ID:

dvi_19933

 Coordinate:

scaffold_13049:14348989-14349225 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.6 -9.2 -9.0 -8.9

Flybase annnotation

CDS [Dvir\GJ11797-cds]; CDS [Dvir\GJ11797-cds]; exon [dvir_GLEANR_11810:2]; exon [dvir_GLEANR_11810:1]; intron [Dvir\GJ11797-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CATTTTATGGCAAGGGACTACTGCTGGAAAACGAAATTCTGAAAGTGAATGTGAGTCAACAATTAAAATAATGAAATTGTGTTGCGGGCAAGGGCAAACAATTAAACATCAAATGTCAACATGCTGGCTATAAGAAGCAGACAACCACGATTCGATACATTGATAACTCTATTGTGTTTAGTGGGGTAACATTGGCATCAATAATGTAGAGGTTCGCAACACTGTTTTTCAAATTTTAGATAACTTTGTTAATAATTTCAATAATAATATAATGGGTCTTTGTTCAGAGTGCGGCATTGTCGAAGTTGTTACCATGGCTTTGCAAGGCGCCATGCAT
********************************************************************..........((...(((......((((.................))))....)))..))***************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060674
9x140_ovaries_total
 V116
male body		 SRR060677
Argx9_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060656
9x160_ovaries_total
 SRR060657
140_testes_total
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060683
160_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106714
embryo_2-4h
 SRR1106715
embryo_4-6h
 SRR1106722
embryo_10-12h
 SRR1106728
larvae
 V047
embryo
 SRR060658
140_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060670
9_testes_total
 SRR060687
9_0-2h_embryos_total
.....................................TCTGAAAGTGAATGTGAGTCA....................................................................................................................................................................................................................................................................................... 21 0 1 3.00 3 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TAATGAAATTGTGTTGCGGGC........................................................................................................................................................................................................................................................ 21 0 1 3.00 3 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AAATTGTGTTGCGGGCAAGGG................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TGGGTCTTTGTTGAGGGTGCGGC.......................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................GTTGCGGGCAAGGGCAAACA............................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCAAATGTCAACATGCTGGC................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TAATGAAATTGTGTTGCGG.......................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTATGGCAAGGGACTACTGCTGGAAAATGAAATTCTGAAAGT................................................................................................................................................................................................................................................................................................... 42 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................GGTCTTTGTTCGGAGTGCGGC.......................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AAACATCAAATGTCAACATGC..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..TTTTATGGCAAGGGACTACTG.......................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CATCAAATGTCAACATGCTGG.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AATGTCAACATGCTGGCT................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ATGTAGAGGTTCGCAACACTG................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TATGGCAAGGGACTACTGCTG....................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAGGGACTACTGCTGGAAAA.................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACTGCTGGAAAACGAAATTCT......................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................TAATAATATAATGAGTCTTT........................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................ATTGTGTTGCGGGCAAGGGCAA................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................TAATGGGTCTTTGTTCAG.................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................TACCATGGCTTTGCAGGGCGC....... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AAATTGTGTTGCGGGCAAG..................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................TGCCATGGCTTTGCAAGGCGC....... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AAAATGAAATTCTGAAAGTGA................................................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................ACTCTGTTGTGTTTGGTGGG........................................................................................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AAAATAATGAAATTGTGTTGC............................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TTTATGGCAAGGGACTACTTC......................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTGTGTTTGGTGGGGTAACAT................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AACTCTATTGTGTTTAGTGGG........................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AAATTGTGTTGCGGGCAGGG.................................................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATAATGAAATTGTGTTGCGGG......................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................TAATATAATGGGTCTTTGTTCA................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATTGGCATCAATGATGTAGAG.............................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTGGCATCAATAATGTAGAGG............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATAAGAAGCAGACAACCACGA........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TTGTTCGGAGTGCGGCATTGTC.................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AAACAATTGGACATCAAATGT............................................................................................................................................................................................................................. 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAGCGACTGCTGCTGCAAAACGA............................................................................................................................................................................................................................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................TTAAACATCAAACGTCTACA........................................................................................................................................................................................................................ 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................ATAATGAAATTGTGTTGCGGTTT....................................................................................................................................................................................................................................................... 23 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................CGGGTCTTGGTTCAGGGTGC............................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CAATGGACTACTGGAGGAAAA.................................................................................................................................................................................................................................................................................................................. 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TCTATTGTGTTGAGTGTG........................................................................................................................................................ 18 2 18 0.22 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0
................................................................................................................................................................................................................................................................................TGGGGCTTTGTTCATCGTGC............................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GTCTATGGTGGGGTAACAT................................................................................................................................................. 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CAAAACGAGATTCTGTAAGT................................................................................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................AATGGAGAGCTTCGCAGCA.................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................TGAGGCATCGTCGATGTTG............................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GATGTAGAGGTTGGTAACA.................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTAAAATACCGTTCCCTGATGACGACCTTTTGCTTTAAGACTTTCACTTACACTCAGTTGTTAATTTTATTACTTTAACACAACGCCCGTTCCCGTTTGTTAATTTGTAGTTTACAGTTGTACGACCGATATTCTTCGTCTGTTGGTGCTAAGCTATGTAACTATTGAGATAACACAAATCACCCCATTGTAACCGTAGTTATTACATCTCCAAGCGTTGTGACAAAAAGTTTAAAATCTATTGAAACAATTATTAAAGTTATTATTATATTACCCAGAAACAAGTCTCACGCCGTAACAGCTTCAACAATGGTACCGAAACGTTCCGCGGTACGTA
*****************************************************************************************************************************************************************************************************************..........((...(((......((((.................))))....)))..))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060677
Argx9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060679
140x9_testes_total
 M047
female body
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 M061
embryo
 SRR060658
140_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060678
9x140_testes_total
 SRR060689
160x9_testes_total
 SRR1106729
mixed whole adult body
 V047
embryo
 V053
head
 SRR060666
160_males_carcasses_total
 V116
male body		 SRR060687
9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body		 SRR060663
160_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
.............................................................................................................TTTTACAGTTGTACGACCGATA.............................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CCTGATGACGACCTTTTGC................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................CCTTTTGCTTTAAGACTTTCACT................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................TCACGCCGTAACAGCTTCAAC............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................AGTCTCACGCCGTAACAGCTT................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................TTTTGCTTTAAGACTTTCACT................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CGATATTCTTCGTCTGTTGGT.............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................TGATGACGACCTTTTGCTTTA............................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATCTCCAAGCGTTGTGACGA............................