ID:

dvi_19442

 Coordinate:

scaffold_13049:10970662-10970812 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.7 -16.4

Flybase annnotation

CDS [Dvir\GJ13379-cds]; exon [dvir_GLEANR_13274:4]; intron [Dvir\GJ13379-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATAGACGGACAGATGGACATGGCTATATCACGTCGGCTGTTGAATCTGATTTAGAATATACATACTTTATGGAGTCGGAGATGCCTCCTTCTATGTCTGTTCACCGTGTCCGGCATCTATATGGATCCGAGTTCTTTGAGAGTCCCAAATGCTCATCTCTTAGTTATCTAATCTTTATCGCTACACCTCTTGCCGCACAGATAATTTACTGTATTCGGGAACTTGATCTCAGCATTTCGAGTGCGACCGC
***************************************************************************************....................(((.(((((...(((.((((..((...((..((((..............))))..))...))..)))).)))............))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060683
160_testes_total
 M028
head
 SRR060681
Argx9_testes_total
 M047
female body
 M061
embryo
 SRR060659
Argentina_testes_total
 SRR060677
Argx9_ovaries_total
 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060670
9_testes_total
 GSM1528803
follicle cells		 V047
embryo
 SRR1106729
mixed whole adult body
 SRR060655
9x160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060686
Argx9_0-2h_embryos_total
.......................................................................................CCTTCTATGTCTGTTCACCGTGT............................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CATCAAGTCTGCTGTTGAATCT........................................................................................................................................................................................................... 22 3 2 1.50 3 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCGGGAACTTGATCTCAGCATTTCGAG......... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ACTTGATCTCAGCATTTCGAGC........ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCTATGTCTGTTCACCGTGT............................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GACATGGCTATATCACGTCGGCTG................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................ACTTCTATGTCTGTTCACCGTGT............................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TTATCGCTACACCTCTTGCCGCACAG.................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGTATTCGGGAACTTGATCTCA................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CAGTGTTTCGAGTGCGAGCGC 21 3 4 0.75 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTCGGCAACTTGATTCCAGCAT............... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGATAATGTACTGTATGCG................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATCGGGAACTTGATCTCGGT................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................GTATGTTCATCGTGTCGGGC........................................................................................................................................ 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........GACAGATGGACATGGCTATATC............................................................................................................................................................................................................................. 22 0 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........CAGATGGACATGGCTATATC............................................................................................................................................................................................................................. 20 0 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........GACAGATGGACATGGCTATA............................................................................................................................................................................................................................... 20 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........TACAGATGGACATGGCTATATC............................................................................................................................................................................................................................. 22 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................ATACTTTATGGAGTCGGAGATG....................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................TACTTTATGGAGTCGGAGATG....................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTAATAGGGAACTTGATC...................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TAATAGGGAACGTGATCT..................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................................TAATCGGGAACGTGAGCT..................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........GAGAGATGGACATGGCTAT................................................................................................................................................................................................................................ 19 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................ATCTCTTGGTTCTCTCATC............................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................TACTTTATGGAGTCGGAGATGC...................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATATCTGCCTGTCTACCTGTACCGATATAGTGCAGCCGACAACTTAGACTAAATCTTATATGTATGAAATACCTCAGCCTCTACGGAGGAAGATACAGACAAGTGGCACAGGCCGTAGATATACCTAGGCTCAAGAAACTCTCAGGGTTTACGAGTAGAGAATCAATAGATTAGAAATAGCGATGTGGAGAACGGCGTGTCTATTAAATGACATAAGCCCTTGAACTAGAGTCGTAAAGCTCACGCTGGCG
**************************************************....................(((.(((((...(((.((((..((...((..((((..............))))..))...))..)))).)))............))))).))).*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060663
160_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 M061
embryo
 M047
female body
 V047
embryo
 M028
head
 V053
head
 SRR060669
160x9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060657
140_testes_total
 SRR060658
140_ovaries_total
 SRR060689
160x9_testes_total
 SRR060664
9_males_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060673
9_ovaries_total
 SRR1106729
mixed whole adult body
 SRR060660
Argentina_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060655
9x160_testes_total
 SRR060670
9_testes_total
 SRR1106712
embryo_0-2h
 SRR1106717
embryo_6-8h
 SRR1106718
embryo_6-8h
 SRR1106722
embryo_10-12h
 SRR1106730
embryo_16-30h
 GSM1528803
follicle cells		 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR1106714
embryo_2-4h
......................................................................................TGGGAGATACAGAGAAGTG.................................................................................................................................................. 19 3 20 122.25 2445 903 552 220 182 84 17 45 37 72 29 24 59 6 34 17 8 18 25 23 14 13 0 12 14 1 7 0 10 8 1 3 0 0 2 0 2 0 0 0 0 0 0 0 0 1 1 1
.....................................................................................GTGGGAGATACAGAGAAGTG.................................................................................................................................................. 20 3 13 36.38 473 15 169 65 57 6 66 2 11 13 9 5 6 1 7 0 17 1 2 1 4 0 0 4 0 0 0 2 0 1 0 0 1 1 1 1 0 0 0 1 1 1 1 1 0 0 0 0
.......................................................................................GGGAGATACAGAGAAGTG.................................................................................................................................................. 18 2 14 21.29 298 50 61 29 19 13 3 12 11 14 2 10 14 2 12 4 2 7 3 5 7 3 0 3 1 0 1 5 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATAGATTAGGACAAGCGATG.................................................................. 20 3 5 15.00 75 12 10 6 4 10 4 12 0 1 0 10 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TAGATTAGGACAAGCGATG.................................................................. 19 3 12 9.25 111 17 6 7 3 18 4 30 2 4 0 10 0 0 0 0 0 0 0 0 0 0 1 0 2 2 0 2 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGAATCAATCGATTAGAA........................................................................... 18 1 1 3.00 3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GGTGGGAGATACAGAGAAGTG.................................................................................................................................................. 21 3 5 1.40 7 0 2 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................GGAGATACAGAGAAGTGTCAC.............................................................................................................................................. 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................CGGTGGGAGATACAGAGAAGTG.................................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................GAAGATACACACAAGTGTCACA............................................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGAGAAGTGTCACA............................................................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TAGATTAGGACAAGCGATGTG................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGGAGATACAGAGAAGTGTCAC.............................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGAGAAGTGTCACAG............................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGGAGATACAGAGAAGTGTCACAG............................................................................................................................................ 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGAATCAATCGATTAGAAAAA........................................................................ 21 2 5 0.80 4 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGAAAAGTGTTACAG............................................................................................................................................ 21 3 8 0.75 6 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATACAGAGAAGTGTCACAGT........................................................................................................................................... 20 3 4 0.75 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GGGGAGATACAGAGAAGTG.................................................................................................................................................. 19 3 20 0.65 13 1 6 0 2 0 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TGAGGGAGATACAGAGAAGTG.................................................................................................................................................. 21 3 5 0.60 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGAGAAGTGGTAC.............................................................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GTGGAAGATACAGAGAAGTG.................................................................................................................................................. 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGAGAAGTGTTACAGG........................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGAAGATACAGAGAAGTGTTAC.............................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GATACAGAGAAGTGTTACAGG........................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATACAGAGAAGTGTCACAG............................................................................................................................................ 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGGAGATACAGAGAAGTGGTA............................................................................................................................................... 21 3 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGACAAGTGTTACA............................................................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TGGGAGATACAGACAAGTG.................................................................................................................................................. 19 2 7 0.43 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AGGGAGATACAGAGAAGTG.................................................................................................................................................. 19 2 5 0.40 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TGGTAGATACAGAGAAGTG.................................................................................................................................................. 19 3 12 0.33 4 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TGGAAGATACAGAGAAGTG.................................................................................................................................................. 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TGTGGGAGATACAGACAAGTG.................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTGCCTGTCTACCTGTACCGAT................................................................................................................................................................................................................................. 22 0 11 0.27 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGCAGATACAGAGAAGTG.................................................................................................................................................. 18 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CAGGCCGTCGGTATACCAAG........................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GAATCAATCGATTAGAAA.......................................................................... 18 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GGGGGAGATACAGAGAAGTG.................................................................................................................................................. 20 3 15 0.20 3 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGGAGATACAGAAAAGTG.................................................................................................................................................. 18 2 12 0.17 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TACAGAGAAGTGGCACGGT........................................................................................................................................... 