ID:

dvi_19907

 Coordinate:

scaffold_13049:13945056-13945193 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.1 -11.0 -10.9

Flybase annnotation

exon [dvir_GLEANR_11825:5]; exon [dvir_GLEANR_11825:6]; CDS [Dvir\GJ11812-cds]; CDS [Dvir\GJ11812-cds]; intron [Dvir\GJ11812-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACCCACGGCTGATGATGACGAAACAGATGAGTTTACTGTTCAGAACTCGGTAAGTAACAGAAAGACAGAGAGACTTACATGGAACAGGGCACGAGAACGAAACCATTTAGAATATAATATGTTCCTGATCAAGAAAATATAACGAACAGAATCGCCTGGCTTTACCGATCTTCCATTTCGATTGCAGCATATCAAGCTTGTCTTCGGCAAAAGCAGCGGTCACCTTAAATCAGTCGA
**************************************************************************(((.((.((((((((...((....))...))...............))))))))...))).............(((......))).......(((((.........)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 V047
embryo
 V116
male body		 M047
female body
 M027
male body		 SRR060679
140x9_testes_total
 SRR060665
9_females_carcasses_total
 SRR060655
9x160_testes_total
 SRR060659
Argentina_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060658
140_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106730
embryo_16-30h
 SRR060687
9_0-2h_embryos_total
 SRR1106727
larvae
 SRR060682
9x140_0-2h_embryos_total
 SRR060689
160x9_testes_total
..........................................................................................................................................................................................CGCATATCAAGCTTGTCTTCGGC............................. 23 1 1 5.00 5 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GATGATGACGAAACAGATGAGT............................................................................................................................................................................................................. 22 0 1 4.00 4 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0
AACCCACGGCTGATGATGA........................................................................................................................................................................................................................... 19 0 1 3.00 3 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GATGACGAAACAGATGAGT............................................................................................................................................................................................................. 19 0 1 3.00 3 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....CACGGCTGATGATGACGAAAC..................................................................................................................................................................................................................... 21 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AACCCACGGCTGATGATGACGAAAC..................................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGATGATGACGAAACAGATGA............................................................................................................................................................................................................... 21 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATCAAGCTTGTCTTCGGCAAAAGCAGC.................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AACCCACGGCTGATGATGACGAAACA.................................................................................................................................................................................................................... 26 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............GATGACGAAACAGATGAGTTT........................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GATGACGAAACAGATGAGTTTACT........................................................................................................................................................................................................ 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGATGATGACGAAACAGATG................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CCACGGCTGATGATGACGAAAC..................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCAGCGGTCACCTTAAAT....... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..CCCACGGCTGATGATGACGA........................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TATCAAGCTTGTCTTCGGCAAAAG........................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CTTCGGCAAAAGCAGCGGT................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAAAAGCAGCGGTCACCTTAACTCAGTC.. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ACAGATGAGTTTACTGTTCAGAA................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGGTCACCTTAAATCAGTCG. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CATTTCAAGCTTGTCTTCGGC............................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GATGATGACGAAACAGATGAGTT............................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AGATGAGTTTACTGTTCAGAACT.............................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AACCCACGGCTGATGATGACGAAA...................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATGATGACGAAACAGATG................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AAAAGCAGCGGTCACCTTAAATCAGTC.. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTATGACGAAACAGATGAGTTTACT........................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TTACCGATCTTCCATTTCGATTGCAG.................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............TGATGACGAAACAGATGAGTTTAC......................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AAACAGATGAGTTTACTGTTCAGAACT.............................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GAGTTTACTGTTCAGAAC............................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AACCCACGGCTGATGATGACGAA....................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGCGGTCACCTTAAGTCAGT... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAGCTTGTCTTCGGCAAAA......................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GATGATGACGAAACAGATGAGTTTAC......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CATATCAAGCTTGTCTTCGGC............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTCACCTTAAATCAGTCGA 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............ATGACGAAACAGATGAGTT............................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CTTCGGCAAAAGCAGCGGTCACCTT........... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GATGAGTTTACTGTTCAGAACT.............................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCGGCAAAAGCAGCGGTCACCT............ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..CCCACGGCTGATGATGACG......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CAGATGAGTTTACCGTTCAGAACT.............................................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAGCAGCGGTCACCTTAAATC...... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGCATATCAAGCTTGTCTTCGG.............................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CGATACAGATGAGTTTACTGT...................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATGAGGAAACAGATGAGT............................................................................................................................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AAAGCAGCGGTCACCTTAAATC...... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CTCGCATATCAAGCTTGTCTTC................................ 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CTTCCATTTCGATTGCAGC................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AACAGATGAGTTTACTGTTCAGAACT.............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CGGCTGATGATGACGAAACA.................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GGCTGATGATGACGAAACAGATGAGTT............................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGTTTACTGTTCAGAACTCGC........................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AGATGAGTTTACTGTTCAG.................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AGCTTGTCTTCGGCAAAAGCAGCGGTC................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATATCAAGCTTGTCTTCGGCA............................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGAGCAGCGGTCACCTTAAA........ 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CCACGGCTGATGATGACGAAACAGATG................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GACGAAACAGATGAGTTTACT........................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AACAGATGAGTTTACTGTTCAGAACTCGC........................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGTCTTCGGCAAAAGCAGCGGTCACCT............ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AGAATATGACGAAACAGATGAG.............................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGATGACGAAACAGATGAGT............................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GATGATGACGAAACAGATGAGTTTACT........................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GACGAAACAGATGAGTTTACTGTTC.................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AACCCACGGCTGATGATGAC.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GATGATGACGAAACAGATGAGTTTACTG....................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AAAAGCAGCGGTCACCTTAAATCAGTCGA 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TACCGATCTTCCATTTCTAT....................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCAGCGGTCACCTTAAAT....... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CTTGTCTTCGGCAAAAGCAGCGGTCAC.............. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CTGATGATGACGAAACAGATGAGT............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AGATGAGTTTACTGTTCAGAACTC............................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGATGACGAAACAGATGAG.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GCAAAAGCAGCGGTCACC............. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CGAAACAGATGAGTTTACTGTTCA................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...CCACGGCTGATGATGACG......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CCACGGCTGATGATGACGAAACAGAT................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CACGGCTGATGATGACGAAA...................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GATGAGGAAACAGATGAGT............................................................................................................................................................................................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........GATGATGAGGAAACAGATGAGT............................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGCATATCAAGCTTGTCTTC................................ 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.ACCCACGGCTGATGATGACGA........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................CAGATGAGTTTACTGTTCAG.................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TTACCGATCTTCCATTTCGAT....................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GATGACGAAACAGATGAGTTTACTGTTC.................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GATGATGACGAAACAGATG................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GACGAAACAGATGAGTTTACTGT...................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGTCTTCGGCAAAAGCAGCGGTCACC............. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AGATAAGTTTACTGTTCAGAACT.............................................................................................................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TTGTCTTCGGCAAGAGCA...................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................AGATGAGTTTACTGTTCAGAAC............................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATCAAGCTTGTCTTCGGCAAAA......................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TTACCGATCTTCCATTTCTATTGC.................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.ACCCACGGCTGATGATGACGAAAC..................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GACGAAACAGATGAGTTTA.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.ACCCACGGCTGATGATGAC.......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AACAGATGAGTTTACTGTTCAG.................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............GATGACGAAACAGATGCGT............................................................................................................................................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATATCAAGCTTGTCTTCGGC............................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AACTCACGGCTGATGATGAC.......................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CTTACATGGAACAGGGCAC................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGATGATGACCAAAAAGATGA............................................................................................................................................................................................................... 21 2 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GTTTACTGTTCAGAACTCGC........................