ID:

dvi_2004

 Coordinate:

scaffold_12726:2184840-2184990 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.6 -26.4 -26.2 -26.0

Flybase annnotation

exon [dvir_GLEANR_15522:3]; CDS [Dvir\GJ15197-cds]; intron [Dvir\GJ15197-in]

Repeatable elements

NameClassFamilyStrand
(CAGT)nSimple_repeatSimple_repeat+
mature
  1. scaffold_12726:796788-796806 -
  2. dvi_2004  scaffold_12726:2184918-2184936 -
  3. scaffold_12822:542531-542549 +
  4. scaffold_12823:1287525-1287543 -
  5. scaffold_12823:2226850-2226868 -
  6. scaffold_12855:3550832-3550850 -
  7. scaffold_12875:13335061-13335079 -
  8. scaffold_12875:20285038-20285056 +
  9. scaffold_12928:4859090-4859108 -
  10. scaffold_12928:6284289-6284307 -
  11. dvi_9232  scaffold_12928:7246954-7246972 +
  12. scaffold_12963:2525212-2525230 +
  13. scaffold_12963:11102681-11102699 +
  14. scaffold_12970:1202228-1202246 -
  15. dvi_12960  scaffold_12970:2572611-2572629 -
  16. scaffold_13042:3253252-3253270 -
  17. scaffold_13047:641491-641509 -
  18. scaffold_13047:3890115-3890133 -
  19. scaffold_13049:1926297-1926315 -
  20. scaffold_13049:23906686-23906704 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCCCACCACTCGAGTAGATGTATCCGAGCAGGAGCGACCAGCTGTGCGAGGTGAGTAAGTAGGATGATTTACCGACTGACTAACCGATTGACTAACTGACTGACTGACCGACTGACTGACTGACTGACGGACTGACTGACTAATCTGACGGAATCTTGTCTGCACGGTTAGATGGGGTTTTATTTCATTTGCAACTGTGGAAAATTGTTGGAAAATATTTGGTTAAAACCTTTTGGTCGATACTTTTAATA
**************************************************.................(((((....((......(((.(((......((((..(((((((...(((.......(((.((((.((......)).)))).)))......)))....)))))))....)))).....))).)))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 V053
head
 SRR060669
160x9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060657
140_testes_total
 M028
head
 SRR060682
9x140_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR060663
160_0-2h_embryos_total
............................................................................................................................................................TGACTGCAAGGTTTGATGGGGTT........................................................................ 23 3 1 2.00 2 2 0 0 0 0 0 0 0 0
...................GTATCCGAACAGGAACGACCA................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................ATTGTGGGAAACTATTTGGTT........................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.............GTAGATGTATCCGAGCAGGA.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................GGCGCGACCAGCAGTGGGAGG........................................................................................................................................................................................................ 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TGGCTGCGCGGTGAGATGGGG.......................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................TGGCTGAGCGGTTAGATGGGG.......................................................................... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................TGGCTGCTCGGTTAGATGG............................................................................ 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................TGGCAGCACGGTTAGCTGGG........................................................................... 20 3 8 0.25 2 0 2 0 0 0 0 0 0 0
..........................................................GTAGGATAGTTTACCGACTT............................................................................................................................................................................. 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TGGATGCACGGTTAGCTGGG........................................................................... 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0
.............................ATGAGCGACCAGCCGTGC............................................................................................................................................................................................................ 18 2 9 0.11 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................GTTGGAAAGTATTTGGGT........................... 18 2 17 0.06 1 0 0 0 0 0 0 1 0 0
..............................................................................................TCTGACTGACTGACCAACTGACTGAC................................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 0 1 0
........................................................................................................TGACCGACTGACTGACTGA................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................GTGGGAAACTATTTGGTT........................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1
.........................................................................................................GACCGACTGACTGACTGACTGAA........................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 1 0 0 0
..........................................TGGGCGCGGTGAGTACGTA.............................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGGGTGGTGAGCTCATCTACATAGGCTCGTCCTCGCTGGTCGACACGCTCCACTCATTCATCCTACTAAATGGCTGACTGATTGGCTAACTGATTGACTGACTGACTGGCTGACTGACTGACTGACTGCCTGACTGACTGATTAGACTGCCTTAGAACAGACGTGCCAATCTACCCCAAAATAAAGTAAACGTTGACACCTTTTAACAACCTTTTATAAACCAATTTTGGAAAACCAGCTATGAAAATTAT
**************************************************.................(((((....((......(((.(((......((((..(((((((...(((.......(((.((((.((......)).)))).)))......)))....)))))))....)))).....))).)))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060683
160_testes_total
 M047
female body
 SRR060670
9_testes_total
 V047
embryo
 V116
male body		 GSM1528803
follicle cells		 SRR060679
140x9_testes_total
 SRR060678
9x140_testes_total
 SRR060667
160_females_carcasses_total
