ID:

dvi_19892

 Coordinate:

scaffold_13049:14027562-14027744 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.8 -8.8 -8.6 -7.9

Flybase annnotation

exon [dvir_GLEANR_11823:23]; exon [dvir_GLEANR_11823:22]; CDS [Dvir\GJ11810-cds]; CDS [Dvir\GJ11810-cds]; intron [Dvir\GJ11810-in]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy-
TART_DVLINEJockey-
mature
star
  1. scaffold_12928:511682-511704 +
  2. dvi_19892  scaffold_13049:14027648-14027670 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAACGGCATGCCTTTAAGCCAATTTCACCAACACCTGCAACAACAACAGCGTCTGATTATGAAAAATGCCAAGAGAACGACACACAGCAGCAACAATCGCAGCAAGAACACCAGCAGCAGCAGCAGCAGCAGCAACAGCAACCAGCTACGGGTCAACTAAATCCCGCTGCCTCATTAGAGGCATTAGAGGTGTTAACTAAAACGCATCCGGACTTTATGTTTGTCCGAACAAGCGGCCAACAAAGCGAGCCGCTTGCTGCTGCTGTTACTGCAGCAGCAACAA
****************************************************************.......((.............((.((.......((.((..........)).)).......)).))...............))**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 SRR060681
Argx9_testes_total
 SRR060674
9x140_ovaries_total
 V053
head
 SRR060669
160x9_females_carcasses_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
 SRR060672
9x160_females_carcasses_total
................................................................AATGCCAAGAGAACGACACACAGC................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................AACGACCGCGTCTGATTA................................................................................................................................................................................................................................ 18 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................AGCAGCAGCAACAGCAACCAGCT........................................................................................................................................ 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................ACTAAATCGCATCCGGAAGT.................................................................... 20 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................AGGGGCATTGGAGGTGTTCA....................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................GCAGCAGCAGCAGGAACAGCAACC............................................................................................................................................ 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGCAGCAGCAGCAACAGCAA.............................................................................................................................................. 20 0 20 0.10 2 0 0 0 0 0 0 0 2 0 0
.....................................................................................AGCAGCAACAATCGCGGC.................................................................................................................................................................................... 18 1 10 0.10 1 0 0 0 0 0 0 0 0 1 0
..............................................................................................AATGGCCGCAAGAACACC........................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................................AGCAGCAGCAACAGCAACC............................................................................................................................................ 19 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0
..................CCAATTGCACCAATACCGG...................................................................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................ACACCAGCAGCAGCAGCAGCAGCGG....................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
......................................................................................................................AGCAGCAGCAGCAGCAACAGCAA.............................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................ACACCAGCAGCAGCAGCAGCA........................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................GTTACTGACGCAGCGACAA 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................GGGGGCATCAGAGGTGTT......................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CTTGCCGTACGGAAATTCGGTTAAAGTGGTTGTGGACGTTGTTGTTGTCGCAGACTAATACTTTTTACGGTTCTCTTGCTGTGTGTCGTCGTTGTTAGCGTCGTTCTTGTGGTCGTCGTCGTCGTCGTCGTCGTTGTCGTTGGTCGATGCCCAGTTGATTTAGGGCGACGGAGTAATCTCCGTAATCTCCACAATTGATTTTGCGTAGGCCTGAAATACAAACAGGCTTGTTCGCCGGTTGTTTCGCTCGGCGAACGACGACGACAATGACGTCGTCGTTGTT
****************************************************************************************************************************************.......((.............((.((.......((.((..........)).)).......)).))...............))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060660
Argentina_ovaries_total
 V116
male body		 SRR060658
140_ovaries_total
 SRR060672
9x160_females_carcasses_total
 V053
head
 V047
embryo
 SRR060675
140x9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 GSM1528803
follicle cells		 M047
female body
 SRR060678
9x140_testes_total
.........................................TTGCTGGCGCAGACTAAT................................................................................................................................................................................................................................ 18 2 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
.........................GTGGTTGTGGACGCTGTTGTA............................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTTGTGGTCGTCGTCGTC................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....CCGTAAGGTAATCCGGTTAAAG................................................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................GATATTTAGGGCGACGGAGT............................................................................................................. 20 3 8 0.38 3 0 0 0 0 3 0 0 0 0 0 0 0
..........................TGGTTGTGGACGCTGTTGTA............................................................................................................................................................................................................................................. 20 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..........GGAAAGTCGGTTCAAGTGG.............................................................................................................................................................................................................................................................. 19 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................TGGTTGTTGTCGTAGACTTATA............................................................................................................................................................................................................................... 22 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
.........CGGAAATGCGGTTCACGTGG.............................................................................................................................................................................................................................................................. 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................GTCGTTCGTATGGTCGTGGTC................................................................................................................................................................... 21 3 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0
.........CGGAAAGGCGGTTCAAGTGG.............................................................................................................................................................................................................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................TGTATTTAGTGCGACGGAGT............................................................................................................. 20 3 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................TGGAAGTGGACGTTGTGGTTGT........................................................................................................................................................................................................................................... 22 3 18 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................AACTGGTTATTGACGTTGTTGTT............................................................................................................................................................................................................................................. 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................TTATGTCGGGCGACGGAGT............................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTGGTCGTCGTCGTCGTCGT........................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................................CGGCGAACGACGACGGCAAC............... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:14027512-14027794 - dvi_19892 GAACGG---------------------------CATG--------CCTTTAAG--------------CC------AATTTCACCAACA--CCTGCAA---CAACAACAGCGTCTG-ATTATGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGCCAAGAGAACGACACACAG---------------------------------CAG------------------------CAACAATCGCA---------GCAAG------AACACCAGCAGCAGCAGCAGCAGC-----------------------------------------------------------------------------------------------AGCAACAG----------------------------------------------------------------CAACCA-----GC-TAC---G------------------------------------------------GGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCCGCTG---------------------CCTCATTAGAGGCATTAGAGGT-GTTAACTA---------------------------------AAAC------------------------GCATCCGGACTTTATGTTTGTCCGAACAAGCGGCCAACAAAGCGAGCC-------GCTTGCTG------------------CTG---CTGT-------TACTGCAGCAGCAACAA---