19 3 12 0.17 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GTGGAAGATACAGAGAAG.................................................................................................................................................... 18 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GGTGGGAGATACAGAGAAGT................................................................................................................................................... 20 3 15 0.13 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAGATACAGAGAAGTGTCAC.............................................................................................................................................. 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGAGAAGTGGTA............................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TGGCAGATACAGAGAAGTG.................................................................................................................................................. 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TGGGAGATACAGATAAGTG.................................................................................................................................................. 19 3 19 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CTCTACCTCAACGGAGGAAG............................................................................................................................................................... 20 3 20 0.10 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TGTGGAAGATACAGAGAAG.................................................................................................................................................... 19 3 20 0.10 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TAGATTAGCACAAGCGATG.................................................................. 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTCTGCCTGTCTACCTGTACCGAT................................................................................................................................................................................................................................. 24 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TGGAAGATACAGAGAAGTGT................................................................................................................................................. 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TGCCTGTCTACCTGTACCGAT................................................................................................................................................................................................................................. 21 0 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAATGGCGATTTGGTGAACG......................................................... 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGAATCAATCGAGTAGAA........................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGATACAGAGAAGTGCTAC.............................................................................................................................................. 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGGAGATACAGAGAAGTGTC................................................................................................................................................ 20 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CCTGTCTACCTGTACCGAT................................................................................................................................................................................................................................. 19 0 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAATAGTGATTTGGTGAACG......................................................... 20 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGGCGATACAGAGAAGTG.................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATACAGAGAAGTGCTACAG............................................................................................................................................ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGAGGATACAGAAAAGTGT................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:10970612-10970862 + dvi_19442 TATAGACGGACAGATGG----------------ACA-TGGCTATATCACGTCGGCTGTTGAAT--CTGATTTAGAATATACATACTTTATGGAGTCGGAGATGCCTCCTTCTATGTCT---------------------------------------------GTTC---------------------------------------------------------ACCGTGTCCGGCATCTATATGGATCCGAGTTC-----------------------------------------------------------------------------------------------------------------------------------------------TTTGAGAGTCCCAAATGCTCATCTCTTAG-----------TTATCTAAT------CTTTATCGCTACACCTCTTGCCGCACAGATAATT---------------------TACTGTATTCGGGAACTTGATCTCAGCATTTCGAGTGCGACCGC
droMoj3 scaffold_6496:26042028-26042225 - GACGGACGGACAGACGG----------------ACA-GGGCTATATCGACTCAGCTCGTCGTG--CTGATCAAGAATATATATACTTTGTGGGGTCTGCCACGCCTCCTTCTGCCTGT-------------------TAC------------------ATAAATTT----------------------------------------------------------AACAAAACCATTATACCCTGAT---CT----GGGTT------------CAGGGT--TAACT--ATTGG-ATATTAGAAGCTATA---------------------------------------C---------CTCTTA-----TAGTACATT--TA--------------------------------------------------------------------------------------------------------TTT---------------------CGC---------------------------------TACA----
droGri2 scaffold_14853:3743228-3743425 + GA-------------------------------ACA-TGGCTATATCAACTCGGGTGGCTATG--CTGATCAAGATTATATATACTATGTCGGGTCGGAGATATCTCCTTCAATGCGT-------------------TAC------------------AAGAA-----------------------------CATATT-TGACATCCCAGCTCA--------TTCA-------------------------------------------------------------------------------------------------------T------ATACT--------TATCTTTC---------TCCAATATAGGTT----CTGTCGACCAATCACACCTTGGCTCAATT---------------GACAACTTGGTGTTTGTGTGA-------------------------------------------------------------------------------------------------GTTT----
droWil2 scf2_1100000004456:3253-3474 + GACGGACGGACGGACGG----------------ACA-TGGCGATTTGAACTCGTCTCGTCGTG--CTGATCAAGAATATATATACTTTATATGGTCGGAGATGCTTCCTTCTATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCAAAATTAATATACCCTTTTT------GC-----------------AAGGGT-ATAAAAATT------------------TA----TCGCTGCTTT-GT----TTT------CTC--------TATCTTTT---------TCTTGCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGATTTGAG------------------
dp5 2:9962344-9962499 + GAAGGACAGACAGACAG----------------ACA-TGGCTCAATCGACTCGGCTGTTGATG--CTGATCAAGAATATATATACTTTATGGTGTCGGAAACGCCTCCTTTTTGACCTTACACACATCCA--------------------------------TTTTC-------------------------------------------------------ACCACAAATCTTATATACCCCAATACTCATTTTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATC----
droPer2 scaffold_3:727693-727927 - GACAGACGGACAGACAG----------------ACA-GGGCTCAATCGACTCGGCTATTGATG--CTGATCAAGAATATATATACTTAATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCA--------------------------------TTTTC-------------------------------------------------------ACCACAAATCTAATATACCCCAATACTCATTTTGAGTA------------ATCAGTTAACA--------------------------------AAGTTTTTCTTAACT------ATTTTTGAAGTTTACCT---------------------------ACTGTTTTGATCAG----------------------------------------------------------------------------------------------------------------------------------CCTGACCTTAGCT-TTGAAGTACAA----
droAna3 scaffold_13228:850021-850185 + GA--------CAGACGG----------------ACA-TGCTTATATCGACTCAGGAGGTGATC--CTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTTCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCAAAATTATAATACCTTCTT--------C-----------------AAGGGT-ATAAAAATG--------------------------------------------------------------------------------------------------------------------------------------------ACATCTAACAGTTACCATAT-------------------------------------------------------------------------------------------------CTTT----
droBip1 scf7180000396431:1217157-1217385 - GACAGACGGACAGACGGACAGACGGACAGACGGACA-TGCTCATATCAACTCAGGAGGTGATC--CTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------GACAAAATTATAATACCCTCT--------GC-----------------AAGGGT-ATAAAAATAA--GCT---------AG-------------CTTTTCT----T------ATTTTTAACGTTGACCTTT-------------TACCACAAA--TATTG------------------------------------------------------------------------------------------------------TT---------------------TAT--------------TAATTTTA-----------GAAA----
droKik1 scf7180000302385:1057769-1057971 - G---------------G----------------ACA-TGGCTAAAACGATTCGGCTGTTGATG--CTGATCAAGAATATATATGATTTATGGGGTCGGAAAGGACTCCTTCACTGCCT-------------------GGC------------------AAACTTCCGACTGATAATATATAGCCTCCAAGGATATAAT-AAAAATCCGCACACAAATGCTTCT--GG----------------------------------------------------------------GCT---------TG-------------TT---CT----TTT------------------------------------------------------------------------------------------------------------------CT------CTTTATTGATACACTTATAGCATAGCATAT--------------------------AG---------------------------------TATA----
droFic1 scf7180000448940:17200-17364 - GACAGACGGACAGACGTATG---TT--------ACA-GACGTATTCCGACTCTGCTCGTGATG--CTGATCAAGAATATATATAATTTATGGGGTCTGAGGTGTCCCCTTCACTGCGT-------------------TGC------------------AAACATCTG---------------------------------------------------------CCTGAATTTATATTATCCTC-TGCTCT--GC-----------------AAGGGT-ATAAAAACAC----------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------ATCT----
droEle1 scf7180000491121:57620-57803 - TTTGGACAGAGAGACGG----------------AAA-TGGGTAGATCGACTTGGCTATTGATC--CTGATCAATAATATATATACTTTATAGGGTTGGAAACGCTTCCTTCTAC--------------------------------------------------------------------------------------------------------------------------------------TCT--ACGATTA------------ACGGGT-ATTACAAGT-----------------ATAATAATTCCCAAATT-AT----TTTCTCTATTCTTGACTTC---------CTCTTC-----TCGCACAGG--TA---------------------------------------------------------------------------------------------------------TT---------------------TCC---------------------------------TGTA----
droRho1 scf7180000779812:14263-14478 - GA------------CGG----------------ACA-TGACTAGATTGACTCTCCTGGTGATG--CTGATCAAGAATATATATACTTTATAGGGTCGGAAATGTCTCCTTCACTGCGT-------------------TGC------------------AAACCTTTT---------------------------------------------------------TATGAAATTAAAATACCCTCT--------GC-----------------AAGGGT-ACAAAAATACGGGCA---------TGTTA----ATGATGTTTT-TT----TCG--------------GTGTACATTTCCGCCGCACTTCCTG-------CTA----------------------------------------------CACGGTGCACTGTGTGT------------------------------------------------------------------AG--------------GA-----------------ATTT----
droBia1 scf7180000302422:1240571-1240809 - -----ACGGACAGACGG----------------ACAATGGCTAG----------------ATC--CTGATCAAGAATATATATACTTTATGGGGTCGGAAGCGCTTCCTTCTAAATAT-------GTTTGT------TT-TTGTTTCGGTGTTTATACATAAATGC------------------------------------------------------------------------------------AAGTGT----TATGTAGTGTTG---------------------------------ATGATCAACCCAAAGTT-AT----GATATCAA-----------------------------------------------------------------------------------------------------------------------------------CTCTTGTGACGGAAATGATTTATCTCATAAATGAATACCCTTCCTAAATTTTTTAATTTAGTTGCAGCGTGCCGAATGTGA----
droTak1 scf7180000412864:10290-10466 + GACAGACGGACAGACGG----------------ACA-TGGCTAGATCGACTCGGCTAGTGCCC--CTGATCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTACCTGT-------------------TAC------------------ATACTTTTG---------------------------------------------------------CACGAATCTAATATACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAAAAATCT----------------------------------------------------------------------------------------------------------------------------------------T----AG-------CGGTCAAAT-------------------------------------------------------------------------------------------------TTTT----
droEug1 scf7180000409684:24990-25212 - GACGGACGGACAGACGG----------------ACA-TGGCTCAATCGACTTCGCTATTGATC--CTGATCAAAAATATATATACTTTATAGGGTCGCAAAAGCTTCCTTCTATCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTAGTATACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAAATATG-----------------------------------------T------ATGTT--------TGTATTTA---------TCC-ATGTCATTT----TTTCTGCTCGG---------------------------------------------------------------------TAGAGCTCTTGCTTTAAAGATA------------------------------------------------------------CTTT----
dm3 chr4:1211345-1211521 - GGCAGACAGACGGACGG----------------GCA-GGGCCAGATCGAGTCGGCTATTGATCCCCTGATCAAGAATATATATACTTT-TATGGTCGGAAACGCTTCTTTCTGCCTGT-------------------TAC------------------CAATACACG--------GGTATACCAATCAAAA-CATTTTTAAAAATCTGCATATACATACTTTTCAAGGAATCTACT------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----
droSim2 2l:20747198-20747377 + -----ACGGACAGACGG----------------ACA-TGGCTAGATGGATTCGGCTATTGATC--CTGATCAAGAATATATATACTTTATATGGTCGGTAACGCTTCCTTTTGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGTATTCCCTACGACCCATGTTG-----------------------------------------------------------------------------------------------------------------------------------------------CCACGGCCACTCTAAAGCCCACTTTAACGAT-----------ATTTAAT-------------------------------------------------------------------------------------------------ATTT----
droSec2 scaffold_18:1231747-1231926 + -----ACGGACAGACGG----------------ACA-TGGCTAGATGGATTCGGCTATTGATC--CTGATCAAGAATATATATACTTTATATGGTCGGTAACGCTTCCTTCTGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGTATTCCCTACGACCCATGTTG-----------------------------------------------------------------------------------------------------------------------------------------------CCACGGCCCCTCTAAAGCCCACTTTAACGAT-----------ATTTAAT-------------------------------------------------------------------------------------------------ATTT----
droYak3 v2_chr2L_random_008:9059-9307 + GACGGACGGACAGACGG----------------ACA-TGGCCAAATCGACTCGGCTATAGATC--CTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGG-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTAGTATACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAAATACTT----------------------------------------------------------------------------------------------------------------------------------------T----AG-------CGATCAAATGGAATATTAAACTGAATCAGTTATT---GCAGAAAGAAGT---------------------AAATATAGCTTGG-----GATCCTATAATCTCAAGCGCGCCGAC