........................................................................................ACTGATTGACTGACTGACTGGCT............................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................ACGGCCTTAGAATAGACGT....................................................................................... 19 2 5 0.20 1 0 1 0 0 0 0 0 0 0
.........................................................................CTGACTGGTTGGCTAACTGA.............................................................................................................................................................. 20 1 6 0.17 1 0 0 1 0 0 0 0 0 0
.............................................................CGTACTCAATGGCTGACTC........................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 1 0 0 0 0 0
..........................TCGTCCCAGCTGGTCGCCA.............................................................................................................................................................................................................. 19 3 12 0.08 1 0 0 0 0 0 1 0 0 0
....................................................................................................ACTGACTGGCTGACTGACTGA.................................................................................................................................. 21 0 17 0.06 1 0 0 0 0 0 0 1 0 0
.............................................................ACTACTAGATGGCTGACT............................................................................................................................................................................ 18 2 18 0.06 1 0 0 0 1 0 0 0 0 0
.........................................................................................................CTGGCTGACTGACTGACTGAC............................................................................................................................. 21 0 19 0.05 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................CTGACTGCCTGACTGACTG............................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 1
..............................................................................................................TGACTGACTGACTGACTGCCTG....................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0
........................................................................................................ACTGGCTGACTGACTGACT................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12726:2184790-2185040 - dvi_2004 GCC-CACCACTCGAGTAGATGTATCCGAGCAG-GAGCGACC----------------------------------AG-----CTGTGCGAGGTGAGTAAGTAGGATGATT--------T-ACC--------GACTGACTAACCG--------ATTGAC------------TAACTGAC----TGACTGA------------CC----GACTGAC-TGACTGACTGAC----GGACTGACTG-A----CTAATCT-GACGGAA-------------------------------------------------------------TCTT---------------------------------GTCTGCACGGTTAGATGGGGTT--TTATTTCAT-----------------------------------------------------------------------------------------------T----------TGCAACTGTGG-AAAATTGTTGGAAAA-TATTTGGTTAAAACCTTTTGGTCGATACTTTTAATA
droMoj3 scaffold_6680:20417094-20417254 - GAC-----------------------------------------------------------------------------------------------------------------------------------TGACTGACTG--------ACTGGT----TGA----CTGACTGAG----AGATGAG------------CA--------GAC-TGACTGAATGGC----TGACTGGCTG-T----CTAAAATAGACAATT--TC-C------------------------------------------TTTTCGTATTAAATGCTATTTGTATTTCACTCACAGACCGAATGCCGTTTGACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TATTTGTTTTTAGCCTTCTG----------------
droGri2 scaffold_15110:17922275-17922431 - CCA-A--------------------------------------------------------------------------------------------------------------------CAGACC----AACTGCTTGAATG--------CCTG--------ACTGACTGACTGAC----TGA----------------CTGACGGATTGAC-GGACTGACGG--------ACT-----GACTGAGTCACT--GAATGAATGCTCCCAT---------------------------------------------------------------------------------------ATGACCA------------------------TCATTCGA------GTCGC---------------------------------------------------------------------------------------------------TGG-AAAATTGTAGGAAATTGCTTAAGTTAGGAATTGTTG----------------
droWil2 scf2_1100000004909:1305132-1305262 + ATC-G-------------------------------------------------------------------------------------------------------------------------------ATT----GATCG----ACTGACTGAC------------TAACTGA--------------------------------CTGAC-TGACCGACTGACT-----ACTA-----A----CTGACT--AAGTTTT------------------------------------------------TCTTTCTATTAAATTTTA--------------------------------------ATTTTTGTTTGTTGTT--TTGCTTTATTTGCCAC----------------------------------TCTGT-------------------------------------------------------------------------------CTTAAAAT-T---------------------------------AT
dp5 XL_group3a:390771-390886 - CTG---------------------------------------------------------------------------------------------------------------------------------GCAGCCTGATTG----ATTGATTGAT------------GGACTGAT----TGA----------------CTGACCGATTGAC-TGACTGACTGACTG----CCAT-----T----GTGATG--CACTGAT----GT----CTAATTA-----------------------------------------------------------------------------------------------------------------------------GTTT--------------------------------------------------------AGT--------------------TTCAATTTTCAATGCAA---------------------------------------------------------TT
droPer2 scaffold_24:144836-144957 + TGA----------------------------------------------------------------------------------------------------------------------CTGAAT----GACTGCATGACTG--------ACTA--------A----CCGACTAAC----TGACTGA------------CTGACTGACTGAC-TGACTGACTG--------ACT-----GACTGACTGACT--GACTGAT----GT----C-------------------------------------------------------------------------------------------------------------------------------------GTTGGCAACAAT-----------------------------------------------------------AGAAGT----------------TGCAACAGTAG-A--------------------------------------------------A