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TCGTATATCAAGCTTGTCTTC................................ 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATGATGACGAAATAGATGT............................................................................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GGCAACAGCAGCGGTCACC............. 19 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ATCATCAAGCTTGTCTTCGGCA............................ 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTACTGTTCAGAACTCGCAT......................................................................................................................................................................................... 20 3 7 0.29 2 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATGACGAAACAGAAGGGT............................................................................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................GTTCAGATCTCGGTA......................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................AAATATTCCTGCTCAAGAAAA.................................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............ATGATGACCAAAAAGATGATT............................................................................................................................................................................................................. 21 3 12 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGAGGATGAAGAAACAGA.................................................................................................................................................................................................................. 18 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATAGCAAGCTTGGCTTCAGC............................. 20 3 19 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATGATGACGAAACGGTGGA............................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACGAAAGAGATGAGATGACTG....................................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTGGGTGCCGACTACTACTGCTTTGTCTACTCAAATGACAAGTCTTGAGCCATTCATTGTCTTTCTGTCTCTCTGAATGTACCTTGTCCCGTGCTCTTGCTTTGGTAAATCTTATATTATACAAGGACTAGTTCTTTTATATTGCTTGTCTTAGCGGACCGAAATGGCTAGAAGGTAAAGCTAACGTCGTATAGTTCGAACAGAAGCCGTTTTCGTCGCCAGTGGAATTTAGTCAGCT
**************************************************(((.((.((((((((...((....))...))...............))))))))...))).............(((......))).......(((((.........)))))...************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 M047
female body
 SRR060666
160_males_carcasses_total
 SRR060674
9x140_ovaries_total
.................................................................................................................................................................................................GTTCGAACAGAAGCCGTTTTC........................ 21 0 1 1.00 1 0 1 0 0
.............................................................................................................................................................................................................GCCGTTTTCGTGGCCACGGGAA........... 22 3 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................CCGTTTTAGTCGCCACTGGG............ 20 3 6 0.17 1 1 0 0 0
...............................................................................................................................................................AGAAATGGGTAGATGGTA............................................................. 18 3 20 0.05 1 0 0 0 1
.........................................................................................................................................................................AGAAGGTAAACCTTTCGTCG................................................. 20 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:13945006-13945243 - dvi_19907 AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGAAACAGATGAGTTTACTGTTCAGAACTCGGTAAGTAACAGA---AA--------GACAGAGAGACTTACATGGAACAGGGCACGAGAACGAAACCATTTAGAATATAATATGTTCCTGATCAAGAAAATAT--AACGAACAGAAT--CGC-----------------------------------CTGGCTT----TACCGATC----------TTCC-------------ATTTCGATTGCAGCATATCAAGCTTGTCTTCGGCAAAAGCAGCGGTCACCTTAAATCAGTCGA
droMoj3 scaffold_6680:13378636-13378691 + TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAAATCAAGCTGACATTCGTCAAGAGCACTGGACACCTTAAAACGATCGA
droGri2 scaffold_15110:15294737-15294950 + TG------------------------------------------------------------------------------------A---TGATGCGGAATCGGATGAATTTATTATACAGAATTCGGTAAGGGAACAT---TT--------TA--------------------------------------------AAATTG---------ATAATCAAGACACAACCCA-----AACA---GTTTGGTAATAAACTGATAGATGACTTTGATAGATA------AC-ACTATACATA------------AATATCTATTGACAAACAATTTCCTTTACAGCTAATCAAGCTTACGTTCGACAAGACAAGCGGACACCTAAAGACTGTGCA
droWil2 scf2_1100000004585:67460-67617 + ACC---------------CTA--------------------------------------------------------------TG-A---TGATGATGATTCGGAAGAGACTGTTGTCCAGAATTCGGTGAGTTCACGA---GAGGAA----------------------------------------------------AAAT---------------------------AACCTGCAGA---------------------------------------ACTCTG--AC----TCACGCA-------------AC-------------TTTTATTCAACAGCTTATAAAACTAACTTTTGACAACAAATCAGGTCGCTTGAAGACGGTGGA
dp5 Unknown_group_551:5400-5553 - ACC---------------CAT--------------------------------------------------------------AG-C---TGAGAACGAAGCAGATGAATTCACGTTAGAGAACTCAGTAAGTGATATT--------------------------------------------------------------------------------------------------CAA---------------------------------------AAGAGTA--AT----TACCACTAATTCAATTCAATGA--------------AATAATTTTCAGCTTATAAGGCTTGTGTTCACCAAAAGTACAGGCCACCTTAAAGCTGTAAA
droPer2 scaffold_1:812058-812211 + ACC---------------CAT--------------------------------------------------------------AG-C---TGAGAACGACGCAGATGAATTCACGTTAGAGAACTCAGTAAGTGAGATA--------------------------------------------------------------------------------------------------CAA---------------------------------------AAGAGTA--AT----TACCACTAATTCAATTCAATGA--------------AATAATTTTCAGCTTATAAGGCTTGTGTTCACCAAAAGTACAGGCCACCTTAAAGCTGTAGA
droAna3 scaffold_12916:10427006-10427164 - GAT---------------CCG--------------------------------------------------------------T-------------GAAGATGGCGAGACTGTCGTTCAGACCTCGGTGAGTATTATTTTCGC--TATTCT----GCT-------------------------TAAC--------------AA---------------------------A-----CTTT---CTAATGA-----------------------------------AT-GAATTATC--------------CTTTA-------------CTCTCTCCATTAGACTGTCAAACTGGTCATCGATAACAACTCCGGCCTCCTGAAAACCGTGGA
droBip1 scf7180000396572:2675123-2675282 + GCC---------------A--------------------------------------------------------------A--------CGATGAAGAATCCAATGAATTAATAGTTGAAAACTCGGTAAGAATTTAA---AAAATG----------------------------------------------------ATTT---------------------------ATTTTATAAT---GTTCATT-----------------------------------AT-ATAATAATGT------------ATGTT-------------CTA-TCATTACAGCTCATAAAACTAGTTTTTGATACCACCACTGGTGGCTTGAAAACCATCGA
droKik1 scf7180000302472:2877704-2877860 + ATC---------------CCG------------------------------------------------------------A-AG-C---TGAAGATGAAAACACCGAATTAATTGTACAGAACTCGGTAAGTTAACAT---TA--------GT----A-------------------------TATT---------------AAAA--------------------------------------TATATA-----------------------------------AA-ATTAATCATA------------AATAT--------------ATATATCTCCAGCTTATAAAACTGGTATTTGACACAGCTAAGGGCGGCCTGAAAGCCATTGA
droFic1 scf7180000448537:850-1024 - GAC---------------CTT--------------------------------------------------------------CG-A---CGATGAAGTCGAGGGAGAGACTGTTGTGCAGACCTCGGTAAGTCAAAAA---GACTTATTAA----T-T-------------------------CATT---------------GAGC--------------------------------------TGTCTA-----------------------------------AC-CTAACATTCA------------ATTTTCTATCCCCACC--TTCTTACCAATAGCAAGTCAAACTGGTGATCGACAACAAGACTGGTCTGCTGAAGACCGTCGA
droEle1 scf7180000491186:1621013-1621171 - AAC---------------TG-------------------------------------------------------AAACCCAC--G------ATGACGAAGATGGAGAGACTGTGGTGCAGACTTCGGTAGGTCTACAA---GCATTAATTC----ATT-------------------------AAGT---------------GA------------------------------------------ACTA-----------------------------------TT-TTAACA-----------------AACT-------------TCATCCTTCCTAGCAAATCAAACTGGTGATCGACAACAAAACTGGTCTCTTGAAGACCGTCGA
droRho1 scf7180000779312:62010-62167 + AG---------------------------------------------------------------------------ACCCA-C-------------GATGAAGAAGAGACTATTGTCGAGAATTCGGTGAGTCCCAAA---GA--TAATAT----GTA-------------------------AAGA---------------GA--------------------------A-----ATTT---TTATTTA-----------------------------------AC-GATCTGTGTT------------AATAT--------------ATATTTTATTAGCTTATAAAACTGGTGATTGACAACAAAACAGGCCGTTTGAAGACCGTTGA
droBia1 scf7180000301518:973452-973608 + TC-----------------------------------------------------------------------------------G------ACGACGAGGAAGGAGAGACTGTGGTGCAGACTTCGGTAAGCTCTCAG---AAACCACCAA----AAT-------------------------GAGC---------------GCAC--------------------------------------TATTTC-----------------------------------AA-CTAACGCCTA------------AATAT-------------TTACCTTTTTTAGGAAGTGAAACTGGTGATCGACAACAAAACTGGTCTCCTAAAGACAGTCGA
droTak1 scf7180000410580:74322-74553 - CCGTCAAGACTGAAGAATCTAACTTGGAGGCGACGAAGCGATTCAAGAAGGCTCTCTCCGCGAAGAACTCTACTCAGACCTTC--G------ACGACGAGGATGGAGAAACTGTGGTGCAGACCTCGGTAAGATCTCGT---AA--------GT----C-----------------------------------------ACTC---------------------------AT-----CTC--AGGGACCA-----------------------------------AA-CTAATATTCT------------G-CTT-------------TTACCTTCATTAGCAAGTCAAACTGGTGATCGACAACAAATCTGGTCTGCTGAAGACCGTCGA
droEug1 scf7180000409554:740815-741012 + AAG---------------TGC------------CTAAAAGATTCAAGAAGGTTCATTCCCTGAAAACCGATGCGCAGACAC--------------ACGATGATGGAGAGACAGTTGTCCAGAATTCGGTAAGTGCCTAA---GTAAGGGTAA----GTT-------------------------AAGA---------------TAGC--------------------------------------TTTTTC------------------------------------G-TAAACAT-----------------TTT--------------GTTTTTTATTAGCTTATAAAACTGGTAATTGACAACAACACGGGCCGCTTGAAGACCGTTGA
dm3 chr2L:8766547-8766696 - AAC---------------CCT--------------------------------------------------------------T-------------GATGATCAAGAGACAATTGTTCAAAATTCGGTAAGTTTTACA---ATATTAACAA----AAA-------------------------TAGG---------------TAAT-------------------------------------------------------------------------------AT-ATACCTAAAT------------ATTTT-------------CTTTCCTTACTAGCTTATAAAACTAGTGATCGACAATAACACAGGACGTCTGAAGACCGTTGA
droSim2 2l:8484862-8485022 - CTG------------------------------------------------------------------------AGACCTTT--G------ACGACGATGAAGGCGAGACTGTGGTGCAGACTTCGGTATGTTAATGG---TT--------TT--------------------------------------------TAGTTA---------------------------A-----TTTT---GTATCTA-----------------------------------AT-GTAACATTTT------------GATTC-------------CTATCTTTATTAGCAAGTCAAACTTGTGATCGACAACAAAACTGGTCTTCTGAAGACTGTCGA
droSec2 scaffold_3:4239945-4240094 - AAC---------------CCT--------------------------------------------------------------T-------------GATGATCAAGACACAATTGTTCAAAATTCGGTAAGTTTTACA---GTATGCACAA----CAA-------------------------AAGG---------------TAAC-------------------------------------------------------------------------------AT-ATTCCTAAAT------------ATTTT-------------CTTTCCTTACTAGCTTATAAAACTAGTGATCGACAATAACACAGGCCGCTTGAAAACCGTTGA
droYak3 2L:11422425-11422642 - AAT---------------CCACGCTGGAAGTGCCTAAGCGTTTCAAGAAGGTTCACTCGCTGAAGAATGCTACTGAGACCTTT--G------ACGACGATGAGGGAGAGACTGTGGTGCAGACTTCGGTACGTTATTGG---TT--------TT--------------------------------------------AGGCTC---------------------------AT-----TTT---GTAACTT-----------------------------------AA-GTAACATTGT------------GATTT-------------CTTCCTTTAATAGCAAGTCAAACTCGTGATCGATAACAAAACTGGTCTTCTTAAGACTGTCGA
droEre2 scaffold_4929:9365617-9365778 - CAC---------------TG-------------------------------------------------------AGACCTAT--G------ACGATGTTGAAGGAGAGACTGTGGTGCAGACTTCGGTAAGTTACTGA---GT--------TC-------------------------------A--------------GCTC---------------------------A-----TTTT---GTGTGGA-----------------------------------AA-GTAACATTGT------------GATGC-------------CTTCCTTTAATAGCAAATCAAACTTGTGATCGACAACAAAACCGGTCTGCTGAAGACTGTCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGAAACAGATGAGTTTACTGTTCAGAACTCGGTAAGTAACAGA---AA--------GACAGAGAGACTTACATGGAACAGGGCACGAGAACGAAACCATTTAGAATATAATATGTTCCTGATCAAGAAAATAT--AACGAACAGAAT--CGC-----------------------------------CTGGCTT----TACCGATC----------TTCC-------------ATTTCGATTGCAGCATATCAAGCTTGTCTTCGGCAAAAGCAGCGGTCACCTTAAATCAGTCGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................GATGATGACGAAACAGATGAGT..........................................................................................................................................................................................................................................................................................2214.004000201000000000000010000000000000000000000000000000000000000000
AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGA........................................................................................................................................................................................................................................................................................................1913.003001100000000000100000000000000000000000000000000000000000000000
