTTTTTTGAAA................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCTTTTATATATTTTGGGTTTTTTTG.................................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGCGTTCTTTTAGCTTAGATTCTC................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGCGTTCTCTTAGCTTAGATTCTC................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGCGTTCTTTTAGCTTAGATTCTCT............................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGGAAACCATTCCAAAAGCATTGAT..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATTCCAAAAGCATTGATTAAA................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................TTTATATATTTTGGGTTTTTTTGAAA................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCTGTCTACAAACAAAATTTTTTGT......... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AGCATTGATTAAATGGAATCGCT....................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TGGCAGCATCAATGTCTTAAAGCTAT............................................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TAAAGGACCCATTGGAAACCATTCCAAAA............................................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTATTTGGCGTTCTTTTAGCTTAGAT.................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTACTGGCAGCATCAATGTCTTAAA................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTAGCTTAGATACTCTGTCTACAAACA.................... 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TGAAATGTCTATTTGGCGTTCTTTTAGC.......................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GTCTTAAAGCTATAATTTATGTTATA............................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACTGGCAGCATCAATGTCTTAAAGCTA............................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGCGTTCTTTTAGCTTAGATTCTCTG.............................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TATGTTATAATCTTTTATATATTTTGGG............................................................................ 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGGTTTTTTTGAAATGTCTATT......................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACCATTCCAAAAGCATTGATTAAAT................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGCGTTCTTTTAGCTTAGAT.................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TCCAAAGCATTGATTAAATGGAATCGC........................................................................................................................................................................................................ 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTGAAATGTCTATTTGGCGTTCTTTTAG........................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TGTCTTAAAGCTATAATTTATGTTATAA.............................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGGCAGCATCAATGTCTTAAAG................................................................................................................ 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TAGCTTAGATTCTCTGTCTACAAACAAAA................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AGCATTGATTAAATGGAATCGCTTG..................................................................................................................................................................................................... 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCATCAATGTCTTAAAGCTATAATT........................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CCATTCCAAAAGCATTGATTAAATGGAA............................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TTCCAAAAGCATTGATTAAATGGAATCGC........................................................................................................................................................................................................ 29 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TAAAGGACCCATTGGAAACCA..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTAAAGCTATAATTTATGTTATAATCTT.......................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGTTTTTTTTGAAATGTCTATTTGGC..................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGCGTTCTTTTAGCTTAGAT.................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TATTTGGCGTTCTTTTAGCTTAGATTC.................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCTCTGTCTACAAACAAAATTTCTTGTT........ 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GGACCCATTGGAAACCCTTCCAAAAG............................................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TTCTTTTAGCTTAGATTCTCTGTC............................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TGGCAGCATCAATGTCTTAAAGCTA............................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGGTTTTTTTGAAATGTCTATTTGGC..................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TCCAAAAGCATTGATTAAATGGAATCGCT....................................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTGAAATGTCTATTTGGC..................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AAAAGCATTGATTAAATGGAATCGCT....................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTTGGCGTTCTTTTAGCTTAGATTCTC................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TTCTTTTAGCTTAGATTCTCTGTCTA.......................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TATATATTTTGGGTTTTTTTGAAATGT.............................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGCTTGTACTGGCAGCATCAATGTCT..................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TTTGAAATGTCTATTTGGCGTTCT................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTTTGGGTTTTTTTGAAATGTCTATTT........................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TAAAGGACCCATTGGAAACCATTCC................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TTCCAAAAGCATTGATTAAATGGA............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TCCAAAAGCATTGATTAAA................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TATTTGGCGTTCTTTTAGCTTAGATT................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GGAAACCATTCCAAAAGCATTGATTAAA................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TCGCTTGTACTGGCAGCATCAATGTCT..................................................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTCTATTTGGCGTTCTTTTAGCTTA....................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTGGGTTTTTTTGAAATGT.............................................................. 