droMoj3 scaffold_6680:13287032-13287293 + GAACGA---------------------------CATG--------CCTTTAAG--------------CC------AATTTCGCCGACA--CCTTCGA------CAACAGCAACAA-------------------------------------------CAGC------------------------------------------------------------------------------------AAC----------------------------------------GGCAGCAGCAGCAGC------------------AT----------------------CGCC-----AGCACAG---------------------------------CAG---------------------CAACA---GT------------------------------------TGCAGCGGGAGC-----------------------------------------------------------------------------------------------AACAGCAG----------------------------------------------------------------CCAGCA-----GC-AGCGACG------------------------------------------------GGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCTGCTG---------------------CCTCATTAGAGGCATTAGAGGT-GTTAACTA---------------------------------AAAC------------------------GCATCCGGACTTTATGTTTGCGCGCAC---CAAGCCACAAAACGAGCA-------AATTGCAG------------------CAG---CAAC-------AGCAGCAGCAGCAACAA---
droGri2 scaffold_15110:16173894-16174197 + GAACGG---------------------------CATG--------CCTTTAAG--------------CC------AATTTCGCCAACA--CCTGCGA------CAACAGCAGCAG----------------------------------------C---------------------------------------------------------------------------------------AGCAGC----------------------------------------ACCAAC------------------GACAACAACATTGTCTGATTATGAAAAACGCGAAGCCAACGAAGCACAA------------------CAG------------CAA------------------------CAACAGT---------------------------------------TGCAACAAC-----------------------------------------------------------------------------------------------AA---CAA----------AAACAGGAGCAGGTAA-----CAGACC----------------A------------------------------------------------------------------------------ACA-----------------------------TCA---------------------------GCT---------------------------------------------------------------------------------------------------GCGGCAGCAACTAAATCCCGCCG---------------------CCTCATTAGAGGCATTAGAGGT-GCTAACTA---------------------------------AAAC------------------------GCATCCGGACTTTATGTTTGCTCGACCCAGTGCCAAACAAAGCGCGCC-------AATTGGT---------------------------GC-------AGCAGTTGCACCAACAA---
droWil2 scf2_1100000004762:4627133-4627473 + GAGCGT---------------------------CATG--------CCTTTAAG--------------CC------AATTTCACCCACA--CCAGCAA------CAACAGCAACAA----------------------------------------T---------------------------------------------------------------------------------------AACAAC----------------------------------------AGCAAC------------------AGCAACAT--------------------------------------C---------------------------------ATCAGCAACAGCTGCTCCT---------------------------------------------------------GCTGCCGA------------AGAAGATGCGGCAGCAACAGCAGTTGAGAGCATAGAGCCAGATTTAACTAAAGCTAAACTGCAACACCAGCAGCAGCAGCAACAGCAGCAA----------------------------------------------------------------CAACACAAGCACA-TACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACTAAATCCCGCCG---------------------CCTCATTGGAGGCATTAGAGGT-GCTAACTA---------------------------------AAAC------------------------GCATCCAGACTTTAAGTTTACACAACCAAGAAAGGAACACAGCGAGCA-------AATGATT-----------------A-TTTCTGCCGC-------ATCAGCGGAAGC--------
dp5 XR_group6:2785259-2785526 - GAGCGG---------------------------CATG--------CCTTCAAG--------------CC------AATTTCACCAACT--CCCGCCA------T---GGCAGCTG-------------------------------------------CTGGACCAGAGGAGGCAG---------------------------------------------------AA----------------------------------------------------------------------------GA---------------AT----------------------CAGA-----GGCACAG------------------------------------GAA------------------CAGCA---------------------------------------GCAGCAGAAGCCAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------------------------------------------------------CCCCCT-----GG-TACAACT------------------------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCCGCCG---------------------CCTCATTAGAGGCATTAGAGCT-TCTAACTA---------------------------------AAAC------------------------GCATCCAGACTTTATGTTCCCGCGGTCAAGCTACCCACAGAACGAGCCC-------ACCACGGAGGAGGGAAT---------------AGA-------ATTATCCGCACGGCCAT---
droPer2 scaffold_9:1076543-1076822 - GAGCGG---------------------------CATG--------CCTTCAAG--------------CC------AATTTCACCAACT--CCCGCCA------T---GGCAGCTG-------------------------------------------CTGGACCAGAGGAGGCAG---------------------------------------------------AA----------------------------------------------------------------------------GA---------------AT----------------------CAGA-----GGCACAG------------------------------------GAA------------------CAGCA---------------------------------------GCAGCAGCAGCCAC-----------------------------------------------------------------------------------------------AGAAGCAG----------------------------------------------------------------CCCCCT-----GG-TACAACT------------------------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCCGCCG---------------------CCTCATTAGAGGCATTAGAGCT-TCTAACTA---------------------------------AAAC------------------------GCATCCAGACTTTATGTTCCCGCGGTCAAGCTACCCACAGAACAAGCCC-------ACCACGGAGGAGGGAATAGAATTATCTG---CACG-------GCCATCATCAGCACAAG---
droAna3 scaffold_13337:20188386-20188682 + CAGCGG---------------------------CTGC--------CGCT------------GCAA-------------------A--------ACAACAGCAGCAGCAGCAACAACAGCAGGCC----------------------------------C----------------------------------------------------------------------------------------------------------------------------------AACAGCAGC---------------------A------------------ACAAGTGGCCAC-----GGCCCAG---------------------------------------------------------------------------------CAGCAGCAACAACAAC---------AGCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGCAAC-----AGGCAC----------------AGCA-----------------------------------------------------------------------------------------------------------ACA---------------------------GCAGCAGCA-------------------------------------------------------------------------------------------------------CCAGACCATGCCGCAGTACAATTCTGCCACGCATTCGCAGGCGCTGCACCAAGGAT-TCCAACTATACGCGG---------------------------------------GCCTGAAATCC---------------GGCGGAGTGTCCTCACCAGTGCCCAGCACAG-GA-----------GCCACGC------------------CGG---CGACAGGTTCGGGCAATGCCAAC-CAAA---
droBip1 scf7180000396589:2060693-2060965 - GTCCAG---------------------------CAAC--------------------AGCAGCAG-----------------------------------------------ATT-------------------------------------------CTGGCCCAGAATCCGCAAAACCAAAACGTCTATGTTGTGAATCAGACCAATCTAGCTCAGCAGCAACAGC-------------------------------------------------------------------------------------AGCAA-----------------------------------------C---------------------------------AACAACAACAGCAGCTCGTGCAGCAGCAACAAATGTTGC---AA------CAGCA---------------------GCAGCAAC-----------------------------------------------------------------------------AGCCGATAATGC------CACAGCAG----------------CAGCAG------------------------------------------CAACGAATGCAA-ATGCA---GTCGCAACCGCAACAAATCGTTGTCAACCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATT----------------------------------------------------------------------------------------CTGAGCGATC--------CTCAGCGG------------------TTG---CAAT-------ACTTGCAGCAACAACAA---
droKik1 scf7180000302685:196348-196590 + CAACAG---------------------------CATT--------TACAGCAG---CAGCAGCAGCAGC------ATTTACAGCAG-----------------CAGCAGCAACAG-------------------------------------------CATC----------------------------------------------------------------------------------------------------------------------------TACAGCAGCAGCAGCAACATCACCAGCAGCAA-----------------------------------------CAA------------------------------------CAA------------------CAGCA---------------------------------------TCTACAGCAGCAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CTGCAGCAACATC-----TAC----------------AGCAGCAACAGCA-----------------------------------------------------------------------------------------------------GCAGCA------TCATCTACAGCAGCA------GCAGC---------ATCT-------------------------------------ACAGCAA--------CAGCAG---CATCTA------------CAGC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------AGCAGCAGCAG------------------CAG---CATC-------TACAGCAGCAGCAGCAG---
