ID:

dvi_19960

 Coordinate:

scaffold_13049:14560988-14561258 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.1 -19.0 -18.9

Flybase annnotation

CDS [Dvir\GJ13571-cds]; CDS [Dvir\GJ13571-cds]; exon [dvir_GLEANR_13453:1]; exon [dvir_GLEANR_13453:2]; intron [Dvir\GJ13571-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCACTTCTGGGAGATGCGCGTCATTACAGCGCTGGCAGGTACAGATGTGGTAAGTTCTAGAGCACGGCAAATGCATCTTAAGGGATTAAAATAGTCAGCGAGATAAGCTGCATTGTAAAGATAAGACAACAGGGACACACTTGTCACTGTCTGTCTGTTTTGGCATGAGGAAATCGGAGCATTGGTAGCCAGAAACCGAGTGGCTGAGTTGATAAGCAAATCATGTACCCCTCTCGAGTCGCGCGCTTACAAAAAGGTCAATGCAAACATAATAGTCCCAGTTATTACAATTTCTTTCTCTGTCTCGTAATCTTTTCTAGATGTTTGGCATAGGCACTGACCGCGTTAATCTGGAACAATTTAAATTTCA
******************************************************************************************************************************************************************************.....((((((...(((.......(((((((.((.((((.....................)))).)))).))))).......)))))))))..................**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060676
9xArg_ovaries_total
 M027
male body		 M028
head
 SRR060655
9x160_testes_total
 SRR060658
140_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 SRR1106720
embryo_8-10h
 SRR1106730
embryo_16-30h
 V053
head
 SRR060666
160_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 V047
embryo
 GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................GCACTGACCGCGTTAATCTGG................ 21 0 1 3.00 3 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TTGGCATGAGGAAGTCGGAGC.............................................................................................................................................................................................. 21 1 1 3.00 3 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................ATGTAAACATAATAGTCCCAG......................................................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................TGCAAACATAATAGTCCCAGT........................................................................................ 21 0 1 2.00 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTCTGGGAGATGCGCGTCATT......................................................................................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CAGCACTGTCAGGTAAAGATGT.................................................................................................................................................................................................................................................................................................................................. 22 3 2 1.50 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................GCGCTGACCGCGTTAATCTGG................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TACCCCTCTCGCGCCGCGCGC............................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTCTGGGAGATGCGCGTCA........................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................TTTGGCATAGGCACTGACCGC.......................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................TTTCTAGATGTTTGGCATGGG.................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................TCTAGATGTTTGGCATAGGCAT................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TCGGAGCATTGGTAGCCAGAA................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTGTCTGTTTTGGCATGAGGA....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................TTTCTCTGTCTCGTAATCTTT....................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TGCGCGTCATTGCAGCGCTGG............................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATGAGGAAGTCGGAGCATTGG......................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................AAAAAGGTCAATGCAAACATAATAGTCCCAG......................................................................................... 31 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................TAGATGTTTGGCATAGGCACT................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TTTCTTTCTCTGTCTCGTAAT........................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGCCCCTCTCGAGTCGCGC.............................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TCTGGGAGATGCGCGTCATTACAGC.................................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATGTACCCCTCTCGAGTCGCG............................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................AGCGCTGGCAGGGACAGATGTGAT............................................................................................................................................................................................................................................................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................CTGACCGCGTTAATCTGGAAC............. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGACAACAGGGACACACTTGT.................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGAGCTGATAAGCAAATCATG................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................ATTTCTTTCTCTGTCTCGTGA............................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TACCCCTCTCGAGCCGCGCGC............................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AGCAGGGACACACTTGTCACT.............................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TGCTCTGTCTCGTAATCTTTTCTA................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................TACAGATGTGGTAAGTTCTAG...................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GAGATGCGCGTCATTGCAGCG................................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...ACTTCTGGGAGATGCGCGTCA........................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTTCTAGAGCACGGCAAATG......................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................ACCCCTCTCGAGTCGCGCGCT........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................CTCTGTCTCGTAATCTTTTCTAG.................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATAAGACAACAGGGACACACT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTGAGCTGATAAGCAAATCATC................................................................................................................................................. 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................ATGTTTGGCATAGGCACTG............................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TGCAGCGCTGGCAGGTACA....................................................................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTACCCCTCTCGAGCCGCGCG............................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................GTGGAAAGTTCTAGAGCACGG............................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GGCATGAGGAAGTCGGAGCATC........................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTCTGGGAGATGCGCGTCATTT........................................................................................................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GGCAAATGCATCTTAAGGGATT........................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................TTCTAGATGTTTGGCATAGGC................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CAAGTCATGTACCCCTCTCGA..................