19 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GGCGATTTGGCGTTCTTTT............................................. 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GTAGATTTGGCGTTCTTTT............................................. 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................TGTTATAATCTTTTAAATTTTAT............................................................................... 23 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...AAGAACCAATTGGAATCCATT................................................................................................................................................................................................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................GATGAAATGGAACCGGTAT..................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...AAGAACCAATTGGAATCCAT.................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AATTTCCTGGGTAACCTTTGGTAAGGTTTTCGTAACTAATTTACCTTAGCCATTCAGTTTAAAGATTATTTTTAATTTATGCTGATTCGTGATTGGGAAAAATAACTGTCGAACATGACCGTCGTAGTTACAGAATTTCGATATTAAATACAATATTAGAAAATATATAAAACCAAAAAAAACTTTACAGATAAACCGCAAGAAAATCGAATCTAAGAGACAGATGTTTGTTTTAAAAAACAAAAAGTAAA
**************************************************......(((..((..........(((((((.(((.((((...........)))).))).)))))))................))..)))**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 M047
female body
 SRR060666
160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 M061
embryo
 SRR060672
9x160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060683
160_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060667
160_females_carcasses_total
 V116
male body		 M028
head
 SRR060674
9x140_ovaries_total
..TTTCCGGGGCAACCTTTAG...................................................................................................................................................................................................................................... 19 3 20 5.75 115 0 42 19 0 9 1 8 7 0 0 6 6 5 2 4 2 2 1 1
..........................................................................................................TGTGGAACATGACTGTCATAGT........................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ATGCTGGTACGTGATTGGG.......................................................................................................................................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTGTCGAACAGGACCGTCATAAT........................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTGTCGAACATGACTGTCATACT........................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTGTCGAACGGGACCGTCGTAAT........................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTGTCGACCAAGACCGTCATAGT........................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTTTCGAACAGGACCGTCATAGT........................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCGGATCTAAGAGACAGTT.......................... 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GCACGAAAATCGAAGCTAGGA................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.CTTTCCGGGGCAACCTTTGG...................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TGCTTCGCGATTGGCAAAAAT.................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAAGATGAACTGCAAGAAAATC........................................... 22 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTTCCGGGGCAACCTTTAGT..................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTTCCCGGGCAACCTTTAG...................................................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................ATAAACCGCAAGAAGACC........................................... 18 2 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:18010544-18010794 + dvi_20406 TTAAAGGACCCATTGGAAACCATTCCAAAAGCATTGATTAAATGGAATCGGTAA-------------------GTCAAATTTCTAAT-----AAAA---ATTAAATACGACTAAGCACTAACCCTTTTTATTGACAGCTTGTACTGGCAGCATCAATGTCTTAAAGCTATAATTTATGTTATAATCTTTTATATATTTTGGTTTTTTT-TGAAATGTCTATTTGGCGTTC-----------------------TTTTAGCTTAGATTCTCTGTCTACAAACAAAATTTTT----TGTTTTTCATTT
droMoj3 scaffold_6680:23555264-23555450 + TTAAAAGATCCATTGGAAACCATACCAAAAGCATTAGTTAAATGGAATCGGTAA-------------------AA-ATGTTTCTATT-----CACTTTTATGAGCTACCATGAAATATTAATATTATTCCTTCACAGTTTGTATTGGCAGCATCAAATCCTTAAAGCTATCATTTACTTAATTCTAATGATTATAGTCTGGACATTCT-TGAA---------------------------------------------------------------------------------------------
droGri2 scaffold_15110:24050652-24050917 + TTAAATGATCCATTGGACACTATACCAGAAGCGATGGTTAGATGGAATCGGTAA-------------------AT-ATATCTCTTTTTCGAACACTAT-GATAGATGGCATTAATCAGCAGTCATTTTTATTCTCAGATTATATTGGTTGCATCAGAGTCTTAAAGTGACAATTTTAATTATAACCCTTTACATACTTTGTGCTTTTTTCATGAACTTAAGTAAAGGTTAGCATGAAAAACAATCTTATGTGTTTTAAAGACAAACT-------------------ATTTAAAATTATTTTCTCTT
droWil2 scf2_1100000004902:5363930-5364160 - TGTAATGAGCCGCCAACTGCAAAGTCAATAGCATTGGGTCTAAAGGCACTTAAACGGTAACTAAAAATAACTAATCTAATAACTAAT-----CTAT---ACTCGACAAGTATATGA----AATATTGTTTCTTACAGATTTCACTTGTTACATCGACTTGTTCAGTTTGCAATTTGTTGTCTTACAATAAATATTCTCTGGCTGTTTG-CACACCATATAATTGAAGTCA-----------------------TTTAAAAACAAATT---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTAAAGGACCCATTGGAAACCATTCCAAAAGCATTGATTAAATGGAATCGGTAA-------------------GTCAAATTTCTAAT-----AAAA---ATTAAATACGACTAAGCACTAACCCTTTTTATTGACAGCTTGTACTGGCAGCATCAATGTCTTAAAGCTATAATTTATGTTATAATCTTTTATATATTTTGGTTTTTTT-TGAAATGTCTATTTGGCGTTC-----------------------TTTTAGCTTAGATTCTCTGTCTACAAACAAAATTTTT----TGTTTTTCATTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................TCCAAAAGCATTGATTAAATGGAATCGC...............................................................................................................................................................................................................................................................2819.009000000000000000000000000002101030010001000000000000000000000000
.TAAAGGACCCATTGGAAACCATTCCAA......................................................................................................................................................................................................................................................................................2718.008000000000000000000000000012101000000000000000010000000001100000
.TAAAGGACCCATTGGAAACCATTCCA.......................................................................................................................................................................................................................................................................................2614.004000000000000000000000000020010010000000000000000000000000000000
