ID:

dvi_19642

 Coordinate:

scaffold_13049:12192608-12192771 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.7 -20.6 -20.5

Flybase annnotation

CDS [Dvir\GJ11926-cds]; exon [dvir_GLEANR_11934:6]; CDS [Dvir\GJ11926-cds]; exon [dvir_GLEANR_11934:7]; intron [Dvir\GJ11926-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTCAGCTGGATACACGACTACCAGGATGCGTGCATCGATAAGCTCGAAAGGTATATTAACGGCGCATTTAGGACTAAATGGATGATGACCAGATAGTGCTTAAATCTCTAGTTAATCAATCAATTAATTCAATTAATTTAAACAATTATCTAATGCGCAAACTCAATCTCAATACATTCCCAACCTTAATTTCCCCCTCTTCCCGGTGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCAGCGATGGCGCCTG
*****************************************************........(((((((.((.((((..(((.......)))..)))).)).........(((((((......)))))))......................)))))))....................((..(((...................)))..))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 M028
head
 V116
male body		 M027
male body		 SRR060668
160x9_males_carcasses_total
 M061
embryo
 SRR060665
9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V047
embryo
 GSM1528803
follicle cells		 SRR060657
140_testes_total
 SRR060659
Argentina_testes_total
 SRR060666
160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106724
embryo_12-14h
 V053
head
 SRR1106728
larvae
 SRR060655
9x160_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060683
160_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR1106713
embryo_0-2h
 SRR1106726
embryo_14-16h
 SRR1106729
mixed whole adult body
 SRR1106723
embryo_12-14h
 SRR060656
9x160_ovaries_total
............CACGACTACCAGGATGCG.......................................................................................................................................................................................................................................... 18 0 1 3.00 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GAATATCGATCGCATTGCA............. 19 0 1 3.00 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AGGATGCGTGCATCGATAAGCTC........................................................................................................................................................................................................................... 23 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..CAGCTGGATACACGAC...................................................................................................................................................................................................................................................... 16 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................AATATCGATCGCATTGCAGCGAT........ 23 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TAATTCCCCCCCGTTCCCGGTG........................................................ 22 3 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................ATTGCAGCGATGGCGCCTG 19 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............GACTACCAGGATGCGTGCAT..................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TCGAAAGGTATATTAACGGC......................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGACTACCAGGATGCGTGCATCG................................................................................................................................................................................................................................... 23 0 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GAAAAGAATATCGATCGC................... 18 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCAG............ 25 0 1 2.00 2 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGACTACCAGGATGCGTGC....................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTTGCGCGGCGAAAAGAATATCG........................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AGAATATCGATCGCATTGCAGC........... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CCTCTTCCCGGTGCGGCAG.................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GAAAGATTTTTGCGCGGCGAA.................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ATATCGATCGCATTGCAGCGATGGCGCC.. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CTCGACTACCAGGATGCGTGCATC.................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TATTAACGGCGCATTTAGGA............................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TGCATCGATAAGCTCGAAAGAT.................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GCTTAAATCTCTAGTTAAT.................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CCAGGATGCGTGCATCGATAAGCTCGA......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GACTACCAGGATGCGTGCATCGATAAGCT............................................................................................................................................................................................................................ 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CACGACTACCAGGATGCGTGCAT..................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CACGACTACCAGGATGCGTGCATCGATA................................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................GCGTGCATCGATAAGCTCG.......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GAATATCGATCGCATTGCAGCGA......... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TACACGACTACCAGGATGCGTG........................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TAGGACTAAATGGATGATGACCAGATA......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCAGC........... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................AGGACTAAATGGATGATGA................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................AGGATGCGTGCATCGATAAGCTCGAAA....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTACCAGGATGCGTGCATCGATAAGCTC........................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGATGCGTGCATCGATAAGCT............................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGCAGCGATGGCGCCT. 34 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................CGCGGCGAAAAGAATATCGATCG.................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CGCATTGCAGCGATGGCGCCT. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGACTACCAGGATGCGTG........................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTACCAGGATGCGTGCATCGAT................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GATACACGACTACCAGGATGCGTGCAT..................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGCGTGCATCGATAAGCTCGAA........................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................AGGATGCGTGCATCGATAAGCTCGAA........................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GTGCATCGATAAGCTCGAA........................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGA.............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGATTACCAGGATGCGTGCATC.................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TACCAGGATGCGTGCATCGATAA............................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGCGTGCATCGATAAGCTCGAAA....................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GAATATCGATCGCATTGCAGCGATGGC..... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GTGCATCGATAAGCTCGATA....................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAATTCCCCCCCCTTCCCGGTG........................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGACTACCAGGATGCGTGCATCGAT................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATACACGACTACCAGGATGCGTGC....................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................ATCGATAAGCTCGAAAGGTATAT................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATACACGACTACCAGGATGCGTGCATCG................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GAAAGATTTTTGCGCGGCGA................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GATGCGTGCATCGATAAGCTCGAA........................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ACTACCAGGATGCGTGCATCGATAAGCT............................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AAAAGAATATCGATCGCATTGCAGCGAT........ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTACCAGGATGCGTGCATCGATAAGC............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................GATCGCATTGCAGCGATGGCGCC.. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........ACACGACTACCAGGATGCGTGC....................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ATATCGATCGCATTGCAGC........... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................TATCGATCGCATTGCAGCG.......... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ATATCGATCGCATTGCAGCGAT........ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAATTCCCCCCTGTTCCCGGTG........................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................ATGCGTGCATCGATAAGCTCGA......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TCGATCGCATTGCAGCGATGGCGCC.. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ACGACTACCAGGATGCGTGC....................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AAGAATATCGATCGCATTGC.............. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ACGACTACCAGGATGCGTGCATCG................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................AAGCTCGAAAGGTATATTAACGGC......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACCAGGATGCGTGCATCGATAAGCT............................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CTCGATCGCATTGCAGCGATGGCGCCGG 28 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................GAAAGGTATATTAACGGCGC....................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ACGACTACCAGGATGCGTGCATCGATA................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TAACGGCGCATTTAGGACT............................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGCGTGCATCGATAAGCTCG.......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGACTACCAGGATGCGTGCATCGATAA............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGC.............. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TACACGACTACCAGGATGCG.......................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GAAAGATTTTTGCGCGGCGAAAAGAAT............................ 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................ATCGATAAGCTCGAAAGGT.................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGAATATC......................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATACACGACTACCAGGATGCGTGCAT..................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CCAGGATGCGTGCATCGATAAGCT............................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATACACGACTACCAGGATGCGTGCATC.................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TACACGACTACCAGGATGCGTGCA...................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ACGACTACCAGGATGCGTGCAT..................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTACCAGGATGCGTGCATCGATA................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CGCAAACTCAAGCTCAATACA........................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GACTACCAGGATGCGTGCATCGATAA............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGAAAGATTTTTGCGCGGCGAAA................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................AATATCGATCGCATTGCAGCGATGGC..... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGACTACCTGGATGCGTGCATCGA.................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATTTTTGCGCGGCGAAAAGA.............................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAATTTCCCCCCCTTCCCGTTG........................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................AAAGATTTTTGCGCGGCGAAAA................................ 22 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAATTTCCCCCCGTTCCCGGTG........................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GCATGGCTGGGATGGCGCCTG 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..CATCTGGATCCATGACTAC................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGGCGCTAACTCCATCTCA............................................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTTGGGCGGCGAGAAGA.............................. 18 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAGTCGACCTATGTGCTGATGGTCCTACGCACGTAGCTATTCGAGCTTTCCATATAATTGCCGCGTAAATCCTGATTTACCTACTACTGGTCTATCACGAATTTAGAGATCAATTAGTTAGTTAATTAAGTTAATTAAATTTGTTAATAGATTACGCGTTTGAGTTAGAGTTATGTAAGGGTTGGAATTAAAGGGGGAGAAGGGCCACGCCGTCTAAAAACGCGCCGCTTTTCTTATAGCTAGCGTAACGTCGCTACCGCGGAC
**************************************************........(((((((.((.((((..(((.......)))..)))).)).........(((((((......)))))))......................)))))))....................((..(((...................)))..))...***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060675
140x9_ovaries_total
 V116
male body		 SRR060668
160x9_males_carcasses_total
 V053
head
 SRR060663
160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
......................................................................................................................................................................................................................................TTCTTGTAGCTAGCGTAACGT............. 21 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................GGAGAACGGCTACGCCGCCTA................................................ 21 3 2 0.50 1 0 1 0 0 0 0
......................................................................................................................................................................................TGGCATTAAAGAGGTAGAAG.............................................................. 20 3 6 0.50 3 0 2 0 0 1 0
......................................................................................................................................TGAAATATGTTAATAGATTA.............................................................................................................. 20 2 4 0.50 2 0 0 2 0 0 0
.............................................................................................................................................................GTTTGAGTTAGAGTTAGCTAAA..................................................................................... 22 3 9 0.11 1 0 0 1 0 0 0
........................................................................................................................................................................................GAATTAGAAGGGGAGAAG.............................................................. 18 2 9 0.11 1 0 0 0 1 0 0
.........................................................................GTCTTACCTGCTACTGGTC............................................................................................................................................................................ 19 3 14 0.07 1 0 0 0 1 0 0
.....................................................................................................................................GTGAAATATGTTAATAGATTA.............................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 1
....................................................................................GAATGGTCTATCACGAAAT................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:12192558-12192821 - dvi_19642 GTCAGCTGGATACACGACTACCAGGATGCGTGCATCGATAAGCTCGAAAGGTATATTAA-CGGCGCATTTAG-------------------------------------GACTAAATGGATGATGA----CCAGATAGTGCT-TAAATCTC------------------------------------TAG--TT-------AATCA----AT-CAAT-------------------------------T-----------AATTCAATTAATTTA-----------------------AACAA--TTAT-CTA---------------------------ATGCG--CAAACTCAATCTCAATAC-----------------ATTCCCAACCTTAATTTCCCCCTCTTCCCGGTGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCAGCGATGGCGCCTG
droMoj3 scaffold_6680:8648816-8649135 + GTCAGCTGGATACACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTATAT-AACCGGCGCCATTCG-------------------------------------GACTAAAGGAATGCTGA----CCAAATAGTGCC-ACAAACCCCAT-TCCCCTCTCTCTCTCTCTTTACCTTTTTACCTAAG--TT-------AGTCA----GT-TAAT-------------------------------TTA--ATGAAAC-ATTCGATTAGTTTAAGTGCAATTAATTTATTCCGTTAAACT-C-G-AT-CCTTAAT---------------------------T--CAATATCAATCTCAATACATTACCAAACTT-----------AA---------------TTTTCCGTTGCGGCAGATTTTTGCGCGGCGAAAAGAATGTCGATCGCATTGCGGCGATGGCGCCTG
droGri2 scaffold_15110:11607977-11608244 - GTCAGCTGGATACACGATTATCAGGATGCGTGCATCGATAAGCTCGAAAGGTATAT-AACCGGCACATTTAG-------------------------------------GACTAAATGGATGACGA----CCAAAT-------------------AATC------------------------------G--AT-------------------CGAT-------------------------------T-----------A-----ATTAATCTA-----------------------AACTA--T-AT-CTATATCTATAT-ATTTATACATATACATTATGCGTACATATTTA----------------ATTTTAAAACAATTCCCACCCTTAATTCTTACCCTCTTCTGATGCGGCAGATTTTTGCGAGGCGAAAAGAATGTCGATCGCATCGCGGCGATGGCGCCCG