droFic1 scf7180000453851:86708-86998 + AGGCGA---------------------------CATT--------GCA----G------CCACAG--CC------AA------GAGAA-----ACAGCAACAACAACAGCAACATCAGTAAAAG----------------------------------------------------------------------------------------------CAACACCAA----------------------------------------------C---------------------------------------AGCAACAA--------------------------------------CAG---------------------------------CAG------------------------CAATAGTAGCA---------GCAGCA---------------ACATCAGCATTAGC-----------------------------------------------------------------------------------------AGCAACAGCAACAA----------------------------------------------------------------CAACTC-----GGAGACA--------------------------------------------------GCGGCAACATAATTATTCATGCGCGCTTATCGCCAGTAAGGTAGGCAACACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTTAACCACAAGCGGATTATAATTATCAACAGTTGCCATCAGAACTGACAGACAGCCGG---------------------------------------------------ACGG-----------------A------CAGTTG-CTAC-T------TGA-------AGGCGCAGCAGCAACAG---
droEle1 scf7180000491104:2811984-2812261 - AAACGC---------------------------TGCG--------CATGCAG---------------CAGATGATGGCTCCATCGATG--CC--CAA------CATCAGCAACAT----------------------------------------GTAC-----------------------------------------------------------CATCACCAG----------------------------------------------C---------------------------------------AGCAA-----------------------------------------C---------------------------------AACAGCAACATCTGCCCCTCCAGCAGCAGCA---------------------------------------GCAGCAGCAGCAGC-----------------------------------------------------------------------------------------------AACAGCAG----------------------------------------------------------------CAACCA-----GT-GATGA-------------------------------------------------GCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCAGAGCATGCAG---------------------A-ATGTCAACGATTTCACAGGT-GGCTATCA---------------------------------GAAC-----GGCAGCCTGGAGTACAGACGCAGTCAG-CTCCATGATCCAACCACTCT--------------GTACG-------AGTTGCAG------------------CAG---CAAC-------AGTTGCACCAGCAACAG---
droRho1 scf7180000777865:82560-82859 + GAACGGAAGCCTAGGCAATATAGGCCACGGCTGCAACATCAACAGCAGCAATT--------------GC------AACCACA--------TTTGCAG------CAGCAACAACAG----------------------------------------TTGC---------------------------------------------------------------------------------AGCAGCAACAACAG----------------TTGCAGCAGCAACAACTAGAGCAGCAGCAACAACAAC-----------------------------------------------------------AACA---------------------------------------------------------------------------------------------GCAGCAGCAGCAAC-----------------------------------------------------------------------------------------------AACTACAG----------------CAGCAGCAACAAC-----AAC----------------TACAGCAGCAGCA-----------------------------------------------------------------------------------------------------GCAGCAAAAACTG------CAGCAACAACCAGTGCAAC---------AGCA-------------------------------------ACAGCAA--------GTGCAG---CAACTC----------------------------------------------------------CATCAACCGC--------------------------------------------------------------------------------------------------------------------------------------AACAGCAG------CAGCAACATGTGCTG---CAAA-------CGCAACAGCCACAACAG---
droBia1 scf7180000302193:4285689-4285949 - CAGTTG---------------------------CAAG--------CACCACAG--------------CA------ACAATTGCAAACACCTCAGCAA------CAACAGCAACAG----------------------------------------TTAC---------------------------------------------------------------------------------AGGCA----------------------------C---------------------------------------CGCAACAA--------------------------------------CAG---------------------------------CAG------------------------CAACAGTTGCAGACTCCTCAGCAACA---------------GCAGACACAGCAAC-----------------------------------------------------------------------------------------------AGCAACAA----------CAACAGCAACAGGTGC-----TGGCCC----------------A------------------------------------------------------------------------------TCA-----------------------------GCAGCAGCATAAGCCG------AAAT------------------------------------------ATCCAACCTATGCGCAATACCAGTCGACAA--------ATGCCGCAGCTAAT---------------GC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------A---GCCGCAGCAGATGCAGTGG-ATA-------------------CTTTGCAACAACAACAA---
droTak1 scf7180000415281:199327-199600 + AA-CAA---------------------------CAAA--------ATTCTACG--------------CC------CACCAGGAGGCGG--CCAGCTA------CGAAAGGGGCGTGGATGTGGGCGACGAGGAGGCGCTGCTGCTGAC---------------------------------------------------------CAA---------------CC----------------------------------------------------------------AA--------------------------------------------------------------------CAGCAGCAACAGCGGCGACAACAGCAACAGCAGTTG---CAA------------------CA---------------------GCA------------------GCAGCAGCAGCAACAGCAGCTACAGAGCAACACCTTGCCCCAAAAGAAATCCAAGCTCAAGGGACAAAAGCAGCCAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTGCCAGTGCA-----------------------------------------------------------------------GC---------AG---------------------------------------------------------------CA------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGCAA-------------TGCAG---------CT-------GAG---CTAC-------AGCAGCAACAGCAACAG---
droEug1 scf7180000409538:185229-185497 + AA-CAG---------------------------CA-G--------CAGCAAAA--------------CC------AATTGCAACTGCA--GCAGTAA------CAACAACAACAA-------------------------------------------------------------------------------------------------------------------------------CAGCAACATCCAAACGGCGACAAGCGGTCAAC---------------------------------------AGCAGCAACA------GCAAACGCTGCAGTC--------------------------------------------------------------------------------------GCAGTCGCAGCAGCAGCA---------------GCAGCTGCAGTAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAGCAG------------------------------------------CAACGCTAGCGT-CGGCA---GCGACGCCAGCAGCATGTCCAAAACAAGCAGCGGGAATCCGAGTGCA-----------------------------------------------------------------------GC---------AG---------------------------------------------------------------CA------------ACACAAGC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------A---GCAGCAG------------------CCG---CTGC-------AGCAGCAGCAGCAGCAAGTG
dm3 chr2R:10396133-10396406 + AATTGG---------------------------CAAC--------TTTTTGCT--TCAGCAGCAA---------------------CG--CCAACAA---CAGCAACAGCAACTA-------------------------------------------CTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------GTTCACGCTGCAGGCGGCGGC-----AGCACAG---CAGCAGCAGC------------------AACAACAAC---------------------------------------------------AACAGCAC------CAGCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CAAGC------------AAC--------------------------AAGTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATT---------------------CCTTGGGCAAGACATTACCAGTGGCTCTCCG---------------------------------CAAC------------------------GGAACCCAACAGTTCTTGTCTCCTAAC---CTGATCGCACAGCAACATCAGC---AGCAGCAG------------------CAG---CAAC-------AACTGGAGCAACATCAA---
droSim2 2r:11095101-11095362 + AATTGG---------------------------CAAC--------TTTTTGCT--TCAGCAGCAA---------------------CG--CCAGCAG---CAGCAACAGCAACTA-------------------------------------------CTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------GTTCACGCTGCAGGCGGCGGC-----AGCACAG---------------------------------------------------------------------------------CAGCAGCAACAACAGCAC------CAGCAACAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CAAGC------------AAC--------------------------AAGTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATT---------------------CCTTGGGCAAGACATTACCAGTGGCTCTCCG---------------------------------CAAC------------------------GGAGCCCAGCAGTTCTTGTCTCCCAAC---CTGATCGCACAGCAACATC------AGCAGCAG------------------CAG---CAGC-------AACTGGAGCAACATCAA---
droSec2 scaffold_2:6680594-6680883 - AA-CAA---------------------------CAAG--------TTGTAATGCATCATCAGCAG---------------------CA--TCAGGTG------C---AGCAAGTGCAG----------------------------------------------------------------------------------------------------------------------------CAGGTTCACT----------------------------------ATCAGCAGCAGCAACAGGAGC-----------------------------------------------------------CCCAGCAGC------------------AGCAGCAAC------------------------AAC---------------------------TGCAC------ATGGAGCAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAGCAGCAAT-----ATGTGC----------------AGCA-----------------------------------------------------------------------------------------------------------TCA---------------------------GCCGCAGCAACCCGCCATCCAGCATACGCAGCAGATTTACTACACTTCCGAGCAAGTCCTGCAACCAAATGCCATAGT---GCAGCATATGCAGCAGCAGAAGAAGC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------AGCAAGTGCTG------------------CAG---CAGC-------AACAGCAGCAGCAGCAA---