droEre2 scaffold_4929:21751050-21751254 - TTCATACGGACAGACGG----------------ACA-TGGCCAGTTCGACTCGGATATTGATC--CTGATCAAGAATATATATACTTTATATGGTTACATACATA-----------------------CATTCTTGTTAC------------------ATACTTTTC---------------------------------------------------------AATGAATCTAGT--ACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAACCGTT-------CTTGGACGCAACA--------------------------------------TTCAT-------------------------T--TATTG-------------------------------------------T-----------TTATTGTAT-------TTTATTACTGCAA-----------------------------------------------------------------------------CTCT----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TATAGACGGACAGATGG----------------ACA-TGGCTATATCACGTCGGCTGTTGAAT--CTGATTTAGAATATACATACTTTATGGAGTCGGAGATGCCTCCTTCTATGTCT---------------------------------------------GTTC---------------------------------------------------------ACCGTGTCCGGCATCTATATGGATCCGAGTTC-----------------------------------------------------------------------------------------------------------------------------------------------TTTGAGAGTCCCAAATGCTCATCTCTTAG-----------TTATCTAAT------CTTTATCGCTACACCTCTTGCCGCACAGATAATT---------------------TACTGTATTCGGGAACTTGATCTCAGCATTTCGAGTGCGACCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................CCTTCTATGTCT---------------------------------------------GTTC---------------------------------------------------------ACCGTGT..................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000200000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGAACTTGATCTCAGCATTTCGAG.........2711.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGATCTCAGCATTTCGAGC........2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................TCTATGTCT---------------------------------------------GTTC---------------------------------------------------------ACCGTGT..................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
................G----------------ACA-TGGCTATATCACGTCGGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCGCTACACCTCTTGCCGCACAG.......................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTCGGGAACTTGATCTCA...................2211.001000000000000000000000000000000010000000000000000000000000000000
........GACAGATGG----------------ACA-TGGCTATATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.081000000000000000000001000000000000000000000000000000000000000000
..........CAGATGG----------------ACA-TGGCTATATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.081000000000000000000000000000000000000000000000000000000000001000
........GACAGATGG----------------ACA-TGGCTATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071000001000000000000000000000000000000000000000000000000000000000
.................................................................................ATACTTTATGGAGTCGGAGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................TACTTTATGGAGTCGGAGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
..................................................................................TACTTTATGGAGTCGGAGATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000100000000000000000000000000000
droMoj3
GACGGACGGACAGACGG----------------ACA-GGGCTATATCGACTCAGCTCGTCGTG--CTGATCAAGAATATATATACTTTGTGGGGTCTGCCACGCCTCCTTCTGCCTGT-------------------TAC------------------ATAAATTT----------------------------------------------------------AACAAAACCATTATACCCTGAT---CT----GGGTT------------CAGGGT--TAACT--ATTGG-ATATTAGAAGCTATA---------------------------------------C---------CTCTTA-----TAGTACATT--TA--------------------------------------------------------------------------------------------------------TTT---------------------CGC---------------------------------TACA----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................TG--CTGATCAAGAATATATATACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
..........................................................TCGTG--CTGATCAAGAATATAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.............................................................TG--CTGATCAAGAATATATATACTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
droGri2
GA-------------------------------ACA-TGGCTATATCAACTCGGGTGGCTATG--CTGATCAAGATTATATATACTATGTCGGGTCGGAGATATCTCCTTCAATGCGT-------------------TAC------------------AAGAA-----------------------------CATATT-TGACATCCCAGCTCA--------TTCA-------------------------------------------------------------------------------------------------------T------ATACT--------TATCTTTC---------TCCAATATAGGTT----CTGTCGACCAATCACACCTTGGCTCAATT---------------GACAACTTGGTGTTTGTGTGA-------------------------------------------------------------------------------------------------GTTT----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GACGGACGGACGGACGG----------------ACA-TGGCGATTTGAACTCGTCTCGTCGTG--CTGATCAAGAATATATATACTTTATATGGTCGGAGATGCTTCCTTCTATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCAAAATTAATATACCCTTTTT------GC-----------------AAGGGT-ATAAAAATT------------------TA----TCGCTGCTTT-GT----TTT------CTC--------TATCTTTT---------TCTTGCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGATTTGAG------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................TT-GT----TTT------CTC--------TATCTTTT---------TCTTGCA....................................................................................................................................................................................25206.9013801120260
...........................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGATT......................26204.9098098000
.....................................................................................................................................................................................................................................................................................................................................................................................TAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCT...........................27201.55310170140
...............................................................................................................................................................................................................................................................................................................................TTT-GT----TTT------CTC--------TATCTTTT---------TCTTGCA....................................................................................................................................................................................26201.2024024000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGTTTTCTTGATTTGAG------------------26200.6513000130
.................................................................................................................................................................................................................................................................................................................................................................................TGCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTT...............................27200.5511011000
..................................................................................................................................................................................................................................................................................................................TA----TCGCTGCTTT-GT----TTT------CTC--------TATCTTT.....................................................................................................................................................................................................2740.50201010
...............................................................................................................................................................................................................................................................................................................................TTT-GT----TTT------CTC--------TATCTTTT---------TCTTG......................................................................................................................................................................................24200.5010010000
................................................................................................................ATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACC......................................................................................................................................................................................................................................................................................................................................21200.40808000
...................................................................................................................................................................................................................................................................................................................................................................................CATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTT...............................25200.40800080
...........................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTG.........................23200.30606000
............................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGATT......................25200.30606000
.......................................................................................TATATGGTCGGAGATGCTTCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.30600060
..................................................................................................................................................................................................................................................................................................................TA----TCGCTGCTTT-GT----TTT------CTC--------TATCTT......................................................................................................................................................................................................2640.25100010
.....................................................................................................................................................................................................................................................................................................................................................................................TAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTC............................26200.25505000
..................................................................................................................................................................................................................................................................................................................TA----TCGCTGCTTT-GT----TTT------CTC--------TATCT.......................................................................................................................................................................................................2540.25100010
........................................................................................................................................................................................................................................................................................................................TCGCTGCTTT-GT----TTT------CTC--------TATCTTT.....................................................................................................................................................................................................25200.25505000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------TGCTGCACTCGTTTTCTTGATTTG....................25200.20404000
...............................................................................................................TATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCAAAA..................................................................................................................................................................................................................................................................................................................................26200.20400040
............................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGA........................23200.20404000
...................................................................................ACTTTATATGGTCGGAGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
........................................................................................ATATGGTCGGAGATGCTTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300030
..............................................................................................................................................................................................................................................................................................................................................................................TCTTGCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCG.................................28200.15303000
......................................................................................................................................................................................................................................................................................................................................................................................AAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTT..............................23200.15303000
........................................................................................................................................................................................................................................................................................................................................................................................GATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTT..............................21200.15300030