...........................................................................................GATGACGAAACAGATGAGT..........................................................................................................................................................................................................................................................................................1913.003000001000000000000000000000000000000000000000000000000000001010
...................CA------------------------------------------------------------C-GG-CTGATGATGACGAAAC..................................................................................................................................................................................................................................................................................................2113.003300000000000000000000000000000000000000000000000000000000000000
AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGAAAC..................................................................................................................................................................................................................................................................................................2513.003000300000000000000000000000000000000000000000000000000000000000
.......................................................................................TGATGATGACGAAACAGATGA............................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................ATCAAGCTTGTCTTCGGCAAAAGCAGC....................2712.002000000000000000000000000000000000000000000000000000000000002000
AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGAAACA.................................................................................................................................................................................................................................................................................................2612.002000100000000000000000000000000000100000000000000000000000000000
...........................................................................................GATGACGAAACAGATGAGTTT........................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000002000
...........................................................................................GATGACGAAACAGATGAGTTTACT.....................................................................................................................................................................................................................................................................................2412.002000100000000000000000000000000000000000000000000000000000001000
.......................................................................................TGATGATGACGAAACAGATG.............................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..................CCA------------------------------------------------------------C-GG-CTGATGATGACGAAAC..................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGCAGCGGTCACCTTAAAT.......1911.001001000000000000000000000000000000000000000000000000000000000000
..C---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGA.....................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................TATCAAGCTTGTCTTCGGCAAAAG........................2411.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................CTTCGGCAAAAGCAGCGGT.................1911.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................ACAGATGAGTTTACTGTTCAGAA.............................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CGGTCACCTTAAATCAGTCG.2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................GATGATGACGAAACAGATGAGTT.........................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................AGATGAGTTTACTGTTCAGAACT...........................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGAAA...................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................ATGATGACGAAACAGATG.............................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AAAAGCAGCGGTCACCTTAAATCAGTC..2711.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................T----TACCGATC----------TTCC-------------ATTTCGATTGCAG..................................................2611.001000000000000000000000000000000000000000000000000000000000010000
..........................................................................................TGATGACGAAACAGATGAGTTTAC......................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................AAACAGATGAGTTTACTGTTCAGAACT...........................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................GAGTTTACTGTTCAGAAC............................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGAA....................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AAGCTTGTCTTCGGCAAAA.........................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................GATGATGACGAAACAGATGAGTTTAC......................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CATATCAAGCTTGTCTTCGGC.............................2111.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GTCACCTTAAATCAGTCGA1911.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................ATGACGAAACAGATGAGTT.........................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CTTCGGCAAAAGCAGCGGTCACCTT...........2511.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................GATGAGTTTACTGTTCAGAACT...........................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................TCGGCAAAAGCAGCGGTCACCT............2211.001100000000000000000000000000000000000000000000000000000000000000
..C---------------CCA------------------------------------------------------------C-GG-CTGATGATGACG......................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................AAGCAGCGGTCACCTTAAATC......2111.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AAAGCAGCGGTCACCTTAAATC......2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................C----------TTCC-------------ATTTCGATTGCAGC.................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................AACAGATGAGTTTACTGTTCAGAACT...........................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................C-GG-CTGATGATGACGAAACA.................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................GG-CTGATGATGACGAAACAGATGAGTT.........................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AGTTTACTGTTCAGAACTCGC........................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................AGATGAGTTTACTGTTCAG...............................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AGCTTGTCTTCGGCAAAAGCAGCGGTC................2711.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................ATATCAAGCTTGTCTTCGGCA............................2111.001000100000000000000000000000000000000000000000000000000000000000
..................CCA------------------------------------------------------------C-GG-CTGATGATGACGAAACAGATG.............................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................GACGAAACAGATGAGTTTACT.....................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................AACAGATGAGTTTACTGTTCAGAACTCGC........................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGTCTTCGGCAAAAGCAGCGGTCACCT............2711.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATGACGAAACAGATGAGT..........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................GATGATGACGAAACAGATGAGTTTACT.....................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................GACGAAACAGATGAGTTTACTGTTC.................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
AAC---------------CCA------------------------------------------------------------C-GG-CTGATGATGAC.......................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................GATGATGACGAAACAGATGAGTTTACTG....................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AAAAGCAGCGGTCACCTTAAATCAGTCGA2911.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTCACCTTAAAT.......1811.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................CTTGTCTTCGGCAAAAGCAGCGGTCAC..............2711.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................CTGATGATGACGAAACAGATGAGT..........................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................AGATGAGTTTACTGTTCAGAACTC..........................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATGACGAAACAGATGAG...........................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GCAAAAGCAGCGGTCACC.............1811.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................CGAAACAGATGAGTTTACTGTTCA................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
..................CCA------------------------------------------------------------C-GG-CTGATGATGACG......................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
..................CCA------------------------------------------------------------C-GG-CTGATGATGACGAAACAGAT..............................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
...................CA------------------------------------------------------------C-GG-CTGATGATGACGAAA...................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.AC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGA.....................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................CAGATGAGTTTACTGTTCAG...............................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................T----TACCGATC----------TTCC-------------ATTTCGAT.......................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................GATGACGAAACAGATGAGTTTACTGTTC.................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................GATGATGACGAAACAGATG.............................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................GACGAAACAGATGAGTTTACTGT...................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGTCTTCGGCAAAAGCAGCGGTCACC.............2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGATGAGTTTACTGTTCAGAAC............................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATCAAGCTTGTCTTCGGCAAAA.........................2211.001001000000000000000000000000000000000000000000000000000000000000
.AC---------------CCA------------------------------------------------------------C-GG-CTGATGATGACGAAAC..................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................GACGAAACAGATGAGTTTA.......................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.AC---------------CCA------------------------------------------------------------C-GG-CTGATGATGAC.......................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................AACAGATGAGTTTACTGTTCAG...............................................................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATATCAAGCTTGTCTTCGGC.............................2011.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................CTTACATGGAACAGGGCAC...................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................GTTTACTGTTCAGAACTCGC........................................................................................................................................................................................................................................................................2020.501000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTACTGTTCAGAACTCGCAT......................................................................................................................................................................................................................................................................2070.292000001000000000000000000000001000000000000000000000000000000000
droMoj3
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAAATCAAGCTGACATTCGTCAAGAGCACTGGACACCTTAAAACGATCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGTCAAGAGC.......................2613.003200001
.......................................................................................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGT..............................1912.002100001
.......................................................................................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGTCAAGAGCA......................2712.002200000
.................................................................................................................................................................................................................................................................................................................................................................................ACTGGACACCTTAAAACGAT...2012.002200000