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGTTAATTTGTAGTTTACAGT........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................AGCTTCAACAATGGTACCGGA................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CTGATGACGACCTTTTGCTTTAA........................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CGTTCCCTGATGACGACCTTT................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGTTGGTGCTAAGCTATGTAA................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................GGTACCGAAACGTTCTGCGGT..... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CGACCTTTTGCTTTAAGACTT...................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................CCGTTCCCGTTTGTTAATT........................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATCTCCAAGCGTTGTGACAAA.............................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GATATTCTTCACCTATTGG............................................................................................................................................................................................... 19 3 20 0.45 9 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 3 0 0 0 0 1 1 0
...........................................................................................................................................................................................................................................................................................................AGCTTCAACGGTGGTACCG................... 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GTAGTTTCCAGTTGTACAA.................................................................................................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ACCCGATTGTTGCCGTAGTT........................................................................................................................................ 20 3 18 0.11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
...........................................................................................................TAGTTTAAAGTTGTACGACGGT................................................................................................................................................................................................................ 22 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................TTCGGCGTCTGTTGGTGC............................................................................................................................................................................................ 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................GTCTGTTGGTGCGACGGTAT.................................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGCATCCCCAAGAGTTGT.................................................................................................................... 18 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................AGAAGTCTGAGGCCGTAAC...................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................GCAGCTTAAAGTTGTACGA.................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:14348939-14349275 - dvi_19933 CATTTTATGGCAAGGGACTACTGCTGGAAAACGAAATTCTGAAAGTGAATGTGAGTCAACAATTAAAATAATGAAATTGTGTTGCGGGCAAGGGCAAACAATTAAAC--AT-CAAATGTCAACATGCTGGCTATAAGAAGCAGACAACCACGATTCGATACATTGATAACTCTAT--TGTGTTTAGTGGGGTAACATTGGCATCAATAATGTAGAGGT------------TCGCAACACTGTTTTTCAAATTTTAGATAAC---------TTTGTTAATAATTTCAATAATAATATAATGGGTCTTTGTTCAGAGTGCGGCATTGTCGAAGTTGTTACCATGGCTTTGCAAGGCGCCATGCAT
droMoj3 scaffold_6680:12942933-12943234 + CATTTTATGGTAAAGGATTACTACTAGAAAATCAAATTCTTAAAGTAAACGTGAGTCAATAT---------TACAACTGTGTTTCGAGATAGGGCAAACAGTTAAGCGACT-CTACTGTCAATATGTTGTC--TAAG---CAGACGGGCAGAA--CGATATATCGATAATTCTGT--T--GTCTGCTAGGGCAACATTGCTCTAATTAC----T-------------------CAACACTGATGTTTAACTTGT-G---ATTTTATTAAAGTTCGTGAATTT----------TCATCA---ATTTTTACGCAGTCCCACGAATTGAACAAACTATTACCATGGCTCTGCAAGACGCCCCGCAC
droGri2 scaffold_15110:15875419-15875721 + CATTTTATGGCAAAGCATTGCTGCTGGAAAATGAAGTTCTCAAAGCAAACGTGAGTCATCAATTGA------------------------ATAACAAACAAATAAAATAATCCGAATGTAAAAACTTTG-CTATAAGCAGCAGAAAAAGATTGTACGATATGTCGATAACTTTTTTTTATGTACAATAGGGAAACATTGGCATGAATAA----TACGTTTGCTTATGGTGTTGCAACACTGTCTTTTAAATTTCTGA------------------TATTTTC----------G-ATGGC--TTTTGGTTTCAGTCCACAGCATTAAGCCGATTGCTGCCATGGCTTTGTCAGACACCACGAAT
droWil2 scf2_1100000004768:900738-900822 - TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTTAAATTAAACA--------------------------------------------GAT--TTTATTTTATAGGTTGCAGCTCTGCCGGAACTTTTGGAGTGGCTATGTCAGGCGCCTAGTTT
dp5 XR_group6:3022028-3022133 - GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACTGGTTTTCAAATATTA-------------AAACTGTTGATCTC----------ATATAAT--GTTTTTATTCAGTCGGCAGCTGTGTCGCAACTTTTGGAATGGCTCTGTCGGACTCCACGTGT
droPer2 scaffold_9:1314916-1315021 - GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACTGGTTTTCAAATATTA-------------AAACTGTTGATCTC----------ATATAAT--GTTTTTATTCAGTCGGCGGCTGTGTCGCAACTTTTGGAATGGCTCTGTCGGACTCCACGTGT
droAna3 scaffold_13337:22598423-22598446 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTCTGCGTTGCACCACGAAC
droBip1 scf7180000396426:218001-218024 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTCTGCGTTGCACCACGAAC
droKik1 scf7180000302695:153229-153290 - GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCTAGACTGCCGGTCTTGCCCCACTCCTTGAATGGCTGTGCCTGACGCCCCGGGT
