ID:

dvi_20042

 Coordinate:

scaffold_13049:15212551-15212690 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.5 -24.3 -24.3

Flybase annnotation

CDS [Dvir\GJ13609-cds]; exon [dvir_GLEANR_13488:2]; exon [dvir_GLEANR_13488:1]; CDS [Dvir\GJ13609-cds]; intron [Dvir\GJ13609-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAATGGAAGGATCAGGATCACTACAGTGTTCTCGGCCTTGGCAAATTGAGGTGCGTTTCTATTTAGCTTTCTGTGTGTGCGCGCGCGTGTGCGTGCTGCGTGTGTGTGTGTGTTGCGCCAGCAAGTGTGTGTGTGTGTGTGTGTATTTGTGCGTGTGCACGTGTATTAACTGCGCGTTTTTTACACACAGATACGAAGCCAGCGATGATGATATTCGGCGGGCCTACAGACGGATGGTGC
**************************************************...............((((.(((.((((((((((((((((((((...))))))))))))))).)))))))).)))).........********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060679
140x9_testes_total
 M061
embryo
 M047
female body
 SRR060670
9_testes_total
 SRR060655
9x160_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060689
160x9_testes_total
 SRR1106729
mixed whole adult body
 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 V053
head
 M028
head
 SRR060656
9x160_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR1106730
embryo_16-30h
 V116
male body		 SRR060661
160x9_0-2h_embryos_total
 SRR060673
9_ovaries_total
 SRR060671
9x160_males_carcasses_total
 SRR060683
160_testes_total
..................................................GTGCGTTTCTATTTAGCTTTCTGTG..................................................................................................................................................................... 25 0 1 17.00 17 8 3 2 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGCGTTTCTATTTAGCTTTCTGTGTG................................................................................................................................................................... 27 0 1 6.00 6 1 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGCGTTTCTATTTAGCTTTCTGTGT.................................................................................................................................................................... 26 0 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GAGATACGAAGCCAGCGAT.................................. 19 1 1 2.00 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGCGTTTCTATTTAGCTTTCTGT...................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACGAAGCCAGCGATGATG.............................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCGATGATGATATTCGGCGGGCCTAC............. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................TACAGTGTTCTCGGCCTT......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATCACTACAGTGTTCTCGGCCTT......................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGTTGCGCCAGCAAGTGTGTGTGTG......................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TACGAAGCCAGCGATGAT............................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CAGGATCACTACAGTGTT.................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCGATGATGATATTCGTCG.................... 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TCACTACAGTGTTCTCGGCCTTGG....................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGAAGCCAGCGATGATGATATTCGGC..................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GATGATATTCGGCGGGCCTACAGACGGAT..... 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ACAGTGTTCTCGGCCTTGA....................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................AGTGTTCTCGGCCTTGGC...................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCGATGATGATATTCGGCGG................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AGATACGAAGTCAGCGAAG................................. 19 2 3 1.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0
....................CTACAGTGTTCTCGGCCTTGGCA..................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGAGATACGAAGCCAGCGATGATGATA........................... 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGCGTTTCTATTTAGCTATCTGTGTG................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGAGATACGAAGCCAGCGAT.................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................CTACAGTGTTCTCGGCCTTGGCAAATTGAGATA........................................................................................................................................................................................... 33 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................GAGATACGAAGCCAGCGATGATGATATT......................... 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ACAGTGTTCTCGGCCTTGGCAAATTGA............................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................CTACAGTGTTCTCGGCCTTGGCAA.................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATTTAGCTTTCTGTGTGT.................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CTACAGTGTTCTCGGCCTT......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGCGTTTCTATTTAGCTTTCTGTTTG................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GTTTCTATTTAGCTTTCTGTGTG................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATGATGATGTTCGGCGGGCCT............... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCGATGATGATATTCGGCGGGC................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TCTCGGCCTTGGCAAATTGAGATA........................................................................................................................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACTACAGTGTTCTCGACCTTGGCA..................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TTCTCGGCCTTGGCAAATTGAGATA........................................................................................................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................CGAAGCCAGCGATGATGAT............................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGCGTTTATATTTAGCTTTCTGTGTG................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ATTGTTCTCGGCCTTGGC...................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTGCGTGTGCACGTGTAATAACTG.................