........................................................................................................................................................................................................................................................................................................................................................AATCAAGCTGACATTCGTCAAGAGCA......................2612.002200000
........................................................................................................................................................................................................................................................................................................................................................AATCAAGCTGACATTCGTC.............................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGTCAAGAGCA......................2811.001100000
............................................................................................................................................................................................................................................................................................................................................................AAGCTGACATTCGTCAAGAG........................2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................GTCAAGAGCACTGGACACCTT...........2111.001100000
......................................................................................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGTC.............................2111.001000001
..............................................................................................................................................................................................................................................................................................................................................................GCTGACATTCGTCAAGAGCA......................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................ACTGGACACCTTAAAACGATC..2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................CACTGGACACCTTAAAACGATCGA2411.001100000
......................................................................................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGT..............................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................CAAGAGCACTGGACACCTTAAAA.......2311.001100000
.......................................................................................................................................................................................................................................................................................................................................................AAATCAAGCTGACATTCGTCAAGAG........................2511.001100000
......................................................................................................................................................................................................................................................................................................................................................CAAATCAAGCTGACATTCGTCAAGAGCAC.....................2911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................TTCGTCAAGAGCACTGGA.................1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................ATCAAGCTGACATTCGTCAAGAGCA......................2511.001100000
droGri2
TG------------------------------------------------------------------------------------A---TGATGCGGAATCGGATGAATTTATTATACAGAATTCGGTAAGGGAACAT---TT--------TA--------------------------------------------AAATTG---------ATAATCAAGACACAACCCA-----AACA---GTTTGGTAATAAACTGATAGATGACTTTGATAGATA------AC-ACTATACATA------------AATATCTATTGACAAACAATTTCCTTTACAGCTAATCAAGCTTACGTTCGACAAGACAAGCGGACACCTAAAGACTGTGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................AAGCTTACGTTCGACAAGACA.......................2111.00110
droWil2
ACC---------------CTA--------------------------------------------------------------TG-A---TGATGATGATTCGGAAGAGACTGTTGTCCAGAATTCGGTGAGTTCACGA---GAGGAA----------------------------------------------------AAAT---------------------------AACCTGCAGA---------------------------------------ACTCTG--AC----TCACGCA-------------AC-------------TTTTATTCAACAGCTTATAAAACTAACTTTTGACAACAAATCAGGTCGCTTGAAGACGGTGGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................GATGATTCGGAAGAGACTGTTGTCCA................................................................................................................................................................................................................................................................................2612.00200200
...........................................................................................................................................................................................................................................TGCAGA---------------------------------------ACTCTG--AC----TCACGCA-------------AC-------------...............................................................2312.00220000
...........................................................................................................................................................................................................................................................................................................................................................................AACAAATCAGGTCGCTTGAAGACGGT...2611.00100100
....................................................................................G-A---TGATGATGATTCGGAAGAGACTGTT.....................................................................................................................................................................................................................................................................................2711.00100100
....................................................................................G-A---TGATGATGATTCGGAAGAGACTGT......................................................................................................................................................................................................................................................................................2611.00100100
................................................................................................................................................................................................................................................................................................................................................................................ATCAGGTCGCTTGAAGACGGT...2111.00100100
............................................................................................ATGATGATTCGGAAGAGACT........................................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................................AATCAGGTCGCTTGAAGA.......1811.00101000
...................................................................................TG-A---TGATGATGATTCGGAAGAGACT........................................................................................................................................................................................................................................................................................2511.00100010
..............................................................................................GATGATTCGGAAGAGACTGTTGT...................................................................................................................................................................................................................................................................................2311.00100100
..............................................................................................GATGATTCGGAAGAGACTGTTGTCCAGA..............................................................................................................................................................................................................................................................................2811.00100100
........................................................................................................AAGAGACTGTTGTCCAGAATT...........................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................................................................................................................................................................................CAAATCAGGTCGCTTGAAGACGGT...2411.00100010
dp5
ACC---------------CAT--------------------------------------------------------------AG-C---TGAGAACGAAGCAGATGAATTCACGTTAGAGAACTCAGTAAGTGATATT--------------------------------------------------------------------------------------------------CAA---------------------------------------AAGAGTA--AT----TACCACTAATTCAATTCAATGA--------------AATAATTTTCAGCTTATAAGGCTTGTGTTCACCAAAAGTACAGGCCACCTTAAAGCTGTAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ACC---------------CAT--------------------------------------------------------------AG-C---TGAGAACGACGCAGATGAATTCACGTTAGAGAACTCAGTAAGTGAGATA--------------------------------------------------------------------------------------------------CAA---------------------------------------AAGAGTA--AT----TACCACTAATTCAATTCAATGA--------------AATAATTTTCAGCTTATAAGGCTTGTGTTCACCAAAAGTACAGGCCACCTTAAAGCTGTAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GAT---------------CCG--------------------------------------------------------------T-------------GAAGATGGCGAGACTGTCGTTCAGACCTCGGTGAGTATTATTTTCGC--TATTCT----GCT-------------------------TAAC--------------AA---------------------------A-----CTTT---CTAATGA-----------------------------------AT-GAATTATC--------------CTTTA-------------CTCTCTCCATTAGACTGTCAAACTGGTCATCGATAACAACTCCGGCCTCCTGAAAACCGTGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
GAT---------------CCG--------------------------------------------------------------T-------------GAAGATGGCGAGACT........................................................................................................................................................................................................................................................................................2212.002020000
.................................................................................................GAAGATGGCGAGACTGTCGTTCA................................................................................................................................................................................................................................................................................2312.002000020
.......................................................................................................................................................................................................................................................................................................................................................................CGATAACAACTCCGGCCTCCTGA..........2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................ATCGATAACAACTCCGGCCC...............2011.001010000
....................................................................................................................................................................................................................................................................................................................................................................CATCGATAACAACTCCGGCCTC..............2211.001010000
GAT---------------CCG--------------------------------------------------------------T-------------GAAGATGGCGA............................................................................................................................................................................................................................................................................................1811.001010000
...................................................................................................AGATGGCGAGACTGTCGTTCAGACCT...........................................................................................................................................................................................................................................................................2611.001010000
.......................................................................................................................................................................................................................................................................................................................................................................CGATAACAACTCCGGCCTCCT............2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................CATCGATAACAACTCCGGCC................2011.001010000
GAT---------------CCG--------------------------------------------------------------T-------------GAAGATGGCGAGAC.........................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................CTGTCAAACTGGTCATCGATA............................2111.001000001