droFic1 scf7180000453830:150486-150558 - TATAATTTGTCAA---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCTAGTCGGCTGCACTTGCTCCACTGCTAGAATGGTTATGCCTGACACCAAAAGT
droEle1 scf7180000490635:15126-15178 + CGTTTTTGGGTAG---TCCCCTGCTGGAGGGCGAGATCCTGAAAGTGAATGTAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779806:28314-28366 - CGTTTTTGGGGAG---TCCTCTGTTGGAAAGCGAGATCCTGAAAGTGAATGTAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302377:1805232-1805293 + GCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCCCAGTCAGCGGCGCTTGCTCCACTGCTGGAGTGGCTGTGCCGGACGCCCAAAGT
droTak1 scf7180000415388:194603-194659 - CATTTTTAGGGAA---CCCCCTGCTGGAAGCCGAGATCCTGAAAGTGAATGTAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC
droEug1 scf7180000409801:448626-448678 + CATTTTGGGGGAA---TCCCCTCATAGAGGGCGAAATTCTAAAAGTGAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:22865486-22865584 + AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGGCTTGCAAATTTTATT------------AACTGTTAATT----------------CCT--GGTTTTGTCAAGTCTGCTGCACTTGCTCCGCTGTTGGAATGGCTGTGCCTTACTCCCAAAGT
droSim2 3l:22351688-22351740 + CATTTTTGGGGAA---CCCGCTGCTGGAAGCCGATATCCTTAAAGTAAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_11:2766149-2766201 + CATTTTTGGGGAA---CCCGCTGCTGGAAGCCGATATCCTTAAAGTGAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:23339877-23339929 + CATTGTTGGGAAA---ACCGCTTTTGGAAGCCGATATCCTTAAAGTGAATGTACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:22507033-22507085 + CATTTTTGGGAAA---TCCGCTGCTGGAAGCCGATATCCTTAAAGTGAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CATTTTATGGCAAGGGACTACTGCTGGAAAACGAAATTCTGAAAGTGAATGTGAGTCAACAATTAAAATAATGAAATTGTGTTGCGGGCAAGGGCAAACAATTAAAC--AT-CAAATGTCAACATGCTGGCTATAAGAAGCAGACAACCACGATTCGATACATTGATAACTCTAT--TGTGTTTAGTGGGGTAACATTGGCATCAATAATGTAGAGGT------------TCGCAACACTGTTTTTCAAATTTTAGATAAC---------TTTGTTAATAATTTCAATAATAATATAATGGGTCTTTGTTCAGAGTGCGGCATTGTCGAAGTTGTTACCATGGCTTTGCAAGGCGCCATGCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................TCTGAAAGTGAATGTGAGTCA.................................................................................................................................................................................................................................................................................................................2113.003000000000000000001000000000001000000000100000000000000000000000
....................................................................TAATGAAATTGTGTTGCGGGC..................................................................................................................................................................................................................................................................................2113.003000000000010000000000100000000001000000000000000000000000000000
.........................................................................AAATTGTGTTGCGGGCAAGGG.............................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
................................................................................GTTGCGGGCAAGGGCAAACA.......................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................AT-CAAATGTCAACATGCTGGC........................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................TAATGAAATTGTGTTGCGG....................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................AAAC--AT-CAAATGTCAACATGC............................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
..TTTTATGGCAAGGGACTACTG....................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................C--AT-CAAATGTCAACATGCTGG.........................................................................................................................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................AATGTCAACATGCTGGCT.......................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................ATGTAGAGGT------------TCGCAACACTG..........................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.....TATGGCAAGGGACTACTGCTG.................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
...........AAGGGACTACTGCTGGAAAA............................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
...................ACTGCTGGAAAACGAAATTCT...................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................ATTGTGTTGCGGGCAAGGGCAA..........................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TAATGGGTCTTTGTTCAG..................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................AAATTGTGTTGCGGGCAAG...............................................................................................................................................................................................................................................................................1911.001000000000000000000000000000100000000000000000000000000000000000