.......................................................................................TATATGGTCGGAGATGCTTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15300030
............................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGAT.......................24200.10202000
.....................................................................................................................................................................TG---------------------------------------------------------ACCAAAATTAATATACCCTTTT...................................................................................................................................................................................................................................................................................................................24200.10202000
................................................................................................................................................................................................................................................................................................................................TT-GT----TTT------CTC--------TATCTTTT---------TCT........................................................................................................................................................................................21200.10202000
...........................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGATTT.....................27200.10202000
.........................................................................................................................................................................................................................................................................................................................................TTT------CTC--------TATCTTTT---------TCTTGCA....................................................................................................................................................................................21200.10201010
.........................................................................................................................................................................................................................................................................................................................................TTT------CTC--------TATCTTTT---------TCTTGCATAAG................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................TAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACT...................................19200.05100010
............................................................................................................................................................................................................................................................................................................................TGCTTT-GT----TTT------CTC--------TATCTTTT---------TCTT.......................................................................................................................................................................................26200.05100010
.........................................................................................................TCCTTCTATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................25200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................AAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTT.............................24200.05101000
.........................................................................................................TCCTTCTATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCA.....................................................................................................................................................................................................................................................................................................................................29200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---------------------TGCTGCACTCGTTTTCTTGATTTG....................26200.05100010
................................................................................................................ATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCAAAATTAA..............................................................................................................................................................................................................................................................................................................................29200.05101000
...............................................................................................................................................................................................................................................................................................................................TTT-GT----TTT------CTC--------TATCTTTT---------TCTTGCAT...................................................................................................................................................................................27200.05101000
...........................................................................................................CTTCTATGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACC......................................................................................................................................................................................................................................................................................................................................26200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................CATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTT..............................26200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................ATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTT..............................25200.05100010
..........................................................................................................................................................................................................................................................................................................................................TT------CTC--------TATCTTTT---------TCTTGCA....................................................................................................................................................................................20200.05101000
.............................................................................................GTCGGAGATGCTTCCTTCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110000
GACGGACGGACGGACGG----------------ACA-TGGCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110000
..................................................................................................................................................................................................................................................................................................................................................................................GCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTT...............................26200.05101000
.........................................................................................................................................................................................................................................................................................................................CGCTGCTTT-GT----TTT------CTC--------TATCTTT.....................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................CTGCTTT-GT----TTT------CTC--------TATCTTTT---------TC.........................................................................................................................................................................................25200.05100010
.............................................................................................................................................................................................................................................................................................................................GCTTT-GT----TTT------CTC--------TATCTTTT---------TCTG.......................................................................................................................................................................................25200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGTTTTCTTGATTTGA...................25200.05101000
....................................................................................................................................................................................................................................................................................................................................................................T---------TCTTGCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCA.....................................25200.05101000
.....ACGGACGGACGG----------------ACA-TGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
...............GG----------------ACA-TGGCGATTTGAACTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
..............................................................................................................................................................................................................................................................................................................................................................................TCTTGCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTG.......................................22200.05110000
................................................................................................................................................................................................................................................................................................................................TT-GT----TTT------CTC--------TATCTTTT---------TCTTGCAT...................................................................................................................................................................................26200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCT...........................21200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGATTTG....................28200.05101000
..............................................................................................................................................................................................................................................................................................................................CTTT-GT----TTT------CTC--------TATCTTTT---------TCT........................................................................................................................................................................................23200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTG.........................24200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGA........................24200.05100100
.........................................................................................................................................................................................................................................................................................................................................................................................ATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGT................................18200.05101000
...............................................................................ATATACTTTATATGGTCGGAGATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
.....................................................................................................................................................................................................................................................................................................................................................................................TAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCAC....................................18200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGTTTTCTTGAT.......................26200.05100010
........................................................................................................................................................................................................................................................................................................................TCGCTGCTTT-GT----TTT------CTC--------TATCTTTT---------...........................................................................................................................................................................................26200.05100010
...............................................................................................................................................................................................................................................................................................................................................................TCTTTT---------TCTTGCATAAGATT.............................................................................................................................................................................20200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................ATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TGCTGCACTCGT................................23200.05100010