droWil2 scf2_1100000004540:64906-65148 + GTCAGTTGGATACATGACTATCAGGATGCATGCATCGATAAGCTCGAAAGGTATATTAAGTGGCGCAACTAG------------------------GATT---TA--AAGACTA---GGAA---------CC--------------AC------------------------------------------------------GCAC----AAGCA-CAAG----------AT-GGCTAAAAATCGAAAA-----------A-----ATAAAACCA-----------------------AACC-A-A-ATATTAAATCTCTATTATATATATGTATATGTA--------------------------------------------ACC--T---------------ATATATTATGCGACAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCCG
dp5 XR_group8:6001243-6001481 + GTCAGCTGGATCCATGACTACCAGGATGCATGCATCGACAAGCTCGAAAGGTATATTAAGCGACGCATTTAGAGACGCGCATGGGAAGCAATTTGGGATCTGGCT--GGGATC-----------------------------T---ACCTCAAT-TCCT------------------------------CA-ATCTTGC--AATTTCTGTGT-CAAT-----T--------------------------TTTC----------------------------------------------------G-----------------------------------------------------------------AAACTCAAATAATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCTG
droPer2 scaffold_45:477638-477876 - GTCAGCTGGATCCATGACTACCAGGATGCATGCATCGACAAGCTCGAAAGGTATATTAAGCGACGCATTTAGAGACGCGCATGGGAAGCAATTTGGGATCTGGCT--GGGATC-----------------------------T---ACCTCAAT-TCCT------------------------------CA-ATCTTGC--AATTTCTGTGT-CAAT-----T--------------------------TTTC----------------------------------------------------G-----------------------------------------------------------------AAACTCAAATAATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCTG
droAna3 scaffold_13337:13549679-13549912 - GTTAGCTGGATCCACGACTACCAGGACGCGTGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAG--------------------CCTGGATTAGCCTTGGGGACTA---GGACGATGGA---------------T---AACTCCAT-TCCC------------------------------G--AT-------AGCCT----GT-TAGC---------TTG-----------------------------------------------------T---TCCAATCTC-ATAAC----------------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGAGGCGAAAAGAATATCGATCGCATTGCGGCAATGGTGCCCG
droBip1 scf7180000396589:502492-502728 + GTTAGCTGGATCCACGACTACCAGGACGCGTGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAG--------------------CCTGGATTAGCCT--GGGACTA---GGACGATGGACGA------------T---AACTCCAT-TCCC------------------------------G--AT-------AGCCT----GT-TAAC-----T--------------------------TTTC-----------------------------T---TCAAATGTC-ATAAC----------------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGAGGCGAAAAGAATATCGATCGCATTGCGGCAATGGTGCCCG
droKik1 scf7180000302274:446682-446917 + GTTAGTTGGATCCACGACTACCAGGACGCCTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------CCTGGATTAGCCT--GGGACTA---GGATGGTGT---------------------ACTCCAT-TACC------------------------------G--AT-------AGCCT----GA-TA--------AC-CAG-----------------------------------------------------TTAATCAACTCCA-AAAACT-T-G-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCCG
droFic1 scf7180000454065:419380-419607 + GTCAATTGGATCCACGACTACCAGGATGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGACT--GGGACTA---GGACGATGGT---------------TT--AGCTCCAT-TACC------------------------------CCGATTAC-----------------------------CAGAATCACTTC----------------------------------------------------------A-AACT-A-------------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCGG
droEle1 scf7180000490993:1782725-1782954 - GTCAGTTGGATACACGACTACCAGGACGCGTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------CCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------GA-ATTACGATAAGCCTCC--GAATA--------AT---------------------------------------------------------------------------CT-T-A-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG
droRho1 scf7180000757809:29528-29755 - GTCAGTTGGATCCACGACTACCAGGATGCCTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------CCTGGATTAGCCT--AGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCATAAG---------------------------AT-AACTC----------------------------------------------------------AAAACC-T-A-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG
droBia1 scf7180000302428:1154566-1154818 - GTTAGTTGGATCCACGACTACCAGGATGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCTT--GGGAAGA---GGACCATGGA---------------T---AACTCCATTTACC------------------------------G--ATTACCATAAGCCC----GAATA--------ACCCAGAAA-AACCA-------A--------------A-----ACAAAAA-----------------------AAAACC-T-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG
droTak1 scf7180000415862:164942-165172 + GTTAGTTGGATCCACGACTACCAGGACGCCTGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGA----------------------------------------------------------------------TTACCATTAGCCC----GAATA-CCAATT-AGCCAGAAT-AACTG-------A--------------------------------------------------CAAACT-T-A-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCGG
droEug1 scf7180000409524:543531-543773 - GTTAGTTGGATCCACGACTACCAGGATGCTTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------A---AACTCCAT-TACC------------------------------G--ATTACCATAAGCCT----GAATA--------ACCTAGAAT-AACTA----------------------------------------------------------AAAACT-A-A-----------------------------------------------------------------ACACTTAAACTATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCAATGGTGCCCG
dm3 chr3L:8098347-8098589 + GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAT-ACTTC----------------------------------------------------------ACAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG
droSim2 3l:7908138-7908380 + dsi_16937 GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAT-ACTTC----------------------------------------------------------ACAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG
droSec2 scaffold_0:385730-385972 + GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAT-ACTTC----------------------------------------------------------ACAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG
droYak3 3L:8685932-8686175 + GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCC--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAA-ACTTC----------------------------------------------------------AAAACT-AAA-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG
droEre2 scaffold_4784:3266331-3266573 - GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCC--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTATGCCT----GAATA--------ACCCAGAAC-AGTTC----------------------------------------------------------AAAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTCAGCTGGATACACGACTACCAGGATGCGTGCATCGATAAGCTCGAAAGGTATATTAA-CGGCGCATTTAG-------------------------------------GACTAAATGGATGATGA----CCAGATAGTGCT-TAAATCTC------------------------------------TAG--TT-------AATCA----AT-CAAT-------------------------------T-----------AATTCAATTAATTTA-----------------------AACAA--TTAT-CTA---------------------------ATGCG--CAAACTCAATCTCAATAC-----------------ATTCCCAACCTTAATTTCCCCCTCTTCCCGGTGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCAGCGATGGCGCCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............CACGACTACCAGGATGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003030000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCA.............1913.003012000000000000000000000000000000000000000000000000000000000000
......................AGGATGCGTGCATCGATAAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000010000000000000001000000000000000000000000000
..CAGCTGGATACACGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.002000000000000000000000000000000000000000000000000000000000000002
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCGATCGCATTGCAGCGAT........2312.002001001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGCGATGGCGCCTG1912.002001000000000000000000000000000000100000000000000000000000000000
...............GACTACCAGGATGCGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000001000100000000000000000000000000000000000000000
...........................................TCGAAAGGTATATTAA-CGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000000000000000000000000000000000000000000000000000000000000
..............CGACTACCAGGATGCGTGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000010000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGC...................1812.002000000000000001100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCAG............2512.002110000000000000000000000000000000000000000000000000000000000000
..............CGACTACCAGGATGCGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGCGGCGAAAAGAATATCG........................2311.001000000010000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCAGC...........2211.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTTCCCGGTGCGGCAG..................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCAGCGATGGCGCC..2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................TATTAA-CGGCGCATTTAG-------------------------------------GA........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................GCT-TAAATCTC------------------------------------TAG--TT-------AAT...........................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
....................CCAGGATGCGTGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
...............GACTACCAGGATGCGTGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
............CACGACTACCAGGATGCGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
............CACGACTACCAGGATGCGTGCATCGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................GCGTGCATCGATAAGCTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCAGCGA.........2311.001000000000000000000000010000000000000000000000000000000000000000
..........TACACGACTACCAGGATGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................TAG-------------------------------------GACTAAATGGATGATGA----CCAGATA..............................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCAGC...........2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................AG-------------------------------------GACTAAATGGATGATGA----.....................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
......................AGGATGCGTGCATCGATAAGCTCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
.................CTACCAGGATGCGTGCATCGATAAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.......................GGATGCGTGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGCAGCGATGGCGCCT.3411.001000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGCGAAAAGAATATCGATCG....................2311.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTGCAGCGATGGCGCCT.2111.001010000000000000000000000000000000000000000000000000000000000000
..............CGACTACCAGGATGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
.................CTACCAGGATGCGTGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
........GATACACGACTACCAGGATGCGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................TGCGTGCATCGATAAGCTCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
......................AGGATGCGTGCATCGATAAGCTCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.............................GTGCATCGATAAGCTCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGA..............................1811.001001000000000000000000000000000000000000000000000000000000000000
..................TACCAGGATGCGTGCATCGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
..........................TGCGTGCATCGATAAGCTCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCAGCGATGGC.....2711.001001000000000000000000000000000000000000000000000000000000000000
..............CGACTACCAGGATGCGTGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.........ATACACGACTACCAGGATGCGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
.................................ATCGATAAGCTCGAAAGGTATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.........ATACACGACTACCAGGATGCGTGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000010000000000000000000000000000000000000000000
........................GATGCGTGCATCGATAAGCTCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
................ACTACCAGGATGCGTGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATATCGATCGCATTGCAGCGAT........2811.001000000000000000000100000000000000000000000000000000000000000000
.................CTACCAGGATGCGTGCATCGATAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCATTGCAGCGATGGCGCC..2311.001000000000000000000000000100000000000000000000000000000000000000
...........ACACGACTACCAGGATGCGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCAGC...........1911.001000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCAGCG..........1911.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCAGCGAT........2211.001000100000000000000000000000000000000000000000000000000000000000
.........................ATGCGTGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCGCATTGCAGCGATGGCGCC..2511.001000000000000000000100000000000000000000000000000000000000000000
.............ACGACTACCAGGATGCGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGC..............2011.001000000000000000100000000000000000000000000000000000000000000000
.............ACGACTACCAGGATGCGTGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.......................................AAGCTCGAAAGGTATATTAA-CGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
...................ACCAGGATGCGTGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................GAAAGGTATATTAA-CGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
.............ACGACTACCAGGATGCGTGCATCGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
........................................................TAA-CGGCGCATTTAG-------------------------------------GACT......................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
..........................TGCGTGCATCGATAAGCTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..............CGACTACCAGGATGCGTGCATCGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGC..............2311.001000000000000000001000000000000000000000000000000000000000000000
..........TACACGACTACCAGGATGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................ATCGATAAGCTCGAAAGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGAATATC.........................2311.001000000000000000000000000000000000000000000000000000000000001000
.........ATACACGACTACCAGGATGCGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
....................CCAGGATGCGTGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
.........ATACACGACTACCAGGATGCGTGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
..........TACACGACTACCAGGATGCGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.............ACGACTACCAGGATGCGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.................CTACCAGGATGCGTGCATCGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
...............GACTACCAGGATGCGTGCATCGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCGATCGCATTGCAGCGATGGC.....2611.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTGCGCGGCGAAAAGA..............................2011.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
GTCAGCTGGATACACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTATAT-AACCGGCGCCATTCG-------------------------------------GACTAAAGGAATGCTGA----CCAAATAGTGCC-ACAAACCCCAT-TCCCCTCTCTCTCTCTCTTTACCTTTTTACCTAAG--TT-------AGTCA----GT-TAAT-------------------------------TTA--ATGAAAC-ATTCGATTAGTTTAAGTGCAATTAATTTATTCCGTTAAACT-C-G-AT-CCTTAAT---------------------------T--CAATATCAATCTCAATACATTACCAAACTT-----------AA---------------TTTTCCGTTGCGGCAGATTTTTGCGCGGCGAAAAGAATGTCGATCGCATTGCGGCGATGGCGCCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............GACTACCAGGACGCATGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003100002
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCGATCGCATTGCGGC...........2013.003100002
.........ATACACGACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.........ATACACGACTACCAGGACGCATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
........................GACGCATGCATCGATAAGCTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGTCGATCGCATTGC..............1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGCGGCGAAAAGAATGTCGATCGCA..................2811.001000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATGTCGATCGCATTGCGGC...........2311.001000001
.........ATACACGACTACCAGGACGCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATCGCATTGCGGCG..........1911.001100000
...............................................................................................................................................................................................................................................................................................TTATTCCGTTAAACT-C-G-AT-CCTTAAT---------------------------T--C...........................................................................................................................2811.001100000