droAna3 scaffold_12943:1087918-1088056 - CTC-GC-CAGGCGAGTGCGTG---------TG-GCGCTACAAGTTGTGCATAAATAATTTGCGGCAGCTGC------------------------------------------------------------GCTT----GATTG----ACTGACTGAC------------TGAAGGAC----TGA----------------CTGCCCGCCTGAC-TGACTGACTGACTGCCTGATTG-----C----CTGACT--GACGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droBip1 scf7180000396427:1496043-1496187 - TT---------------------------------------------------------------------------------------------------------------------GACT--------GACTGCCTAACTG--------ACTGAC----TCA----CTGACTGAA----TGAGTGA------------TG----GACTGGT-GGAGTAACTGAC----GGACCA-----A----CTGACT--GAGTGAATTTCTC-----------------------------------------------------------------------CCCACAGACT----------------------------------------------G-----------------------------------------------------------------------------------AAATTCCATT----------TGTGACCTTCAAAAGGTTGCACATAAA-TA--------------TTTG----------------
droKik1 scf7180000302470:1300271-1300423 - AAT-TG---------------------------------------------AAATAAAT-----------------------------------------------------------T-ACT--------GACTGACTGACTG--------GATGACACAGTGA----CTGACTGAC----TGA------------------------CTGAC-TGACTAACTG--------ACT-------------GACT--GAGTGTAGGTCTG-----------------------------------------------------------------------TTGCCTGTTT-----------GT----GTGTCTGTTTGGG-TTTTTTGTTTTGT------------------------------ACAGAAAAC--TCTGGCT-----------------------TGT----------------------------------------TGG-A-------------------------------------------------AA
droFic1 scf7180000454106:1879992-1880175 - TTA----------------------------------------------------------------------------------------------------------------------GTTATT----GGCTGAGCGATGT--------GATGACTGACTGA----CTGACTGAT----TGA--------------------CTGATTGAC-TGACTGACTG--------ACTGATCA-T----CCAGCT--GATCGGT----CAACGGGGCATTA--------------------------------------------GCTT-------------------------------------------------------------------------------GTCGGCAGGATTAGCGAACAAAAAAATA-------TGGCATTGAAATATGTT-----------------------------------------------------------------------TTAGCTTAAGAGTTTGCGGGATTTCTTGCTAATC
droEle1 scf7180000491201:495644-495813 + ACT-GACTGACTGAATGAGTG---------AT-GGACT---------------------------------------------------------------------------------------------GCCGGAGTGACGG--------ACTA--------A----CTGACTAAC----TGACTAA------------CTGACTAACTGAC-TAACTGACTG--------ACT-----GACTGCCTGACT--GAGTGAATTTTT-------------------------------------------------------------------------------------------------------------------------------CGA------GTCTC---------------------------------TGGCAGTG------------------------------AAATTCCATT----------TGTGACCTTCAAAAGGTTGCACATAGA-TA--------------TTTG----------------
droRho1 scf7180000779914:688560-688677 + GATTGACTAACTGACTGAATG---------AC-T-----------------------------------------AA-----C----------------------------------T-GACTGATTGACTAACTGACTGACTG--------ACTG--------A----TTGACTGAC----TGACTGA------------CTGACTGACTGAC-TGACTGACTG--------ACT-----GACTGACTGACT--GACTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301500:227196-227313 + GAT-----------------------------------------------------------------------------------------------------------------------------------TGAGCGATTGAACGACTGAGTG----------------------------A----------------CTGACTGACTGAC-TGACTGACGGACTG----ACTG-----G----CTGACA--AACTGAC----GC----TGCACAAAG------------------------------------------T-----------------------------------------------------------------------GCGACGCAGTTTTTCGCAACAAC------------------------------------------------------------------------------------------------AGTGTAGGAA-------------------------------------AA
droTak1 scf7180000415880:221511-221631 + GCT-CACCAGGCGTGTGCGTG---------TG-GAGCTACAAGTTGTGCATAAATAATTTGCGGCAGCTGC------------------------------------------------------------GCTT----GATTG----ACTGACTGAC------------TAACTGAC----TGA------------------------CTGAC-TGACTCACTG--------ACTG-----C----TGGATG--GAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409008:885062-885239 - GTT-AA-TGTATGCGTACATG---------AGTGAGCATCAAACAATG------------------------------------------------------------------------GCC--------AGCCAACTGGCGG--------AATGACTA----A----GTGACCGACTGACTGA----------------CTGACTGACTGACTTGACTGACCGACTG----ACTA-----A----CTGACT--AACTGGC----GA-------------------GTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAATTACGCTCAAACA---------------AAATTCAATTGAATTTCCCCTGCAA----------------------------------------CTG----------------
dm3 chrX:16463692-16463826 + CGA----------------------------------------------ATAAATAGACTACAGTAACTGCGACCAGTCCGTCTGCCAG--------------------TGACGTATT-GACT--------GACTAACTGACTG--------ACTGAC----TAA----CTGACTGAC----TGACTAA------------CTGACTGACTGAC-TGACTGACTG--------ACT-----GA----CTGACT--GACTGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:2259722-2259840 - AGT-GG-------------------------------------------------------------------------------------------------GATGAATGAC-----T-ACT--------GACTGACTGACTG--------ACTGA------------CTGACTGAC----TGACTGA------------CTGACTGACTGAC-TGACTGACTG--------ACTGACTG-G----CTGACT--GACTGAC----CCATTTTGCATGAAA------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGT---------------------------------------------------------------------------
droSec2 scaffold_37:102257-102366 + AGT-GACTAACTGACTAAGTG---------AC-T-----------------------------------------AA-----C----------------------------------T-GACT--------AACTGACTAACTG--------ACTA--------A----CTGACTAAC----TGACTAA------------CTGACTAACTGAC-TAACTGACTA--------ACT-----GACTAACTGACT--AACTGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:8722612-8722766 + TGA----------------------------------------------------------------------------------------------------------------------CGCACT----GACTGAATGATTG--------CCGA--------G----CCAACTGAG----GGAATGA------------CCGACTATCTGAC-TGACTGACTG--------ACTGACTG-T----CCAACT--GAGTGAC----GC------------------------------------------------------------------------------------------ATGGCTGC-------------------------ATACTA------AGCCC--------------------------------------------------------TGTTGGTTAATGGGGAAG-------------------------TGG-AATTTGGCTTAGAAA-TATTGC----------GTTA----------------