.................................................................................ATACTTTATATGGTCGGAGATGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................................................................................................................................................................................................................................................................................................TGCTTT-GT----TTT------CTC--------TATCTTTT---------...........................................................................................................................................................................................22200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................TCTTGCATAAGATTA---------------------------------------------------------------------------------------------------------TT---------------------TG..........................................19200.05101000
dp5
GAAGGACAGACAGACAG----------------ACA-TGGCTCAATCGACTCGGCTGTTGATG--CTGATCAAGAATATATATACTTTATGGTGTCGGAAACGCCTCCTTTTTGACCTTACACACATCCA--------------------------------TTTTC-------------------------------------------------------ACCACAAATCTTATATACCCCAATACTCATTTTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATC----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................TG--CTGATCAAGAATATATATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................232014.50290000000029000
.............................................................TG--CTGATCAAGAATATATATACTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25202.505000000005000
..................................CA-TGGCTCAATCGACTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4080800000000
...................................................................GATCAAGAATATATATACTTTATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.3060600000000
...........................................AATCGACTCGGCTGTTGATG--C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.2020200000000
.............................................TCGACTCGGCTGTTGATG--CTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.1930300000000
........................................CTCAATCGACTCGGCTGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.1720100001000
............................................................ATG--CTGATCAAGAATATATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000003000
.....ACAGACAGACAG----------------ACA-TGGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530100100010
........GACAGACAG----------------ACA-TGGCTCAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530300000000
.............................................................TG--CTGATCAAGAATATATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000003000
......................................................CTGTTGATG--CTGATCAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.1320100010000
...............................................................................ATATACTTTATGGTGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310100000000
............................................ATCGACTCGGCTGTTGATG--C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.1121100000000
............................................ATCGACTCGGCTGTTGATG--CT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.1120200000000
..........................................CAATCGACTCGGCTGTTGATG--CTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.1010010000000
..........................................................TGATG--CTGATCAAGAATATAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000020000
............................................................................................................................CATCCA--------------------------------TTTTC-------------------------------------------------------ACCACAAATC.................................................................................................................................................................................................................................................................................................................................21200.1020000000020
...................................................CGGCTGTTGATG--CTGATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0810100000000
..........................................CAATCGACTCGGCTGTTGATG--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810100000000
........................................CTCAATCGACTCGGCTGTTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810100000000
....................................................GGCTGTTGATG--CTGATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.0810100000000
......................................................CTGTTGATG--CTGATCAAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710000000010
....................................................GGCTGTTGATG--CTGATCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0710100000000
..............................................CGACTCGGCTGTTGATG--CTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.0610100000000
.....................................................GCTGTTGATG--CTGATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.0610100000000
...............................................GACTCGGCTGTTGATG--CTGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.0610100000000
...............................................GACTCGGCTGTTGATG--CTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.0610100000000
...................................................CGGCTGTTGATG--CTGATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.0610100000000
.......................................................TGTTGATG--CTGATCAAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.0610000010000
......CAGACAGACAG----------------ACA-TGGCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
....GACAGACAGACAG----------------ACA-TGGCTCAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
......................................................................................................................TACACACATCCA--------------------------------TTTTC-------------------------------------------------------ACCACAA....................................................................................................................................................................................................................................................................................................................................24200.0510010000000
.....................................TGGCTCAATCGACTCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000010
.......................................................TGTTGATG--CTGATCAAGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
..............................................................G--CTGATCAAGAATATATATACTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000100
...................................A-TGGCTCAATCGACTCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000000
....GACAGACAGACAG----------------ACA-TGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000010
...........AGACAG----------------ACA-TGGCTCAATCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.................................ACA-TGGCTCAATCGACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.......AGACAGACAG----------------ACA-TGGCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
GACAGACGGACAGACAG----------------ACA-GGGCTCAATCGACTCGGCTATTGATG--CTGATCAAGAATATATATACTTAATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCA--------------------------------TTTTC-------------------------------------------------------ACCACAAATCTAATATACCCCAATACTCATTTTGAGTA------------ATCAGTTAACA--------------------------------AAGTTTTTCTTAACT------ATTTTTGAAGTTTACCT---------------------------ACTGTTTTGATCAG----------------------------------------------------------------------------------------------------------------------------------CCTGACCTTAGCT-TTGAAGTACAA----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................CAATCGACTCGGCTATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.357000007
...................................................................................................................CGTTACACACATCCA--------------------------------TTTTC-------------------------------------------------------ACCA.......................................................................................................................................................................................................................................................................................................................................24200.204040000
....................................................................................................................GTTACACACATCCA--------------------------------TTTTC-------------------------------------------------------ACCACA.....................................................................................................................................................................................................................................................................................................................................25200.153030000
.........................................................................................................TCCTTCTGGACGTTACACACATCCA--------------------------------TT.....................................................................................................................................................................................................................................................................................................................................................................................................27200.153030000
.............................................................TG--CTGATCAAGAATATATATACTTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.071010000
.............................................................TG--CTGATCAAGAATATATATACTTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
........GACAGACAG----------------ACA-GGGCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
droAna3
GA--------CAGACGG----------------ACA-TGCTTATATCGACTCAGGAGGTGATC--CTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTTCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCAAAATTATAATACCTTCTT--------C-----------------AAGGGT-ATAAAAATG--------------------------------------------------------------------------------------------------------------------------------------------ACATCTAACAGTTACCATAT-------------------------------------------------------------------------------------------------CTTT----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................TTATATCGACTCAGGAGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.459009000
.............................................TCGACTCAGGAGGTGATC--CT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.204400000
GA--------CAGACGG----------------ACA-TGCTTATATCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.153030000
.................................................................................ATACTTTATAGGGTCGGAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153030000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAACAGTTACCATAT-------------------------------------------------------------------------------------------------CTT.....21170.122200000
..........................................................................................................TCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACC......................................................................................................................................................................................................................................................................................................................................27200.102200000
.........................................................................................................TTCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------A........................................................................................................................................................................................................................................................................................................................................26200.102200000
.........................................................................................................TTCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................25200.102200000
.........................................................................................................TTCTTCACTGCGT-------------------TGC------------------ACACT......................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
..................................................................................TACTTTATAGGGTCGGAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102020000
.........................................................................................................TTCTTCACTGCGT-------------------TGC------------------ACAC.......................................................................................................................................................................................................................................................................................................................................................................................................20200.102020000
..........................................................................................................TCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------AC.......................................................................................................................................................................................................................................................................................................................................26200.102200000