................................................................AAAATAATGAAATTGTGTTGC......................................................................................................................................................................................................................................................................................2111.001000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AACTCTAT--TGTGTTTAGTGGG.............................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...................................................................ATAATGAAATTGTGTTGCGGG...................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TAATATAATGGGTCTTTGTTCA...................................................2211.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................TTGGCATCAATAATGTAGAGG..................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................ATAAGAAGCAGACAACCACGA..................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................ATAATGAAATTGTGTTGCGGTTT.................................................................................................................................................................................................................................................................................2330.331000000000000000000000000000100000000000000000000000000000000000
droMoj3
CATTTTATGGTAAAGGATTACTACTAGAAAATCAAATTCTTAAAGTAAACGTGAGTCAATAT---------TACAACTGTGTTTCGAGATAGGGCAAACAGTTAAGCGACT-CTACTGTCAATATGTTGTC--TAAG---CAGACGGGCAGAA--CGATATATCGATAATTCTGT--T--GTCTGCTAGGGCAACATTGCTCTAATTAC----T-------------------CAACACTGATGTTTAACTTGT-G---ATTTTATTAAAGTTCGTGAATTT----------TCATCA---ATTTTTACGCAGTCCCACGAATTGAACAAACTATTACCATGGCTCTGCAAGACGCCCCGCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................TTCTGT--T--GTCTGCTAGGGCAC.........................................................................................................................................................................2111.001010000
.........................................................................................................................................................................TTCTGT--T--GTCTGCTAGGGCAA.........................................................................................................................................................................2111.001001000
..............................................................................................................................................................................T--T--GTCTGCTAGGGCAACATTGC...................................................................................................................................................................2211.001000010
droGri2
CATTTTATGGCAAAGCATTGCTGCTGGAAAATGAAGTTCTCAAAGCAAACGTGAGTCATCAATTGA------------------------ATAACAAACAAATAAAATAATCCGAATGTAAAAACTTTG-CTATAAGCAGCAGAAAAAGATTGTACGATATGTCGATAACTTTTTTTTATGTACAATAGGGAAACATTGGCATGAATAA----TACGTTTGCTTATGGTGTTGCAACACTGTCTTTTAAATTTCTGA------------------TATTTTC----------G-ATGGC--TTTTGGTTTCAGTCCACAGCATTAAGCCGATTGCTGCCATGGCTTTGTCAGACACCACGAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTTAAATTAAACA--------------------------------------------GAT--TTTATTTTATAGGTTGCAGCTCTGCCGGAACTTTTGGAGTGGCTATGTCAGGCGCCTAGTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................TTGGAGTGGCTATGTCAGGCGCCTAGT..2711.00101000
.............................................................................................................................................................................................................................................................................................................................CAGCTCTGCCGGAACTTTTG..........................2011.00101000
dp5
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACTGGTTTTCAAATATTA-------------AAACTGTTGATCTC----------ATATAAT--GTTTTTATTCAGTCGGCAGCTGTGTCGCAACTTTTGGAATGGCTCTGTCGGACTCCACGTGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................AATATTA-------------AAACTGTTGATCTC----------.......................................................................2112.0020000000200
droPer2
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACTGGTTTTCAAATATTA-------------AAACTGTTGATCTC----------ATATAAT--GTTTTTATTCAGTCGGCGGCTGTGTCGCAACTTTTGGAATGGCTCTGTCGGACTCCACGTGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................ATGGCTCTGTCGGACTCCAC....2011.001100000
droAna3
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTCTGCGTTGCACCACGAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTCTGCGTTGCACCACGAACSizeHit CountTotal NormTotal
No Reads
droKik1
GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCTAGACTGCCGGTCTTGCCCCACTCCTTGAATGGCTGTGCCTGACGCCCCGGGTSizeHit CountTotal NormTotal
No Reads
droFic1
TATAATTTGTCAA---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCTAGTCGGCTGCACTTGCTCCACTGCTAGAATGGTTATGCCTGACACCAAAAGTSizeHit CountTotal NormTotal
No Reads
droEle1
CGTTTTTGGGTAG---TCCCCTGCTGGAGGGCGAGATCCTGAAAGTGAATGTAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CGTTTTTGGGGAG---TCCTCTGTTGGAAAGCGAGATCCTGAAAGTGAATGTAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCCCAGTCAGCGGCGCTTGCTCCACTGCTGGAGTGGCTGTGCCGGACGCCCAAAGTSizeHit CountTotal NormTotal
No Reads
droTak1
CATTTTTAGGGAA---CCCCCTGCTGGAAGCCGAGATCCTGAAAGTGAATGTAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCSizeHit CountTotal NormTotal
No Reads
droEug1
CATTTTGGGGGAA---TCCCCTCATAGAGGGCGAAATTCTAAAAGTGAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGGCTTGCAAATTTTATT------------AACTGTTAATT----------------CCT--GGTTTTGTCAAGTCTGCTGCACTTGCTCCGCTGTTGGAATGGCTGTGCCTTACTCCCAAAGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................TTGCTCCGCTGTTGGAATGGC...................21122.00220000000000000000020000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100150000000000000000000010010000020000000000000000000000000000000000000000000000000000000100000200000000000010000000010000000000000000000000000000000000000000100100000010