droEre2 scaffold_4845:20831939-20832113 - GAC-CG---------------------------------------------------------------------------GCTGTGCC--------------------TGTCGCCT-----------------GGCTTGACTG----ACTGACTGAC------------TGACTGAA----TGACTGACTGAGTGAATGACTGAGGATGTGAG-----GT------------ATTGACT-GA----CTGATG--GACAGAT----G-------AACAGATGGACATGTATTGTTTGCGACGGCCGCTTTTCTTACACTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAATTTT------CCGCTGTGG-A-------------------------------------------------AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCC-CACCACTCGAGTAGATGTATCCGAGCAG-GAGCGACC----------------------------------AG-----CTGTGCGAGGTGAGTAAGTAGGATGATT--------T-ACC--------GACTGACTAACCG--------ATTGAC------------TAACTGAC----TGACTGA------------CC----GACTGAC-TGACTGACTGAC----GGACTGACTG-A----CTAATCT-GACGGAA-------------------------------------------------------------TCTT---------------------------------GTCTGCACGGTTAGATGGGGTT--TTATTTCAT-----------------------------------------------------------------------------------------------T----------TGCAACTGTGG-AAAATTGTTGGAAAA-TATTTGGTTAAAACCTTTTGGTCGATACTTTTAATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............GTAGATGTATCCGAGCAG-GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................TGA------------CC----GACTGAC-TGACTGA.....................................................................................................................................................................................................................................................................................................................................................19200.051010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GA------------CC----GACTGAC-TGACTGACTGAA----............................................................................................................................................................................................................................................................................................................................................23200.051010000000000000000000000000000000000000000000000000000000000000
droMoj3
GAC-----------------------------------------------------------------------------------------------------------------------------------TGACTGACTG--------ACTGGT----TGA----CTGACTGAG----AGATGAG------------CA--------GAC-TGACTGAATGGC----TGACTGGCTG-T----CTAAAATAGACAATT--TC-C------------------------------------------TTTTCGTATTAAATGCTATTTGTATTTCACTCACAGACCGAATGCCGTTTGACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TATTTGTTTTTAGCCTTCTG----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CCA-A--------------------------------------------------------------------------------------------------------------------CAGACC----AACTGCTTGAATG--------CCTG--------ACTGACTGACTGAC----TGA----------------CTGACGGATTGAC-GGACTGACGG--------ACT-----GACTGAGTCACT--GAATGAATGCTCCCAT---------------------------------------------------------------------------------------ATGACCA------------------------TCATTCGA------GTCGC---------------------------------------------------------------------------------------------------TGG-AAAATTGTAGGAAATTGCTTAAGTTAGGAATTGTTG----------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATC-G-------------------------------------------------------------------------------------------------------------------------------ATT----GATCG----ACTGACTGAC------------TAACTGA--------------------------------CTGAC-TGACCGACTGACT-----ACTA-----A----CTGACT--AAGTTTT------------------------------------------------TCTTTCTATTAAATTTTA--------------------------------------ATTTTTGTTTGTTGTT--TTGCTTTATTTGCCAC----------------------------------TCTGT-------------------------------------------------------------------------------CTTAAAAT-T---------------------------------ATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................GACTGAC------------TAACTGA--------------------------------CTGAC-TG..........................................................................................................................................................................................................................................................................................................................................................21200.05101000
........................................................................................................................................................ACTGAC------------TAACTGA--------------------------------CTGAC-TGAC........................................................................................................................................................................................................................................................................................................................................................22200.05110000
dp5
CTG---------------------------------------------------------------------------------------------------------------------------------GCAGCCTGATTG----ATTGATTGAT------------GGACTGAT----TGA----------------CTGACCGATTGAC-TGACTGACTGACTG----CCAT-----T----GTGATG--CACTGAT----GT----CTAATTA-----------------------------------------------------------------------------------------------------------------------------GTTT--------------------------------------------------------AGT--------------------TTCAATTTTCAATGCAA---------------------------------------------------------TTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................GAC-TGACTGACTGACTG----CC........................................................................................................................................................................................................................................................................................................................................19160.0610100000000