..........................................................................................................TCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------A........................................................................................................................................................................................................................................................................................................................................25200.102020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAACAGTTACCATAT-------------------------------------------------------------------------------------------------CTTT----21180.061100000
.................................................................................................GAGATGTCTTCTTCACTGCGT-------------------TGC------------------ACAC.......................................................................................................................................................................................................................................................................................................................................................................................................28200.051001000
..................................................................TGATCAAGAATATATATACTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..............................................................................................................................................................ACACTTTTG---------------------------------------------------------ACCAAAATTATAATACCT.......................................................................................................................................................................................................................................................................................................................27200.051010000
.........................................................................................................TTCTTCACTGCGT-------------------TGC------------------ACACTTTT...................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..................................................................................................AGATGTCTTCTTCACTGCGT-------------------TGC------------------AC.........................................................................................................................................................................................................................................................................................................................................................................................................25200.051000001
..................................................................................TACTTTATAGGGTCGGAGATGTCTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.......................................................................................TATAGGGTCGGAGATGTCTTCTTCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000
.....................................................................................TTTATAGGGTCGGAGATGTCTTCTTCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051100000
...........................................................................................................CTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------A........................................................................................................................................................................................................................................................................................................................................24200.051010000
................G----------------ACA-TGCTTATATCGACTCAGGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000100
..............CGG----------------ACA-TGCTTATATCGACTCAGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
........................................................................................ATAGGGTCGGAGATGTCTTCTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.............................................................................................................TCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCA.....................................................................................................................................................................................................................................................................................................................................25200.051001000
.......................................CTTATATCGACTCAGGAGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
............................................................................................................TTCACTGCGT-------------------TGC------------------ACACTTT....................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
...............................................................................................................................................................CACTTTTG---------------------------------------------------------ACCAAAATTATAATACCTT......................................................................................................................................................................................................................................................................................................................27200.051010000
.........................................................................................TAGGGTCGGAGATGTCTTCTTCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.....................................................................................................TGTCTTCTTCACTGCGT-------------------TGC------------------ACA........................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.........................................................................................................TTCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------AG.......................................................................................................................................................................................................................................................................................................................................27200.051100000
.........................................................................................TAGGGTCGGAGATGTCTTCTTCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
...............................................................................................CGGAGATGTCTTCTTCACTGCGT-------------------TGC------------------...........................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
...............................................................................................................ACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------ACCAAA...................................................................................................................................................................................................................................................................................................................................25200.051100000
.....................................TGCTTATATCGACTCAGGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
droBip1
GACAGACGGACAGACGGACAGACGGACAGACGGACA-TGCTCATATCAACTCAGGAGGTGATC--CTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGT-------------------TGC------------------ACACTTTTG---------------------------------------------------------GACAAAATTATAATACCCTCT--------GC-----------------AAGGGT-ATAAAAATAA--GCT---------AG-------------CTTTTCT----T------ATTTTTAACGTTGACCTTT-------------TACCACAAA--TATTG------------------------------------------------------------------------------------------------------TT---------------------TAT--------------TAATTTTA-----------GAAA----SizeHit CountTotal NormTotal
No Reads
droKik1
G---------------G----------------ACA-TGGCTAAAACGATTCGGCTGTTGATG--CTGATCAAGAATATATATGATTTATGGGGTCGGAAAGGACTCCTTCACTGCCT-------------------GGC------------------AAACTTCCGACTGATAATATATAGCCTCCAAGGATATAAT-AAAAATCCGCACACAAATGCTTCT--GG----------------------------------------------------------------GCT---------TG-------------TT---CT----TTT------------------------------------------------------------------------------------------------------------------CT------CTTTATTGATACACTTATAGCATAGCATAT--------------------------AG---------------------------------TATA----SizeHit CountTotal NormTotal
No Reads
droFic1
GACAGACGGACAGACGTATG---TT--------ACA-GACGTATTCCGACTCTGCTCGTGATG--CTGATCAAGAATATATATAATTTATGGGGTCTGAGGTGTCCCCTTCACTGCGT-------------------TGC------------------AAACATCTG---------------------------------------------------------CCTGAATTTATATTATCCTC-TGCTCT--GC-----------------AAGGGT-ATAAAAACAC----------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------ATCT----SizeHit CountTotal NormTotal
No Reads
droEle1
TTTGGACAGAGAGACGG----------------AAA-TGGGTAGATCGACTTGGCTATTGATC--CTGATCAATAATATATATACTTTATAGGGTTGGAAACGCTTCCTTCTAC--------------------------------------------------------------------------------------------------------------------------------------TCT--ACGATTA------------ACGGGT-ATTACAAGT-----------------ATAATAATTCCCAAATT-AT----TTTCTCTATTCTTGACTTC---------CTCTTC-----TCGCACAGG--TA---------------------------------------------------------------------------------------------------------TT---------------------TCC---------------------------------TGTA----SizeHit CountTotal NormTotal
No Reads
droRho1
GA------------CGG----------------ACA-TGACTAGATTGACTCTCCTGGTGATG--CTGATCAAGAATATATATACTTTATAGGGTCGGAAATGTCTCCTTCACTGCGT-------------------TGC------------------AAACCTTTT---------------------------------------------------------TATGAAATTAAAATACCCTCT--------GC-----------------AAGGGT-ACAAAAATACGGGCA---------TGTTA----ATGATGTTTT-TT----TCG--------------GTGTACATTTCCGCCGCACTTCCTG-------CTA----------------------------------------------CACGGTGCACTGTGTGT------------------------------------------------------------------AG--------------GA-----------------ATTT----SizeHit CountTotal NormTotal
No Reads
droBia1
-----ACGGACAGACGG----------------ACAATGGCTAG----------------ATC--CTGATCAAGAATATATATACTTTATGGGGTCGGAAGCGCTTCCTTCTAAATAT-------GTTTGT------TT-TTGTTTCGGTGTTTATACATAAATGC------------------------------------------------------------------------------------AAGTGT----TATGTAGTGTTG---------------------------------ATGATCAACCCAAAGTT-AT----GATATCAA-----------------------------------------------------------------------------------------------------------------------------------CTCTTGTGACGGAAATGATTTATCTCATAAATGAATACCCTTCCTAAATTTTTTAATTTAGTTGCAGCGTGCCGAATGTGA----SizeHit CountTotal NormTotal
No Reads
droTak1
GACAGACGGACAGACGG----------------ACA-TGGCTAGATCGACTCGGCTAGTGCCC--CTGATCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTACCTGT-------------------TAC------------------ATACTTTTG---------------------------------------------------------CACGAATCTAATATACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAAAAATCT----------------------------------------------------------------------------------------------------------------------------------------T----AG-------CGGTCAAAT-------------------------------------------------------------------------------------------------TTTT----SizeHit CountTotal NormTotal
No Reads
droEug1
GACGGACGGACAGACGG----------------ACA-TGGCTCAATCGACTTCGCTATTGATC--CTGATCAAAAATATATATACTTTATAGGGTCGCAAAAGCTTCCTTCTATCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTAGTATACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAAATATG-----------------------------------------T------ATGTT--------TGTATTTA---------TCC-ATGTCATTT----TTTCTGCTCGG---------------------------------------------------------------------TAGAGCTCTTGCTTTAAAGATA------------------------------------------------------------CTTT----SizeHit CountTotal NormTotal
No Reads
dm3
GGCAGACAGACGGACGG----------------GCA-GGGCCAGATCGAGTCGGCTATTGATCCCCTGATCAAGAATATATATACTTT-TATGGTCGGAAACGCTTCTTTCTGCCTGT-------------------TAC------------------CAATACACG--------GGTATACCAATCAAAA-CATTTTTAAAAATCTGCATATACATACTTTTCAAGGAATCTACT------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................CCCTGATCAAGAATATATATACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2435.33160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000103000000000000000000000000000000000000000000000000000000000000000010300030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...............................................................CCCTGATCAAGAATATATATACTTT-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2533.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000040100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TATGGTCGGAAACGCTTCTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2253.00150000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010010000000000000000000000000000000000000000000000000100000000000200010000000100000100100000000000200020
.........................................................................................TATGGTCGGAAACGCTTCTTTCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2542.2590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000040000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
.........................................................................................TATGGTCGGAAACGCTTCTTTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2441.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