droYak3 X:6906440-6906709 - GCTCCG---------------------------CCGC--------CCAC-AA-----------------------------------------ACAACAACAACAACAACAACAG-------------------------------------------CAGTAAC---------------------------------------------------AGCAGCAGCAGCAGCAACAACAACACTAGCAACACT--AA--------------TAAC---------------------------------------AACAA-----------------------------------------CAA------------------------------------TAG------------------CAGCA---------------------------------------GCAGCAGCAGCCAC-----------------------------------------------------------------------------------------------AACAGCAGCAGCAGCAAC----------------AACAA-----CACACCAAACGGTGCGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------GCAACA------ACACCATCAGCAGCA------GCAGC---------ATCA-------------------------------------TCAG-----------------------------------------CAGCAAC---GTGTTGTTG---------------------CCA-----GCAGCAACC--------------------------------------------------------AGC--------------------------------------------------------------------AACAACAGCAA------------------CAG---CTGC-------AGCAGCAGCAGCAACAA---
droEre2 scaffold_4845:16957007-16957292 + AAG--G---------------------------CGGC--------CAAAAGCG--TTGTCAGCAA---------------------TG--CAAATAG---CAGTGGCAACAATTC------AAGCAAAAAGCTGGCTTTGTATCAGTCCCAGAAAA--CA------------------------------------------------------ACAACAGCAAC---------------------------------------------------------------------------------------------------------------------------------------------AGCAGCGAC------------------GACAACAACAACAACACCAGTAG---CA---------------------GCAGCA---------------GCAGCAGCAGCCGC-----------------------------------------------------------------------------------------------AGCAGCAGAGGCAACAAC----------------TAATG-----CTGATA-----------------------------------------------------------------------------AAATGCAAAAGCAACA--------------------------------------------------------------------------------G---------------------------------------------------------------CA------------ACTGAAGCAGCAAC---TTTTTGCTG---------------------CCT-----GCAGCATTAAAGTA-AAAAGTGA---------------------------------AAAC------------------------ACAT-----------------------------------------------------TAGCAA------------------CTA---CTGC-------AAATGCAGCAACAGCGG---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GAACGG---------------------------CATG--------CCTTTAAG--------------CC------AATTTCACCAACA--CCTGCAA---CAACAACAGCGTCTG-ATTATGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGCCAAGAGAACGACACACAG---------------------------------CAG------------------------CAACAATCGCA---------GCAAG------AACACCAGCAGCAGCAGCAGCAGC-----------------------------------------------------------------------------------------------AGCAACAG----------------------------------------------------------------CAACCA-----GC-TAC---G------------------------------------------------GGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCCGCTG---------------------CCTCATTAGAGGCATTAGAGGT-GTTAACTA---------------------------------AAAC------------------------GCATCCGGACTTTATGTTTGTCCGAACAAGCGGCCAACAAAGCGAGCC-------GCTTGCTG------------------CTG---CTGT-------TACTGCAGCAGCAACAA---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................AATGCCAAGAGAACGACACACAG---------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC-----------------------------------------------------------------------------------------------AGCAACAG----------------------------------------------------------------CAACCA-----GC-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC-----------------------------------------------------------------------------------------------AGCAACAG----------------------------------------------------------------CAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC-----------------------------------------------------------------------------------------------AGCAACAG----------------------------------------------------------------CAACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.081000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC-----------------------------------------------------------------------------------------------AGCAACAG----------------------------------------------------------------CAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GAACGA---------------------------CATG--------CCTTTAAG--------------CC------AATTTCGCCGACA--CCTTCGA------CAACAGCAACAA-------------------------------------------CAGC------------------------------------------------------------------------------------AAC----------------------------------------GGCAGCAGCAGCAGC------------------AT----------------------CGCC-----AGCACAG---------------------------------CAG---------------------CAACA---GT------------------------------------TGCAGCGGGAGC-----------------------------------------------------------------------------------------------AACAGCAG----------------------------------------------------------------CCAGCA-----GC-AGCGACG------------------------------------------------GGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCTGCTG---------------------CCTCATTAGAGGCATTAGAGGT-GTTAACTA---------------------------------AAAC------------------------GCATCCGGACTTTATGTTTGCGCGCAC---CAAGCCACAAAACGAGCA-------AATTGCAG------------------CAG---CAAC-------AGCAGCAGCAGCAACAA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................CAACAA-------------------------------------------CAGC------------------------------------------------------------------------------------AAC----------------------------------------GGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201000010
.................................................................................................................AA-------------------------------------------CAGC------------------------------------------------------------------------------------AAC----------------------------------------GGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.132100001
..............................................................................................................................................................CAGC------------------------------------------------------------------------------------AAC----------------------------------------GGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAG---CAAC-------AGCAGCAGCAGCAACA....27200.051000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------CAG---CAAC-------AGCAGCAGCAGCAAC.....24200.051001000
droGri2
GAACGG---------------------------CATG--------CCTTTAAG--------------CC------AATTTCGCCAACA--CCTGCGA------CAACAGCAGCAG----------------------------------------C---------------------------------------------------------------------------------------AGCAGC----------------------------------------ACCAAC------------------GACAACAACATTGTCTGATTATGAAAAACGCGAAGCCAACGAAGCACAA------------------CAG------------CAA------------------------CAACAGT---------------------------------------TGCAACAAC-----------------------------------------------------------------------------------------------AA---CAA----------AAACAGGAGCAGGTAA-----CAGACC----------------A------------------------------------------------------------------------------ACA-----------------------------TCA---------------------------GCT---------------------------------------------------------------------------------------------------GCGGCAGCAACTAAATCCCGCCG---------------------CCTCATTAGAGGCATTAGAGGT-GCTAACTA---------------------------------AAAC------------------------GCATCCGGACTTTATGTTTGCTCGACCCAGTGCCAAACAAAGCGCGCC-------AATTGGT---------------------------GC-------AGCAGTTGCACCAACAA---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GAGCGT---------------------------CATG--------CCTTTAAG--------------CC------AATTTCACCCACA--CCAGCAA------CAACAGCAACAA----------------------------------------T---------------------------------------------------------------------------------------AACAAC----------------------------------------AGCAAC------------------AGCAACAT--------------------------------------C---------------------------------ATCAGCAACAGCTGCTCCT---------------------------------------------------------GCTGCCGA------------AGAAGATGCGGCAGCAACAGCAGTTGAGAGCATAGAGCCAGATTTAACTAAAGCTAAACTGCAACACCAGCAGCAGCAGCAACAGCAGCAA----------------------------------------------------------------CAACACAAGCACA-TACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACTAAATCCCGCCG---------------------CCTCATTGGAGGCATTAGAGGT-GCTAACTA---------------------------------AAAC------------------------GCATCCAGACTTTAAGTTTACACAACCAAGAAAGGAACACAGCGAGCA-------AATGATT-----------------A-TTTCTGCCGC-------ATCAGCGGAAGC--------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................AACAAC----------------------------------------AGCAAC------------------AGCAACAT--------------------------------------C---------------------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.11101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCAGCAGCAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
dp5