...........................................................................................................................................GATTG----ATTGATTGAT------------GGA......................................................................................................................................................................................................................................................................................................................................................................................................18170.0610000000001
droPer2
TGA----------------------------------------------------------------------------------------------------------------------CTGAAT----GACTGCATGACTG--------ACTA--------A----CCGACTAAC----TGACTGA------------CTGACTGACTGAC-TGACTGACTG--------ACT-----GACTGACTGACT--GACTGAT----GT----C-------------------------------------------------------------------------------------------------------------------------------------GTTGGCAACAAT-----------------------------------------------------------AGAAGT----------------TGCAACAGTAG-A--------------------------------------------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CTC-GC-CAGGCGAGTGCGTG---------TG-GCGCTACAAGTTGTGCATAAATAATTTGCGGCAGCTGC------------------------------------------------------------GCTT----GATTG----ACTGACTGAC------------TGAAGGAC----TGA----------------CTGCCCGCCTGAC-TGACTGACTGACTGCCTGATTG-----C----CTGACT--GACGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TT---------------------------------------------------------------------------------------------------------------------GACT--------GACTGCCTAACTG--------ACTGAC----TCA----CTGACTGAA----TGAGTGA------------TG----GACTGGT-GGAGTAACTGAC----GGACCA-----A----CTGACT--GAGTGAATTTCTC-----------------------------------------------------------------------CCCACAGACT----------------------------------------------G-----------------------------------------------------------------------------------AAATTCCATT----------TGTGACCTTCAAAAGGTTGCACATAAA-TA--------------TTTG----------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAT-TG---------------------------------------------AAATAAAT-----------------------------------------------------------T-ACT--------GACTGACTGACTG--------GATGACACAGTGA----CTGACTGAC----TGA------------------------CTGAC-TGACTAACTG--------ACT-------------GACT--GAGTGTAGGTCTG-----------------------------------------------------------------------TTGCCTGTTT-----------GT----GTGTCTGTTTGGG-TTTTTTGTTTTGT------------------------------ACAGAAAAC--TCTGGCT-----------------------TGT----------------------------------------TGG-A-------------------------------------------------AASizeHit CountTotal NormTotal
No Reads
droFic1
TTA----------------------------------------------------------------------------------------------------------------------GTTATT----GGCTGAGCGATGT--------GATGACTGACTGA----CTGACTGAT----TGA--------------------CTGATTGAC-TGACTGACTG--------ACTGATCA-T----CCAGCT--GATCGGT----CAACGGGGCATTA--------------------------------------------GCTT-------------------------------------------------------------------------------GTCGGCAGGATTAGCGAACAAAAAAATA-------TGGCATTGAAATATGTT-----------------------------------------------------------------------TTAGCTTAAGAGTTTGCGGGATTTCTTGCTAATCSizeHit CountTotal NormTotal
No Reads
droEle1
ACT-GACTGACTGAATGAGTG---------AT-GGACT---------------------------------------------------------------------------------------------GCCGGAGTGACGG--------ACTA--------A----CTGACTAAC----TGACTAA------------CTGACTAACTGAC-TAACTGACTG--------ACT-----GACTGCCTGACT--GAGTGAATTTTT-------------------------------------------------------------------------------------------------------------------------------CGA------GTCTC---------------------------------TGGCAGTG------------------------------AAATTCCATT----------TGTGACCTTCAAAAGGTTGCACATAGA-TA--------------TTTG----------------SizeHit CountTotal NormTotal
No Reads
droRho1
GATTGACTAACTGACTGAATG---------AC-T-----------------------------------------AA-----C----------------------------------T-GACTGATTGACTAACTGACTGACTG--------ACTG--------A----TTGACTGAC----TGACTGA------------CTGACTGACTGAC-TGACTGACTG--------ACT-----GACTGACTGACT--GACTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GAT-----------------------------------------------------------------------------------------------------------------------------------TGAGCGATTGAACGACTGAGTG----------------------------A----------------CTGACTGACTGAC-TGACTGACGGACTG----ACTG-----G----CTGACA--AACTGAC----GC----TGCACAAAG------------------------------------------T-----------------------------------------------------------------------GCGACGCAGTTTTTCGCAACAAC------------------------------------------------------------------------------------------------AGTGTAGGAA-------------------------------------AASizeHit CountTotal NormTotal
No Reads
droTak1
GCT-CACCAGGCGTGTGCGTG---------TG-GAGCTACAAGTTGTGCATAAATAATTTGCGGCAGCTGC------------------------------------------------------------GCTT----GATTG----ACTGACTGAC------------TAACTGAC----TGA------------------------CTGAC-TGACTCACTG--------ACTG-----C----TGGATG--GAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTT-AA-TGTATGCGTACATG---------AGTGAGCATCAAACAATG------------------------------------------------------------------------GCC--------AGCCAACTGGCGG--------AATGACTA----A----GTGACCGACTGACTGA----------------CTGACTGACTGACTTGACTGACCGACTG----ACTA-----A----CTGACT--AACTGGC----GA-------------------GTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAATTACGCTCAAACA---------------AAATTCAATTGAATTTCCCCTGCAA----------------------------------------CTG----------------SizeHit CountTotal NormTotal