...............................................................................................................................................................................................................................................................................................................TTTTGTCAAGTCTGCTGCACT.......................................21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................T--GGTTTTGTCAAGTCTGCTGC..........................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000121100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................CTCCGCTGTTGGAATGGCTGT................2118.0080000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000001000002000000000000000
.................................................................................................................................................................................................................................................................................................................................ACTTGCTCCGCTGTTGGAATG.....................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................T--GGTTTTGTCAAGTCTGCTG...........................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CTTGCTCCGCTGTTGGAATGG....................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CTGCACTTGCTCCGCTGTTGG.........................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CAAGTCTGCTGCACTTGCTCC.................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CACTTGCTCCGCTGTTGGAAT......................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................................................................................................................................................................................CTGTTAATT----------------CCT--GGTTTTGTC.....................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................TCCGCTGTTGGAATGGCTGTG...............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTATT------------AACTGTTAATT----------------CCT--GG............................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................T----------------CCT--GGTTTTGTCAAGTCTGC.............................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CT--GGTTTTGTCAAGTCTGCTG...........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CCGCTGTTGGAATGGCTGT................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTCCGCTGTTGGAATGGCTGTGCCT............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TAATT----------------CCT--GGTTTTGTCAAGT.................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TCCGCTGTTGGAATGGCTG.................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000
............................................................................................................................................................................................................................................................................................................................................TGTTGGAATGGCTGTGCCT............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AATT----------------CCT--GGTTTTGTCAAGTC................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGCTCCGCTGTTGGAATGGCTGTGCCT............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GTTTTGTCAAGTCTGCTGCAC........................................2112.0020000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................ACTTGCTCCGCTGTTGGAATGGC...................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCTCCGCTGTTGGAATGGCTG.................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGTTGGAATGGCTGTGCCTTACTC.......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CTTGCTCCGCTGTTGGAATGGCTGTG...............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCACTTGCTCCGCTGTTGGAATGGCTGT................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AGTCTGCTGCACTTGCTCCGC...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTTGGAATGGCTGTGCCTT...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTTTGTCAAGTCTGCTGCACTT......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTGGAATGGCTGTGCCTTACT........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCACTTGCTCCGCTGTTGGAATGGCT..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGCTCCGCTGTTGGAATGGCTGTG...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTCCGCTGTTGGAATGGC...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CCGCTGTTGGAATGGCTGTG...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ACTGTTAATT----------------CCT--GGTTTTGTCA....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TT----------------CCT--GGTTTTGTCAAGTCTGCTGCAC........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGGAATGGCTGTGCCTTACTC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GCTGCACTTGCTCCGCTGTTGGAATGGCT..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CT--GGTTTTGTCAAGTCTGCTGC..........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCTGTTGGAATGGCTGTGCC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CACTTGCTCCGCTGTTGGAATGGC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCTCCGCTGTTGGAATGGCTGTG...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................TGCTCCGCTGTTGGAATGGCTG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TCTGCTGCACTTGCTCCGCTGTT...........................2311.