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCGATGATGATATTCGGCG.................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGCGTTTCTATTTAGCTTTCTGTGTC................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GATCACTACAGTGTTCTC............................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGTTCTCGGCCTTGGCAAA................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TGTGTGTGTTGCGCCAGCAAGTG................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ACAGTGTTCTCGGCCTTGAC...................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CAGCGATGATGATATTCGGCGGGCCT............... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTGTTCTCGGCCTTGGCAAAT.................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................AGATACGAAGTCAGCGAAGTT............................... 21 3 6 0.33 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GATACGAAGTCAGCGAAGTT............................... 20 3 14 0.14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0
..........................TGTCCTCCGCCTTGGCAACTT................................................................................................................................................................................................. 21 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGTGTGTGTGTGTGTGTGTATT............................................................................................. 22 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................TGTGTTTGTATTTGTGCGTGT.................................................................................... 21 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................GAGTATTAACTGTGCGTT.............................................................. 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................CAAGCCAGCGATGATGATGCT......................... 21 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAAGATACGCAGCCAGCGAT.................................. 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTGTGCGTGTGCAAGGGTCT.......................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTTACCTTCCTAGTCCTAGTGATGTCACAAGAGCCGGAACCGTTTAACTCCACGCAAAGATAAATCGAAAGACACACACGCGCGCGCACACGCACGACGCACACACACACACAACGCGGTCGTTCACACACACACACACACACATAAACACGCACACGTGCACATAATTGACGCGCAAAAAATGTGTGTCTATGCTTCGGTCGCTACTACTATAAGCCGCCCGGATGTCTGCCTACCACG
*********************************************************************************************************...............((((.(((.((((((((((((((((((((...))))))))))))))).)))))))).)))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060670
9_testes_total
 SRR060679
140x9_testes_total
 M047
female body
..............................GCGCCGGCACCGTTTAACTCC............................................................................................................................................................................................. 21 2 1 1.00 1 0 1 0 0
........................TCACAAGAGCCGGAACCGTTT................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....CGCTCCTAGTTCTAGTGATGT....................................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0
....CGCTCCTAGTTCTAGTGATG........................................................................................................................................................................................................................ 20 3 3 0.33 1 0 0 1 0
.........................................................................ACACACGCGCGCGCACACGGA.................................................................................................................................................. 21 1 8 0.13 1 1 0 0 0
.................................................................................................................................ACACACACACACACATAAACA.......................................................................................... 21 0 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:15212501-15212740 + dvi_20042 GAATGGAAGGATCAGGATCACTACAGTGTTCTCGGCCTTGGCAAATTGAGGTGCGTT--------------------T--CTATTTAGCTTTCTGTGTGTGCGCGCGCGTGTGCGTGCTGCGTGTGTGTGTGTG-----TTG---CG-------------------------------------------------------------------------------CCAGCAAGTGT--------------------GTG---------------------------------------------------------------------------------------------TGTGTGTGTG-------------------------------TGTA--TTTGTGCGTGTGCACGTGTATTAACTGC---G-----CGT---TTT--------------------------------------------------------------------------TTACACA-------CAGATACGAAGCCAGCGATGATGATATTCGGCGGGCCTACAGACGGATGGTGC
droMoj3 scaffold_6680:21662713-21662946 - GAATGGAAGGATCAGGATCATTACAGCGTTCTTGGCCTTGGCAAATTAAGGTGCGTT--------------------T--------ATCTGTTAATGTGTGCAAACGTG-------------------------------------------------------------------------------------------------------------------TGTGGGTATGCGTTAGAGAGA--------------------GAGAA-AGGG-------------------------------------------------------------------------AGAG-AATGCGTGTG-------------------------------TGTG----TGACCGTGTGCACGTGTATTAACTGAAT-TAACT----------------------------------------------------TATTTTGCACA------------------C--ACATACA-------CAGATACGAAGCAAGCGATGATGACATTCGGAAGGCCTACAGACGAATGGTGC
droGri2 scaffold_15110:19615854-19616094 + GAGTGGAAGGATCAGGACCATTACAGCGTGCTCGGCCTTGGCAAATTGAGGTAAT-G----------------------------------------------------------------------------------CACCAACAACAAATTATATATATAAATCTATACTATATATCTTTGCCTCTCTCTCTCTCTTACTCTCTTTCTCTCTATGTGTG--T-GTTGCACGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAATGC---T-----CTT---TTT---------------------------T-----------T--TGTGATGAACA------------------C--CTACACA-------CAGATACGAGGCGAGCGATGATGACATACGGCGTGCCTACAGACGAATGGTCC
droWil2 scf2_1100000004830:113427-113709 - GAGTGGAAGGAGCAGGATCATTATAGTGTATTGGGATGTGGTAAATTGAGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTTTTGTTTTG----TGGAGCACGTGCTAGAACGATAGGA-AGAGCAAGAGACACAGACAGAGACATACACGCACATACGGCAGAGAATAAAAGAGACAAACGGAGACAAAGACAGAGAGAGCAA---------------------TTTGTATA--------TATATGTAT------------------------------A-------------T--------------------------------ATATA-TTCTATTCTCCCACT------------------G--GTTTTTG-------TAGATTTGAAGCCACTGATGACGATATACGCCGAGCCTACAGACGCATGGTGC