No Reads
dm3
CGA----------------------------------------------ATAAATAGACTACAGTAACTGCGACCAGTCCGTCTGCCAG--------------------TGACGTATT-GACT--------GACTAACTGACTG--------ACTGAC----TAA----CTGACTGAC----TGACTAA------------CTGACTGACTGAC-TGACTGACTG--------ACT-----GA----CTGACT--GACTGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................ATAGACTACAGTAACTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AC----TGACTAA------------CTGACTGACTGA..............................................................................................................................................................................................................................................................................................................................................................21160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACTGAC----TAA----CTGACTGAC----TGA..........................................................................................................................................................................................................................................................................................................................................................................................21160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................GAC----TGACTAA------------CTGACTGACT................................................................................................................................................................................................................................................................................................................................................................20160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................G--------ACTGAC----TAA----CTGACTGAC----T............................................................................................................................................................................................................................................................................................................................................................................................20160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GACT--------GACTAACTGACTG--------ACT........................................................................................................................................................................................................................................................................................................................................................................................................................20160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ACT--------GACTAACTGACTG--------ACTGA......................................................................................................................................................................................................................................................................................................................................................................................................................21160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GACTGACTGAC-TGACTGA.....................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................GACTGAC----TGACTAA------------CTGACTG...................................................................................................................................................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GACTG--------ACTGAC----TAA----CTGACTG...................................................................................................................................................................................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGACTAA------------CTGACTGACTGAC-TGACT.......................................................................................................................................................................................................................................................................................................................................................25120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGACTAA------------CTGACTGACTGAC-TGAC........................................................................................................................................................................................................................................................................................................................................................24120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TGACTGAC----TGACTAA------------CTGAC.....................................................................................................................................................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................TGACTG--------ACTGAC----TAA----CTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................ACT--------GACTAACTGACTG--------ACTGAC----.................................................................................................................................................................................................................................................................................................................................................................................................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACTGAC----TAA----CTGACTGAC----TGAC.........................................................................................................................................................................................................................................................................................................................................................................