GAGCGG---------------------------CATG--------CCTTCAAG--------------CC------AATTTCACCAACT--CCCGCCA------T---GGCAGCTG-------------------------------------------CTGGACCAGAGGAGGCAG---------------------------------------------------AA----------------------------------------------------------------------------GA---------------AT----------------------CAGA-----GGCACAG------------------------------------GAA------------------CAGCA---------------------------------------GCAGCAGAAGCCAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------------------------------------------------------CCCCCT-----GG-TACAACT------------------------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCCGCCG---------------------CCTCATTAGAGGCATTAGAGCT-TCTAACTA---------------------------------AAAC------------------------GCATCCAGACTTTATGTTCCCGCGGTCAAGCTACCCACAGAACGAGCCC-------ACCACGGAGGAGGGAAT---------------AGA-------ATTATCCGCACGGCCAT---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................CTGGACCAGAGGAGGCAG---------------------------------------------------AA----------------------------------------------------------------------------GA---------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000100
droPer2
GAGCGG---------------------------CATG--------CCTTCAAG--------------CC------AATTTCACCAACT--CCCGCCA------T---GGCAGCTG-------------------------------------------CTGGACCAGAGGAGGCAG---------------------------------------------------AA----------------------------------------------------------------------------GA---------------AT----------------------CAGA-----GGCACAG------------------------------------GAA------------------CAGCA---------------------------------------GCAGCAGCAGCCAC-----------------------------------------------------------------------------------------------AGAAGCAG----------------------------------------------------------------CCCCCT-----GG-TACAACT------------------------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTAAATCCCGCCG---------------------CCTCATTAGAGGCATTAGAGCT-TCTAACTA---------------------------------AAAC------------------------GCATCCAGACTTTATGTTCCCGCGGTCAAGCTACCCACAGAACAAGCCC-------ACCACGGAGGAGGGAATAGAATTATCTG---CACG-------GCCATCATCAGCACAAG---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CAGCGG---------------------------CTGC--------CGCT------------GCAA-------------------A--------ACAACAGCAGCAGCAGCAACAACAGCAGGCC----------------------------------C----------------------------------------------------------------------------------------------------------------------------------AACAGCAGC---------------------A------------------ACAAGTGGCCAC-----GGCCCAG---------------------------------------------------------------------------------CAGCAGCAACAACAAC---------AGCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGCAAC-----AGGCAC----------------AGCA-----------------------------------------------------------------------------------------------------------ACA---------------------------GCAGCAGCA-------------------------------------------------------------------------------------------------------CCAGACCATGCCGCAGTACAATTCTGCCACGCATTCGCAGGCGCTGCACCAAGGAT-TCCAACTATACGCGG---------------------------------------GCCTGAAATCC---------------GGCGGAGTGTCCTCACCAGTGCCCAGCACAG-GA-----------GCCACGC------------------CGG---CGACAGGTTCGGGCAATGCCAAC-CAAA---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................GCAA-------------------A--------ACAACAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCC---------------GGCGGAGTGTCC...............................................................................................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACAG-GA-----------GCCACGC------------------CGG---CGACAG.........................2511.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTGCCCAGCACAG-GA-----------GCCACGC------------------CG...................................2811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGCACAG-GA-----------GCCACGC------------------.....................................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------------------------------------------------------------------------------------------CCAGACCATGCCGCAGTACAATTC............................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-GA-----------GCCACGC------------------CGG---CGACAGGTTCGG...................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................TGGCCAC-----GGCCCAG---------------------------------------------------------------------------------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................................................................................AACAGCAGCAGCAGCAACAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.50100000010
...........................................................................................................................C----------------------------------C----------------------------------------------------------------------------------------------------------------------------------AACAGCAGC---------------------A------------------ACAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.204040000
...............................................................AA-------------------A--------ACAACAGCAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.153030000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC---------AGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153030000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGCAAC-----A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000011
...............................................................................................AACAGCAGCAGCAGCAACAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102110000
..................................................................................................AGCAGCAGCAGCAACAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102010001
....................................................................................A--------ACAACAGCAGCAGCAGCAACAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.091100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------AGCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.071010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC---------AGCAGCAAC-----------------------------------------------------------------------------------------------AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG----------------CAGCAGCAAC-----AGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18190.051010000
....................................................................................A--------ACAACAGCAGCAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..............................................................................................CAACAGCAGCAGCAGCAACAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAC---------AGCAGCAAC-----------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGCAAC-----A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------------------------------------CAGCAGCAACAACAAC---------AGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGCAAC-----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
....................................................................................A--------ACAACAGCAGCAGCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.............................................................................................ACAACAGCAGCAGCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
........................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------------------CAGCAGCAACAACAAC---------AGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
......................................................................................................................................................................................................................................................................................................................................................................CCAG---------------------------------------------------------------------------------CAGCAGCAACAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
................................................................................................ACAGCAGCAGCAGCAACAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG----------------CAGCAGCAAC-----A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC---------AGCAGCAAC-----------------------------------------------------------------------------------------------AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.................................................................................................CAGCAGCAGCAGCAACAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------AGCAGCAAC-----------------------------------------------------------------------------------------------AACAGCAG----------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
................................................................................................ACAGCAGCAGCAGCAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droBip1