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGAGGAAATCGGAGCATTGGT........................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CTGTCTGTCTGTTTTGGCATG........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGTGGCCAGAAGCCGAGTGGC...................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AAATCATGTACCCCTCTCGAG.................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AGATGCGCGTCATTACAGCG................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TTGGCATGAGGAAATCGGGGC.............................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTCTGGGAGATGCGCGTCAT.......................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................TAATCTTTTCTAGATGTTTGGC......................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TTGGCATGGGCACTGACCGCG......................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATGTACCCCTCTCGAGTCGCGC.............................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................GATGTGGTAGGTTCTGGAGCA.................................................................................................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATTGGTAGCCAGAAGCCGAGT......................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................TCAATGCAAACATAATAGTCC............................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TTGGCATGAGGAGGTCGGAGC.............................................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GCATGAGGAAGTCGGAGCA............................................................................................................................................................................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................CTAGATGTTTGGCATAGGCAC................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TAGTCAGCGAGATGGGCTGCA.................................................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CCCAGTGGCCGAGTTGTTAAG.......................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATCGGAGCCTTGGTGGCCAGG................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................GGATTGAAATGGTCGGCGAGA........................................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CTGGCAGGTAAAGATGT.................................................................................................................................................................................................................................................................................................................................. 17 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................TGGTAGGTATAGATGTGGTGAG............................................................................................................................................................................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................ATGGGACAACAGGGACACACG..................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GAGGGCGTTAATGTGGAACA............ 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................CCCAGTGGCTGAGTGGTTAAG.......................................................................................................................................................... 21 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................CTTTTCTACAAGTTTGGCA........................................ 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................TCTGTCAGGTACAGATGT.................................................................................................................................................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................CTGTTTTGGAAGGAGGAA...................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................................................................GCTCAGGCACTGACGGCGTT....................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................GTAAGCTGCATTGTACCGA......................................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................CGCAGGTACGGACGTGGT............................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACGTGAAGACCCTCTACGCGCAGTAATGTCGCGACCGTCCATGTCTACACCATTCAAGATCTCGTGCCGTTTACGTAGAATTCCCTAATTTTATCAGTCGCTCTATTCGACGTAACATTTCTATTCTGTTGTCCCTGTGTGAACAGTGACAGACAGACAAAACCGTACTCCTTTAGCCTCGTAACCATCGGTCTTTGGCTCACCGACTCAACTATTCGTTTAGTACATGGGGAGAGCTCAGCGCGCGAATGTTTTTCCAGTTACGTTTGTATTATCAGGGTCAATAATGTTAAAGAAAGAGACAGAGCATTAGAAAAGATCTACAAACCGTATCCGTGACTGGCGCAATTAGACCTTGTTAAATTTAAAGT
****************************************************************************************.....((((((...(((.......(((((((.((.((((.....................)))).)))).))))).......)))))))))..................****************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060671
9x160_males_carcasses_total
 M047
female body
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060679
140x9_testes_total
 M027
male body		 M028
head
 SRR060654
160x9_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060666
160_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR1106729
mixed whole adult body
 SRR060657
140_testes_total
 SRR060658
140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
..............................................................................................................................TGTTGTCCCTGTGTGAACAGT................................................................................................................................................................................................................................ 21 0 1 4.00 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................GGGTCAATAATGTTAAAGAAA......................................................................... 21 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................TGACTGGCGCAATTAGACCTT.............. 21 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TCAGCGCGCTAATGTTTTTCC................................................................................................................. 21 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TCGTGCCGTTTACGTAGAATT................................................................................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CTGGCGCCATTAGACCTTGTT........... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GAAAAGGTCTACAAACCGTAT...................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................AGAAAGAGACAGAGCATTAGGG........................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................ACTGGCGCAATTAGACCTTGT............ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................GAAAGAGACAGAGCATTAGA......................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GGCTCACCGACTCAACTATT........................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGCCGTTTACGTAGAATTCCC.............................................................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CTGTGTGGACAGTGACAGACAGG...................................................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................ATCCGTGACTGGCGCAATTAG................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TCCATGTCTACACCATTCAAG......................