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AC----TGACTAA------------CTGACTGACTGAC-............................................................................................................................................................................................................................................................................................................................................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GACTG--------ACTGAC----TAA----CTGACTC...................................................................................................................................................................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GACTGAC----TGACTAA------------CTGACTC...................................................................................................................................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TGACTG--------ACT-----GA----CTGACT--GA..................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CTGACTGACTGAC-TGACTGAC....................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GACTAA------------CTGACTGACTGA..............................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................C----TGACTAA------------CTGACTGACT................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................CTAA------------CTGACTGACTGAC-TGAC........................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ACTGACTGAC-TGACTGACTG--------..........................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TGACTGACTG--------ACT-----GA----CTGA........................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GAC----TAA----CTGACTGAC----TGA..........................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................A------------CTGACTGACTGAC-TGACTGA.....................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................TAA------------CTGACTGACTGAC-TGA.........................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ACTGAC-TGACTGACTG--------ACT-----GA----............................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GACTAA------------CTGACTGACTGAC-T...........................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CT--------GACTAACTGACTG--------ACT........................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................ACTGACTG--------ACT-----GA----CTGACT--GA..................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ACTAA------------CTGACTGACTGAC-TGA.........................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GACTAACTGACTG--------ACTGAC----T................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TGAC----TAA----CTGACTGAC----TGA..........................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGACTAA------------CTGACTGACTGA..............................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CTGAC----TAA----CTGACTGAC----T............................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................GACTGACTGAC-TGACTGACTG--------ACT-----..................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ACTG--------ACT-----GA----CTGACT--GACTGA..............................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TGAC----TAA----CTGACTGAC----TGACT........................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................TGACTAA------------CTGACTGACTGAC-T...........................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................AC-TGACTGACTG--------ACT-----GA----CTGA........................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GACTG--------ACT-----GA----CTGACT--GACTGA..............................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GAC----TAA----CTGACTGAC----TGACT........................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TG--------ACT-----GA----CTGACT--GACTGA..............................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................T--------GACTAACTGACTG--------ACTGAC----T................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................T--------GACTAACTGACTG--------ACTGA......................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GACTAACTGACTG--------ACTGA......................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TAA------------CTGACTGACTGAC-TGACT.......................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droSim2
AGT-GG-------------------------------------------------------------------------------------------------GATGAATGAC-----T-ACT--------GACTGACTGACTG--------ACTGA------------CTGACTGAC----TGACTGA------------CTGACTGACTGAC-TGACTGACTG--------ACTGACTG-G----CTGACT--GACTGAC----CCATTTTGCATGAAA------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGT---------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................C-----T-ACT--------GACTGACTGACTG--------A..........................................................................................................................................................................................................................................................................................................................................................................................................................1921.00200002000000000000