dp5 XR_group8:3916311-3916523 - dps_3288 GAATGGAAGGACCAAGACCACTACAGTGTCCTCGGTCTGGGCAAATTGAGGTAAGGCTCCCATCTTGGCCTGGCC----TTTGTTTGTCTGGCTG---------------------------TGTGTGTGTGTG--TG----------------------------------------------------------------------------------TCTG---------------------TTGAGCACGTGTCTGACTG------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------CGGAGTATGTGTTTGCGTCTTTTTC-----------------------------------------------TTTTTG-------CAGATTCGAAGCCAGCGATGATGACATTCGTCGCGCCTACAGACGCATGGTGC
droPer2 scaffold_29:147408-147628 - GAATGGAAGGACCAAGACCACTACAGTGTCCTCGGTCTGGGCAAATTGAGGTAAGCCTCCCATCTTGGCCTGGCCTCTCTTTGTTTGTCTGGCTGTGTG-----------------------TGTGTGTGTGTG--TG----------------------------------------------------------------------------------TCTG---------------------TTGAGCACGTGTCTGACTG------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------CGGAGTATGTGTTTGCGTCTTTTTC-----------------------------------------------TTTTTG-------CAGATTCGAAGCCAGCGATGATGACATTCGTCGCGCCTACAGACGCATGGTGC
droAna3 scaffold_13337:8566533-8566733 + dan_2506 GAGTGGAAAGACCAGGACCATTACAGCATTCTGGGCCTGGGAAAACTGAGGTGAGTG-----------------------------------------------------------------TGTGTGTGTGTG--TGGCAA---CA-------------------------------------------------------------------------------GCAGCACGTGT--------------------GTGACTA------------------------------------------------------------------------------------------------------------------ATGCAT--GGTATTTATTTTTAT------------------------------CGCTT------------------------------------CCTTTGT-GCAT-T--------CGATG------------------CATCCTCTTC-------CAGATTCGAGGCCAGCGACGATGATATCCGACGCTCCTACAGAAGAATGGTCC
droBip1 scf7180000396541:706765-706966 + GAGTGGAAAGACCAGGATCATTACAGCATTCTTGGCCTGGGAAAACTGAGGTAAGTG-----------------------------------------------------------------TGTGTGTGAGTGTGG-GTGG---TA-------------------------------------------------------------------------------GCAGCACGTGT--------------------GTGACTA------------------------------------------------------------------------------------------------------------------ATGCAT--GGTATTTATTTTTAT------------------------------CGCTT------------------------------------CCTTTGT-GCAT-T--------TAATG------------------CATCCTCTTT-------CAGATTCGAGGCCACCGACGATGATATACGACGCTCCTACAGACGAATGGTCC
droKik1 scf7180000302260:189774-189943 + GAGTGGAAGGACCAGGACCATTACAGCATTCTCGGTCTCGGAAAAATCAGGTGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGTGTG----------------------ACTA------------------------------------------------------------------------------------------------------------------A---------CTGTATTCTA------------------------------TGGG-----CAC---AATTAACGCCATAAC--------------------TATTC-GTGTCTCG-------------------------------CCGT-------TAGGTTCGAGGCCACCGAAGATGATATTCGACGGGCATACCGACGCATGGTCC
droFic1 scf7180000453929:283544-283729 - GAATGGAAGGACCAGGATCACTACGCCATTCTGGGTCTCGGAAAACTGAGGTGCGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACAGCACGTGGTTGCTGTC--------------------------------------------------------------------------------------------------------------------------------A------CTGCTA-CAAATTATTTG------------------------------TGGCTCT--------ACC--------------------------------TTATA-CTG-ATTTTGTGACT------------------A--ATCCATA-------CAGATACGAAGCAAGCGAGGATGATATTCGACGGGCATACAGACGCATGGTCC
droEle1 scf7180000491193:2222988-2223179 + GAGTGGAAGGACCAGGATCACTACGCCATTCTGGGTCTGGGCAAGCTCAGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCAGCACGTGTTTGG--------------------C------------------------------------------------------------------------------------------------------------------CTAGTTTTAAGTCATTTATTTA------------------------------TAACCTTTCGCT---ATG--------------------------------TAACA-CTT-GATTTAAAATT------------------C--ATTCAAT-------CAGGTACGAGGCCAGCGACGATGACATTCGACGGGCCTATAGACGCATGGTCC
droRho1 scf7180000779731:35374-35548 - GAGTGGAAGGATCAGGATCACTACGCCATTCTTGGCTTAGGCAAGCTCAGGCGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTACCACGTGTTTGCC--------------------------------------------------------------------------------------------------------------------------------------CTAGTTTT--GGTCTTTATTTATAA------------------------------CACCT----------------------------------------------------CATTTGAAATG------------------C--ATCTCAA-------CAGATACGAGGCCAGCGACGACGACATTCGACGTGCTTATAGACGCATGGTCC
droBia1 scf7180000302193:4905151-4905355 + GAGTGGAAGGATCAGGACCACTACGCCATTCTAGGTCTCGGCAAAATCCGGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAAGCACGTGTTAGCCAAC---------------------------------------------------------------------------------------------------------------CCCCATATGCA----------AAGTTTCCA-TCG---TTCGA------------------------------TTGATCATTCCGTATTAC--------------------------------TAATT-GTGTACTTCTAAATC------------------C--AACCCTA-------TAGTTACGAGGCCAGCGAGGATGACATTCGACGGGCATACAGGCGCATGGTCC
droTak1 scf7180000415319:217974-218191 - GAGTGGAAGGACCAGGACCACTACGCCATTCTGGGTCTGGGCAAAATCCGGTGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGAGCACGTGTTAGTCATG--------------------CAGAACATAC-------------------------------------------------------------------------AGAT-ATTCCCCATGTGCTA-----GTT--AG--TCTA-TTGATT---------------------------------------------------AC--------------------------------TAATA-AT--------AAATC----CTTTATTTTTTTAAA--ACCCTTTTATCCAACAGTTACGAGGCCAGCGAGGATGATATTCGTCGGGCCTACAGACGCATGGTCC
droEug1 scf7180000409711:4866394-4866604 + GAATGGAAGGACCAGGATCACTACGCCATTCTTGGTTTAGGCAAACTCCGGTGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GCAGCACGTGTTAGTCATC----------------------------------------------------------------------------------------------------------------CACATGTGTTTGTGTG---TTAGTTTGTA-TAATTAATTCA------------------------------TGACTTTTTGCG---AAT--------------------------------TAATG-GCATATAATATTAACT-----------------A--ACCCTTT-------TAGGTACGAGGCAAGCGAGGATGACATTCGACGGGCTTATAGACGCATGGTCC