.TAAAGGACCCATTGGAAACCATTCCAAA.....................................................................................................................................................................................................................................................................................2813.003000000000000000000000000010010000000000000000010000000000000000
.................................................................................................................................................................................................................TGAAATGTCTATTTGGCGTTC-----------------------TTT..................................................2413.003000000000000000000000001100100000000000000000000000000000000000
.............................................................................................................................................................................................................................TTGGCGTTC-----------------------TTTTAGCTTAGATTCTCTG..................................2813.003001000000000000000000000001100000000000000000000000000000000000
...........................................................................................................................................TGTACTGGCAGCATCAATGTCTTAAAG............................................................................................................................................2712.002000000000000000000000000010000010000000000000000000000000000000
...............................................................................................................................................................................................................T-TGAAATGTCTATTTGGCGTT.............................................................................2112.002000000000020000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TAGATTCTCTGTCTACAAACAAAATT...................2612.002000000000000000000000000011000000000000000000000000000000000000
...........................................................................................................................................TGTACTGGCAGCATCAATGTCTTAAAGC...........................................................................................................................................2812.002000000000000000000000000011000000000000000000000000000000000000
..............................................................................................................................................................................................................................TGGCGTTC-----------------------TTTTAGCTTAGATTC......................................2312.002000000000000000000000000100100000000000000000000000000000000000
.TAAAGGACCCATTGGAAACCATTC.........................................................................................................................................................................................................................................................................................2412.002001000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................TGTCTATTTGGCGTTC-----------------------TTTTAGCTTAGAT........................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTTTAGCTTAGATTCTCTGTCTACAAAC.........................2811.001000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................TGACAGCTTGTACTGGCAGCATCAATG....................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.....GGACCCATTGGAAACCATTCCAAAAG...................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................................................................TTTTAGCTTAGATTCTCTGTCTACA............................2511.001001000000000000000000000000000000000000000000000000000000000000
......................TTCCAAAAGCATTGATTAAA........................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................TAACCCTTTTTATTGACAG.........................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................TGTACTGGCAGCATCAATGTCTTA...............................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
.TAAAGGACCCATTGGAAACCAT...........................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TCAATGTCTTAAAGCTATAATTTATGT...............................................................................................................................2711.001000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGAAATGTCTATTTGGCG...............................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................CTATTTGGCGTTC-----------------------TTTTAGCTTAGATTC......................................2811.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................TCAATGTCTTAAAGCTATAATTTATG................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TAGATTCTCTGTCTACAAACAAAAT....................2511.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................TTGGCGTTC-----------------------TTTTAGCTTAGATTCTC....................................2611.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................TTGGCGTTC-----------------------TTTTAGCTTAGATTCTCT...................................2711.001000010000000000000000000000000000000000000000000000000000000000
.............TGGAAACCATTCCAAAAGCATTGAT............................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
.....................ATTCCAAAAGCATTGATTAAA........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000100000000000000
............................................................................................................................................................................................................................................................................TCTGTCTACAAACAAAATTTTT----TGT.........2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGGCAGCATCAATGTCTTAAAGCTAT........................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