..T---------------CCG--------------------------------------------------------------T-------------GAAGATGGCGAGACTGTCGTTCA................................................................................................................................................................................................................................................................................2811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................TCCGGCCTCCTGAAAACCGTGGA2311.001100000
GAT---------------CCG--------------------------------------------------------------T-------------GAAGATGGCGAGACTGTC.....................................................................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................................................................CTCCGGCCTCCTGAAAACCGT...2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................CATCGATAACAACTCCGGCCTCC.............2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................GTCATCGATAACAACTCCGGCCTCC.............2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................CATCGATAACAACTCCGGC.................1911.001001000
....................................................................................................................................................................................................................................................................................................................................................................CATCGATAACAACTCCGGCCT...............2111.001010000
............................................................................................................GACTGTCGTTCAGACCTCGAC.......................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................TAACAACTCCGGCCTCCTGA..........2011.001001000
.....................................................................................................................................................................................................................................................................................................................................................................ATCGATAACAACTCCGGCC................1911.001100000
droBip1
GCC---------------A--------------------------------------------------------------A--------CGATGAAGAATCCAATGAATTAATAGTTGAAAACTCGGTAAGAATTTAA---AAAATG----------------------------------------------------ATTT---------------------------ATTTTATAAT---GTTCATT-----------------------------------AT-ATAATAATGT------------ATGTT-------------CTA-TCATTACAGCTCATAAAACTAGTTTTTGATACCACCACTGGTGGCTTGAAAACCATCGASizeHit CountTotal NormTotal
No Reads
droKik1
ATC---------------CCG------------------------------------------------------------A-AG-C---TGAAGATGAAAACACCGAATTAATTGTACAGAACTCGGTAAGTTAACAT---TA--------GT----A-------------------------TATT---------------AAAA--------------------------------------TATATA-----------------------------------AA-ATTAATCATA------------AATAT--------------ATATATCTCCAGCTTATAAAACTGGTATTTGACACAGCTAAGGGCGGCCTGAAAGCCATTGASizeHit CountTotal NormTotal
No Reads
droFic1
GAC---------------CTT--------------------------------------------------------------CG-A---CGATGAAGTCGAGGGAGAGACTGTTGTGCAGACCTCGGTAAGTCAAAAA---GACTTATTAA----T-T-------------------------CATT---------------GAGC--------------------------------------TGTCTA-----------------------------------AC-CTAACATTCA------------ATTTTCTATCCCCACC--TTCTTACCAATAGCAAGTCAAACTGGTGATCGACAACAAGACTGGTCTGCTGAAGACCGTCGASizeHit CountTotal NormTotal
No Reads
droEle1
AAC---------------TG-------------------------------------------------------AAACCCAC--G------ATGACGAAGATGGAGAGACTGTGGTGCAGACTTCGGTAGGTCTACAA---GCATTAATTC----ATT-------------------------AAGT---------------GA------------------------------------------ACTA-----------------------------------TT-TTAACA-----------------AACT-------------TCATCCTTCCTAGCAAATCAAACTGGTGATCGACAACAAAACTGGTCTCTTGAAGACCGTCGASizeHit CountTotal NormTotal
No Reads
droRho1
AG---------------------------------------------------------------------------ACCCA-C-------------GATGAAGAAGAGACTATTGTCGAGAATTCGGTGAGTCCCAAA---GA--TAATAT----GTA-------------------------AAGA---------------GA--------------------------A-----ATTT---TTATTTA-----------------------------------AC-GATCTGTGTT------------AATAT--------------ATATTTTATTAGCTTATAAAACTGGTGATTGACAACAAAACAGGCCGTTTGAAGACCGTTGASizeHit CountTotal NormTotal
No Reads
droBia1
TC-----------------------------------------------------------------------------------G------ACGACGAGGAAGGAGAGACTGTGGTGCAGACTTCGGTAAGCTCTCAG---AAACCACCAA----AAT-------------------------GAGC---------------GCAC--------------------------------------TATTTC-----------------------------------AA-CTAACGCCTA------------AATAT-------------TTACCTTTTTTAGGAAGTGAAACTGGTGATCGACAACAAAACTGGTCTCCTAAAGACAGTCGASizeHit CountTotal NormTotal
No Reads
droTak1
CCGTCAAGACTGAAGAATCTAACTTGGAGGCGACGAAGCGATTCAAGAAGGCTCTCTCCGCGAAGAACTCTACTCAGACCTTC--G------ACGACGAGGATGGAGAAACTGTGGTGCAGACCTCGGTAAGATCTCGT---AA--------GT----C-----------------------------------------ACTC---------------------------AT-----CTC--AGGGACCA-----------------------------------AA-CTAATATTCT------------G-CTT-------------TTACCTTCATTAGCAAGTCAAACTGGTGATCGACAACAAATCTGGTCTGCTGAAGACCGTCGASizeHit CountTotal NormTotal
No Reads
droEug1
AAG---------------TGC------------CTAAAAGATTCAAGAAGGTTCATTCCCTGAAAACCGATGCGCAGACAC--------------ACGATGATGGAGAGACAGTTGTCCAGAATTCGGTAAGTGCCTAA---GTAAGGGTAA----GTT-------------------------AAGA---------------TAGC--------------------------------------TTTTTC------------------------------------G-TAAACAT-----------------TTT--------------GTTTTTTATTAGCTTATAAAACTGGTAATTGACAACAACACGGGCCGCTTGAAGACCGTTGASizeHit CountTotal NormTotal
No Reads
dm3
AAC---------------CCT--------------------------------------------------------------T-------------GATGATCAAGAGACAATTGTTCAAAATTCGGTAAGTTTTACA---ATATTAACAA----AAA-------------------------TAGG---------------TAAT-------------------------------------------------------------------------------AT-ATACCTAAAT------------ATTTT-------------CTTTCCTTACTAGCTTATAAAACTAGTGATCGACAATAACACAGGACGTCTGAAGACCGTTGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................ACAGGACGTCTGAAGACCGT...2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000400000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................CACAGGACGTCTGAAGACCGT...2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000200000000000000000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................CAGGACGTCTGAAGACCGT...1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AGGACGTCTGAAGACCGTT..1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101200000000000000000010000000000
.................................................................................................GATGATCAAGAGACAATTGTT..................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000200000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACACAGGACGTCTGAAGACCGT...2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CACAGGACGTCTGAAGACCGTT..2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CACAGGACGTCTGAAGACCGTATC2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATAACACAGGACGTCTGAAGACCGTT..2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................T--------------------------------------------------------------T-------------GATGATCAAGAGACAAT......................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TCCTTACTAGCTTATAAAAC........................................2012.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AGGACGTCTGAAGACCGT...1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACAGGACGTCTGAAGACCGTTG.2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CAGGACGTCTGAAGACCGTT..2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................ATAACACAGGACGTCTGAAGACCGT...2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATCGACAATAACACAGGACGTCTGAA.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AAAACTAGTGATCGACAAT..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATAACACAGGACGTCTGAAGACCGTTG.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CT--------------------------------------------------------------T-------------GATGATCAAGAGACAATTGTTTC................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................ATGATCAAGAGACAATTGT...................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTAGTGATCGACAATAACACAGG..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GATCGACAATAACACAGGACGT..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GATCGACAATAACACAGGACGTCTG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AGGACGTCTGAAGACCGTTGA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATAACACAGGACGTCTGAAGACC.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GGACGTCTGAAGACCGT...1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------------------------------------------------------------T-------------GATGATCAAGAGACAATTGTTT.................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................................................CACAGGACGTCTGAAGACC.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ACACAGGACGTCTGAAGAC......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTAGTGATCGACAATAAC.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TAACACAGGACGTCTGA..........1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GATGATCAAGAGACAATTGTTCA................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACAGGACGTCTGAAGACC.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATGATCAAGAGACAATTGTT..................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACACAGGACGTCTGAAGACCGG...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ACACAGGACGTCTGAAGACCGT...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ACACAGGACGTCTGAAGACCGTTG.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACACAGGACGTCTGAAG........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TCAAGAGACAATTGTTCA................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ACACAGGACGTCTGAAGACCGTT..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AACTAGTGATCGACAATAACACAGGA.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................T-------------GATGATCAAGAGACAATTG....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TAACACAGGACGTCTGAAGACCGT...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................CAATAACACAGGACGTCTGAAGACCGTT..2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACAGGACGTCTGAAGACCGTT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................................................................CTTATAAAACTAGTGATCGACAAT..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CACAGGACGTCTGAAGACCG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................CT--------------------------------------------------------------T-------------GATGATCAAGAGACAATTGTTC.................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CAGGACGTCTGAAGACCGTTGA2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACACAGGACGTCTGAAGACCGTTGA2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................T--------------------------------------------------------------T-------------GATGATCAAGAGACAATTGTTCAAA..............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATCAAGAGACAATTGTTCAAAATT...........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCTTATAAAACTAGTGATCGAC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATAAAACTAGTGATCGAC.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AAAACTAGTGATCGACAATAACACAG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CAATAACACAGGACGTCTGAA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GATGATCAAGAGACAATTGT...................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TCGACAATAACACAGGACGTC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACACAGGACGTCTGAAGACC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
CTG------------------------------------------------------------------------AGACCTTT--G------ACGACGATGAAGGCGAGACTGTGGTGCAGACTTCGGTATGTTAATGG---TT--------TT--------------------------------------------TAGTTA---------------------------A-----TTTT---GTATCTA-----------------------------------AT-GTAACATTTT------------GATTC-------------CTATCTTTATTAGCAAGTCAAACTTGTGATCGACAACAAAACTGGTCTTCTGAAGACTGTCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................GATGAAGGCGAGACTGTGGTGC.................................................................................................................................................................................................................................................................................2213.00300300000000000000
........................................................................................................................................................................................................................................................................................................................................................AGTCAAACTTGTGATCGACAAC..........................2213.00300300000000000000