................G----------------GCA-GGGCCAGATCGAGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................ATATACTTT-TATGGTCGGAAACGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................CGAGTCGGCTATTGATCCCCTGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TCTTTCTGCCTGT-------------------TAC------------------CAATACACG--------GG........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CTTT-TATGGTCGGAAACGCTTCTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................GCA-GGGCCAGATCGAGTCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................AGTCGGCTATTGATCCCCTGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TATATACTTT-TATGGTCGGAAACGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GTCGGCTATTGATCCCCTGATCAAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TATATACTTT-TATGGTCGGAAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TACTTT-TATGGTCGGAAACGCTTCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TATGGTCGGAAACGCTTCTTTCTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TATGGTCGGAAACGCTTCTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.5740000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACAGACGGACGG----------------GCA-GGGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................TATACTTT-TATGGTCGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTT-TATGGTCGGAAACGCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.............ACGG----------------GCA-GGGCCAGATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................ATCGAGTCGGCTATTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CCCTGATCAAGAATATATATACTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CTGATCAAGAATATATATACTTT-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CGCTTCTTTCTGCCTGT-------------------................................................................................................................................................................................................................................................................................................................................................................................................................................1750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TATGGTCGGAAACGCTTCTTTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ATGGTCGGAAACGCTTCTTTCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AACGCTTCTTTCTGCCTGT-------------------................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................CCTGATCAAGAATATATATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ATGGTCGGAAACGCTTCTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................TGGTCGGAAACGCTTCTTTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CCCTGATCAAGAATATAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................TCAAGAATATATATACTTT-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAGAATATATATACTTT-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.1220000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TCGGAAACGCTTCTTTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TATGGTCGGAAACGCTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CATACTTTTCAAGGAATCT................................................................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TATGGTCGGAAACGCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................CTGATCAAGAATATATATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-----ACGGACAGACGG----------------ACA-TGGCTAGATGGATTCGGCTATTGATC--CTGATCAAGAATATATATACTTTATATGGTCGGTAACGCTTCCTTTTGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGTATTCCCTACGACCCATGTTG-----------------------------------------------------------------------------------------------------------------------------------------------CCACGGCCACTCTAAAGCCCACTTTAACGAT-----------ATTTAAT-------------------------------------------------------------------------------------------------ATTT----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................GAATATATATACTTTATATGGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000000000012000
...........................................................................ATATATATACTTTATATGGTCGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000000000021000
...........................................................................ATATATATACTTTATATGGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300100020000000000
.........................................................................GAATATATATACTTTATATGGTCGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000000011000
...............................................................................................................TGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAA...................................................................................................................................................................................................................................................................................................................................25201.6032000000032000000000
........................................................ATTGATC--CTGATCAAGAATATATATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28201.3026000000771200000000
.........................................................................................................................................TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGTA............................................................................................................................................................................................................................................................................................................................2541.00400000000310000000
...........................................................................ATATATATACTTTATATGGTCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2531.00300000000000021000
.........................................................................GAATATATATACTTTATATGGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.9519000000020330110000
..................................................TCGGCTATTGATC--CTGATCAAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.7515000000000015000000
...........................................................................ATATATATACTTTATATGGTCGGTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.75300000000000030000
.........................................................................GAATATATATACTTTATATGGTCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.67200000000000020000
...........................................................................ATATATATACTTTATATGGTCGGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.67200200000000000000
........................................................ATTGATC--CTGATCAAGAATATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.6012000000001200000000
........................................................ATTGATC--CTGATCAAGAATATATATACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.551100000004070000000
........................................................ATTGATC--CTGATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.35700000070000000000
...........................................................................ATATATATACTTTATATGGTCGGTAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.33300000000000030000
...........................................................................ATATATATACTTTATATGGTCGGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.33200000000000020000
..........................................................................................................................................AC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGT.............................................................................................................................................................................................................................................................................................................................2360.33200000000002000000
............GACGG----------------ACA-TGGCTAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.30600000006000000000
.....................................................................................................................T-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGG..............................................................................................................................................................................................................................................................................................................................2470.29200000000110000000
.................................................TTCGGCTATTGATC--CTGATCAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.25500000010220000000
.....................................................................................................................T-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGT.............................................................................................................................................................................................................................................................................................................................2540.25100000000100000000
.............................................................TC--CTGATCAAGAATATATATACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25500000000050000000
.....................................................................................................................T-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGTA............................................................................................................................................................................................................................................................................................................................2640.25100000000100000000
..................................................TCGGCTATTGATC--CTGATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.25500000000104000000
...........................................................................ATATATATACTTTATATGGTCGGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000000010000
...............................................................................................................TGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAAT..................................................................................................................................................................................................................................................................................................................................26200.20400000000040000000
...........................................................................ATATATATACTTTATATGGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.20400000000000031000
.............................................................................ATATATACTTTATATGGTCGGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.20200000000000002000
..........CAGACGG----------------ACA-TGGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.20400000000004000000
..........................................................................................................................................AC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGTA............................................................................................................................................................................................................................................................................................................................2460.17100000000000001000
..............................................................................................................TTGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAA...................................................................................................................................................................................................................................................................................................................................26120.17200000020000000000
.................................................TTCGGCTATTGATC--CTGATCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15300100002000000000
...............................................................................................................TGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGA....................................................................................................................................................................................................................................................................................................................................24200.15300000000300000000
..................................................TCGGCTATTGATC--CTGATCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15300000000012000000
..............................................................................................................TTGCCTGT-------------------TAC------------------ATACT......................................................................................................................................................................................................................................................................................................................................................................................................16200.15300000012000000000
.................................................TTCGGCTATTGATC--CTGATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300000011001000000
.....................................................GCTATTGATC--CTGATCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.15300000020001000000
.........................................................................................................TCCTTTTGCCTGT-------------------TAC------------------ATACT......................................................................................................................................................................................................................................................................................................................................................................................................21160.13200000010100000000
..............................................................................................................TTGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCT................................................................................................................................................................................................................................................................................................................................2990.11100000010000000000