.......................GGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
................ACTACCAGGACGCATGCATCGATAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100
GTCAGCTGGATACACGACTACCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................CAGGACGCATGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAAGAATGTCGATCGCATT................2211.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGTCGATCGCATTGCGGCGATG.......2611.001100000
...........................................................................................................................................................................................................................................................................................................................AT---------------------------T--CAATATCAATCTCAATACATTACCA...................................................................................................2811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGCGGCGAAAAGAAT............................1911.001000001
.................................ATCGATAAGCTCGAAAGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........GATACACGACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATGTCGATCGCAT.................1811.001001000
..............CGACTACCAGGACGCATGCATCGATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCATTGCGGCG..........2011.001100000
................ACTACCAGGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.............ACGACTACCAGGACGCATGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......TGGATACACGACTACCAGGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........ATACACGACTACCAGGACGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCGAAAAGAATGTCGATCG....................2211.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGAAAAGAATGTCGATCGC...................2211.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCATTGCGGCGATGGCG....2611.001100000
...............GACTACCAGGACGCATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..CAGCTGGATACACGACTACCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCATTGCGGCGA.........2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCGATCGCATTGCGGCGATGG......2511.001100000
.........ATACACGACTACCAGGACGCATGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATGTCGATCGCATTGCGGCGATG.......2711.001000001
.............................................................................................................................................................................TTACCTTTTTACCTAAG--TT-------..............................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGA..............................1811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAAGAATGTCGATCG....................1911.001000001
......TGGATACACGACTACCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......GGATACACGACTACCAGGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............GACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGCATTGCGGCGATGG......2011.001100000
...........................GCATGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATCGCATTGCGGCGAT........2111.001000001
GTCAGCTGGATACACGACTACCAGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
GTCAGCTGGATACACGATTATCAGGATGCGTGCATCGATAAGCTCGAAAGGTATAT-AACCGGCACATTTAG-------------------------------------GACTAAATGGATGACGA----CCAAAT-------------------AATC------------------------------G--AT-------------------CGAT-------------------------------T-----------A-----ATTAATCTA-----------------------AACTA--T-AT-CTATATCTATAT-ATTTATACATATACATTATGCGTACATATTTA----------------ATTTTAAAACAATTCCCACCCTTAATTCTTACCCTCTTCTGATGCGGCAGATTTTTGCGAGGCGAAAAGAATGTCGATCGCATCGCGGCGATGGCGCCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAAGAATGTCGATCG....................2011.00101
...............GATTATCAGGATGCGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
droWil2
GTCAGTTGGATACATGACTATCAGGATGCATGCATCGATAAGCTCGAAAGGTATATTAAGTGGCGCAACTAG------------------------GATT---TA--AAGACTA---GGAA---------CC--------------AC------------------------------------------------------GCAC----AAGCA-CAAG----------AT-GGCTAAAAATCGAAAA-----------A-----ATAAAACCA-----------------------AACC-A-A-ATATTAAATCTCTATTATATATATGTATATGTA--------------------------------------------ACC--T---------------ATATATTATGCGACAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCGATCGCATTGCGGCC..........2114.00440000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGC...........2214.00440000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCGGC...........2613.00321000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGC...........2312.00220000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCGGC...........2112.00201010
...........ACATGACTATCAGGATGCATGCATCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00201100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGCC..........2312.00220000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGCGGCCAT........2712.00201100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCGGC...........1912.00220000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCGGCC..........1912.00220000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCGGCCATGG......2311.00110000
...........................GCATGCATCGATAAGCTCGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGCCATGGTG....2911.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATATCGATCGCATTGCGGCCA.........2711.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCAT.................2011.00100100
..................................................................................................TT---TA--AAGACTA---GGAA---------CC--------------AC------------------------------------------------------GCAC----AA...................................................................................................................................................................................................................................................................2511.00101000
.............ATGACTATCAGGATGCATGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...........ACATGACTATCAGGATGCATGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCGGCCAT........2211.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGC..............1811.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCGATCGCATTGCGGC...........2011.00110000
..........TACATGACTATCAGGATGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
...........ACATGACTATCAGGATGCATGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCGGCC..........2011.00110000
................................................................................................................................................................................................................................................................................................................................................................................................ACC--T---------------ATATATTATGCGACAG..................................................2011.00110000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGCGGCGAAAAGAATATC.........................2111.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCGGCCATGGTGCCC.2811.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAAGAATATCGATC.....................1911.00100100
......................................................................AG------------------------GATT---TA--AAGACTA---GGAA---------C....................................................................................................................................................................................................................................................................................................................................................2011.00101000
.............ATGACTATCAGGATGCATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGATTTTTGCGCGGC.....................................1811.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTTGCGCGGCGAAAA................................1911.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGCCAT........2611.00100100
...........................GCATGCATCGATAAGCTCGAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGC..............2111.00100010
......................................................................AG------------------------GATT---TA--AAGACTA---GGAA---------CC--------------.....................................................................................................................................................................................................................................................................................................................................2111.00110000
..........................TGCATGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
GTCAGTTGGATACATGACTATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.............ATGACTATCAGGATGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
....GTTGGATACATGACTATCAGGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
dp5
GTCAGCTGGATCCATGACTACCAGGATGCATGCATCGACAAGCTCGAAAGGTATATTAAGCGACGCATTTAGAGACGCGCATGGGAAGCAATTTGGGATCTGGCT--GGGATC-----------------------------T---ACCTCAAT-TCCT------------------------------CA-ATCTTGC--AATTTCTGTGT-CAAT-----T--------------------------TTTC----------------------------------------------------G-----------------------------------------------------------------AAACTCAAATAATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGC...........2311.0010100000000
....................CCAGGATGCATGCATCGACAAGCTCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGC..............2111.0010100000000
.......................................................................................GCAATTTGGGATCTGGCT--GGGATC-----------------------------.........................................................................................................................................................................................................................................................................................................................................2411.0010001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGCGGCGAAAAGAAT............................1811.0010100000000
................ACTACCAGGATGCATGCATCGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.0020110000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGCGGCCATGGTGC...1811.0010100000000
...............GACTACCAGGATGCATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000200000
..............................................................................................................ATC-----------------------------T---ACCTCAAT-TCCT------------------------------CA-ATCTT..................................................................................................................................................................................................................................................................................2311.0010100000000
...............................................................CGCATTTAGAGACGCGCATGGGA.................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCGGCCATGGTG....2511.0010100000000
.................CTACCAGGATGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
...............GACTACCAGGATGCATGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
...............GACTACCAGGATGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010000000
...................ACCAGGATGCATGCATCGACAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010001000000
............CATGACTACCAGGATGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010010000000
..............TGACTACCAGGATGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010100000000
............CATGACTACCAGGATGCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
droPer2
GTCAGCTGGATCCATGACTACCAGGATGCATGCATCGACAAGCTCGAAAGGTATATTAAGCGACGCATTTAGAGACGCGCATGGGAAGCAATTTGGGATCTGGCT--GGGATC-----------------------------T---ACCTCAAT-TCCT------------------------------CA-ATCTTGC--AATTTCTGTGT-CAAT-----T--------------------------TTTC----------------------------------------------------G-----------------------------------------------------------------AAACTCAAATAATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATATCGATCGCATTGC..............2214.004400000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGC...........2313.003300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCGGC...........1913.003300000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGCC..........2413.003300000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATCGCATTGCGGCC..........1812.002200000
..CAGCTGGATCCATGACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCGGCC..........2012.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGC..............2011.001001000
..................TACCAGGATGCATGCATCGACAAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCGGCCATGGTGCC..2711.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATCGCATTGCGGCCATG.......2111.001010000
droAna3
GTTAGCTGGATCCACGACTACCAGGACGCGTGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAG--------------------CCTGGATTAGCCTTGGGGACTA---GGACGATGGA---------------T---AACTCCAT-TCCC------------------------------G--AT-------AGCCT----GT-TAGC---------TTG-----------------------------------------------------T---TCCAATCTC-ATAAC----------------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGAGGCGAAAAGAATATCGATCGCATTGCGGCAATGGTGCCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGC...........2312.002000011
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGC..............2112.002000002
......................AGGACGCGTGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000011
...............GACTACCAGGACGCGTGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATATCGATCGCATTGCGGCA..........2611.001000010
...................ACCAGGACGCGTGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................AAGCTCGAAAGGTATATTAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...................ACCAGGACGCGTGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
............................................................................................................................GGA---------------T---AACTCCAT-TCCC------------------------------G--AT-------AGCCC----.....................................................................................................................................................................................................................................................................2411.001010000
..........TCCACGACTACCAGGACGCGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCGGC...........2611.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGCAAT........2511.001000001
........GATCCACGACTACCAGGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....GCTGGATCCACGACTACCAGGACGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.............................................................GACGCATTTAG--------------------CCTGGATTAGCCTTGG...........................................................................................................................................................................................................................................................................................................................................................................2711.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGCAATGGT.....2811.001010000
............CACGACTACCAGGACGCGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................CTACCAGGACGCGTGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........CCACGACTACCAGGACGCGTGCATCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................ATCGATAAGCTCGAAAGGTATATTAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
...............GACTACCAGGACGCGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCGGCAATGG......2611.001100000
.............ACGACTACCAGGACGCGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCGAAAAGAATATCGATCGC...................2411.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCGGCAATG.......2311.001100000
droBip1
GTTAGCTGGATCCACGACTACCAGGACGCGTGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAG--------------------CCTGGATTAGCCT--GGGACTA---GGACGATGGACGA------------T---AACTCCAT-TCCC------------------------------G--AT-------AGCCT----GT-TAAC-----T--------------------------TTTC-----------------------------T---TCAAATGTC-ATAAC----------------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGAGGCGAAAAGAATATCGATCGCATTGCGGCAATGGTGCCCGSizeHit CountTotal NormTotal