............................................................................................................................................................................................................................................................................................................................................................AAACTTGTGATCGACAACAAAACTGGT.................2712.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACTGGTCTTCTGAAGACT.....1812.00200200000000000000
........................................................................................................GCGAGACTGTGGTGCAGACTT...........................................................................................................................................................................................................................................................................2112.00202000000000000000
............................................................................................................................................................................................................................................................................................................................................................AAACTTGTGATCGACAACA.........................1912.00200200000000000000
........................................................................................................................................................................................................................................................................................................................................................AGTCAAACTTGTGATCGAC.............................1912.00200110000000000000
............................................................................GACCTTT--G------ACGACGATGAAGGC..............................................................................................................................................................................................................................................................................................2211.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AAAACTGGTCTTCTGAAGACTGC...2311.00101000000000000000
.................................................................................................GATGAAGGCGAGACTGTGGTGCA................................................................................................................................................................................................................................................................................2311.00100010000000000000
..............................................................................................GACGATGAAGGCGAGACTGTGGTGC.................................................................................................................................................................................................................................................................................2511.00101000000000000000
............................................................................................................GACTGTGGTGCAGACTTCGCA.......................................................................................................................................................................................................................................................................2111.00100010000000000000
................................................................................TTT--G------ACGACGATGAAGGCGAGA..........................................................................................................................................................................................................................................................................................2211.00100100000000000000
...............................................................................CTTT--G------ACGACGATGAAGG...............................................................................................................................................................................................................................................................................................1811.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................AACTGGTCTTCTGAAGACTGTC..2211.00101000000000000000
................................................................................TTT--G------ACGACGATGAAGGCG.............................................................................................................................................................................................................................................................................................1911.00100010000000000000
......................................................................................................AGGCGAGACTGTGGTGCA................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AACTTGTGATCGACAACAAAACTGGT.................2611.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AAAACTGGTCTTCTGAAGA.......1911.00100100000000000000
.....................................................................................G------ACGACGATGAAGGCGAGACT........................................................................................................................................................................................................................................................................................2111.00100100000000000000
................................................................................................CGATGAAGGCGAGACTGTG.....................................................................................................................................................................................................................................................................................1911.00100000000000100000
CTG------------------------------------------------------------------------AGACCTTT--G------ACGACGATGAA.................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CAACAAAACTGGTCTTCTGAAGACTGTC..2811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................AACTGGTCTTCTGAAGAC......1811.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AAAACTGGTCTTCTGAAGACTGT...2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GTGATCGACAACAAAACTGGT.................2111.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AAACTGGTCTTCTGAAGA.......1811.00100000000010000000
............................................................................................................GACTGTGGTGCAGACTTCGC........................................................................................................................................................................................................................................................................2011.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................GTGATCGACAACAAAACTGGTCTTCT............2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CAACAAAACTGGTCTTCTGAAGACTGT...2711.00101000000000000000
..................................................................................T--G------ACGACGATGAAGGCGA............................................................................................................................................................................................................................................................................................1811.00100100000000000000
..........................................................................................................GAGACTGTGGTGCAGACC............................................................................................................................................................................................................................................................................1811.00100010000000000000
..................................................................................T--G------ACGACGATGAAGGCGAGACTGTGGT...................................................................................................................................................................................................................................................................................2711.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AAACTGGTCTTCTGAAGACTGTC..2311.00101000000000000000
........................................................................................................GCGAGACTGTGGTGCAGACT............................................................................................................................................................................................................................................................................2011.00100000000000100000
droSec2
AAC---------------CCT--------------------------------------------------------------T-------------GATGATCAAGACACAATTGTTCAAAATTCGGTAAGTTTTACA---GTATGCACAA----CAA-------------------------AAGG---------------TAAC-------------------------------------------------------------------------------AT-ATTCCTAAAT------------ATTTT-------------CTTTCCTTACTAGCTTATAAAACTAGTGATCGACAATAACACAGGCCGCTTGAAAACCGTTGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AAT---------------CCACGCTGGAAGTGCCTAAGCGTTTCAAGAAGGTTCACTCGCTGAAGAATGCTACTGAGACCTTT--G------ACGACGATGAGGGAGAGACTGTGGTGCAGACTTCGGTACGTTATTGG---TT--------TT--------------------------------------------AGGCTC---------------------------AT-----TTT---GTAACTT-----------------------------------AA-GTAACATTGT------------GATTT-------------CTTCCTTTAATAGCAAGTCAAACTCGTGATCGATAACAAAACTGGTCTTCTTAAGACTGTCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................CGTGATCGATAACAAAACTGGT.................2218.00810000070000
AAT---------------CCACGCTGGAAGTGCCTAAGC.................................................................................................................................................................................................................................................................................................................................................................2414.00401000030000
.................................................................................................GATGAGGGAGAGACTGTGGTGC.................................................................................................................................................................................................................................................................................2213.00300300000000
.AT---------------CCACGCTGGAAGTGCCTAAGC.................................................................................................................................................................................................................................................................................................................................................................2313.00300000030000
............................................................................................................................................................................................................................................................................................................................................................AAACTCGTGATCGATAACAAAACTGGT.................2713.00310000020000
....................................................................GCTACTGAGACCTTT--G------AC..........................................................................................................................................................................................................................................................................................................1812.00220000000000
...................CACGCTGGAAGTGCCTAAGC.................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
..................................................................ATGCTACTGAGACCTTT--G------AC..........................................................................................................................................................................................................................................................................................................2012.00220000000000
..............................................................................................GACGATGAGGGAGAGACTGTGGTGCAGA..............................................................................................................................................................................................................................................................................2812.00200000020000
.....................................................CACTCGCTGAAGAATGCTACTGAG...........................................................................................................................................................................................................................................................................................................................2412.00220000000000
..................CCACGCTGGAAGTGCCTAAGC.................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