GTCCAG---------------------------CAAC--------------------AGCAGCAG-----------------------------------------------ATT-------------------------------------------CTGGCCCAGAATCCGCAAAACCAAAACGTCTATGTTGTGAATCAGACCAATCTAGCTCAGCAGCAACAGC-------------------------------------------------------------------------------------AGCAA-----------------------------------------C---------------------------------AACAACAACAGCAGCTCGTGCAGCAGCAACAAATGTTGC---AA------CAGCA---------------------GCAGCAAC-----------------------------------------------------------------------------AGCCGATAATGC------CACAGCAG----------------CAGCAG------------------------------------------CAACGAATGCAA-ATGCA---GTCGCAACCGCAACAAATCGTTGTCAACCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATT----------------------------------------------------------------------------------------CTGAGCGATC--------CTCAGCGG------------------TTG---CAAT-------ACTTGCAGCAACAACAA---SizeHit CountTotal NormTotal
No Reads
droKik1
CAACAG---------------------------CATT--------TACAGCAG---CAGCAGCAGCAGC------ATTTACAGCAG-----------------CAGCAGCAACAG-------------------------------------------CATC----------------------------------------------------------------------------------------------------------------------------TACAGCAGCAGCAGCAACATCACCAGCAGCAA-----------------------------------------CAA------------------------------------CAA------------------CAGCA---------------------------------------TCTACAGCAGCAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CTGCAGCAACATC-----TAC----------------AGCAGCAACAGCA-----------------------------------------------------------------------------------------------------GCAGCA------TCATCTACAGCAGCA------GCAGC---------ATCT-------------------------------------ACAGCAA--------CAGCAG---CATCTA------------CAGC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------AGCAGCAGCAG------------------CAG---CATC-------TACAGCAGCAGCAGCAG---SizeHit CountTotal NormTotal
No Reads
droFic1
AGGCGA---------------------------CATT--------GCA----G------CCACAG--CC------AA------GAGAA-----ACAGCAACAACAACAGCAACATCAGTAAAAG----------------------------------------------------------------------------------------------CAACACCAA----------------------------------------------C---------------------------------------AGCAACAA--------------------------------------CAG---------------------------------CAG------------------------CAATAGTAGCA---------GCAGCA---------------ACATCAGCATTAGC-----------------------------------------------------------------------------------------AGCAACAGCAACAA----------------------------------------------------------------CAACTC-----GGAGACA--------------------------------------------------GCGGCAACATAATTATTCATGCGCGCTTATCGCCAGTAAGGTAGGCAACACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTTAACCACAAGCGGATTATAATTATCAACAGTTGCCATCAGAACTGACAGACAGCCGG---------------------------------------------------ACGG-----------------A------CAGTTG-CTAC-T------TGA-------AGGCGCAGCAGCAACAG---SizeHit CountTotal NormTotal
No Reads
droEle1
AAACGC---------------------------TGCG--------CATGCAG---------------CAGATGATGGCTCCATCGATG--CC--CAA------CATCAGCAACAT----------------------------------------GTAC-----------------------------------------------------------CATCACCAG----------------------------------------------C---------------------------------------AGCAA-----------------------------------------C---------------------------------AACAGCAACATCTGCCCCTCCAGCAGCAGCA---------------------------------------GCAGCAGCAGCAGC-----------------------------------------------------------------------------------------------AACAGCAG----------------------------------------------------------------CAACCA-----GT-GATGA-------------------------------------------------GCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCAGAGCATGCAG---------------------A-ATGTCAACGATTTCACAGGT-GGCTATCA---------------------------------GAAC-----GGCAGCCTGGAGTACAGACGCAGTCAG-CTCCATGATCCAACCACTCT--------------GTACG-------AGTTGCAG------------------CAG---CAAC-------AGTTGCACCAGCAACAG---SizeHit CountTotal NormTotal
No Reads
droRho1
GAACGGAAGCCTAGGCAATATAGGCCACGGCTGCAACATCAACAGCAGCAATT--------------GC------AACCACA--------TTTGCAG------CAGCAACAACAG----------------------------------------TTGC---------------------------------------------------------------------------------AGCAGCAACAACAG----------------TTGCAGCAGCAACAACTAGAGCAGCAGCAACAACAAC-----------------------------------------------------------AACA---------------------------------------------------------------------------------------------GCAGCAGCAGCAAC-----------------------------------------------------------------------------------------------AACTACAG----------------CAGCAGCAACAAC-----AAC----------------TACAGCAGCAGCA-----------------------------------------------------------------------------------------------------GCAGCAAAAACTG------CAGCAACAACCAGTGCAAC---------AGCA-------------------------------------ACAGCAA--------GTGCAG---CAACTC----------------------------------------------------------CATCAACCGC--------------------------------------------------------------------------------------------------------------------------------------AACAGCAG------CAGCAACATGTGCTG---CAAA-------CGCAACAGCCACAACAG---SizeHit CountTotal NormTotal
No Reads
droBia1
CAGTTG---------------------------CAAG--------CACCACAG--------------CA------ACAATTGCAAACACCTCAGCAA------CAACAGCAACAG----------------------------------------TTAC---------------------------------------------------------------------------------AGGCA----------------------------C---------------------------------------CGCAACAA--------------------------------------CAG---------------------------------CAG------------------------CAACAGTTGCAGACTCCTCAGCAACA---------------GCAGACACAGCAAC-----------------------------------------------------------------------------------------------AGCAACAA----------CAACAGCAACAGGTGC-----TGGCCC----------------A------------------------------------------------------------------------------TCA-----------------------------GCAGCAGCATAAGCCG------AAAT------------------------------------------ATCCAACCTATGCGCAATACCAGTCGACAA--------ATGCCGCAGCTAAT---------------GC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------A---GCCGCAGCAGATGCAGTGG-ATA-------------------CTTTGCAACAACAACAA---SizeHit CountTotal NormTotal
No Reads
droTak1
AA-CAA---------------------------CAAA--------ATTCTACG--------------CC------CACCAGGAGGCGG--CCAGCTA------CGAAAGGGGCGTGGATGTGGGCGACGAGGAGGCGCTGCTGCTGAC---------------------------------------------------------CAA---------------CC----------------------------------------------------------------AA--------------------------------------------------------------------CAGCAGCAACAGCGGCGACAACAGCAACAGCAGTTG---CAA------------------CA---------------------GCA------------------GCAGCAGCAGCAACAGCAGCTACAGAGCAACACCTTGCCCCAAAAGAAATCCAAGCTCAAGGGACAAAAGCAGCCAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTGCCAGTGCA-----------------------------------------------------------------------GC---------AG---------------------------------------------------------------CA------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGCAA-------------TGCAG---------CT-------GAG---CTAC-------AGCAGCAACAGCAACAG---SizeHit CountTotal NormTotal
No Reads
droEug1
AA-CAG---------------------------CA-G--------CAGCAAAA--------------CC------AATTGCAACTGCA--GCAGTAA------CAACAACAACAA-------------------------------------------------------------------------------------------------------------------------------CAGCAACATCCAAACGGCGACAAGCGGTCAAC---------------------------------------AGCAGCAACA------GCAAACGCTGCAGTC--------------------------------------------------------------------------------------GCAGTCGCAGCAGCAGCA---------------GCAGCTGCAGTAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAGCAG------------------------------------------CAACGCTAGCGT-CGGCA---GCGACGCCAGCAGCATGTCCAAAACAAGCAGCGGGAATCCGAGTGCA-----------------------------------------------------------------------GC---------AG---------------------------------------------------------------CA------------ACACAAGC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------A---GCAGCAG------------------CCG---CTGC-------AGCAGCAGCAGCAGCAAGTGSizeHit CountTotal NormTotal
No Reads
dm3
AATTGG---------------------------CAAC--------TTTTTGCT--TCAGCAGCAA---------------------CG--CCAACAA---CAGCAACAGCAACTA-------------------------------------------CTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------GTTCACGCTGCAGGCGGCGGC-----AGCACAG---CAGCAGCAGC------------------AACAACAAC---------------------------------------------------AACAGCAC------CAGCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CAAGC------------AAC--------------------------AAGTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATT---------------------CCTTGGGCAAGACATTACCAGTGGCTCTCCG---------------------------------CAAC------------------------GGAACCCAACAGTTCTTGTCTCCTAAC---CTGATCGCACAGCAACATCAGC---AGCAGCAG------------------CAG---CAAC-------AACTGGAGCAACATCAA---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
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S2		V146