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCTCGGCGCGCGAATGTTTTTC.................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................TAAAGAAAGAGACAGAGCATT............................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................CTCTATTCGACGTAACATTTC.......................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GGCGCAGTTAGACCTTGTTAA......... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................TCCGTGACTGGCGCAATTAGA.................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................GTTACGTTTGTATTATCATGGTC......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................CCGTGACTGGCGCAATTAGAC................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................ACCGTATCCGTGACTGGCGC......................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................AGGGTCAATAATGTTAAAGAA.......................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGACCGTACTCCTTTAGCCTC............................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CGGTCTTTGGCTCACCGACTC.................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGGCTCACCGACTCGACTATT........................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TGGCGCAATTAGACCTTGTT........... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CTCGTGCCGTTTACGTAGAAT.................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CTCCTTTAGCCTCGTAACCAT....................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGAACAGTGACAGACAGACAA................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TGGCGCAGTTAGACCTTGTTA.......... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................GTTTGTGTTATCAGGGTCAGT...................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTCTGTTCTGTTGTCCCTGTG........................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................GTCGCGACCGTCCATGTCTAC................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......GACCCTCTGCGCGCAGTAATG....................................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GACCCTCTACGCGCAGTAATG....................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................AGCATTAGAAAAGATCTACGA............................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CTCTACGCGCAGTAATGTC..................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........CCCTCTACGCGCAGTAATGT...................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CGGTCTTTGGCTCACCGACT................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TCTCGTGCCGTTTACGTAGAA................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................CAATGATGTTAAAGAAAGAGA..................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AACCGTATCCGTGACTGGCG.......................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GCCGTTTACGTAGAATTCCCT............................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................ATGTCGCGACCGTCCATGTCTA.................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................CGCGACCGTCCATGTCTACAC................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CACCGACTCGACTATTCGTTT...................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................CGTATCCGTGACTGGCGCAGT...................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGGCTCACCGACTCGACTATT........................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTTCTATTCTGTTGTCCCT........................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CGTTTAGTACGTGGGGAGA........................................................................................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCCTTTAGCCTCGTAACCATC...................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AACCGTATCCGTGACTGGCGC......................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CTTTGGCTCACCGACTCAACTA............................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CGCAGTAATGTCGCGACCGTC............................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................CTCCAGTTACGTTTGTATTATC............................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CTGGCGCAATTAGACCTTGTT........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................GTGACTGGCGCAATTAGACCT............... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................TGTTAAAGGGAGAGACAGAGC............................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................CTCGACTATTCGTTTAGTACA................................................................................................................................................ 21 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................CGCTAGAAAAGATCTACA.............................................. 18 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............TTGCGCAGTAGTGTCGCGACCGT............................................................................................................................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................TAAAGAAAGAGACAGAGCGTT............................................................ 21 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGACAGACTGGCGAAACCGTA............................................................................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................ATAAGAAGAGATCGACAAACC.......................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................AACCGTGCCTGGCGAAATT..................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................................................................ATCCGAATCAGTGACTGG............................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................AGAATGGGCATTAGAAAAG..................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................TTGTACTATCAGGCTCTA....................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:14560938-14561308 + dvi_19960 TGCACTTCTGGGAGATGCGCGTCATTACAGCGCTGGCAGGTACA-GATGTGGTAAGTTCTAGAG-----CAC--GGCAAATGCATCT-TAAGGG------------ATTAA-AATAGTCAGC-------GAGATAA-----------------------------------------------------------------------------------------------------------------GCTGCATTGTAAAGATAAGACAACAGGGACACACTTGTCACTGTCTGTCTGTT--TTGGCATGAGGAAATCGG---AGCATTGGTAGCCAGAAAC--CGAGTGGCTGAGTTGATAAGCAAATCATGTACCCCTCTCGAGTC--------GCGC-GCTTACAAAAAGGTCAATGCAAA-CATAATAG---TCC--C--AGTT--ATTACAATT-----TCTTTCTC-TGTCTCGTAAT---CTTTTCTAGATGTTTGGCATAGGCACTGACCGCGTTAATCTGGAACAATTTAAATTTCA
droMoj3 scaffold_6680:12739124-12739508 - dmo_2473 TTCATTTCTGGGAAATGCGTATAATTACAGTGCTGGCTGGTACT-GATGTGGTAAGTTCTAGTG-----CATG-GGCAACTGCATCC-AAAGGG------------ATTCA-AATAGCTAGG-------GAGATAA-------------GCGCCACTTTAAAAGATAACACAGCT-GTA-ACGCACTTGA--------------------------------------------------------------------------------------CACAG-----------TCCGCCTGTCTCTCGGCATGAGGAAATCTGTGGTGCA----TAGTGAGTGA---TGAGTGA--GAGCTGATAAGCCAGTTGTGTATTCCT--ATTTTAACTCGGCCGCCCGGTTTATGAAAAGGTCAATGCAAA-CGTAATAA---T----TCCACTCG-GTTACTATTTATTTGTCTTTCCCTCTCTCTTAAT---ATTTTCTAGATGTTTGGCATAGGCACCGATAGTGTTAATCTGGAACAATTCAAATTCCA