....................................................................GCTACTGAGACCTTT--G------ACGACGAT....................................................................................................................................................................................................................................................................................................2412.00210000010000
..............................................................................CCTTT--G------ACGACGATGAGGGA..............................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................ATGAGGGAGAGACTGTGGTGCA................................................................................................................................................................................................................................................................................2211.00100000010000
.AT---------------CCACGCTGGAAGTGCCTAAGCG................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.................................................................................TT--G------ACGACGATGAGGGAGAGA..........................................................................................................................................................................................................................................................................................2111.00100000010000
...............................GCCTAAGCGTTTCAAGAAGGTTCACT...............................................................................................................................................................................................................................................................................................................................................2611.00100000010000
....................................................................................................GAGGGAGAGACTGTGGTGCAGACTTC..........................................................................................................................................................................................................................................................................2611.00100000010000
.................................................................................................GATGAGGGAGAGACTGTGGTGCA................................................................................................................................................................................................................................................................................2311.00100000010000
.................................................................................TT--G------ACGACGATGAGGGAGAGACTGT......................................................................................................................................................................................................................................................................................2511.00100000010000
............................................................................GACCTTT--G------ACGACGATGAGGGAGA............................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................TGAGACCTTT--G------ACGACGAT....................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................CACTCGCTGAAGAATGCTACTGAGACC........................................................................................................................................................................................................................................................................................................................2711.00110000000000
.........................................TTCAAGAAGGTTCACTCGCT...........................................................................................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................TACTGAGACCTTT--G------ACGACGA.....................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................GTGATCGATAACAAAACTGGTC................2211.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................AACTCGTGATCGATAACAAAACTG...................2411.00101000000000
................................................................................TTT--G------ACGACGATGAGGGAGAGACT........................................................................................................................................................................................................................................................................................2411.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................ATAACAAAACTGGTCTTCTTAAG........2311.00100000010000
....................ACGCTGGAAGTGCCTAAGC.................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.............................................AGAAGGTTCACTCGCTGAAGAATGC..................................................................................................................................................................................................................................................................................................................................2511.00100000010000
......................................................................TACTGAGACCTTT--G------ACGACGATG...................................................................................................................................................................................................................................................................................................2311.00110000000000
........................................................TCGCTGAAGAATGCTACTGAGACCT.......................................................................................................................................................................................................................................................................................................................2511.00100100000000
.......................................GTTTCAAGAAGGTTCACTCGC............................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................................GTTTCAAGAAGGTTCACTCGCTG..........................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...............................GCCTAAGCGTTTCAAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................................TTCAAGAAGGTTCACTCGCTGA.........................................................................................................................................................................................................................................................................................................................................2211.00100000010000
AAT---------------CCACGCTGGAAGTGCCT.....................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................TCACTCGCTGAAGAATGCTACTGAGA..........................................................................................................................................................................................................................................................................................................................2611.00100000000001
....................................................................GCTACTGAGACCTTT--G------ACGACGATG...................................................................................................................................................................................................................................................................................................2511.00100100000000
.............................................AGAAGGTTCACTCGCTGAAGA......................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................GTCAAACTCGTGATCGATAAC..........................2111.00100000010000
...............................................................................CTTT--G------ACGACGATGAGGGAGAGA..........................................................................................................................................................................................................................................................................................2311.00100000010000
.........................................................CGCTGAAGAATGCTACTGAGAC.........................................................................................................................................................................................................................................................................................................................2211.00100000010000
..............................................................................CCTTT--G------ACGACGATGAGGGAGAGACT........................................................................................................................................................................................................................................................................................2611.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................CAAACTCGTGATCGATAACAAAACTGGT.................2811.00100000010000
.....................................................CACTCGCTGAAGAATGCTACTGAGACCT.......................................................................................................................................................................................................................................................................................................................2811.00110000000000
.................................CTAAGCGTTTCAAGAAGGTTCACT...............................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................CTACTGAGACCTTT--G------ACGA........................................................................................................................................................................................................................................................................................................1911.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................AACTCGTGATCGATAACAAAACTGGT.................2611.00110000000000
.......................................GTTTCAAGAAGGTTCACTCGCT...........................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................................................................................................GAGAGACTGTGGTGCAGACTTC..........................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................G------ACGACGATGAGGGAGAGACTGT......................................................................................................................................................................................................................................................................................2311.00110000000000
...............................................................................CTTT--G------ACGACGATGAGGGAGAGACTGTG.....................................................................................................................................................................................................................................................................................2811.00100000010000
..............................................................................................GACGATGAGGGAGAGACTGTGGT...................................................................................................................................................................................................................................................................................2311.00100000010000
......................................................................TACTGAGACCTTT--G------ACGACGATGAGGG...............................................................................................................................................................................................................................................................................................2711.00100000010000
...........................................................CTGAAGAATGCTACTGAGACCTT......................................................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................TTT--G------ACGACGATGAGGGAGA............................................................................................................................................................................................................................................................................................2011.00100000010000
.AT---------------CCACGCTGGAAGTGCCTA....................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................................GAGAGACTGTGGTGCAGACTTCGC........................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................TTT--G------ACGACGATGAGGGAGAGA..........................................................................................................................................................................................................................................................................................2211.00100000010000