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTCCGCTGTTGGAATGGCTGTG...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................................................................................................................................................................................CT--GGTTTTGTCAAGTCTGCTGCA.........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................T----------------CCT--GGTTTTGTCAAGTCTGCTGC..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GGCTGTGCCTTACTCCCAAA..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGCACTTGCTCCGCTGTTGGAAT......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GCTGCACTTGCTCCGCTGTTGGAA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................AATT----------------CCT--GGTTTTGTCAAGTCTGCTGC..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGGAATGGCTGTGCCTTACTCCCAAA..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CCGCTGTTGGAATGGCTGTGC..............2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTTAATT----------------CCT--GGTTTTGTCAAGTC................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................CTCCGCTGTTGGAATGGCTG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................GTTTTGTCAAGTCTGCTGCACGC......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTGTTGGAATGGCTGTGCC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GCTGCACTTGCTCCGCTGTTGGAATG.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGGCTTGCAAATTTTATT------------AACTGT........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................ACTTGCTCCGCTGTTGGAATGGCTGTG...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CT--GGTTTTGTCAAGTCTGCT............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATT------------AACTGTTAATT----------------CCT--GGTT..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGTGCCTTACTCCCAAAG.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGCACTTGCTCCGCTGTTGGAATGGC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................CACTTGCTCCGCTGTTGGAATGGCT..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CTTGCTCCGCTGTTGGAATGGCA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTTGTCAAGTCTGCTGCACTT......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TGGCTGTGCCTTACTCCCAAAG.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GCTGTGCCTTACTCCCAAAGG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GCTGCACTTGCTCCGCTGTTG..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTGTTGGAATGGCTGTGCGC............2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTGCTGCACTTGCTCCGCTGT............................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CTGTTGGAATGGCTGTGCCTT...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GTTTTGTCAAGTCTGCTGC..........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TAATT----------------CCT--GGTTTTGTCAAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CTGTTGGAATGGCTGTGCCTTACTC.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................................................TGCACTTGCTCCGCTGTTGGAATGG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCAAGTCTGCTGCACTTGCT...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGTCAAGTCTGCTGCACTTGC....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTTAATT----------------CCT--GGTTTTGTCA....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTGTTGGAATGGCTGTGCCTTA..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGTTGGAATGGCTGTGCCTTACTCC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................................................GCTGTTGGAATGGCTGTGCCTTACTCC......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCTCCGCTGTTGGAATGG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TGCTGCACTTGCTCCGCTGTTG..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTGCTGCACTTGCTCCGC...............................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TGCTGCACTTGCTCCGCTGT............................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
droSim2
CATTTTTGGGGAA---CCCGCTGCTGGAAGCCGATATCCTTAAAGTAAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................CTGCTGGAAGCCGATATCC....................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.................................ATATCCTTAAAGTAAATGTAT.....................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
....TTTGGGGAA---CCCGCTGCTGGAAGCCGA.........................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
............A---CCCGCTGCTGGAAGCCGATAT......................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
droSec2
CATTTTTGGGGAA---CCCGCTGCTGGAAGCCGATATCCTTAAAGTGAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CATTGTTGGGAAA---ACCGCTTTTGGAAGCCGATATCCTTAAAGTGAATGTACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
CATTGTTGGGAAA---ACCGCTTTTGGAAGCC...........................................................................................................................................................................................................................................................................................................................................2911.00100100000000
.........GAAA---ACCGCTTTTGGAAGCCGAT........................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEre2
CATTTTTGGGAAA---TCCGCTGCTGGAAGCCGATATCCTTAAAGTGAATGTATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 04:58 AM