droGri2 scaffold_15110:15673411-15673751 - TGCACTTCTGGGAGATGCGCGTCATCACAGTGCTGGCGGGCACA-GATGTGGTAAGTTCTAGAATAGAACACGCAGCAACTGCATCAGTCAGAG------------ATTGAGAACAGTCTAA---GGTTGAGATAA-------------GCAC----------------------------------------------------------------------------------------------------CACTTTGCCGATAAGACTA------------TGTCAA-----------------TCATGAGGAAATCTG---CTTA--GACA----------------------ATTGATAAGCAT-TCATATGAATATATAGAATAACAAAGTCA----TCTTACAAAAAGGTCAATGCAAA-AATAGT-----AGT--T-TAATTGAATTACTATCT----CTTTTACT-CTTATC---ATGTCATCATTCAGATGTTTGGCATTGGAACTGACAGCTTCAATTTGGAGCAGTTTAAATTTCA
droWil2 scf2_1100000004837:1582501-1582599 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTCAATGTAAA-TATT---------------------TTTCCATTT-----GTTTTCCC-CTTT----------ATCTCCTAGATGTTTGGCATCGGCACGGAAAATGTTAATTTGGAACAATTTAAATTCCA
dp5 XR_group8:8268000-8268121 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATTA---------TTAAACTCAAATCCCGATT-----CCCTTTCC-CATCTCCCCCCCTTCTCCCATAGATGTTCGGCATAGGAACGGAGAGCGTTAATCTGGGGCAATTCAAGTTTCA
droPer2 scaffold_40:458825-458946 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATTA---------TTAAACTCAAATCCCGATT-----CCCTTTCC-CATCTCCCCCCCTTCTCCCATAGATGTTCGGCATAGGAACGGAGAGCGTTAATCTGGGGCAATTCAAGTTTCA
droAna3 scaffold_13337:11198468-11198883 - TGCACTTTTGGGAGATGCGAGTCATTACCGCACTGGCTGGAACA-GATGTGGTAGGTTGTCAGG-----TCG--GGTTATCACCCCT-TTAGTGGCTTGACAACCA-------ATGATT----------AAGATGAAAGTCAGTCAAAGTCGCTACACGAAAATAGAACA--ACTTGTA-GGGCATCTGGTGTGCTCGATTCCATTGGAAACGATTTAATTGTTCGCTCCATTGTA---CGGATTACAGATTACAATGAAGCGATAAGATATGAGAAGCAGACGCGT------------------CCAGAGAAGGAAATCTC---TCTA--GACA--------GCTCA-----ACTAGCTGATAAGCA-----------------------------------------GAAAAGTTCAATGTAAA-CATCGGTGTGTATTCTT--------ACAATAATC-----GGTTTCCT-CTTTCT--------TATCCCTAGATGTTCGGCATCGGTACCGGCAACGTCCACTTAGAGCAGTTCAAGTTCCA
droBip1 scf7180000396569:195260-195675 + TGCACTTCTGGGAGATGCGAGTCATCACCGCGCTGGCTGGCACA-GATGTGGTAGGTTCGCAGG-----TCG--GGTTATCACCCCT-TCAGCGGCTTGACAACC-------GATGATT----------AAGATGAAAGTCAGTCAAAGTCGCTACACGAAAATAGAACA--GCTTGTA-GGGCATCTGGTGTGCTCGATTCCATTCGAAACGATTTAATTGTTGGCTCCATTGTA---CGGATTACAGATTACAATGAAGCGATAAGATATGAGAAGCAGACGCGT------------------CCAGAGAAGGAAATCTC---TCTA--GACA--------GCTCA-----ACTAGCTGATAAGCA-----------------------------------------GAAAAGTTCAATGTAAA-CATCGGTGTGTATTCTT--------ACAATAATC-----GGCTTCCT-TTTTCT--------TATCCCTAGATGTTCGGCATCGGCACCGGTAGCATCAATTTGGAGCAGTTCAAGTTCCA
droKik1 scf7180000302697:400533-400644 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGCAAA-CAATGT---GTGCT--C--------TTAACAATC-----TGCTTCCC-TGTTTTT---C---CTCTTCTAGATGTTCGGCATCGGCACTGAGAGCGTTAATCTAGGGCAGTTCAAGTTTCA
droFic1 scf7180000454065:1345829-1346230 - TTCACTTCTGGGAGATGCGCGTCATTACGACGCTGGCCGGCACA-GATGTGGTGAGCT--------------------ATCAACC-------CGGCTTGGCAACTATGTGG-GATGCACGGC-------GAGATGAATGTCAGTCAAAGTCGCCGTCTGAAAATAGAACGCTGCCTGCGGAGGCATCTGGTGTGCTCGATTCCATTGGCAACAACTTAATTGTTCGCACCATTGTACGCTAGATTACAGATTACAACGAAGCGATAAGATAACAGACGCGG------------------------CGGGACGAGGAAATCTC---GGCA--GACA--------GCCCA-----ACTAGATGATAAGCCAGA---------------------------------------AAAAGTTCAATGTAAA-CAATGT-----TTT--C--------TTTTTAATC-----GGCTTCCC-TTTTCT----C---TTCTCCTAGATGTTTGGCATCGGCACGGAAAGCGTAAATCTAGGGCAGTTCAAGTTCCA
droEle1 scf7180000491193:5237031-5237125 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATGT---------------------------------GTCTTCCC-TTTTTT--------CCGCCTTAGATGTTCGGGATCGGAACGGAGAGCGTTAATCTAGGGCAGTTCAAGTTCCA
droRho1 scf7180000779350:1269-1374 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATGT-----GTT--C--------TTAATAATC-----GCCTTCCC-TTTT----------TTCTCCTAGATGTTCGGGATCGGGACGGAGAGCGTTAATCTAGGGCAGTTCAAGTTCCA
droBia1 scf7180000302334:409915-410313 - TCCACTTCTGGGAGATGCGCGTCATCACGACTCTGGCCGGCACA-GATGTGGTGAGTT--------------------ATCAGCC-------CGGCTTGGCAACTAGTTGG-GATGCTCCGC-------GAGATGAATGTCAGTCAAAGTCGCCGCCTTAAAATAGATCACCGCCTGCT-AGGCATCTGGTGTGCCGGATTCCATTGCTTACGGCTTGATTGTTCACTTTATTGTACTACGGATTACAGATTACAAGGCGGCGATAAGATAAGAGACGCAG------------------------CGGGTGGGGTTAAACTC---GGCA--GACA--------GTCCA-----ACTAGATGATAAGCCAGC---------------------------------------AAAAGTTCAATGTAAA-CAATGT-----GTT--C--------TTTATAATC-----TCCTTCCC-TTTTC---------TCCTCTTAGATGTTCGGGATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCA
droTak1 scf7180000415815:227000-227369 + TCCACTTTTGGGAGATGCGCGTCATCACCACTCTGGCCGGCACC-GATGTGGTGAGTT--------------------ATCAGCC-------CGGCTTGGCAACTAGTTGG-GATGCTCCGCTAGA---GAGATGAAAGTCAGTCAAAGTCGCCGCCTTAAAATAGATCACTGCCTA------CAGCTGGTGAGCTCGATTCCATTGCTTACGACTCGATTGTTGGCTTCATTGTATTACGGATTACAGATTACAAGGCGGCGATAAGATAACAGACG----------------------------------------TCGC---AGCA--GACA--------GCCCA-----ACTAGATGATAAGCCAGT--------------------------------------GAAAAGTTCAATGTAAA-CAATGT---GTTC---------------------------CCTT-----CTCCA--------TCCCCCTAGATGTTCGGCATCGGCACGGAGAGCGTTAATCTAGGGCAGTTCAAGTTCCA
droEug1 scf7180000409824:14142-14245 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATAC---G-TCT--C--------TTTGTAATC-----GGCTTCCC-TTTT-------------TTCTAGATGTTCGGCATCGGTACGGAGAGCGTTAATCTAGGGCAATTCAAGTTCCA
dm3 chr3L:15961744-15962148 + TGCACTTTTGGGAGATGCGCGTCATCACGACTCTGGCCGGCACG-GATGTGGTTAGTT--------------------ATCAGGC-------CGGCTTGGCAACTAGTTGG-GATGCTCAGC-------ATGATGAATGTCACTCAAAGTCGCCGCCTTAAAATAGAACACAACTAACC-AGGCATCTGGTGTGCTCGTTTCCATTGGAGACGACTTGATTGTTCGCTTCGTTGTATTATGGATTACAGATTACAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGGAGGAAATCTC---AGCA--GACA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAA-TAATGT-----TCT--C--------TTTATAATT-----GCCTTTCT-TTTCTTATAAC---TTTTCCTAGATGTTCGGCATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTTCA
droSim2 3l:15580703-15580814 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTCAATGTAAA-TAATGT-----TCT--C--------TTTATAATT-----GCCTTCCT-TTTCTTTCAAC---TTTTCCTAGATGTTCGGCATCGGCACGGAAAGCGTTAATCTAGGCCAGTTCAAGTTCCA
droSec2 scaffold_0:8061958-8062362 + TGCACTTTTGGGAGATGCGCGTAATCACGACTCTGGCCGGCACGGGATGTGGTTAGT---------------------ATCAGGC-------CGGCTTGGCAACTAGTTGG-GATGCTCAGC-------ATGATGAATGTCACTCAAAGTCGCCGCCTTAAAATAGAACACAACTAACC-AAGCATCTGGTGTGCTCGATTCCATTGGAGACGGCTTGATTGTTCGCTTCGTTGTATTATGGATTACAGATTACAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGAAGGAAATCTC---AGCA--GACA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAA-TAATGT-----TCT--C--------TTTATAATT-----GCCTTCCT-TTTCTTTCAAC---TTTTCCTAGATGTTTGGCATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCA
droYak3 v2_chr3L_random_104:907-1311 + TGCACTTTTGGGAAATGCGCGTCATCACGACTCTGGCCGGCACG-GATGTGGTTAGTG--------------------ACCAGCC-------CGGCTTAGCAACTAGTTGG-GATGCTCAGC-------GTGACGAAAGTCACTCAAAGTCGTCGCCTTAAAATAGAACACCACTAACC-AGGCATCTGGTGTACTCGATTCCATTGGAGACGGTTTGATTGTTCGCTTCATTGTATTTTGGATTACAGATTGTAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGGAGGAAATCTC---AGCA--GGCA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAA-TAATGC-----TCT--C--------TTTATAATT-----GTCTTCGT-TTTCTTTCAAC---TTTTCCTAGATGTTCGGCATCGGTACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCA
droEre2 scaffold_4784:18206147-18206548 + TGCACTTTTGGGAGATGCGCGTCATTACGACTCTGGCCGGCACG-GATGTGGTTAGTT--------------------ATCAGCC-------CGGCTTGGCAACTAGTTGG-AATGCTCAGC-------ATGACGAATGTCACTCAAAGTCGTC----TAAAATAGAACACTAGTAACC-AGGCATCTGGTGTACTCGATTCCATTGGAGACGACTTGATTGTTCGCCTCATTGTATTATGGATTACAGATTGCAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGGAGGAAGCCTG---AGCA--GACA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAAATAATGT-----TCT--T--------TTTATACTT-----GCCTTCCC-TTTCTTTCAAC---TTTTCCTAGATGTTCGGCATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGCACTTCTGGGAGATGCGCGTCATTACAGCGCTGGCAGGTACA-GATGTGGTAAGTTCTAGAG-----CAC--GGCAAATGCATCT-TAAGGG------------ATTAA-AATAGTCAGC-------GAGATAA-----------------------------------------------------------------------------------------------------------------GCTGCATTGTAAAGATAAGACAACAGGGACACACTTGTCACTGTCTGTCTGTT--TTGGCATGAGGAAATCGG---AGCATTGGTAGCCAGAAAC--CGAGTGGCTGAGTTGATAAGCAAATCATGTACCCCTCTCGAGTC--------GCGC-GCTTACAAAAAGGTCAATGCAAA-CATAATAG---TCC--C--AGTT--ATTACAATT-----TCTTTCTC-TGTCTCGTAAT---CTTTTCTAGATGTTTGGCATAGGCACTGACCGCGTTAATCTGGAACAATTTAAATTTCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTGACCGCGTTAATCTGG................2113.003001000000000000100000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAA-CATAATAG---TCC--C--AGT...................................................................................................2112.002000000000000000100000000001000000000000000000000000000000000000
.....TTCTGGGAGATGCGCGTCATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000001000000000001000000000000000000000000000000000
....CTTCTGGGAGATGCGCGTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCATAGGCACTGACCGC..........................2111.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGATGTTTGGCATAGGCAT.................................2211.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TCGG---AGCATTGGTAGCCAGAA..............................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CTGTCTGTT--TTGGCATGAGGA........................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTC-TGTCTCGTAAT---CTTT.......................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGGTCAATGCAAA-CATAATAG---TCC--C--AG....................................................................................................3111.001000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATGTTTGGCATAGGCACT................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----TCTTTCTC-TGTCTCGTAAT---...........................................................2111.001000000000000000000100000000000000000000000000000000000000000000
......TCTGGGAGATGCGCGTCATTACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATGTACCCCTCTCGAGTC--------GCG...................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCGCGTTAATCTGGAAC.............2111.001000000000000000000000000010000000000000000000000000000000000000
........................................TACA-GATGTGGTAAGTTCTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...ACTTCTGGGAGATGCGCGTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
......................................................AGTTCTAGAG-----CAC--GGCAAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ACCCCTCTCGAGTC--------GCGC-GCT..............................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-TGTCTCGTAAT---CTTTTCTAG..................................................2311.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................ATAAGACAACAGGGACACACT........................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGCATAGGCACTG...............................1911.001010000000000000000000000000000000000000000000000000000000000000
.....TTCTGGGAGATGCGCGTCATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................GGCAAATGCATCT-TAAGGG------------ATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGATGTTTGGCATAGGC...................................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGAGGAAATCGG---AGCATTGGT......................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CTGTCTGTCTGTT--TTGGCATG............................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AAATCATGTACCCCTCTCGAG................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............AGATGCGCGTCATTACAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
.....TTCTGGGAGATGCGCGTCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAT---CTTTTCTAGATGTTTGGC.........................................2211.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATGTACCCCTCTCGAGTC--------GCGC-.................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGCAAA-CATAATAG---TCC--.........................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGTTTGGCATAGGCAC.................................2111.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
TTCATTTCTGGGAAATGCGTATAATTACAGTGCTGGCTGGTACT-GATGTGGTAAGTTCTAGTG-----CATG-GGCAACTGCATCC-AAAGGG------------ATTCA-AATAGCTAGG-------GAGATAA-------------GCGCCACTTTAAAAGATAACACAGCT-GTA-ACGCACTTGA--------------------------------------------------------------------------------------CACAG-----------TCCGCCTGTCTCTCGGCATGAGGAAATCTGTGGTGCA----TAGTGAGTGA---TGAGTGA--GAGCTGATAAGCCAGTTGTGTATTCCT--ATTTTAACTCGGCCGCCCGGTTTATGAAAAGGTCAATGCAAA-CGTAATAA---T----TCCACTCG-GTTACTATTTATTTGTCTTTCCCTCTCTCTTAAT---ATTTTCTAGATGTTTGGCATAGGCACCGATAGTGTTAATCTGGAACAATTCAAATTCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................GTGAGTGA---TGAGTGA--GAGCTGATA........................................................................................................................................................................................24110.0010220015
.......................................................................................................................................................................................................................................................................................................................GAGGAAATCTGTGGTGCA----TAGTGAGTG..............................................................................................................................................................................................................2711.001000001
droGri2
TGCACTTCTGGGAGATGCGCGTCATCACAGTGCTGGCGGGCACA-GATGTGGTAAGTTCTAGAATAGAACACGCAGCAACTGCATCAGTCAGAG------------ATTGAGAACAGTCTAA---GGTTGAGATAA-------------GCAC----------------------------------------------------------------------------------------------------CACTTTGCCGATAAGACTA------------TGTCAA-----------------TCATGAGGAAATCTG---CTTA--GACA----------------------ATTGATAAGCAT-TCATATGAATATATAGAATAACAAAGTCA----TCTTACAAAAAGGTCAATGCAAA-AATAGT-----AGT--T-TAATTGAATTACTATCT----CTTTTACT-CTTATC---ATGTCATCATTCAGATGTTTGGCATTGGAACTGACAGCTTCAATTTGGAGCAGTTTAAATTTCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGCATTGGAACTG...............................1911.00110
........................TCACAGTGCTGGCGGGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.......................ATCACAGTGCTGGCGGGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
droWil2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTCAATGTAAA-TATT---------------------TTTCCATTT-----GTTTTCCC-CTTT----------ATCTCCTAGATGTTTGGCATCGGCACGGAAAATGTTAATTTGGAACAATTTAAATTCCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCATCGGCACGGAAAATG.........................2211.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCATCGGCACGGAAAATG.........................2311.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCCC-CTTT----------ATCTCCTAG..................................................2111.00101000