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACATCAGC---AGCAGCAG------------------CAA---...............................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC------------------AACAACAAC---------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------CAGCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGC---AGCAGCAG------------------CAG---CA.............................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCAGC---AGCAGCAG------------------CA...................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCAGC---AGCAGCAG------------------CAG---CAAC-------AACA................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC------------------AACAACAAC---------------------------------------------------AACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACATCAGC---AGCAGCAG------------------CA...................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AGC------------------AACAACAAC---------------------------------------------------AACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AG---CAGCAGCAGC------------------AACAACAAC---------------------------------------------------AAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AG---CAGCAGCAGC------------------AACAACAAC---------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG------------------CAG---CAAC-------AAC.................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACATCAGC---AGCA...........................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGC------------------AACAACAAC---------------------------------------------------AACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAGCAG------------------CAG---CAAC-------A...................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCAGC---AGCAGCAG------------------CAG---...............................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAG---CAGCAGCAGC------------------AACAACAAC---------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC------------------AACAACAAC---------------------------------------------------AACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCAGC---AGCAGCAG------------------C....................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC------------------AACAACAAC---------------------------------------------------AACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AATTGG---------------------------CAAC--------TTTTTGCT--TCAGCAGCAA---------------------CG--CCAGCAG---CAGCAACAGCAACTA-------------------------------------------CTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------GTTCACGCTGCAGGCGGCGGC-----AGCACAG---------------------------------------------------------------------------------CAGCAGCAACAACAGCAC------CAGCAACAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CAAGC------------AAC--------------------------AAGTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATT---------------------CCTTGGGCAAGACATTACCAGTGGCTCTCCG---------------------------------CAAC------------------------GGAGCCCAGCAGTTCTTGTCTCCCAAC---CTGATCGCACAGCAACATC------AGCAGCAG------------------CAG---CAGC-------AACTGGAGCAACATCAA---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------------------CAGCAGCAACAACAGCAC------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.75300000300000000000
........................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------------------CAGCAGCAACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------CAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.07100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGCAGCAG------------------CAG---CAGC-------AACTG...............21200.05100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAACAG------------------------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACATC------AGCAGCA........................................................15200.05100000000001000000
..........................................................................................CCAGCAG---CAGCAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATC------AGCAGCAG------------------CAG---CA.............................18200.05100000001000000000
droSec2
AA-CAA---------------------------CAAG--------TTGTAATGCATCATCAGCAG---------------------CA--TCAGGTG------C---AGCAAGTGCAG----------------------------------------------------------------------------------------------------------------------------CAGGTTCACT----------------------------------ATCAGCAGCAGCAACAGGAGC-----------------------------------------------------------CCCAGCAGC------------------AGCAGCAAC------------------------AAC---------------------------TGCAC------ATGGAGCAAC-----------------------------------------------------------------------------------------------AGCAGCAG----------------CAGCAGCAAT-----ATGTGC----------------AGCA-----------------------------------------------------------------------------------------------------------TCA---------------------------GCCGCAGCAACCCGCCATCCAGCATACGCAGCAGATTTACTACACTTCCGAGCAAGTCCTGCAACCAAATGCCATAGT---GCAGCATATGCAGCAGCAGAAGAAGC----------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------AGCAAGTGCTG------------------CAG---CAGC-------AACAGCAGCAGCAGCAA---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................TCACT----------------------------------ATCAGCAGCAGCAACAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACTACACTTCCGAGCAAGT...........................................................................................................................................................................................................................................................................................................2211.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------------------CAG---CAGC-------AACAGCAGCA..........19200.0510010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-------AACAGCAGCAGCAGCAA---19200.0510010
................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC------------------AGCAGCAAC------------------------AAC---------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001
droYak3
GCTCCG---------------------------CCGC--------CCAC-AA-----------------------------------------ACAACAACAACAACAACAACAG-------------------------------------------CAGTAAC---------------------------------------------------AGCAGCAGCAGCAGCAACAACAACACTAGCAACACT--AA--------------TAAC---------------------------------------AACAA-----------------------------------------CAA------------------------------------TAG------------------CAGCA---------------------------------------GCAGCAGCAGCCAC-----------------------------------------------------------------------------------------------AACAGCAGCAGCAGCAAC----------------AACAA-----CACACCAAACGGTGCGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------GCAACA------ACACCATCAGCAGCA------GCAGC---------ATCA-------------------------------------TCAG-----------------------------------------CAGCAAC---GTGTTGTTG---------------------CCA-----GCAGCAACC--------------------------------------------------------AGC--------------------------------------------------------------------AACAACAGCAA------------------CAG---CTGC-------AGCAGCAGCAGCAACAA---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA-------------------------------------TCAG-----------------------------------------CAGCAAC---GTGTT...........................................................................................................................................................................................................................................2012.00200000020000
....................................................................................................CAACAACAACAACAG-------------------------------------------CAGTAAC---------------------------------------------------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------ATCA-------------------------------------TCAG-----------------------------------------CAGCAAC---GTGTTGTT........................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------ACACCATCAGCAGCA------GCAGC---------................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------ATCA-------------------------------------TCAG-----------------------------------------CAGCAAC---GTGTT...........................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................................CAGCAGCAACAACAACACTAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------ACACCATCAGCAGCA------GCAGC---------ATC.............................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCCAC-----------------------------------------------------------------------------------------------AACAGCAGCAGCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-------------------------------------TCAG-----------------------------------------CAGCAAC---GTGTTGTTG---------------------C.................................................................................................................................................................................................................2411.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------GCAACA------A..................