dm3 chr3L:21128560-21128767 - GAGTGGAAGGACCAGGATCATTACGCCGTTCTTGGCTTGGGCAAGCTCCGGTTAGTG----------------------------------------------------------------------------------CGA---CG-------------------------------------------------------------------------------GCAGCACGTGGTGTTC-TT----------------------------------------------------------------------------------------------------------------CCCATGTGTTC-----G------TTTCTA-TCAATATTTAA------------------------------TGGGACTTCCCC---AAC--------------------------------TAATA-CTGTATTGTCTGACTAAAT-----------------CACCCTT-------TAGATACGAGGCCAGCGAGGATGATGTTCGACGGGCTTACAGGCGCATGGTTC
droSim2 3l:20682340-20682548 - GAGTGGAAGGACCAGGATCACTACGCCATTCTTGGCTTGGGCAAGCTCCGGTTAGTG----------------------------------------------------------------------------------CGG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCATT----------------------------------------------------------------------------------------------------------------CCCATGTGTTC-----G------TTTCTA-TCAACAATCGA------------------------------TGGGACTTCCCC---AAC--------------------------------TAATA-CTGTATTGTCTCACCGAAT-----------------TACCCTT-------TAGATACGAGGCCAGCGAGGATGATATTCGACGGGCTTACAGGCGCATGGTCC
droSec2 scaffold_11:1086625-1086833 - GAGTGGAAGGACCAGGATCACTACGCCATTCTTGGCTTGGGCAAGCTCCGGTTAGTG----------------------------------------------------------------------------------CGG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCATT----------------------------------------------------------------------------------------------------------------CCCATGTGTTC-----G------TTTCTA-TCAACAATCGA------------------------------TGGGACTTCCCC---AAC--------------------------------TAATT-CTGTATTGTCTGACCAAAT-----------------TACCCTT-------TAGATACGAGGCCAGCGAGGATGATATTCGACGGGCTTACAGGCGCATGGTCC
droYak3 3L:19394716-19394926 + GAATGGAAGGACCAGGATCACTACGCCATTCTTGGTCTGGGCAAGCTTCGGTAAGTG----------------------------------------------------------------------------------CTG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCATT----------------------------------------------------------------------------------------------------------------TCCATGTGCTCG--GC---TCAGTTTCTA-TCAATAATTTA------------------------------TTGCGCT-CCCC---AAC--------------------------------TAATA-TTGTGTTGTCGGATC------------------A--TTCCCTT-------TAGATACGAGGCCAGCGAGGATGACATTCGACGGGCTTATAGACGCATGGTCC
droEre2 scaffold_4784:20817925-20818135 - GAGTGGAAGGACCAGGATCACTACGCCATTCTTGGCCTGGGCAAGCTCCGGTGAGTG----------------------------------------------------------------------------------CGG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCGTT----------------------------------------------------------------------------------------------------------------TCCATGTGTTCG--GC---TCAGTTCCTA-TCAATAATTGA------------------------------CGGCC-TTCCCC---AAC--------------------------------TAATA-CTGTGTTGTCGGTTC------------------A--ATCCCTT-------TAGATACGAAGCCAGCGAGGATGACATTCGACGGGCTTATAGACGCATGGTCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GAATGGAAGGATCAGGATCACTACAGTGTTCTCGGCCTTGGCAAATTGAGGTGCGTT--------------------T--CTATTTAGCTTTCTGTGTGTGCGCGCGCGTGTGCGTGCTGCGTGTGTGTGTGTG-----TTG---CG-------------------------------------------------------------------------------CCAGCAAGTGT--------------------GTG---------------------------------------------------------------------------------------------TGTGTGTGTG-------------------------------TGTA--TTTGTGCGTGTGCACGTGTATTAACTGC---G-----CGT---TTT--------------------------------------------------------------------------TTACACA-------CAGATACGAAGCCAGCGATGATGATATTCGGCGGGCCTACAGACGGATGGTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................GTGCGTT--------------------T--CTATTTAGCTTTCTGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25117.0017000001000000000000000000000081230000000200000000000000000000000
..................................................GTGCGTT--------------------T--CTATTTAGCTTTCTGTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.006000000000000000000000000000014010000000000000000000000000000000
..................................................GTGCGTT--------------------T--CTATTTAGCTTTCTGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004000000000000000000000000000000130000000000000000000000000000000
..................................................GTGCGTT--------------------T--CTATTTAGCTTTCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000020000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGCCAGCGATGATG..............................1811.001000001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGATGATATTCGGCGGGCCTAC.............2611.001010000000000000000000000000000000000000000000000000000000000000
.....................TACAGTGTTCTCGGCCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
................ATCACTACAGTGTTCTCGGCCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TG-----TTG---CG-------------------------------------------------------------------------------CCAGCAAGTGT--------------------GTG---------------------------------------------------------------------------------------------TGTG......................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAGCCAGCGATGAT...............................1811.001000000000000001000000000000000000000000000000000000000000000000
............CAGGATCACTACAGTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.................TCACTACAGTGTTCTCGGCCTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCCAGCGATGATGATATTCGGC.....................2611.001000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATATTCGGCGGGCCTACAGACGGAT.....2911.001000100000000000000000000000000000000000000000000000000000000000
......................ACAGTGTTCTCGGCCTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
........................AGTGTTCTCGGCCTTGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGATGATATTCGGCGG...................2011.001000000000000000000000000000000000010000000000000000000000000000
....................CTACAGTGTTCTCGGCCTTGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000100000
......................ACAGTGTTCTCGGCCTTGGCAAATTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000100000000000000000000000000000000000000000000000000000000
....................CTACAGTGTTCTCGGCCTTGGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................TATTTAGCTTTCTGTGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
....................CTACAGTGTTCTCGGCCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
......................................................GTT--------------------T--CTATTTAGCTTTCTGTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGATGATATTCGGCGGGC.................2211.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCCAGCGATGATGAT............................1911.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGATGATATTCGGCG....................1911.001000000000000000000001000000000000000000000000000000000000000000
..................................................GTGCGTT--------------------T--CTATTTAGCTTTCTGTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
...............GATCACTACAGTGTTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000100000000000000000000000000000000
..........................TGTTCTCGGCCTTGGCAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................TGTGTGTG-----TTG---CG-------------------------------------------------------------------------------CCAGCAAGTG...............................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGATGATGATATTCGGCGGGCCT...............2611.001000000000000000000000000000000000000000000000000000000000100000
.........................GTGTTCTCGGCCTTGGCAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGT--------------------GTG---------------------------------------------------------------------------------------------TGTGTGTGTG-------------------------------TGTA--TT.........................................................................................................................................................................................22200.102000000000000000000000000000000000000000000000000000000000000020
droMoj3
GAATGGAAGGATCAGGATCATTACAGCGTTCTTGGCCTTGGCAAATTAAGGTGCGTT--------------------T--------ATCTGTTAATGTGTGCAAACGTG-------------------------------------------------------------------------------------------------------------------TGTGGGTATGCGTTAGAGAGA--------------------GAGAA-AGGG-------------------------------------------------------------------------AGAG-AATGCGTGTG-------------------------------TGTG----TGACCGTGTGCACGTGTATTAACTGAAT-TAACT----------------------------------------------------TATTTTGCACA------------------C--ACATACA-------CAGATACGAAGCAAGCGATGATGACATTCGGAAGGCCTACAGACGAATGGTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGAAGGCCTACAGACGAATGGT..2611.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATACGAAGCAAGCGATGATGAC............................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................G-AATGCGTGTG-------------------------------TGTG----TGACCG...................................................................................................................................................................................2111.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACGTGTATTAACTGAA..............................................................................................................................................................2011.001010000
..ATGGAAGGATCAGGATCATTACAGCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCACA------------------C--ACATACA-------CAGT.................................................2140.251000100
droGri2
GAGTGGAAGGATCAGGACCATTACAGCGTGCTCGGCCTTGGCAAATTGAGGTAAT-G----------------------------------------------------------------------------------CACCAACAACAAATTATATATATAAATCTATACTATATATCTTTGCCTCTCTCTCTCTCTTACTCTCTTTCTCTCTATGTGTG--T-GTTGCACGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAATGC---T-----CTT---TTT---------------------------T-----------T--TGTGATGAACA------------------C--CTACACA-------CAGATACGAGGCGAGCGATGATGACATACGGCGTGCCTACAGACGAATGGTCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................GCGTGCTCGGCCTTGGCAAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
droWil2
GAGTGGAAGGAGCAGGATCATTATAGTGTATTGGGATGTGGTAAATTGAGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTTTTGTTTTG----TGGAGCACGTGCTAGAACGATAGGA-AGAGCAAGAGACACAGACAGAGACATACACGCACATACGGCAGAGAATAAAAGAGACAAACGGAGACAAAGACAGAGAGAGCAA---------------------TTTGTATA--------TATATGTAT------------------------------A-------------T--------------------------------ATATA-TTCTATTCTCCCACT------------------G--GTTTTTG-------TAGATTTGAAGCCACTGATGACGATATACGCCGAGCCTACAGACGCATGGTGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................ATAGTGTATTGGGATGTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCACTGATGACGATATACGC......................2311.00100010
......................ATAGTGTATTGGGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...................ATTATAGTGTATTGGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................CATTATAGTGTATTGGGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCACTGATGACGATA...........................1911.00100010
...............GATCATTATAGTGTATTGGGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..................CATTATAGTGTATTGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCCACTGATGACGATATACGCC.....................2611.00100010
.............AGGATCATTATAGTGTATTGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAAGCCACTGATGA................................1811.00101000
...................ATTATAGTGTATTGGGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGATGACGATATACGCCGAGC.................2611.00101000
..............................TTGGGATGTGGTAAATTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCACTGATGACGAT............................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATGACGATATACGCCGAGC.................2311.00100010
.................TCATTATAGTGTATTGGGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCCTACAGACGCATGGTG.2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................AA---------------------TTTGTATA--------TATATGTAT------------------------------............................................................................................................................................................1930.33100010
dp5