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATTA---------TTAAACTCAAATCCCGATT-----CCCTTTCC-CATCTCCCCCCCTTCTCCCATAGATGTTCGGCATAGGAACGGAGAGCGTTAATCTGGGGCAATTCAAGTTTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATAGGAACGGAGAGC..........................1811.0010000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................AATTA---------TTAAACTCAAATCCCG..........................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATAGGAACGGAGAG...........................1811.0010100000000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATTA---------TTAAACTCAAATCCCGATT-----CCCTTTCC-CATCTCCCCCCCTTCTCCCATAGATGTTCGGCATAGGAACGGAGAGCGTTAATCTGGGGCAATTCAAGTTTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGTTAATCTGGGGCAAT..........2111.001010000
droAna3
TGCACTTTTGGGAGATGCGAGTCATTACCGCACTGGCTGGAACA-GATGTGGTAGGTTGTCAGG-----TCG--GGTTATCACCCCT-TTAGTGGCTTGACAACCA-------ATGATT----------AAGATGAAAGTCAGTCAAAGTCGCTACACGAAAATAGAACA--ACTTGTA-GGGCATCTGGTGTGCTCGATTCCATTGGAAACGATTTAATTGTTCGCTCCATTGTA---CGGATTACAGATTACAATGAAGCGATAAGATATGAGAAGCAGACGCGT------------------CCAGAGAAGGAAATCTC---TCTA--GACA--------GCTCA-----ACTAGCTGATAAGCA-----------------------------------------GAAAAGTTCAATGTAAA-CATCGGTGTGTATTCTT--------ACAATAATC-----GGTTTCCT-CTTTCT--------TATCCCTAGATGTTCGGCATCGGTACCGGCAACGTCCACTTAGAGCAGTTCAAGTTCCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCCTAGATGTTCGGCATCGGT...................................2411.001000010
......................................................................................................................................................................................................................................................................GATAAGATATGAGAAGCAGACGCGT------------------CC.................................................................................................................................................................................................................................................2711.001010000
droBip1
TGCACTTCTGGGAGATGCGAGTCATCACCGCGCTGGCTGGCACA-GATGTGGTAGGTTCGCAGG-----TCG--GGTTATCACCCCT-TCAGCGGCTTGACAACC-------GATGATT----------AAGATGAAAGTCAGTCAAAGTCGCTACACGAAAATAGAACA--GCTTGTA-GGGCATCTGGTGTGCTCGATTCCATTCGAAACGATTTAATTGTTGGCTCCATTGTA---CGGATTACAGATTACAATGAAGCGATAAGATATGAGAAGCAGACGCGT------------------CCAGAGAAGGAAATCTC---TCTA--GACA--------GCTCA-----ACTAGCTGATAAGCA-----------------------------------------GAAAAGTTCAATGTAAA-CATCGGTGTGTATTCTT--------ACAATAATC-----GGCTTCCT-TTTTCT--------TATCCCTAGATGTTCGGCATCGGCACCGGTAGCATCAATTTGGAGCAGTTCAAGTTCCASizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGCAAA-CAATGT---GTGCT--C--------TTAACAATC-----TGCTTCCC-TGTTTTT---C---CTCTTCTAGATGTTCGGCATCGGCACTGAGAGCGTTAATCTAGGGCAGTTCAAGTTTCASizeHit CountTotal NormTotal
No Reads
droFic1
TTCACTTCTGGGAGATGCGCGTCATTACGACGCTGGCCGGCACA-GATGTGGTGAGCT--------------------ATCAACC-------CGGCTTGGCAACTATGTGG-GATGCACGGC-------GAGATGAATGTCAGTCAAAGTCGCCGTCTGAAAATAGAACGCTGCCTGCGGAGGCATCTGGTGTGCTCGATTCCATTGGCAACAACTTAATTGTTCGCACCATTGTACGCTAGATTACAGATTACAACGAAGCGATAAGATAACAGACGCGG------------------------CGGGACGAGGAAATCTC---GGCA--GACA--------GCCCA-----ACTAGATGATAAGCCAGA---------------------------------------AAAAGTTCAATGTAAA-CAATGT-----TTT--C--------TTTTTAATC-----GGCTTCCC-TTTTCT----C---TTCTCCTAGATGTTTGGCATCGGCACGGAAAGCGTAAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotal
No Reads
droEle1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATGT---------------------------------GTCTTCCC-TTTTTT--------CCGCCTTAGATGTTCGGGATCGGAACGGAGAGCGTTAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATGT-----GTT--C--------TTAATAATC-----GCCTTCCC-TTTT----------TTCTCCTAGATGTTCGGGATCGGGACGGAGAGCGTTAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotal
No Reads
droBia1
TCCACTTCTGGGAGATGCGCGTCATCACGACTCTGGCCGGCACA-GATGTGGTGAGTT--------------------ATCAGCC-------CGGCTTGGCAACTAGTTGG-GATGCTCCGC-------GAGATGAATGTCAGTCAAAGTCGCCGCCTTAAAATAGATCACCGCCTGCT-AGGCATCTGGTGTGCCGGATTCCATTGCTTACGGCTTGATTGTTCACTTTATTGTACTACGGATTACAGATTACAAGGCGGCGATAAGATAAGAGACGCAG------------------------CGGGTGGGGTTAAACTC---GGCA--GACA--------GTCCA-----ACTAGATGATAAGCCAGC---------------------------------------AAAAGTTCAATGTAAA-CAATGT-----GTT--C--------TTTATAATC-----TCCTTCCC-TTTTC---------TCCTCTTAGATGTTCGGGATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotal
No Reads
droTak1
TCCACTTTTGGGAGATGCGCGTCATCACCACTCTGGCCGGCACC-GATGTGGTGAGTT--------------------ATCAGCC-------CGGCTTGGCAACTAGTTGG-GATGCTCCGCTAGA---GAGATGAAAGTCAGTCAAAGTCGCCGCCTTAAAATAGATCACTGCCTA------CAGCTGGTGAGCTCGATTCCATTGCTTACGACTCGATTGTTGGCTTCATTGTATTACGGATTACAGATTACAAGGCGGCGATAAGATAACAGACG----------------------------------------TCGC---AGCA--GACA--------GCCCA-----ACTAGATGATAAGCCAGT--------------------------------------GAAAAGTTCAATGTAAA-CAATGT---GTTC---------------------------CCTT-----CTCCA--------TCCCCCTAGATGTTCGGCATCGGCACGGAGAGCGTTAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotal
No Reads
droEug1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTCAATGTAAA-CAATAC---G-TCT--C--------TTTGTAATC-----GGCTTCCC-TTTT-------------TTCTAGATGTTCGGCATCGGTACGGAGAGCGTTAATCTAGGGCAATTCAAGTTCCASizeHit CountTotal NormTotal
No Reads
dm3
TGCACTTTTGGGAGATGCGCGTCATCACGACTCTGGCCGGCACG-GATGTGGTTAGTT--------------------ATCAGGC-------CGGCTTGGCAACTAGTTGG-GATGCTCAGC-------ATGATGAATGTCACTCAAAGTCGCCGCCTTAAAATAGAACACAACTAACC-AGGCATCTGGTGTGCTCGTTTCCATTGGAGACGACTTGATTGTTCGCTTCGTTGTATTATGGATTACAGATTACAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGGAGGAAATCTC---AGCA--GACA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAA-TAATGT-----TCT--C--------TTTATAATT-----GCCTTTCT-TTTCTTATAAC---TTTTCCTAGATGTTCGGCATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................TGAATGTCACTCAAAGTCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................21111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AATGTCACTCAAAGTCGCCGC........................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTGGGAGATGCGCGTCATCACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCACTTTTGGGAGATGCGCGTCATCACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GTGTGCTCGTTTCCATTGGAG..................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTAATCTAGGGCAGTTCA.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TAAGATAACAGACGCAG------------------------CGGGAGGAGA.........................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
......................CATCACGACTCTGGCCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TACAGATTACAACGCGGCGAT...........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000
..................................................................................................................................................................................................................................................ATTACAGATTACAACGCGGCG.............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................GTTCGCTTCGTTGTATTATGG..................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............TGCGCGTCATCACGACTCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCTAGGGCAGTTCAAGT....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---TTTTCCTAGATGTTCGGC.........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCACGACTCTGGCCGGCACG-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAGTCGCCGCCTTAAAATAGA.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ATGAATGTCACTCAAAGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GATGCGCGTCATCACGACTCTGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAGACGCAG------------------------CGGGAGGAGG.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATCACGACTCTGGCCGGCACG-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GGAAATCTC---AGCA--GACA--------CCCCA-----...................