No Reads
droKik1
GTTAGTTGGATCCACGACTACCAGGACGCCTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------CCTGGATTAGCCT--GGGACTA---GGATGGTGT---------------------ACTCCAT-TACC------------------------------G--AT-------AGCCT----GA-TA--------AC-CAG-----------------------------------------------------TTAATCAACTCCA-AAAACT-T-G-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCCATGGTGCCCGSizeHit CountTotal NormTotal
No Reads
droFic1
GTCAATTGGATCCACGACTACCAGGATGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGACT--GGGACTA---GGACGATGGT---------------TT--AGCTCCAT-TACC------------------------------CCGATTAC-----------------------------CAGAATCACTTC----------------------------------------------------------A-AACT-A-------------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCGGSizeHit CountTotal NormTotal
No Reads
droEle1
GTCAGTTGGATACACGACTACCAGGACGCGTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------CCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------GA-ATTACGATAAGCCTCC--GAATA--------AT---------------------------------------------------------------------------CT-T-A-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotal
No Reads
droRho1
GTCAGTTGGATCCACGACTACCAGGATGCCTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------CCTGGATTAGCCT--AGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCATAAG---------------------------AT-AACTC----------------------------------------------------------AAAACC-T-A-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotal
No Reads
droBia1
GTTAGTTGGATCCACGACTACCAGGATGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCTT--GGGAAGA---GGACCATGGA---------------T---AACTCCATTTACC------------------------------G--ATTACCATAAGCCC----GAATA--------ACCCAGAAA-AACCA-------A--------------A-----ACAAAAA-----------------------AAAACC-T-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotal
No Reads
droTak1
GTTAGTTGGATCCACGACTACCAGGACGCCTGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGA----------------------------------------------------------------------TTACCATTAGCCC----GAATA-CCAATT-AGCCAGAAT-AACTG-------A--------------------------------------------------CAAACT-T-A-----------------------------------------------------------------AAACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCGGSizeHit CountTotal NormTotal
No Reads
droEug1
GTTAGTTGGATCCACGACTACCAGGATGCTTGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------A---AACTCCAT-TACC------------------------------G--ATTACCATAAGCCT----GAATA--------ACCTAGAAT-AACTA----------------------------------------------------------AAAACT-A-A-----------------------------------------------------------------ACACTTAAACTATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCAATGGTGCCCGSizeHit CountTotal NormTotal
No Reads
dm3
GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAT-ACTTC----------------------------------------------------------ACAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.............................ATGCATCGATAAGCTCGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AACGATTCCCAT---------------TCTTCTGATGCGGCA...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GGGACTA---GGACGATGGA---------------T---AACTCATC-............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAAGAATATCGATCGCA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................GGACGCATGCATCGATAAGCTCGAAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGAATAT..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GATCCACGACTACCAGGACGCATGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................T--GGGACTA---GGACGATGGA---------------T---AAC..................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TCCCAT---------------TCTTCTGATGCGGCAGATTTTT............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCGAAAGGTACATTAAGCGACGCATTTAGA-------------------...........................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CTGGATTAGCCT--GGGACTA---GGAC..............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TACCAGGACGCATGCATCGATAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACCAGGACGCATGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGAAAAGAATATCGATCGCATTG...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACCAGGACGCATGCATCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGATTTTTGCGCGGCGAAAAG...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATTTTTGCGCGGCGAAAAGAAT............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TACCAGGACGCATGCATCGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCGGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAT-ACTTC----------------------------------------------------------ACAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................A---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCC..........................................................................................................................................................................................................................................................................2813.00300300000000000000
...............................................................CGCATTTAGA-------------------TCTGGATTAGC................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGATCGCATTGCGGC...........1912.00200200000000000000
................................................................GCATTTAGA-------------------TCTGGATTAGCC...............................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCGGC...........2111.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCGGCG..........1911.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGC...........2211.00101000000000000000
........................................................................................................T--GGGACTA---GGACGATGGA---------------T---AACTCCA..............................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.......................................................TTAAGCGACGCATTTAGA-------------------TCTGGATTAGCC...............................................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCGGC...........2611.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGCG..........2311.00101000000000000000
....ATTGGATCCACGACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCAT.................1811.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCGAAAAGAATATCGATCGC...................2311.00100100000000000000
....................CCAGGACGCATGCATCGATAAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..............CGACTACCAGGACGCATGCATCGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.................CTACCAGGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAAGAATATCGATCGCATTGCGGC...........2911.00101000000000000000
...............................................................CGCATTTAGA-------------------TCTGGATT...................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..TAATTGGATCCACGACTACCAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.................CTACCAGGACGCATGCATCGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCGCATTGCGGCGATGGTGC...2611.00100000000001000000
GTTAATTGGATCCACGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...............GACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...AATTGGATCCACGACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.................CTACCAGGACGCATGCATCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
droSec2
GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTATATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCT--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAT-ACTTC----------------------------------------------------------ACAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTTGCGCGGCGAAA.................................1812.0020020
.......................GGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGC..............1912.0020110
...............GACTACCAGGACGCATGCATCGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
...................ACCAGGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...................ACCAGGACGCATGCATCGATAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGCGGC...........2411.0010100
.....................CAGGACGCATGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