GAATGGAAGGACCAAGACCACTACAGTGTCCTCGGTCTGGGCAAATTGAGGTAAGGCTCCCATCTTGGCCTGGCC----TTTGTTTGTCTGGCTG---------------------------TGTGTGTGTGTG--TG----------------------------------------------------------------------------------TCTG---------------------TTGAGCACGTGTCTGACTG------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------CGGAGTATGTGTTTGCGTCTTTTTC-----------------------------------------------TTTTTG-------CAGATTCGAAGCCAGCGATGATGACATTCGTCGCGCCTACAGACGCATGGTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGTCGCGCCTACAGACGC.......2212.0020200000000
.AATGGAAGGACCAAGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................CTCGGTCTGGGCAAATTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.................CCACTACAGTGTCCTCGGTCTGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGACATTCGTCGCGC.................2011.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGCCAGCGATGATGACATT.........................2311.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACATTCGTCGCGCCTACAGACGCAT.....2811.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGCCTACAGACGCATGGTG.2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCTACAGACGCATGGTG.2011.0010100000000
..........................................................................................................................TGTGTGTGTGTG--TG----------------------------------------------------------------------------------TCTG---------------------TT....................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
GAATGGAAGGACCAAGACCACTACAGTGTCCTCGGTCTGGGCAAATTGAGGTAAGCCTCCCATCTTGGCCTGGCCTCTCTTTGTTTGTCTGGCTGTGTG-----------------------TGTGTGTGTGTG--TG----------------------------------------------------------------------------------TCTG---------------------TTGAGCACGTGTCTGACTG------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------CGGAGTATGTGTTTGCGTCTTTTTC-----------------------------------------------TTTTTG-------CAGATTCGAAGCCAGCGATGATGACATTCGTCGCGCCTACAGACGCATGGTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................AGTGTCCTCGGTCTGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACATTCGTCGCGCCTACAGACGCAT.....2812.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCGATGATGACATTC........................2011.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTCGCGCCTACAGACGCAT.....2311.001100000
.......................CAGTGTCCTCGGTCTGGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCAGCGATGATGAC............................1811.001001000
..............................CTCGGTCTGGGCAAATTGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................CTCGGTCTGGGCAAATTGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................GTCCTCGGTCTGGGCAAATTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
......................ACAGTGTCCTCGGTCTGGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATGATGACATTCGT......................1811.001000010
droAna3
GAGTGGAAAGACCAGGACCATTACAGCATTCTGGGCCTGGGAAAACTGAGGTGAGTG-----------------------------------------------------------------TGTGTGTGTGTG--TGGCAA---CA-------------------------------------------------------------------------------GCAGCACGTGT--------------------GTGACTA------------------------------------------------------------------------------------------------------------------ATGCAT--GGTATTTATTTTTAT------------------------------CGCTT------------------------------------CCTTTGT-GCAT-T--------CGATG------------------CATCCTCTTC-------CAGATTCGAGGCCAGCGACGATGATATCCGACGCTCCTACAGAAGAATGGTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACGATGATATCCGACGCTCCT...............2411.001100000
.....GAAAGACCAGGACCATTACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGATGATATCCGACGCT..................1911.001010000
.....................TACAGCATTCTGGGCCTGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................ACAGCATTCTGGGCCTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................AGCATTCTGGGCCTGGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...............GACCATTACAGCATTCTGGGCCTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............................TTCTGGGCCTGGGAAAACTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
GAGTGGAAAGACCAGGATCATTACAGCATTCTTGGCCTGGGAAAACTGAGGTAAGTG-----------------------------------------------------------------TGTGTGTGAGTGTGG-GTGG---TA-------------------------------------------------------------------------------GCAGCACGTGT--------------------GTGACTA------------------------------------------------------------------------------------------------------------------ATGCAT--GGTATTTATTTTTAT------------------------------CGCTT------------------------------------CCTTTGT-GCAT-T--------TAATG------------------CATCCTCTTT-------CAGATTCGAGGCCACCGACGATGATATACGACGCTCCTACAGACGAATGGTCCSizeHit CountTotal NormTotal
No Reads
droKik1
GAGTGGAAGGACCAGGACCATTACAGCATTCTCGGTCTCGGAAAAATCAGGTGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGTGTG----------------------ACTA------------------------------------------------------------------------------------------------------------------A---------CTGTATTCTA------------------------------TGGG-----CAC---AATTAACGCCATAAC--------------------TATTC-GTGTCTCG-------------------------------CCGT-------TAGGTTCGAGGCCACCGAAGATGATATTCGACGGGCATACCGACGCATGGTCCSizeHit CountTotal NormTotal
No Reads
droFic1
GAATGGAAGGACCAGGATCACTACGCCATTCTGGGTCTCGGAAAACTGAGGTGCGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACAGCACGTGGTTGCTGTC--------------------------------------------------------------------------------------------------------------------------------A------CTGCTA-CAAATTATTTG------------------------------TGGCTCT--------ACC--------------------------------TTATA-CTG-ATTTTGTGACT------------------A--ATCCATA-------CAGATACGAAGCAAGCGAGGATGATATTCGACGGGCATACAGACGCATGGTCCSizeHit CountTotal NormTotal
No Reads
droEle1
GAGTGGAAGGACCAGGATCACTACGCCATTCTGGGTCTGGGCAAGCTCAGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCAGCACGTGTTTGG--------------------C------------------------------------------------------------------------------------------------------------------CTAGTTTTAAGTCATTTATTTA------------------------------TAACCTTTCGCT---ATG--------------------------------TAACA-CTT-GATTTAAAATT------------------C--ATTCAAT-------CAGGTACGAGGCCAGCGACGATGACATTCGACGGGCCTATAGACGCATGGTCCSizeHit CountTotal NormTotal