..................................................................ATGCTACTGAGACCTTT--G------ACGACGAT....................................................................................................................................................................................................................................................................................................2611.00110000000000
...................................AAGCGTTTCAAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................1811.00100000010000
....................................................................................................GAGGGAGAGACTGTGGTGCAGA..............................................................................................................................................................................................................................................................................2211.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................CTCGTGATCGATAACAAAACTGGT.................2411.00100000010000
............................................................TGAAGAATGCTACTGAGACC........................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................................................................GAGGGAGAGACTGTGGTGCAGACTTCG.........................................................................................................................................................................................................................................................................2711.00100000010000
..................................................GTTCACTCGCTGAAGAATGCTACTGA............................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................................GTTTCAAGAAGGTTCACT...............................................................................................................................................................................................................................................................................................................................................1820.50100100000000
droEre2
CAC---------------TG-------------------------------------------------------AGACCTAT--G------ACGATGTTGAAGGAGAGACTGTGGTGCAGACTTCGGTAAGTTACTGA---GT--------TC-------------------------------A--------------GCTC---------------------------A-----TTTT---GTGTGGA-----------------------------------AA-GTAACATTGT------------GATGC-------------CTTCCTTTAATAGCAAATCAAACTTGTGATCGACAACAAAACCGGTCTGCTGAAGACTGTCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................TGAAGGAGAGACTGTGGTGCA................................................................................................................................................................................................................................................................................2114.0040001300
.........................................................................................................................................................................................................................................................................................................................................................ATCAAACTTGTGATCGACAACA.........................2212.0022000000
.................................................................................AT--G------ACGATGTTGAAGGAGAGA..........................................................................................................................................................................................................................................................................................2112.0020000200
.................................................................................................GTTGAAGGAGAGACTGTGGTGCA................................................................................................................................................................................................................................................................................2312.0020000200
...............................................................................CTAT--G------ACGATGTTGAAGGAG.............................................................................................................................................................................................................................................................................................2012.0020000110
.........................................................................................................................................................................................................................................................................................................................................................ATCAAACTTGTGATCGACAAC..........................2111.0010000100
............................................................................................ACGATGTTGAAGGAGAGA..........................................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................AACAAAACCGGTCTGCTGAAGACT.....2411.0010000100
......................................................................................................AGGAGAGACTGTGGTGCAGACTTC..........................................................................................................................................................................................................................................................................2411.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................AACAAAACCGGTCTGCTGAAGAC......2311.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................AACAAAACCGGTCTGCTGA..........1911.0010000010
.....................................................................................................AAGGAGAGACTGTGGTGCAGAC.............................................................................................................................................................................................................................................................................2211.0010000100
................................................................................................................................................................................................................................................................................................................................................................TTGTGATCGACAACAAAACCGGT.................2311.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................AAACCGGTCTGCTGAAGACT.....2011.0010000100
..................................................................................................TTGAAGGAGAGACTGTGGTGCAGAC.............................................................................................................................................................................................................................................................................2511.0010000100
.................................................................................................GTTGAAGGAGAGACTGTGGTGCAGAC.............................................................................................................................................................................................................................................................................2611.0010001000
............................................................................GACCTAT--G------ACGATGTTGAAGGAG.............................................................................................................................................................................................................................................................................................2311.0010000100
..............................................................................................GATGTTGAAGGAGAGACT........................................................................................................................................................................................................................................................................................1811.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................CAACAAAACCGGTCTGCTG...........1911.0010000100
..........................................................................................................................................................................................................................................................................................................................................................TCAAACTTGTGATCGACAACA.........................2111.0010001000
.....................................................................................................AAGGAGAGACTGTGGTGCAGACT............................................................................................................................................................................................................................................................................2311.0010000100
.................................................................................................GTTGAAGGAGAGACTGTGGTGCAGACT............................................................................................................................................................................................................................................................................2711.0010000100
..............................................................................................................CTGTGGTGCAGACTTCGC........................................................................................................................................................................................................................................................................1811.0010000010
...................G-------------------------------------------------------AGACCTAT--G------ACGATGTTGAA.................................................................................................................................................................................................................................................................................................2111.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................ATCGACAACAAAACCGGTCTGCTGAA.........2611.0010000100
.........................................................................................................AGAGACTGTGGTGCAGACTTCTC........................................................................................................................................................................................................................................................................2311.0010000100
..................................................................................................TTGAAGGAGAGACTGTGGTGC.................................................................................................................................................................................................................................................................................2111.0011000000
................................................................................TAT--G------ACGATGTTGAAGGAGAGA..........................................................................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................................AACTTGTGATCGACAACAAAACCGGT.................2611.0010000100
.......................................................................................................GGAGAGACTGTGGTGCAGACTT...........................................................................................................................................................................................................................................................................2211.0010000100
....................................................................................................GAAGGAGAGACTGTGGTGCAGACTT...........................................................................................................................................................................................................................................................................2511.0011000000
CAC---------------TG-------------------------------------------------------AGACCTAT--G------ACGATGT.....................................................................................................................................................................................................................................................................................................2111.0011000000

Generated: 06/11/2015 at 05:44 PM