....................................................................................................AGCCT--GGGACTA---GGACGATGG.........................................................................................................................................................................................................................................................................................................................................................2111.0010010
............CACGACTACCAGGACGCATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
............................................................CGACGCATTTAGA-------------------TCTGG......................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.................................................................................................................A---GGACGATGGA---------------T---AACTCCA..............................................................................................................................................................................................................................................................................................................................1911.0010010
......................AGGACGCATGCATCGATAAGCTCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
................................................................................................GATTAGCCT--GGGACTA---GGACGAT...........................................................................................................................................................................................................................................................................................................................................................2311.0010100
.........ATCCACGACTACCAGGACGCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
......................AGGACGCATGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
...................ACCAGGACGCATGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCG.............2111.0010100
....ATTGGATCCACGACTACCAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...............GACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
GTTAATTGGATCCACGACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
droYak3
GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCC--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTAAGCCT----GAATA--------ACCCAGAAA-ACTTC----------------------------------------------------------AAAACT-AAA-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............GACTACCAGGACGCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1719.00900000000009
....ATTGGATCCACGACTACCAGGACGCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000000003
GTTAATTGGATCCACGACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTGCGGC...........2412.00200100010000
......................AGGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...................ACCAGGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................GGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........ATCCACGACTACCAGGACGCATGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...................ACCAGGACGCATGCATCGATAAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000
....ATTGGATCCACGACTACCAGGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.......................GGACGCATGCATCGATAAGCTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCGATCGCATTGCGGCGAT........2311.00100000010000
.....................................ATAAGCTCGAAAGGTACATTA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCGGCGAAAAGAATATCGATCGCA..................2711.00101000000000
...........CCACGACTACCAGGACGCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................AAACGATTCCCAT---------------TCTTCTGATGCGGC....................................................2711.00101000000000
......................AGGACGCATGCATCGATAAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................GGACGCATGCATCGATAAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATCGATCGCATTGCGGCG..........2311.00101000000000
..................................................GTACATTAAGCGACGCATT..................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.....................................ATAAGCTCGAAAGGTACATTAAGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATATCGATCGCATTG...............2011.00100000010000
.....................CAGGACGCATGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.......................GGACGCATGCATCGATAAGCTCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................AACGATTCCCAT---------------TCTTCTGATGCGGC....................................................2611.00100100000000
..............CGACTACCAGGACGCATGCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGC...........2311.00100000010000
...............GACTACCAGGACGCATGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCATTGCGGCGATGG......1911.00101000000000
...........................................................GCGACGCATTTAGA-------------------TCTGGATTAGCC...............................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........GATCCACGACTACCAGGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGCGGCGAAAAGAAT............................1911.00100000010000
droEre2
GTTAATTGGATCCACGACTACCAGGACGCATGCATCGATAAGCTCGAAAGGTACATTAAGCGACGCATTTAGA-------------------TCTGGATTAGCCC--GGGACTA---GGACGATGGA---------------T---AACTCCAT-TACC------------------------------G--ATTACCTTATGCCT----GAATA--------ACCCAGAAC-AGTTC----------------------------------------------------------AAAACT-A-A-----------------------------------------------------------------ACACTTAAACGATTCCCAT---------------TCTTCTGATGCGGCAGATTTTTGCGCGGCGAAAAGAATATCGATCGCATTGCGGCGATGGTGCCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................CTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020100010
..............CGACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0022000000
........GATCCACGACTACCAGGACGCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAAGAATATCGATCGC...................2111.0010100000
.................................................................................................ATTAGCCC--GGGACTA---GGACGATGG.........................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.........ATCCACGACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................TAAACGATTCCCAT---------------TCTTCTGATGCGGC....................................................2811.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGCGGC...........2611.0010000100
.............ACGACTACCAGGACGCATGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
......................AGGACGCATGCATCGATAAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGCGGCAGATTTTTGCGCGG......................................2411.0011000000
...............GACTACCAGGACGCATGCATCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...............GACTACCAGGACGCATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.............................................................GACGCATTTAGA-------------------TCTGGATT...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
......TGGATCCACGACTACCAGGACGCATGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATCGATCGCATTGCGGC...........2311.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGA..............................1811.0011000000
.......GGATCCACGACTACCAGGACGCATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
......................................................................................................................................................................................................TTATGCCT----GAATA--------ACCCAGA.................................................................................................................................................................................................................................................2011.0011000000
...............GACTACCAGGACGCATGCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCGATCGCATTGCGGC...........2111.0010010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCGCGGCGAAAAGAATATC.........................2311.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATATCGATCGCATTGC..............2311.0010000100

Generated: 05/16/2015 at 08:38 PM