No Reads
droRho1
GAGTGGAAGGATCAGGATCACTACGCCATTCTTGGCTTAGGCAAGCTCAGGCGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTACCACGTGTTTGCC--------------------------------------------------------------------------------------------------------------------------------------CTAGTTTT--GGTCTTTATTTATAA------------------------------CACCT----------------------------------------------------CATTTGAAATG------------------C--ATCTCAA-------CAGATACGAGGCCAGCGACGACGACATTCGACGTGCTTATAGACGCATGGTCCSizeHit CountTotal NormTotal
No Reads
droBia1
GAGTGGAAGGATCAGGACCACTACGCCATTCTAGGTCTCGGCAAAATCCGGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAAGCACGTGTTAGCCAAC---------------------------------------------------------------------------------------------------------------CCCCATATGCA----------AAGTTTCCA-TCG---TTCGA------------------------------TTGATCATTCCGTATTAC--------------------------------TAATT-GTGTACTTCTAAATC------------------C--AACCCTA-------TAGTTACGAGGCCAGCGAGGATGACATTCGACGGGCATACAGGCGCATGGTCCSizeHit CountTotal NormTotal
No Reads
droTak1
GAGTGGAAGGACCAGGACCACTACGCCATTCTGGGTCTGGGCAAAATCCGGTGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGAGCACGTGTTAGTCATG--------------------CAGAACATAC-------------------------------------------------------------------------AGAT-ATTCCCCATGTGCTA-----GTT--AG--TCTA-TTGATT---------------------------------------------------AC--------------------------------TAATA-AT--------AAATC----CTTTATTTTTTTAAA--ACCCTTTTATCCAACAGTTACGAGGCCAGCGAGGATGATATTCGTCGGGCCTACAGACGCATGGTCCSizeHit CountTotal NormTotal
No Reads
droEug1
GAATGGAAGGACCAGGATCACTACGCCATTCTTGGTTTAGGCAAACTCCGGTGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GCAGCACGTGTTAGTCATC----------------------------------------------------------------------------------------------------------------CACATGTGTTTGTGTG---TTAGTTTGTA-TAATTAATTCA------------------------------TGACTTTTTGCG---AAT--------------------------------TAATG-GCATATAATATTAACT-----------------A--ACCCTTT-------TAGGTACGAGGCAAGCGAGGATGACATTCGACGGGCTTATAGACGCATGGTCCSizeHit CountTotal NormTotal
No Reads
dm3
GAGTGGAAGGACCAGGATCATTACGCCGTTCTTGGCTTGGGCAAGCTCCGGTTAGTG----------------------------------------------------------------------------------CGA---CG-------------------------------------------------------------------------------GCAGCACGTGGTGTTC-TT----------------------------------------------------------------------------------------------------------------CCCATGTGTTC-----G------TTTCTA-TCAATATTTAA------------------------------TGGGACTTCCCC---AAC--------------------------------TAATA-CTGTATTGTCTGACTAAAT-----------------CACCCTT-------TAGATACGAGGCCAGCGAGGATGATGTTCGACGGGCTTACAGGCGCATGGTTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGCGAGGATGATGTTCGAC.....................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TACGCCGTTCTTGGCTTGGGCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGGATGATGTTCGACGGGCTTAC.............2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGCGAGGATGATGTT.........................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCGACGGGCTTAC.............1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATGATGTTCGACGGGC.................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGCCAGCGAGGATG..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000
......................ACGCCGTTCTTGGCTTGGGCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTTCGACGGGCTTACAGGCGC.......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGGCCAGCGAGGATGATGTTC........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGGGCTTACAGGCGCATGGTT.2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCGACGGGCTTACAGGCGC.......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGAGGATGATGTTCGACGGGC.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGAAGGACCAGGATCATTACGCCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATGTTCGACGGGC.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GGACCAGGATCATTACGCCGTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATTACGCCGTTCTTGGCTTGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGAGGCCAGCGAGGATGATG...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................ATTACGCCGTTCTTGGCTTGGGCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGACGGGCTTACAGGCGCATGG...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGATGATGTTCGACG....................1911.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTTCTTGGCTTGGGCAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCGACGGGCTTACAGGCGCA......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACGCCGTTCTTGGCTTGGGCAAGCTCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAGCGAGGATGATG...........................1811.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CGTGGTGTTC-TT----------------------------------------------------------------------------------------------------------------CCCATGTGT.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGAAGGACCAGGATCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TAGATACGAGGCCAGCGAGGATGA.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.......................CGCCGTTCTTGGCTTGGGCAAGCTCCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCAGCGAGGATGAT............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................CCGGTTAGTG----------------------------------------------------------------------------------CGA---CG-------------------------------------------------------------------------------GCAGCA...................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATGATGTTCGACGGGCTTAC.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGTTCTTGGCTTGGGCAAGCTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGATGATGTTCGACGGGC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGATGATGTTCGACGGGCTTAC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAGCGAGGATGATGTT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGCGAGGATGATGTTC........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGCCAGCGAGGATGATGTT.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGACGGGCTTACAGGCG........2011.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CTCCGGTTAGTG----------------------------------------------------------------------------------CGA---CG-------------------------------------------------------------------------------G........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAGGCCAGCGAGGATGATGT..........................2411.0010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGCCAGCGAGGATGATGTTC........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................GTTAGTG----------------------------------------------------------------------------------CGA---CG-------------------------------------------------------------------------------GCAGCACGTGGTGT...........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTTCGACGGGCT................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTACGCCGTTCTTGGCTTGGGCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCCAGCGAGGATGATG...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................CATTACGCCGTTCTTGGCTTGGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
GAGTGGAAGGACCAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAGCGAGGATGATGTTC........................2111.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTACGCCGTTCTTGGCTTGGGCAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATGTTCGACGGG..................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCGACGGGCTTACA............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGATGATGTTCGACGGG..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACGGGCTTACAGGCGCATGG...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGGGCTTACAGGCGCATGGT..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCTTGGCTTGGGCAAGCTCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCAGCGAGGATGATGTT.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGACGGGCTTACAG...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGACTAAAT-----------------CACCCTT-------TAG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGGCTTACAGGCGCATGGTTC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAGTGGAAGGACCAGGATCACTACGCCATTCTTGGCTTGGGCAAGCTCCGGTTAGTG----------------------------------------------------------------------------------CGG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCATT----------------------------------------------------------------------------------------------------------------CCCATGTGTTC-----G------TTTCTA-TCAACAATCGA------------------------------TGGGACTTCCCC---AAC--------------------------------TAATA-CTGTATTGTCTCACCGAAT-----------------TACCCTT-------TAGATACGAGGCCAGCGAGGATGATATTCGACGGGCTTACAGGCGCATGGTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........GGACCAGGATCACTACGCCATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATGATATTCGACGGGCG................2111.00100100000000000000
..GTGGAAGGACCAGGATCACTACGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTT-------TAGATACGAGGCCAGCG....................................2311.00100000000001000000
..............................CTTGGCTTGGGCAAGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
droSec2
GAGTGGAAGGACCAGGATCACTACGCCATTCTTGGCTTGGGCAAGCTCCGGTTAGTG----------------------------------------------------------------------------------CGG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCATT----------------------------------------------------------------------------------------------------------------CCCATGTGTTC-----G------TTTCTA-TCAACAATCGA------------------------------TGGGACTTCCCC---AAC--------------------------------TAATT-CTGTATTGTCTGACCAAAT-----------------TACCCTT-------TAGATACGAGGCCAGCGAGGATGATATTCGACGGGCTTACAGGCGCATGGTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGCGAGGATGATATTCGACGG...................2511.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGAGGCCAGCGAGGA................................1911.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCGAGGATGATATTCGACGGGC.................2511.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGATGATATTCGACGG...................1911.0010010
droYak3
GAATGGAAGGACCAGGATCACTACGCCATTCTTGGTCTGGGCAAGCTTCGGTAAGTG----------------------------------------------------------------------------------CTG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCATT----------------------------------------------------------------------------------------------------------------TCCATGTGCTCG--GC---TCAGTTTCTA-TCAATAATTTA------------------------------TTGCGCT-CCCC---AAC--------------------------------TAATA-TTGTGTTGTCGGATC------------------A--TTCCCTT-------TAGATACGAGGCCAGCGAGGATGACATTCGACGGGCTTATAGACGCATGGTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....GAAGGACCAGGATCACTACGCCATTCTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2925.0010000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGCGAGGATGACATTCGACG....................2420.50100010000000
..........................CATTCTTGGTCTGGGCAAGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100100000000
.....GAAGGACCAGGATCACTACGCCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACGGGCTTATAGACGCAT.....2220.50100000010000
...........................ATTCTTGGTCTGGGCAAGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGATGACATTCGACGGGC.................2220.50100000100000
droEre2
GAGTGGAAGGACCAGGATCACTACGCCATTCTTGGCCTGGGCAAGCTCCGGTGAGTG----------------------------------------------------------------------------------CGG---CG-------------------------------------------------------------------------------GCAGCACGTGGTGGTCGTT----------------------------------------------------------------------------------------------------------------TCCATGTGTTCG--GC---TCAGTTCCTA-TCAATAATTGA------------------------------CGGCC-TTCCCC---AAC--------------------------------TAATA-CTGTGTTGTCGGTTC------------------A--ATCCCTT-------TAGATACGAAGCCAGCGAGGATGACATTCGACGGGCTTATAGACGCATGGTCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGATGACATTCGACGGGCT................2311.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CTGTGTTGTCGGTTC------------------A--ATCCCTT-------TAG..................................................2711.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGACGGGCTTATAGAC.........1911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCAGCGAGGATGACA...........................1911.0010000100

Generated: 05/21/2015 at 03:53 PM