.....ACGGACAGACGG----------------ACA-TGGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200010000001000000
.....ACGGACAGACGG----------------ACA-TGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200000000000020000
.................................................TTCGGCTATTGATC--CTGATCAAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200000001010000000
..................................................TCGGCTATTGATC--CTGATCAAGAATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000002000000
.................................................TTCGGCTATTGATC--CTGATCAAGAATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000020000000
......CGGACAGACGG----------------ACA-TGGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200000000000002000
..........CAGACGG----------------ACA-TGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
.........................................................TTGATC--CTGATCAAGAATATATATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000020000000
..........................................................TGATC--CTGATCAAGAATATATATACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000020000000
.............................................................TC--CTGATCAAGAATATATATACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000002000000000
...............................................................................................................................................................TACTTTTC---------------------------------------------------------AACGAATCTGGTA............................................................................................................................................................................................................................................................................................................................21110.09100000000100000000
...................................................................................................................................................................TTTC---------------------------------------------------------AACGAATCTGGTA............................................................................................................................................................................................................................................................................................................................17130.08100000001000000000
...............................................................................ATATACTTTATATGGTCGGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.07100000010000000000
................................................ATTCGGCTATTGATC--CTGATCAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.07100000000100000000
...............................................GATTCGGCTATTGATC--CTGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.06101000000000000000
...........................................................................ATATATATACTTTATATGGTCGGTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................27170.06100000000000010000
.........................................................................................................TCCTTTTGCCTGT-------------------TAC------------------AT.........................................................................................................................................................................................................................................................................................................................................................................................................18180.06100000010000000000
..........................................................................................................CCTTTTGCCTGT-------------------TAC------------------ATACT......................................................................................................................................................................................................................................................................................................................................................................................................20180.06100000010000000000
.......................................................TATTGATC--CTGATCAAGAATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
.........ACAGACGG----------------ACA-TGGCTAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
...................................................CGGCTATTGATC--CTGATCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000100000000
.............................................................TC--CTGATCAAGAATATATATACTTTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
..................................................TCGGCTATTGATC--CTGATCAAGAATATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.05100000010000000000
....................................................GGCTATTGATC--CTGATCAAGAATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000000000
.......GGACAGACGG----------------ACA-TGGCTAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
........................................................ATTGATC--CTGATCAAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000010000000
.......GGACAGACGG----------------ACA-TGGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
.........................................................................GAATATATATACTTTATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000010000
.....................................................GCTATTGATC--CTGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
.....ACGGACAGACGG----------------ACA-TGGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000000000
.............................................................TC--CTGATCAAGAATATATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000010000000
..................................................TCGGCTATTGATC--CTGATCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000100000
...................................................................................................................TGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAA...................................................................................................................................................................................................................................................................................................................................21200.05100000000010000000
..................................................................................................................CTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCT................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
..........CAGACGG----------------ACA-TGGCTAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000000001000
.............................................................................................................TTTGCCTGT-------------------TAC------------------ATACT......................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000010000000000
..................................................TCGGCTATTGATC--CTGATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000100000000
............GACGG----------------ACA-TGGCTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
...................................................CGGCTATTGATC--CTGATCAAGAATATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000010000000000
.............................................................TC--CTGATCAAGAATATATATACTTTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000010000000
..................................................................................................................CTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATC.................................................................................................................................................................................................................................................................................................................................24200.05100000000100000000
.....ACGGACAGACGG----------------ACA-TGGCTAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000001000000
......CGGACAGACGG----------------ACA-TGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
droSec2
-----ACGGACAGACGG----------------ACA-TGGCTAGATGGATTCGGCTATTGATC--CTGATCAAGAATATATATACTTTATATGGTCGGTAACGCTTCCTTCTGCCTGT-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTGGTATTCCCTACGACCCATGTTG-----------------------------------------------------------------------------------------------------------------------------------------------CCACGGCCCCTCTAAAGCCCACTTTAACGAT-----------ATTTAAT-------------------------------------------------------------------------------------------------ATTT----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................CTAGATGGATTCGGCTATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
........................................................................................ATATGGTCGGTAACGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
...........................................................................ATATATATACTTTATATGGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020020
..........................................................TGATC--CTGATCAAGAATATATATACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
...................................................CGGCTATTGATC--CTGATCAAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
...........................................................................ATATATATACTTTATATGGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
droYak3
GACGGACGGACAGACGG----------------ACA-TGGCCAAATCGACTCGGCTATAGATC--CTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGG-------------------TAC------------------ATACTTTTC---------------------------------------------------------AACGAATCTAGTATACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAAATACTT----------------------------------------------------------------------------------------------------------------------------------------T----AG-------CGATCAAATGGAATATTAAACTGAATCAGTTATT---GCAGAAAGAAGT---------------------AAATATAGCTTGG-----GATCCTATAATCTCAAGCGCGCCGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................TCGGAAACGCTTCCTTCTGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.45900900000000
..............................................................................................TCGGAAACGCTTCCTTCTGCCTGG-------------------................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000000000
........................................................................................................TTCCTTCTGCCTGG-------------------TAC------------------ATACTTTTC---------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................2640.25101000000000
........................................................................................................TTCCTTCTGCCTGG-------------------TAC------------------ATACTTTT...................................................................................................................................................................................................................................................................................................................................................................................................2540.25100100000000
...........................................................................................TGGTCGGAAACGCTTCCTTCTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.20400400000000
GACGGACGGACAGACGG----------------ACA-TGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.20400040000000
..................................................................................................................................................................................................................................................TTTTACTCT--ACGAGTA------------ACGGG....................................................................................................................................................................................................................................................................................21200.15303000000000
.....................................................................................................................................................................................................................................................TACTCT--ACGAGTA------------ACGGGT-ATAAATAC..........................................................................................................................................................................................................................................................................27200.05100100000000
....GACGGACAGACGG----------------ACA-TGGCCAAATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
...................................................................................ACTTTATATGGTCGGAAACGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000
...............GG----------------ACA-TGGCCAAATCGACTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
TTCATACGGACAGACGG----------------ACA-TGGCCAGTTCGACTCGGATATTGATC--CTGATCAAGAATATATATACTTTATATGGTTACATACATA-----------------------CATTCTTGTTAC------------------ATACTTTTC---------------------------------------------------------AATGAATCTAGT--ACCCTTTTACTCT--ACGAGTA------------ACGGGT-ATAACCGTT-------CTTGGACGCAACA--------------------------------------TTCAT-------------------------T--TATTG-------------------------------------------T-----------TTATTGTAT-------TTTATTACTGCAA-----------------------------------------------------------------------------CTCT----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
TTCATACGGACAGACGG----------------ACA-TGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000

Generated: 05/17/2015 at 04:57 AM