.TAAAGGACCCATTGGAAACCATTCCAAAA....................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................CTATTTGGCGTTC-----------------------TTTTAGCTTAGAT........................................2611.001000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................GTACTGGCAGCATCAATGTCTTAAA.............................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGAAATGTCTATTTGGCGTTC-----------------------TTTTAGC..............................................2811.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................GTCTTAAAGCTATAATTTATGTTATA...........................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................ACTGGCAGCATCAATGTCTTAAAGCTA.........................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................TGGCGTTC-----------------------TTTTAGCTTAGATTCTCTG..................................2711.001000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................TATGTTATAATCTTTTATATATTTTGGG........................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
..................ACCATTCCAAAAGCATTGATTAAAT.......................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................TTGGCGTTC-----------------------TTTTAGCTTAGAT........................................2211.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................T-TGAAATGTCTATTTGGCGTTC-----------------------TTTTAG...............................................2811.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................TGTCTTAAAGCTATAATTTATGTTATAA..........................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................TTGTACTGGCAGCATCAATGTCTTAAAG............................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAGCTTAGATTCTCTGTCTACAAACAAAA.....................2911.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................GCATCAATGTCTTAAAGCTATAATT....................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
...................CCATTCCAAAAGCATTGATTAAATGGAA...................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
......................TTCCAAAAGCATTGATTAAATGGAATCGC...............................................................................................................................................................................................................................................................2911.001000010000000000000000000000000000000000000000000000000000000000
.TAAAGGACCCATTGGAAACCA............................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................TTAAAGCTATAATTTATGTTATAATCTT......................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................TGGTTTTTTT-TGAAATGTCTATTTGGC................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TGGCGTTC-----------------------TTTTAGCTTAGAT........................................2111.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................TATTTGGCGTTC-----------------------TTTTAGCTTAGATTC......................................2711.001000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTC-----------------------TTTTAGCTTAGATTCTCTGTC................................2411.001000010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGGCAGCATCAATGTCTTAAAGCTA.........................................................................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................T-TGAAATGTCTATTTGGC................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................TTTGGCGTTC-----------------------TTTTAGCTTAGATTCTC....................................2711.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................TTC-----------------------TTTTAGCTTAGATTCTCTGTCTA..............................2611.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................TT-TGAAATGTCTATTTGGCGTTC-----------------------T....................................................2411.001000010000000000000000000000000000000000000000000000000000000000
.TAAAGGACCCATTGGAAACCATTCC........................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
......................TTCCAAAAGCATTGATTAAATGGA....................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
.......................TCCAAAAGCATTGATTAAA........................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................................................TATTTGGCGTTC-----------------------TTTTAGCTTAGATT.......................................2611.001000000000000000000000000000100000000000000000000000000000000000
..............GGAAACCATTCCAAAAGCATTGATTAAA........................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................TGTCTATTTGGCGTTC-----------------------TTTTAGCTTA...........................................2611.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
TTAAAAGATCCATTGGAAACCATACCAAAAGCATTAGTTAAATGGAATCGGTAA-------------------AA-ATGTTTCTATT-----CACTTTTATGAGCTACCATGAAATATTAATATTATTCCTTCACAGTTTGTATTGGCAGCATCAAATCCTTAAAGCTATCATTTACTTAATTCTAATGATTATAGTCTGGACATTCT-TGAA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........CCATTGGAAACCATACCAC......................................................................................................................................................................................................................................................................................19100.101000010
droGri2
TTAAATGATCCATTGGACACTATACCAGAAGCGATGGTTAGATGGAATCGGTAA-------------------AT-ATATCTCTTTTTCGAACACTAT-GATAGATGGCATTAATCAGCAGTCATTTTTATTCTCAGATTATATTGGTTGCATCAGAGTCTTAAAGTGACAATTTTAATTATAACCCTTTACATACTTTGTGCTTTTTTCATGAACTTAAGTAAAGGTTAGCATGAAAAACAATCTTATGTGTTTTAAAGACAAACT-------------------ATTTAAAATTATTTTCTCTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TGTAATGAGCCGCCAACTGCAAAGTCAATAGCATTGGGTCTAAAGGCACTTAAACGGTAACTAAAAATAACTAATCTAATAACTAAT-----CTAT---ACTCGACAAGTATATGA----AATATTGTTTCTTACAGATTTCACTTGTTACATCGACTTGTTCAGTTTGCAATTTGTTGTCTTACAATAAATATTCTCTGGCTGTTTG-CACACCATATAATTGAAGTCA-----------------------TTTAAAAACAAATT---------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................AGTCAATAGCATTGGGTCTAAAGGCACT................................................................................................................................................................................................................................................................2811.00101000
...............................CATTGGGTCTAAAGGCACTTAAACG..........................................................................................................................................................................................................................................................2511.00100001

Generated: 05/16/2015 at 11:48 PM