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACACCATCAGCAGCA------GCAGC---------ATCA-------------------------------------TC.....................................................................................................................................................................................................................................................................................................2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCAC-----------------------------------------------------------------------------------------------AACAGCAGCAGCAGCAAC----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................................................................................................ACAG-------------------------------------------CAGTAAC---------------------------------------------------AGCAGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCAGCAGCA------GCAGC---------ATCA-------------------------------------TCAG-----------------------------------------CA........................................................................................................................................................................................................................................................2811.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC----------------AACAA-----CACACCAAACGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------ATCA-------------------------------------TCAG-----------------------------------------CAGCAAC---GTGTTGT.........................................................................................................................................................................................................................................2411.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------CCA-----GCAGCAACC--------------------------------------------------------AGC--------------------------------------------------------------------AACAACAGCA........................................................2711.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCAC-----------------------------------------------------------------------------------------------AACAGCAGCAGCAGCAAC----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
..........................................................................................................................................................................................................................................................CT--AA--------------TAAC---------------------------------------AACAA-----------------------------------------CAA------------------------------------TAG------------------CAGCA---------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACACCATCAGCAGCA------GCAGC---------................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------GCAGC---------ATCA-------------------------------------TCAG-----------------------------------------CAGC......................................................................................................................................................................................................................................................2120.50100010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCAC-----------------------------------------------------------------------------------------------AACAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
..............................................................................................................................................................................................................................AGCAGCAGCAACAACAACACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010000000
...............................................................................................................................................................................................................................................................................AAC---------------------------------------AACAA-----------------------------------------CAA------------------------------------TAG------------------CAGCA---------------------------------------GCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCA------GCAGC---------ATCA-------------------------------------TC.....................................................................................................................................................................................................................................................................................................2230.33100000010000
..........................................................................................................................................................................................................................................................................................................................ACAA-----------------------------------------CAA------------------------------------TAG------------------CAGCA---------------------------------------GCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33100100000000
..........................................................................................................................................................................................................................................................................................................................ACAA-----------------------------------------CAA------------------------------------TAG------------------CAGCA---------------------------------------GCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100000010000
............................................................................................................................................................................................................................................................................................................................AA-----------------------------------------CAA------------------------------------TAG------------------CAGCA---------------------------------------GCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.20101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------GCAGC---------ATCA-------------------------------------TCAG-----------------------------------------CA........................................................................................................................................................................................................................................................1970.14100010000000
..................................................................................................AACAACAACAACAACAG-------------------------------------------CAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAAC----------------AACAA-----C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------------------------------------------------------------------------------------------AACAGCAGCAGCAGCAAC----------------AAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
droEre2
AAG--G---------------------------CGGC--------CAAAAGCG--TTGTCAGCAA---------------------TG--CAAATAG---CAGTGGCAACAATTC------AAGCAAAAAGCTGGCTTTGTATCAGTCCCAGAAAA--CA------------------------------------------------------ACAACAGCAAC---------------------------------------------------------------------------------------------------------------------------------------------AGCAGCGAC------------------GACAACAACAACAACACCAGTAG---CA---------------------GCAGCA---------------GCAGCAGCAGCCGC-----------------------------------------------------------------------------------------------AGCAGCAGAGGCAACAAC----------------TAATG-----CTGATA-----------------------------------------------------------------------------AAATGCAAAAGCAACA--------------------------------------------------------------------------------G---------------------------------------------------------------CA------------ACTGAAGCAGCAAC---TTTTTGCTG---------------------CCT-----GCAGCATTAAAGTA-AAAAGTGA---------------------------------AAAC------------------------ACAT-----------------------------------------------------TAGCAA------------------CTA---CTGC-------AAATGCAGCAACAGCGG---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAGTA-AAAAGTGA---------------------------------AAAC------------------------ACAT-----------------------------------------------------T............................................................2611.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................GCGAC------------------GACAACAACAACAACACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................CA------------------------------------------------------ACAACAGCAAC---------------------------------------------------------------------------------------------------------------------------------------------AGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTAG---CA---------------------GCAGCA---------------GCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000

Generated: 05/17/2015 at 04:43 AM