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GGCATCTGGTGTGCTCGTTTCCATTGGA...................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATCTAGGGCAGTTCA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAGGGCAGTTCAAGTT...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCACGGAAAGCGTTAATCTA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................ATGGATTACAGATTACAACGC.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTTTGGGAGATGCGCGTCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TCCATTGGAGACGACTTGATT.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGGAAAGCGTTAATC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................TGATTGTTCGCTTCGTTGTA........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTGGGAGATGCGCGTCATCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATGTCACTCAAAGTCGCCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CC-AGGCATCTGGTGTGCTCG..............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACTAGTTGG-GATGCTCAGC-------ATC................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTGGGAGATGCGCGTCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................ACACAACTAACC-AGGCATCTGGTG....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................TAGTT--------------------ATCAGGC-------CGGCTTGGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACTTTTGGGAGATGCGCGTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................GACTTGATTGTTCGCTTCGTTGTATT......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AACAGACGCAG------------------------CGGGAGGAGG.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................GACTCTGGCCGGCACG-GATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GAAATCTC---AGCA--GACA--------CCCCA-----A..................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGCGCGTCATCACGACTCTGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTCGCTTCGTTGTATTATGGATTACAG...........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GGAGGAGGAAATCTC---AGCA--GA.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGCGTTAATCTAGGGCT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTCGCTTCGTTGTATTATGGATT...............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................ATTGGAGACGACTTGATTGTT....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........................................................................................................TTGG-GATGCTCAGC-------ATGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCACTTTTGGGAGATGCGCGTCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................GCTTGGCAACTAGTTGG-GATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
................................................GTGGTTAGTT--------------------ATCAGGC-------CGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TGCTCAGC-------ATGATGAATGTCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAAAGCGTTAATCTAGGG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CAGC-------ATGATGAATGTCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TTGGAGACGACTTGATTGTTC...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTATAAC---TTTTCCTAGATG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CTAGATGATAAGCCAGC---------------------------------------TAA.......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GCTCAGC-------ATGATGAATGT........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................CG-GATGTGGTTAGTT--------------------ATCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GGAGACGACTTGATTGTTCGC.................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGGAAAGCGTTAATCTA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................A--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------T.........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TC---AGCA--GACA--------CCCCA-----ACTAGATGATAA.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGTTAATCTAGGGCAGTTC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGGAAAGCGTTAATCTAGGGC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CTAACC-AGGCATCTGGTGTGC.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GCGATAAGATAACAGACGCAG------------------------CG.................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC---TTTTCCTAGATGTTCGGC.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....TTTTGGGAGATGCGCGTCATCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AGAACACAACTAACC-AGGCAT..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGGCATCTGGTGTGCTCGTTT...........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ATCTGGTGTGCTCGTTTCCAT.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCAGTTCAAGTTTCA1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCTGGTGTGCTCGTTTCCATT......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATTGTTCGCTTCGTTGTATTATGG..................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATCTAGGGCAGTTCAAG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................CTTGGCAACTAGTTGG-GATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTTTGGGAGATGCGCGTCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTCGCTTCGTTGTATTATGGA.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAAA-TAATGT-----TCT--C--------TTTA............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGTTAATCTAGGGCAGTTCA.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................CTTGATTGTTCGCTTCGTTGT.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGCAGTTCAAGTTTCA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGTTCGGCATCGGCACGG...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCATCGGCACGGAA.............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTAAA-TAATGT-----TCT--C--------TT..............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGGAAAGCGTTAATCTAG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGCATCGGCACGGCG.............................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTCAATGTAAA-TAATGT-----TCT--C--------TTTATAATT-----GCCTTCCT-TTTCTTTCAAC---TTTTCCTAGATGTTCGGCATCGGCACGGAAAGCGTTAATCTAGGCCAGTTCAAGTTCCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCGGCACGGAAAGCG.........................2012.00210000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTAGATGTTCGGCATCG.....................................2012.00220000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTAATCTAGGCCAGTT.........2011.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGT-----TCT--C--------TTTATAATT-----GCCT..............................................................................2111.00101000000000000000
droSec2
TGCACTTTTGGGAGATGCGCGTAATCACGACTCTGGCCGGCACGGGATGTGGTTAGT---------------------ATCAGGC-------CGGCTTGGCAACTAGTTGG-GATGCTCAGC-------ATGATGAATGTCACTCAAAGTCGCCGCCTTAAAATAGAACACAACTAACC-AAGCATCTGGTGTGCTCGATTCCATTGGAGACGGCTTGATTGTTCGCTTCGTTGTATTATGGATTACAGATTACAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGAAGGAAATCTC---AGCA--GACA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAA-TAATGT-----TCT--C--------TTTATAATT-----GCCTTCCT-TTTCTTTCAAC---TTTTCCTAGATGTTTGGCATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................TGGAGACGGCTTGATTGTTCGC.................................................................................................................................................................................................................................................................................................................................2211.0010001