........................................................................................................................................................................................................................GACTGACTG--------ACTGACTG-G----C...........................................................................................................................................................................................................................................................................................................................19200.15310200000000000000
.......................................................................................................................................GACTGACTG--------ACTGA------------CTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
..............................................................................................................................................................................................................................CTG--------ACTGACTG-G----CTGACT--....................................................................................................................................................................................................................................................................................................................18200.05101000000000000000
...........................................................................................................................................GACTG--------ACTGA------------CTGACTGAC----.............................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
...........................................................................................................................................................GA------------CTGACTGAC----TGACTGA------------C.........................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
...........................................................................................................................................................................GACTGAC----TGACTGA------------CTGAC.....................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
..........................................................................................................................................................................................................................................CTGACTG-G----CTGACT--GACTG...............................................................................................................................................................................................................................................................................................................19200.05100000000000001000
...............................................................................................................................................................................................................................................TG-G----CTGACT--GACTGA..............................................................................................................................................................................................................................................................................................................15200.05100000001000000000
...............................................................................................................................................G--------ACTGA------------CTGACTGAC----TGAC.........................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
...................................................................................................................................................................................................................GAC-TGACTGACTG--------ACTGA.....................................................................................................................................................................................................................................................................................................................................18200.05100000010000000000
droSec2
AGT-GACTAACTGACTAAGTG---------AC-T-----------------------------------------AA-----C----------------------------------T-GACT--------AACTGACTAACTG--------ACTA--------A----CTGACTAAC----TGACTAA------------CTGACTAACTGAC-TAACTGACTA--------ACT-----GACTAACTGACT--AACTGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TGA----------------------------------------------------------------------------------------------------------------------CGCACT----GACTGAATGATTG--------CCGA--------G----CCAACTGAG----GGAATGA------------CCGACTATCTGAC-TGACTGACTG--------ACTGACTG-T----CCAACT--GAGTGAC----GC------------------------------------------------------------------------------------------ATGGCTGC-------------------------ATACTA------AGCCC--------------------------------------------------------TGTTGGTTAATGGGGAAG-------------------------TGG-AATTTGGCTTAGAAA-TATTGC----------GTTA----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................GATTG--------CCGA--------G----CCAACTGAG----GGAAT........................................................................................................................................................................................................................................................................................................................................................................................24112.0012000000000012
droEre2
GAC-CG---------------------------------------------------------------------------GCTGTGCC--------------------TGTCGCCT-----------------GGCTTGACTG----ACTGACTGAC------------TGACTGAA----TGACTGACTGAGTGAATGACTGAGGATGTGAG-----GT------------ATTGACT-GA----CTGATG--GACAGAT----G-------AACAGATGGACATGTATTGTTTGCGACGGCCGCTTTTCTTACACTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAATTTT------CCGCTGTGG-A-------------------------------------------------AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 04:53 AM