...................................................................................................................................GATGAATGTCACTCAAAGTCGCCGCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
......................AATCACGACTCTGGCCGGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...................................................................................GC-------CGGCTTGGCAACTAGTTGG-....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGTTTGGCATCGGCACGG...............................2111.0011000
..............ATGCGCGTAATCACGACTCTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...............TGCGCGTAATCACGACTCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..........................................................................................................................................................................................................................................................................................................................................................CA-----ACTAGATGATAAGCCAGC---------------------------------------TA........................................................................................................................................2211.0010100
...........................................................................................................TTGG-GATGCTCAGC-------ATGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATCGGCACGGAAAGCGT........................2111.0011000
..........................................................................................................................................................................................................................ATTGTTCGCTTCGTTGTATT......................................................................................................................................................................................................................................................................................................................2011.0010100
.................................................................................................................................................................................................................................................................................................................................................................ACTAGATGATAAGCCAGC---------------------------------------TAA.......................................................................................................................................2111.0010100
......................................................................................................................CAGC-------ATGATGAATGTCACT....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................GTCGCCGCCTTAAAATAGAACA..........................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCATCGGCACGGAAAGCGTT.......................2411.0011000
.................................................................................................................ATGCTCAGC-------ATGATGAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
droYak3
TGCACTTTTGGGAAATGCGCGTCATCACGACTCTGGCCGGCACG-GATGTGGTTAGTG--------------------ACCAGCC-------CGGCTTAGCAACTAGTTGG-GATGCTCAGC-------GTGACGAAAGTCACTCAAAGTCGTCGCCTTAAAATAGAACACCACTAACC-AGGCATCTGGTGTACTCGATTCCATTGGAGACGGTTTGATTGTTCGCTTCATTGTATTTTGGATTACAGATTGTAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGGAGGAAATCTC---AGCA--GGCA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAA-TAATGC-----TCT--C--------TTTATAATT-----GTCTTCGT-TTTCTTTCAAC---TTTTCCTAGATGTTCGGCATCGGTACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................GATTACAGATTGTAACGCGG...............................................................................................................................................................................................................................................................................................2011.00101000000000
..............................................................................................................................................................................................................................................................................AACAGACGCAG------------------------CGGGAGGAGGAAA......................................................................................................................................................................................................................................2411.00100000010000
......................................................................................................................................................................................................................................................................GATAAGATAACAGACGCAG------------------------CGGGAG.............................................................................................................................................................................................................................................2511.00100000010000
............................................................................................CGGCTTAGCAACTAGTTGG-....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGTTAATCTAGGGC.............1911.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTAGATGTTCGGCATCG.....................................2111.00101000000000
......TTTGGGAAATGCGCGTCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEre2
TGCACTTTTGGGAGATGCGCGTCATTACGACTCTGGCCGGCACG-GATGTGGTTAGTT--------------------ATCAGCC-------CGGCTTGGCAACTAGTTGG-AATGCTCAGC-------ATGACGAATGTCACTCAAAGTCGTC----TAAAATAGAACACTAGTAACC-AGGCATCTGGTGTACTCGATTCCATTGGAGACGACTTGATTGTTCGCCTCATTGTATTATGGATTACAGATTGCAACGCGGCGATAAGATAACAGACGCAG------------------------CGGGAGGAGGAAGCCTG---AGCA--GACA--------CCCCA-----ACTAGATGATAAGCCAGC---------------------------------------TAAAGTTCAATGTAAAATAATGT-----TCT--T--------TTTATACTT-----GCCTTCCC-TTTCTTTCAAC---TTTTCCTAGATGTTCGGCATCGGCACGGAAAGCGTTAATCTAGGGCAGTTCAAGTTCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCTAGGGCAGTTCAAGT....2111.0010000010
..................................................................................................................................................................ATAGAACACTAGTAACC-AGGC............................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........................TACGACTCTGGCCGGCACG-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................GATTACAGATTGCAACGCGGC..............................................................................................................................................................................................................................................................................................2111.0010000100
..................................................................................................GGCAACTAGTTGG-AATGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCTAGGGCAGTTCAAG.....2011.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGGCATCGGCACGGA..............................1911.0010000100

Generated: 05/17/2015 at 05:04 AM